organic compounds
Low-temperature redetermination of 4-chloro-2-[tris(hydroxymethyl)methyliminomethyl]phenol as zwitterionic 4-chloro-2-[tris(hydroxymethyl)methyliminiomethyl]phenolate
aDepartment of Chemistry, University of Malaya, 50603 Kuala Lumpur, Malaysia
*Correspondence e-mail: seikweng@um.edu.my
The title Schiff base, C11H14ClNO4, originally refined as a neutral molecule [Chumakov, Antosyak, Mazus, Tsapkov & Samus (2000), Crystallogr. Rep. 45, 945–950], is interpreted as a zwitterionic compound. There are two independent in the Five of the six hydroxy groups of the –CH2OH fragments are disordered. In one zwitterion, two are disordered over three sites [0.53 (1):0.33 (1):0.14 (1) and 0.65 (1):0.18 (1):0.17 (1)] and the third over two sites [0.66 (1):0.34 (1)]. In the second zwitterion, two are disordered over two sites [0.84 (1):0.16 (1) and 0.83 (1):0.17 (1)] and the third hydroxy group is ordered.
Related literature
The room-temperature 2OH groups) refined to 0.072, see: Chumakov et al. (2000). The unsubstituted parent Schiff base is also a zwitterion; its structure has been determined several times, see: Asgedom et al. (1996); Odabas˛ogˇlu et al. (2003); Tatar et al. (2005); Zhang et al. (2000).
was interpreted as a neutral molecule; the disordered structure (the disorder confined to the hydroxy part of one of the six –CHExperimental
Crystal data
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Data collection: APEX2 (Bruker, 2007); cell SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2008).
Supporting information
10.1107/S160053680803866X/tk2330sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S160053680803866X/tk2330Isup2.hkl
The compound was synthesized from the reaction of 5-chlorosalicylaldehyde and tris(hydroxymethyl)aminomethane (Chumakov et al., 2000), and was recrystallized from ethanol.
Five of the six hydroxy groups of the –CH2OH fragments are disordered. In one zwitterion, two are disordered over three sites [0.53 (1): 0.33: 0.14] and the third over two sites [0.65 (1): 0.18: 0.17]. In the second zwitterion, two are disordered over two sites [0.84 (1): 0.16 and 0.83 (1): 0.17] and the third is ordered. For each disordered –CH2OH fragment, the C–O distances (of the unprimed and primed atoms) were restrained to within 0.01 Å. The temperature factors of the primed atom(s) were restrained to those of the unprimed ones.
Carbon- and oxygen-bound hydrogen atoms were placed at calculated positions (C–H 0.95–0.99, O–H 0.84 Å) and were treated as riding on their parent atoms, with U(H) set to 1.2–1.5 times Ueq(C,O). The iminium hydrogen atoms were located in a difference Fourier map, and were refined with a distance restraint of N–H 0.88±0.01 Å; their temperature factors were freely refined.
Owing to the disorder, hydrogen bonding interactions involving the hydroxyl groups were not computed.
Data collection: APEX2 (Bruker, 2007); cell
APEX2 (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: pubCIF (Westrip, 2008).C11H14ClNO4 | Z = 4 |
Mr = 259.68 | F(000) = 544 |
Triclinic, P1 | Dx = 1.471 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 7.0174 (1) Å | Cell parameters from 6864 reflections |
b = 10.1935 (1) Å | θ = 2.2–28.3° |
c = 16.7234 (2) Å | µ = 0.33 mm−1 |
α = 79.520 (1)° | T = 100 K |
β = 89.031 (1)° | Prism, yellow |
γ = 85.258 (1)° | 0.30 × 0.20 × 0.05 mm |
V = 1172.27 (2) Å3 |
Bruker SMART APEX diffractometer | 5361 independent reflections |
Radiation source: fine-focus sealed tube | 4771 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.018 |
ω scans | θmax = 27.5°, θmin = 1.2° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −9→9 |
Tmin = 0.908, Tmax = 0.984 | k = −13→13 |
11241 measured reflections | l = −21→21 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.042 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.117 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.01 | w = 1/[σ2(Fo2) + (0.0573P)2 + 1.0948P] where P = (Fo2 + 2Fc2)/3 |
5361 reflections | (Δ/σ)max = 0.001 |
360 parameters | Δρmax = 0.41 e Å−3 |
47 restraints | Δρmin = −0.74 e Å−3 |
C11H14ClNO4 | γ = 85.258 (1)° |
Mr = 259.68 | V = 1172.27 (2) Å3 |
Triclinic, P1 | Z = 4 |
a = 7.0174 (1) Å | Mo Kα radiation |
b = 10.1935 (1) Å | µ = 0.33 mm−1 |
c = 16.7234 (2) Å | T = 100 K |
α = 79.520 (1)° | 0.30 × 0.20 × 0.05 mm |
β = 89.031 (1)° |
Bruker SMART APEX diffractometer | 5361 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 4771 reflections with I > 2σ(I) |
Tmin = 0.908, Tmax = 0.984 | Rint = 0.018 |
11241 measured reflections |
R[F2 > 2σ(F2)] = 0.042 | 47 restraints |
wR(F2) = 0.117 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.01 | Δρmax = 0.41 e Å−3 |
5361 reflections | Δρmin = −0.74 e Å−3 |
360 parameters |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Cl1 | 0.74259 (7) | 0.67565 (5) | 0.56473 (3) | 0.03176 (13) | |
Cl2 | 0.23984 (7) | 0.77985 (6) | 0.56151 (3) | 0.03809 (15) | |
O1 | 0.54240 (19) | 0.73990 (13) | 0.21969 (8) | 0.0239 (3) | |
O5 | 0.03446 (18) | 0.95420 (12) | 0.21807 (8) | 0.0246 (3) | |
O2 | 0.1961 (3) | 1.1785 (2) | 0.17629 (14) | 0.0204 (4) | 0.535 (2) |
H2 | 0.1471 | 1.1063 | 0.1939 | 0.031* | 0.535 (2) |
O2' | 0.2372 (5) | 1.0814 (4) | 0.0932 (2) | 0.0204 (4) | 0.328 (3) |
H2' | 0.1688 | 1.0397 | 0.1292 | 0.031* | 0.328 (3) |
O2" | 0.3318 (13) | 1.2743 (9) | 0.0813 (5) | 0.0204 (4) | 0.137 (3) |
H2" | 0.4077 | 1.3189 | 0.1015 | 0.031* | 0.137 (3) |
O3 | 0.6388 (3) | 0.98149 (19) | 0.05581 (12) | 0.0256 (4) | 0.650 (3) |
H3 | 0.7445 | 0.9411 | 0.0476 | 0.038* | 0.650 (3) |
O3' | 0.8488 (9) | 1.1295 (10) | 0.0883 (6) | 0.0256 (4) | 0.183 (6) |
H3' | 0.8968 | 1.0856 | 0.1317 | 0.038* | 0.183 (6) |
O3" | 0.8481 (9) | 1.0984 (11) | 0.0690 (7) | 0.0256 (4) | 0.166 (6) |
H3" | 0.8995 | 1.0227 | 0.0894 | 0.038* | 0.166 (6) |
O4 | 0.6047 (3) | 1.35087 (18) | 0.13329 (12) | 0.0254 (5) | 0.660 (5) |
H4 | 0.5375 | 1.4132 | 0.1492 | 0.038* | 0.660 (5) |
O4' | 0.5213 (6) | 1.2777 (4) | 0.2551 (2) | 0.0254 (5) | 0.34 |
H4' | 0.4631 | 1.3531 | 0.2394 | 0.038* | 0.340 (5) |
O6 | 0.3862 (2) | 0.54296 (15) | 0.17552 (10) | 0.0241 (5) | 0.835 (6) |
H6 | 0.4403 | 0.6031 | 0.1925 | 0.036* | 0.835 (6) |
O6' | 0.2819 (11) | 0.5226 (7) | 0.0539 (5) | 0.0241 (5) | 0.16 |
H6' | 0.1780 | 0.4913 | 0.0462 | 0.036* | 0.165 (6) |
O7 | −0.0249 (2) | 0.40172 (15) | 0.12281 (10) | 0.0251 (5) | 0.831 (6) |
H7 | 0.0171 | 0.3226 | 0.1412 | 0.038* | 0.831 (6) |
O7' | 0.1139 (11) | 0.3978 (7) | 0.2403 (4) | 0.0251 (5) | 0.17 |
H7' | 0.2264 | 0.4154 | 0.2276 | 0.038* | 0.169 (6) |
O8 | −0.0449 (2) | 0.81865 (13) | 0.05073 (8) | 0.0336 (3) | |
H8 | −0.0069 | 0.8306 | 0.0023 | 0.050* | |
N1 | 0.5472 (2) | 0.99524 (14) | 0.21010 (9) | 0.0194 (3) | |
H1N | 0.537 (4) | 0.9209 (17) | 0.1907 (15) | 0.043 (7)* | |
N2 | 0.0469 (2) | 0.70644 (14) | 0.20403 (9) | 0.0174 (3) | |
H2N | 0.029 (3) | 0.7936 (11) | 0.1854 (14) | 0.033 (6)* | |
C1 | 0.5840 (2) | 0.72652 (17) | 0.29646 (11) | 0.0192 (3) | |
C2 | 0.6121 (3) | 0.59874 (18) | 0.34689 (12) | 0.0271 (4) | |
H2A | 0.5990 | 0.5209 | 0.3243 | 0.032* | |
C3 | 0.6579 (3) | 0.58514 (18) | 0.42746 (12) | 0.0268 (4) | |
H3A | 0.6760 | 0.4983 | 0.4598 | 0.032* | |
C4 | 0.6782 (2) | 0.69780 (18) | 0.46259 (11) | 0.0232 (4) | |
C5 | 0.6502 (2) | 0.82333 (18) | 0.41675 (11) | 0.0224 (3) | |
H5 | 0.6619 | 0.8996 | 0.4411 | 0.027* | |
C6 | 0.6041 (2) | 0.84008 (16) | 0.33387 (11) | 0.0188 (3) | |
C7 | 0.5840 (2) | 0.97254 (17) | 0.28681 (11) | 0.0216 (3) | |
H7A | 0.5984 | 1.0463 | 0.3131 | 0.026* | |
C8 | 0.5387 (2) | 1.12384 (17) | 0.15371 (10) | 0.0203 (3) | |
C9 | 0.3328 (3) | 1.1578 (2) | 0.12391 (13) | 0.0329 (4) | |
H9A | 0.3316 | 1.2392 | 0.0813 | 0.039* | 0.535 (2) |
H9B | 0.2978 | 1.0842 | 0.0972 | 0.039* | 0.535 (2) |
H9C | 0.2577 | 1.1804 | 0.1709 | 0.039* | 0.328 (3) |
H9D | 0.3335 | 1.2417 | 0.0834 | 0.039* | 0.328 (3) |
H9E | 0.2957 | 1.0929 | 0.0908 | 0.039* | 0.137 (3) |
H9F | 0.2433 | 1.1569 | 0.1704 | 0.039* | 0.137 (3) |
C10 | 0.6699 (3) | 1.1019 (2) | 0.08285 (13) | 0.0338 (5) | |
H10A | 0.6471 | 1.1782 | 0.0373 | 0.041* | 0.650 (3) |
H10B | 0.8048 | 1.0987 | 0.1000 | 0.041* | 0.650 (3) |
H10C | 0.6697 | 1.0070 | 0.0769 | 0.041* | 0.183 (6) |
H10D | 0.6146 | 1.1573 | 0.0325 | 0.041* | 0.183 (6) |
H10E | 0.6352 | 1.0150 | 0.0712 | 0.041* | 0.166 (6) |
H10F | 0.6163 | 1.1698 | 0.0371 | 0.041* | 0.166 (6) |
C11 | 0.6064 (3) | 1.23560 (18) | 0.19279 (12) | 0.0289 (4) | |
H11A | 0.5204 | 1.2514 | 0.2382 | 0.035* | 0.660 (5) |
H11B | 0.7372 | 1.2106 | 0.2146 | 0.035* | 0.660 (5) |
H11C | 0.7408 | 1.2083 | 0.2092 | 0.035* | 0.340 (5) |
H11D | 0.6095 | 1.3150 | 0.1489 | 0.035* | 0.340 (5) |
C12 | 0.0782 (2) | 0.91510 (17) | 0.29366 (12) | 0.0216 (3) | |
C13 | 0.1062 (3) | 1.00731 (19) | 0.34634 (14) | 0.0292 (4) | |
H13 | 0.0916 | 1.1006 | 0.3253 | 0.035* | |
C14 | 0.1531 (3) | 0.9650 (2) | 0.42592 (15) | 0.0335 (5) | |
H14 | 0.1714 | 1.0291 | 0.4593 | 0.040* | |
C15 | 0.1751 (3) | 0.8282 (2) | 0.45953 (12) | 0.0271 (4) | |
C16 | 0.1489 (2) | 0.73448 (18) | 0.41255 (11) | 0.0219 (3) | |
H16 | 0.1619 | 0.6419 | 0.4357 | 0.026* | |
C17 | 0.1027 (2) | 0.77585 (16) | 0.32963 (11) | 0.0187 (3) | |
C18 | 0.0882 (2) | 0.67582 (16) | 0.28079 (10) | 0.0175 (3) | |
H18 | 0.1095 | 0.5842 | 0.3053 | 0.021* | |
C19 | 0.0507 (2) | 0.61584 (16) | 0.14497 (10) | 0.0172 (3) | |
C20 | 0.2570 (2) | 0.60202 (17) | 0.11302 (11) | 0.0213 (3) | |
H20A | 0.2621 | 0.5465 | 0.0701 | 0.026* | 0.835 (6) |
H20B | 0.2959 | 0.6917 | 0.0884 | 0.026* | 0.835 (6) |
H20C | 0.2963 | 0.6924 | 0.0902 | 0.026* | 0.165 (6) |
H20D | 0.3425 | 0.5636 | 0.1593 | 0.026* | 0.165 (6) |
C21 | −0.0160 (2) | 0.47961 (16) | 0.18370 (10) | 0.0197 (3) | |
H21A | 0.0747 | 0.4344 | 0.2267 | 0.024* | 0.831 (6) |
H21B | −0.1436 | 0.4914 | 0.2088 | 0.024* | 0.831 (6) |
H21C | −0.1389 | 0.4944 | 0.2119 | 0.024* | 0.169 (6) |
H21D | −0.0407 | 0.4299 | 0.1398 | 0.024* | 0.169 (6) |
C22 | −0.0847 (3) | 0.68282 (17) | 0.07586 (11) | 0.0229 (3) | |
H22A | −0.0676 | 0.6350 | 0.0294 | 0.027* | |
H22B | −0.2189 | 0.6784 | 0.0947 | 0.027* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1 | 0.0346 (3) | 0.0301 (2) | 0.0279 (2) | −0.00246 (19) | −0.01100 (18) | 0.00271 (18) |
Cl2 | 0.0343 (3) | 0.0474 (3) | 0.0384 (3) | 0.0139 (2) | −0.0164 (2) | −0.0295 (2) |
O1 | 0.0282 (7) | 0.0225 (6) | 0.0243 (6) | −0.0092 (5) | 0.0037 (5) | −0.0100 (5) |
O5 | 0.0241 (6) | 0.0153 (6) | 0.0333 (7) | −0.0013 (5) | 0.0054 (5) | −0.0018 (5) |
O2 | 0.0200 (9) | 0.0169 (9) | 0.0237 (9) | −0.0017 (7) | −0.0014 (7) | −0.0023 (7) |
O2' | 0.0200 (9) | 0.0169 (9) | 0.0237 (9) | −0.0017 (7) | −0.0014 (7) | −0.0023 (7) |
O2" | 0.0200 (9) | 0.0169 (9) | 0.0237 (9) | −0.0017 (7) | −0.0014 (7) | −0.0023 (7) |
O3 | 0.0374 (10) | 0.0208 (9) | 0.0184 (9) | 0.0056 (7) | 0.0022 (7) | −0.0069 (7) |
O3' | 0.0374 (10) | 0.0208 (9) | 0.0184 (9) | 0.0056 (7) | 0.0022 (7) | −0.0069 (7) |
O3" | 0.0374 (10) | 0.0208 (9) | 0.0184 (9) | 0.0056 (7) | 0.0022 (7) | −0.0069 (7) |
O4 | 0.0304 (10) | 0.0163 (8) | 0.0289 (10) | 0.0014 (7) | −0.0012 (7) | −0.0035 (7) |
O4' | 0.0304 (10) | 0.0163 (8) | 0.0289 (10) | 0.0014 (7) | −0.0012 (7) | −0.0035 (7) |
O6 | 0.0191 (8) | 0.0217 (8) | 0.0350 (9) | −0.0028 (6) | −0.0028 (6) | −0.0135 (6) |
O6' | 0.0191 (8) | 0.0217 (8) | 0.0350 (9) | −0.0028 (6) | −0.0028 (6) | −0.0135 (6) |
O7 | 0.0273 (9) | 0.0185 (8) | 0.0326 (9) | −0.0019 (6) | 0.0009 (6) | −0.0125 (6) |
O7' | 0.0273 (9) | 0.0185 (8) | 0.0326 (9) | −0.0019 (6) | 0.0009 (6) | −0.0125 (6) |
O8 | 0.0575 (10) | 0.0221 (7) | 0.0194 (6) | −0.0016 (6) | −0.0017 (6) | 0.0000 (5) |
N1 | 0.0198 (7) | 0.0167 (7) | 0.0231 (7) | −0.0006 (5) | −0.0021 (5) | −0.0075 (5) |
N2 | 0.0191 (7) | 0.0132 (6) | 0.0200 (7) | −0.0008 (5) | 0.0024 (5) | −0.0042 (5) |
C1 | 0.0150 (7) | 0.0201 (8) | 0.0246 (8) | −0.0050 (6) | 0.0038 (6) | −0.0082 (6) |
C2 | 0.0326 (10) | 0.0189 (8) | 0.0318 (10) | −0.0069 (7) | 0.0093 (8) | −0.0088 (7) |
C3 | 0.0286 (9) | 0.0187 (8) | 0.0315 (10) | −0.0017 (7) | 0.0052 (7) | −0.0014 (7) |
C4 | 0.0185 (8) | 0.0250 (9) | 0.0250 (9) | −0.0013 (6) | −0.0032 (6) | −0.0020 (7) |
C5 | 0.0199 (8) | 0.0210 (8) | 0.0275 (9) | −0.0013 (6) | −0.0078 (7) | −0.0068 (7) |
C6 | 0.0145 (7) | 0.0181 (8) | 0.0244 (8) | −0.0002 (6) | −0.0039 (6) | −0.0059 (6) |
C7 | 0.0211 (8) | 0.0192 (8) | 0.0262 (9) | 0.0016 (6) | −0.0069 (6) | −0.0094 (7) |
C8 | 0.0208 (8) | 0.0198 (8) | 0.0203 (8) | −0.0005 (6) | 0.0008 (6) | −0.0044 (6) |
C9 | 0.0230 (9) | 0.0364 (11) | 0.0336 (10) | −0.0047 (8) | −0.0029 (8) | 0.0098 (8) |
C10 | 0.0383 (11) | 0.0307 (10) | 0.0367 (11) | −0.0115 (8) | 0.0183 (9) | −0.0150 (8) |
C11 | 0.0396 (11) | 0.0174 (8) | 0.0301 (10) | 0.0014 (7) | −0.0068 (8) | −0.0066 (7) |
C12 | 0.0132 (7) | 0.0175 (8) | 0.0360 (10) | −0.0019 (6) | 0.0056 (6) | −0.0101 (7) |
C13 | 0.0212 (9) | 0.0185 (8) | 0.0515 (12) | −0.0012 (7) | −0.0006 (8) | −0.0161 (8) |
C14 | 0.0225 (9) | 0.0308 (10) | 0.0549 (13) | 0.0016 (7) | −0.0065 (8) | −0.0292 (9) |
C15 | 0.0175 (8) | 0.0338 (10) | 0.0344 (10) | 0.0042 (7) | −0.0049 (7) | −0.0202 (8) |
C16 | 0.0174 (8) | 0.0230 (8) | 0.0273 (9) | 0.0019 (6) | −0.0009 (6) | −0.0114 (7) |
C17 | 0.0136 (7) | 0.0185 (8) | 0.0261 (8) | −0.0013 (6) | 0.0024 (6) | −0.0096 (6) |
C18 | 0.0161 (7) | 0.0150 (7) | 0.0219 (8) | −0.0011 (6) | 0.0022 (6) | −0.0052 (6) |
C19 | 0.0191 (8) | 0.0158 (7) | 0.0176 (7) | −0.0014 (6) | 0.0016 (6) | −0.0056 (6) |
C20 | 0.0204 (8) | 0.0213 (8) | 0.0236 (8) | −0.0034 (6) | 0.0042 (6) | −0.0076 (6) |
C21 | 0.0211 (8) | 0.0167 (7) | 0.0225 (8) | −0.0037 (6) | 0.0018 (6) | −0.0054 (6) |
C22 | 0.0251 (9) | 0.0214 (8) | 0.0215 (8) | 0.0007 (7) | −0.0012 (7) | −0.0036 (6) |
Cl1—C4 | 1.7442 (19) | C6—C7 | 1.431 (2) |
Cl2—C15 | 1.744 (2) | C7—H7A | 0.9500 |
O1—C1 | 1.302 (2) | C8—C11 | 1.524 (2) |
O5—C12 | 1.289 (2) | C8—C10 | 1.526 (2) |
O2—C9 | 1.318 (3) | C8—C9 | 1.528 (3) |
O2—H2 | 0.8400 | C9—H9A | 0.9900 |
O2'—C9 | 1.251 (4) | C9—H9B | 0.9900 |
O2'—H2' | 0.8400 | C9—H9C | 0.9900 |
O2"—C9 | 1.268 (9) | C9—H9D | 0.9900 |
O2"—H2" | 0.8400 | C9—H9E | 0.9900 |
O3—C10 | 1.417 (3) | C9—H9F | 0.9900 |
O3—H3 | 0.8400 | C10—H10A | 0.9900 |
O3'—C10 | 1.318 (6) | C10—H10B | 0.9900 |
O3'—H3' | 0.8400 | C10—H10C | 0.9900 |
O3"—C10 | 1.266 (6) | C10—H10D | 0.9900 |
O3"—H3" | 0.8400 | C10—H10E | 0.9900 |
O4—C11 | 1.394 (3) | C10—H10F | 0.9900 |
O4—H4 | 0.8400 | C11—H11A | 0.9900 |
O4'—C11 | 1.313 (4) | C11—H11B | 0.9900 |
O4'—H4' | 0.8400 | C11—H11C | 0.9900 |
O6—C20 | 1.411 (2) | C11—H11D | 0.9900 |
O6—H6 | 0.8400 | C12—C13 | 1.427 (2) |
O6'—C20 | 1.389 (6) | C12—C17 | 1.435 (2) |
O6'—H6' | 0.8400 | C13—C14 | 1.360 (3) |
O7—C21 | 1.405 (2) | C13—H13 | 0.9500 |
O7—H7 | 0.8400 | C14—C15 | 1.402 (3) |
O7'—C21 | 1.428 (6) | C14—H14 | 0.9500 |
O7'—H7' | 0.8400 | C15—C16 | 1.368 (2) |
O8—C22 | 1.421 (2) | C16—C17 | 1.409 (2) |
O8—H8 | 0.8400 | C16—H16 | 0.9500 |
N1—C7 | 1.288 (2) | C17—C18 | 1.428 (2) |
N1—C8 | 1.467 (2) | C18—H18 | 0.9500 |
N1—H1N | 0.885 (10) | C19—C21 | 1.529 (2) |
N2—C18 | 1.297 (2) | C19—C22 | 1.532 (2) |
N2—C19 | 1.468 (2) | C19—C20 | 1.539 (2) |
N2—H2N | 0.886 (10) | C20—H20A | 0.9900 |
C1—C2 | 1.418 (2) | C20—H20B | 0.9900 |
C1—C6 | 1.430 (2) | C20—H20C | 0.9900 |
C2—C3 | 1.370 (3) | C20—H20D | 0.9900 |
C2—H2A | 0.9500 | C21—H21A | 0.9900 |
C3—C4 | 1.400 (3) | C21—H21B | 0.9900 |
C3—H3A | 0.9500 | C21—H21C | 0.9900 |
C4—C5 | 1.368 (2) | C21—H21D | 0.9900 |
C5—C6 | 1.405 (2) | C22—H22A | 0.9900 |
C5—H5 | 0.9500 | C22—H22B | 0.9900 |
C9—O2—H2 | 109.5 | H10E—C10—H10F | 105.1 |
C9—O2'—H2' | 109.5 | O4'—C11—O4 | 103.6 (2) |
C9—O2"—H2" | 109.5 | O4'—C11—C8 | 123.9 (2) |
C10—O3—H3 | 109.5 | O4—C11—C8 | 107.90 (16) |
C10—O3'—H3' | 109.5 | O4—C11—H11A | 110.1 |
C10—O3"—H3" | 109.5 | C8—C11—H11A | 110.1 |
C11—O4—H4 | 109.5 | O4'—C11—H11B | 100.6 |
C11—O4'—H4' | 109.5 | O4—C11—H11B | 110.1 |
C20—O6—H6 | 109.5 | C8—C11—H11B | 110.1 |
C20—O6'—H6' | 109.5 | H11A—C11—H11B | 108.4 |
C21—O7—H7 | 109.5 | O4'—C11—H11C | 106.4 |
C21—O7'—H7' | 109.5 | O4—C11—H11C | 108.0 |
C22—O8—H8 | 109.5 | C8—C11—H11C | 106.4 |
C7—N1—C8 | 127.86 (14) | O4'—C11—H11D | 106.4 |
C7—N1—H1N | 112.8 (18) | C8—C11—H11D | 106.4 |
C8—N1—H1N | 119.1 (18) | H11B—C11—H11D | 108.8 |
C18—N2—C19 | 127.48 (14) | H11C—C11—H11D | 106.4 |
C18—N2—H2N | 114.0 (16) | O5—C12—C13 | 122.12 (16) |
C19—N2—H2N | 118.0 (16) | O5—C12—C17 | 121.79 (15) |
O1—C1—C2 | 121.63 (15) | C13—C12—C17 | 116.09 (17) |
O1—C1—C6 | 121.54 (15) | C14—C13—C12 | 121.68 (18) |
C2—C1—C6 | 116.83 (16) | C14—C13—H13 | 119.2 |
C3—C2—C1 | 121.40 (16) | C12—C13—H13 | 119.2 |
C3—C2—H2A | 119.3 | C13—C14—C15 | 120.98 (17) |
C1—C2—H2A | 119.3 | C13—C14—H14 | 119.5 |
C2—C3—C4 | 120.73 (17) | C15—C14—H14 | 119.5 |
C2—C3—H3A | 119.6 | C16—C15—C14 | 120.36 (19) |
C4—C3—H3A | 119.6 | C16—C15—Cl2 | 120.69 (16) |
C5—C4—C3 | 120.11 (17) | C14—C15—Cl2 | 118.94 (14) |
C5—C4—Cl1 | 120.71 (14) | C15—C16—C17 | 119.69 (17) |
C3—C4—Cl1 | 119.18 (14) | C15—C16—H16 | 120.2 |
C4—C5—C6 | 120.31 (16) | C17—C16—H16 | 120.2 |
C4—C5—H5 | 119.8 | C16—C17—C18 | 118.51 (15) |
C6—C5—H5 | 119.8 | C16—C17—C12 | 121.20 (15) |
C5—C6—C1 | 120.61 (15) | C18—C17—C12 | 120.24 (16) |
C5—C6—C7 | 118.89 (15) | N2—C18—C17 | 121.93 (15) |
C1—C6—C7 | 120.46 (15) | N2—C18—H18 | 119.0 |
N1—C7—C6 | 122.31 (15) | C17—C18—H18 | 119.0 |
N1—C7—H7A | 118.8 | N2—C19—C21 | 111.20 (13) |
C6—C7—H7A | 118.8 | N2—C19—C22 | 106.69 (13) |
N1—C8—C11 | 112.26 (14) | C21—C19—C22 | 109.93 (14) |
N1—C8—C10 | 105.88 (15) | N2—C19—C20 | 107.43 (13) |
C11—C8—C10 | 109.77 (15) | C21—C19—C20 | 111.18 (14) |
N1—C8—C9 | 108.14 (14) | C22—C19—C20 | 110.29 (14) |
C11—C8—C9 | 110.66 (16) | O6'—C20—O6 | 105.2 (4) |
C10—C8—C9 | 110.00 (16) | O6'—C20—C19 | 114.2 (3) |
O2'—C9—C8 | 124.6 (2) | O6—C20—C19 | 111.78 (14) |
O2"—C9—C8 | 104.9 (4) | O6—C20—H20A | 109.3 |
O2—C9—C8 | 119.54 (19) | C19—C20—H20A | 109.3 |
O2'—C9—H9A | 103.4 | O6'—C20—H20B | 106.9 |
O2—C9—H9A | 107.4 | O6—C20—H20B | 109.3 |
C8—C9—H9A | 107.4 | C19—C20—H20B | 109.3 |
O2"—C9—H9B | 118.1 | H20A—C20—H20B | 107.9 |
O2—C9—H9B | 107.4 | O6'—C20—H20C | 108.7 |
C8—C9—H9B | 107.4 | O6—C20—H20C | 108.0 |
H9A—C9—H9B | 107.0 | C19—C20—H20C | 108.7 |
O2'—C9—H9C | 106.2 | H20A—C20—H20C | 109.8 |
C8—C9—H9C | 106.2 | O6'—C20—H20D | 108.7 |
H9A—C9—H9C | 108.2 | C19—C20—H20D | 108.7 |
H9B—C9—H9C | 120.1 | H20A—C20—H20D | 112.6 |
O2'—C9—H9D | 106.2 | H20B—C20—H20D | 109.0 |
O2—C9—H9D | 106.2 | H20C—C20—H20D | 107.6 |
C8—C9—H9D | 106.2 | O7—C21—O7' | 101.9 (3) |
H9B—C9—H9D | 109.8 | O7—C21—C19 | 108.48 (14) |
O2"—C9—H9E | 110.8 | O7'—C21—C19 | 115.5 (3) |
O2—C9—H9E | 110.1 | O7—C21—H21A | 110.0 |
C8—C9—H9E | 110.8 | C19—C21—H21A | 110.0 |
O2"—C9—H9F | 110.8 | O7—C21—H21B | 110.0 |
C8—C9—H9F | 110.8 | O7'—C21—H21B | 110.7 |
H9E—C9—H9F | 108.8 | C19—C21—H21B | 110.0 |
O3'—C10—C8 | 116.5 (5) | H21A—C21—H21B | 108.4 |
O3—C10—C8 | 111.74 (16) | O7—C21—H21C | 114.3 |
O3—C10—H10A | 109.3 | O7'—C21—H21C | 108.4 |
C8—C10—H10A | 109.3 | C19—C21—H21C | 108.4 |
O3—C10—H10B | 109.3 | H21A—C21—H21C | 105.6 |
C8—C10—H10B | 109.3 | O7'—C21—H21D | 108.4 |
H10A—C10—H10B | 107.9 | C19—C21—H21D | 108.4 |
O3'—C10—H10C | 108.2 | H21A—C21—H21D | 116.7 |
C8—C10—H10C | 108.2 | H21B—C21—H21D | 103.1 |
O3'—C10—H10D | 108.2 | H21C—C21—H21D | 107.5 |
C8—C10—H10D | 108.2 | O8—C22—C19 | 109.62 (14) |
H10C—C10—H10D | 107.3 | O8—C22—H22A | 109.7 |
C8—C10—H10E | 103.1 | C19—C22—H22A | 109.7 |
O3"—C10—H10F | 103.1 | O8—C22—H22B | 109.7 |
O3'—C10—H10F | 104.6 | C19—C22—H22B | 109.7 |
O3—C10—H10F | 101.4 | H22A—C22—H22B | 108.2 |
C8—C10—H10F | 103.1 | ||
O1—C1—C2—C3 | 179.32 (17) | C9—C8—C11—O4' | 58.1 (3) |
C6—C1—C2—C3 | −0.5 (3) | N1—C8—C11—O4 | 176.23 (16) |
C1—C2—C3—C4 | 0.0 (3) | C10—C8—C11—O4 | 58.8 (2) |
C2—C3—C4—C5 | 0.8 (3) | C9—C8—C11—O4 | −62.8 (2) |
C2—C3—C4—Cl1 | −178.35 (15) | O5—C12—C13—C14 | −179.70 (17) |
C3—C4—C5—C6 | −1.1 (3) | C17—C12—C13—C14 | 0.0 (3) |
Cl1—C4—C5—C6 | 178.02 (13) | C12—C13—C14—C15 | −0.3 (3) |
C4—C5—C6—C1 | 0.6 (3) | C13—C14—C15—C16 | −0.2 (3) |
C4—C5—C6—C7 | −177.26 (16) | C13—C14—C15—Cl2 | 178.80 (15) |
O1—C1—C6—C5 | −179.64 (15) | C14—C15—C16—C17 | 1.0 (3) |
C2—C1—C6—C5 | 0.2 (2) | Cl2—C15—C16—C17 | −177.95 (13) |
O1—C1—C6—C7 | −1.8 (2) | C15—C16—C17—C18 | 176.05 (16) |
C2—C1—C6—C7 | 178.03 (16) | C15—C16—C17—C12 | −1.4 (3) |
C8—N1—C7—C6 | −174.53 (16) | O5—C12—C17—C16 | −179.45 (15) |
C5—C6—C7—N1 | 178.05 (16) | C13—C12—C17—C16 | 0.9 (2) |
C1—C6—C7—N1 | 0.2 (3) | O5—C12—C17—C18 | 3.2 (2) |
C7—N1—C8—C11 | 7.8 (2) | C13—C12—C17—C18 | −176.51 (15) |
C7—N1—C8—C10 | 127.59 (19) | C19—N2—C18—C17 | 171.78 (15) |
C7—N1—C8—C9 | −114.5 (2) | C16—C17—C18—N2 | −179.76 (15) |
N1—C8—C9—O2' | −52.8 (3) | C12—C17—C18—N2 | −2.3 (2) |
C11—C8—C9—O2' | −176.2 (3) | C18—N2—C19—C21 | 36.7 (2) |
C10—C8—C9—O2' | 62.4 (3) | C18—N2—C19—C22 | 156.57 (16) |
N1—C8—C9—O2" | 174.6 (5) | C18—N2—C19—C20 | −85.16 (19) |
C11—C8—C9—O2" | 51.2 (5) | N2—C19—C20—O6' | −177.7 (4) |
C10—C8—C9—O2" | −70.2 (5) | C21—C19—C20—O6' | 60.4 (4) |
N1—C8—C9—O2 | 63.7 (2) | C22—C19—C20—O6' | −61.8 (4) |
C11—C8—C9—O2 | −59.6 (2) | N2—C19—C20—O6 | 62.94 (17) |
C10—C8—C9—O2 | 178.90 (19) | C21—C19—C20—O6 | −58.93 (18) |
N1—C8—C10—O3" | −80.6 (7) | C22—C19—C20—O6 | 178.86 (14) |
C11—C8—C10—O3" | 40.8 (7) | N2—C19—C21—O7 | 175.00 (14) |
C9—C8—C10—O3" | 162.8 (7) | C22—C19—C21—O7 | 57.08 (18) |
N1—C8—C10—O3' | −92.1 (5) | C20—C19—C21—O7 | −65.33 (18) |
C11—C8—C10—O3' | 29.3 (5) | N2—C19—C21—O7' | −71.5 (4) |
C9—C8—C10—O3' | 151.3 (4) | C22—C19—C21—O7' | 170.6 (4) |
N1—C8—C10—O3 | 46.0 (2) | C20—C19—C21—O7' | 48.2 (4) |
C11—C8—C10—O3 | 167.35 (18) | N2—C19—C22—O8 | 48.05 (18) |
C9—C8—C10—O3 | −70.7 (2) | C21—C19—C22—O8 | 168.73 (14) |
N1—C8—C11—O4' | −62.9 (3) | C20—C19—C22—O8 | −68.33 (18) |
C10—C8—C11—O4' | 179.7 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1n···O1 | 0.87 (1) | 1.82 (2) | 2.582 (2) | 143 (2) |
N2—H2n···O5 | 0.87 (1) | 1.82 (2) | 2.573 (2) | 141 (2) |
Experimental details
Crystal data | |
Chemical formula | C11H14ClNO4 |
Mr | 259.68 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 100 |
a, b, c (Å) | 7.0174 (1), 10.1935 (1), 16.7234 (2) |
α, β, γ (°) | 79.520 (1), 89.031 (1), 85.258 (1) |
V (Å3) | 1172.27 (2) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.33 |
Crystal size (mm) | 0.30 × 0.20 × 0.05 |
Data collection | |
Diffractometer | Bruker SMART APEX diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.908, 0.984 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 11241, 5361, 4771 |
Rint | 0.018 |
(sin θ/λ)max (Å−1) | 0.650 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.042, 0.117, 1.01 |
No. of reflections | 5361 |
No. of parameters | 360 |
No. of restraints | 47 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.41, −0.74 |
Computer programs: APEX2 (Bruker, 2007), SAINT (Bruker, 2007), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), X-SEED (Barbour, 2001), pubCIF (Westrip, 2008).
Acknowledgements
I thank the University of Malaya for supporting this study.
References
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A reevaluation of the title compound, originally reported as a neutral molecule (Chumakov et al., 2000), shows a zwitterionic compound, at low temperature, Fig. 1.