organic compounds
3-[(4-Amino-5-chloro-2-ethoxybenzamido)methyl]pyrrolo[2,1-c][1,4]oxazin-5-ium chloride monohydrate
aCollege of Pharmacy, China Pharmaceutical University, Nanjing 210009, People's Republic of China, and bSchool of Chemistry and Chemical Engineering, Southeast University, Nanjing 211189, People's Republic of China
*Correspondence e-mail: cep02chl@yahoo.cn
The title compound, C17H25ClN3O3+·Cl−·H2O, is a monohydrated hydrochloride salt of a new derivative of mosapride, which is a pharmaceutical compound possessing gastrointestinal pro-kinetic activity. The chloride anion accepts hydrogen bonds from the NH group of the pyrrolooxazine fused-ring system and from the amine group, and the water molecules form hydrogen bonds that bridge between the chloride anion and the C=O bond of the amide.
Related literature
For related structures and background information concerning mosapride, see: Kakigami et al. (1998); Morie et al. (1995); Omae et al. (2002); Aoki et al. (2007).
Experimental
Crystal data
|
Data collection: SMART (Bruker, 2000); cell SAINT (Bruker, 2000); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S160053680803986X/bi2322sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S160053680803986X/bi2322Isup2.hkl
A mixture of 4-amino-5-chloro-2-ethoxybenzoic acid (8.613 g, 40 mmol), (hexahydro-1H-pyrrolo[2,1-c][1,4]oxazin-3-yl)methanamine (4.8 g, 30.72 mmol) and 1-ethyl-3-(3-dimethylaminopropyl) carbodiimide hydrochloride (11.8 g, 61.8 mmol) in CH2Cl2 (60 ml) was stirred for two hours under an argon atmosphere. The products were treated with saturated NaHCO3 (200 ml) and extracted with CH2Cl2 (3 × 300 ml), then the organic layer was dried with anhydrous MgSO4 and distilled under vacuum. The white solids were collected and dried (yield 5.856 g, 54.0%). Crystals of the title compound were obtained by acidifying with hydrochloric acid then recrystallizing from methanol.
With the exception of the central amide group, H atoms bonded to N and O atoms were located in difference Fourier maps and refined without restraint. Other H atoms were positioned geometrically and refined using a riding model with N—H = 0.86 Å, C—H = 0.93–0.97 Å and with Uiso(H) = 1.2 times Ueq(C/N).
Data collection: SMART (Bruker, 2000); cell
SAINT (Bruker, 2000); data reduction: SAINT (Bruker, 2000); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. Molecular structure of the title compound with 30% displacement ellipsoids for non-H atoms. |
C17H25ClN3O3+·Cl−·H2O | F(000) = 864 |
Mr = 408.32 | Dx = 1.374 Mg m−3 |
Orthorhombic, P212121 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2ac 2ab | Cell parameters from 735 reflections |
a = 8.0984 (9) Å | θ = 2.5–28.0° |
b = 11.1594 (13) Å | µ = 0.36 mm−1 |
c = 21.843 (3) Å | T = 293 K |
V = 1974.0 (4) Å3 | Block, colourless |
Z = 4 | 0.24 × 0.20 × 0.16 mm |
Bruker APEX CCD diffractometer | 3848 independent reflections |
Radiation source: fine-focus sealed tube | 3188 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.037 |
ϕ and ω scans | θmax = 26.0°, θmin = 2.6° |
Absorption correction: multi-scan (SADABS; Bruker, 2000) | h = −9→9 |
Tmin = 0.919, Tmax = 0.945 | k = −10→13 |
10642 measured reflections | l = −26→25 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.050 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.096 | w = 1/[σ2(Fo2) + (0.0412P)2] where P = (Fo2 + 2Fc2)/3 |
S = 1.06 | (Δ/σ)max = 0.001 |
3848 reflections | Δρmax = 0.32 e Å−3 |
261 parameters | Δρmin = −0.22 e Å−3 |
0 restraints | Absolute structure: Flack (1983), 1631 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: −0.02 (7) |
C17H25ClN3O3+·Cl−·H2O | V = 1974.0 (4) Å3 |
Mr = 408.32 | Z = 4 |
Orthorhombic, P212121 | Mo Kα radiation |
a = 8.0984 (9) Å | µ = 0.36 mm−1 |
b = 11.1594 (13) Å | T = 293 K |
c = 21.843 (3) Å | 0.24 × 0.20 × 0.16 mm |
Bruker APEX CCD diffractometer | 3848 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2000) | 3188 reflections with I > 2σ(I) |
Tmin = 0.919, Tmax = 0.945 | Rint = 0.037 |
10642 measured reflections |
R[F2 > 2σ(F2)] = 0.050 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.096 | Δρmax = 0.32 e Å−3 |
S = 1.06 | Δρmin = −0.22 e Å−3 |
3848 reflections | Absolute structure: Flack (1983), 1631 Friedel pairs |
261 parameters | Absolute structure parameter: −0.02 (7) |
0 restraints |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.6257 (3) | 0.7564 (2) | 0.77046 (11) | 0.0307 (6) | |
C2 | 0.4701 (4) | 0.8084 (3) | 0.76571 (13) | 0.0364 (7) | |
C3 | 0.3807 (3) | 0.8034 (3) | 0.71361 (13) | 0.0376 (7) | |
C4 | 0.4363 (4) | 0.7438 (2) | 0.66142 (12) | 0.0344 (6) | |
C5 | 0.5913 (4) | 0.6900 (3) | 0.66594 (13) | 0.0368 (7) | |
C6 | 0.6851 (3) | 0.6961 (2) | 0.71801 (12) | 0.0323 (6) | |
C7 | 0.9124 (4) | 0.5928 (3) | 0.66895 (12) | 0.0443 (8) | |
H7A | 0.9261 | 0.6511 | 0.6364 | 0.053* | |
H7B | 0.8429 | 0.5283 | 0.6541 | 0.053* | |
C8 | 1.0757 (4) | 0.5452 (3) | 0.68833 (13) | 0.0455 (8) | |
H8A | 1.0590 | 0.4780 | 0.7150 | 0.068* | |
H8B | 1.1371 | 0.5201 | 0.6530 | 0.068* | |
H8C | 1.1360 | 0.6065 | 0.7096 | 0.068* | |
C9 | 0.7127 (4) | 0.7704 (2) | 0.82975 (12) | 0.0309 (6) | |
C10 | 0.9629 (4) | 0.7321 (3) | 0.88920 (13) | 0.0452 (8) | |
H10A | 0.8921 | 0.7486 | 0.9240 | 0.054* | |
H10B | 1.0431 | 0.7964 | 0.8860 | 0.054* | |
C11 | 1.0507 (4) | 0.6148 (3) | 0.89873 (12) | 0.0374 (7) | |
H11 | 0.9690 | 0.5504 | 0.9021 | 0.045* | |
C12 | 1.2222 (4) | 0.4781 (3) | 0.84947 (14) | 0.0523 (10) | |
H12A | 1.2880 | 0.4646 | 0.8130 | 0.063* | |
H12B | 1.1348 | 0.4186 | 0.8502 | 0.063* | |
C13 | 1.3298 (4) | 0.4625 (3) | 0.90549 (13) | 0.0408 (8) | |
H13 | 1.3596 | 0.3777 | 0.9090 | 0.049* | |
C14 | 1.1561 (4) | 0.6167 (3) | 0.95570 (11) | 0.0345 (7) | |
H14A | 1.2381 | 0.6798 | 0.9527 | 0.041* | |
H14B | 1.0878 | 0.6323 | 0.9913 | 0.041* | |
C15 | 1.4860 (4) | 0.5363 (3) | 0.90920 (16) | 0.0545 (9) | |
H15A | 1.4693 | 0.6151 | 0.8916 | 0.065* | |
H15B | 1.5759 | 0.4969 | 0.8878 | 0.065* | |
C16 | 1.5225 (5) | 0.5453 (4) | 0.97717 (17) | 0.0689 (11) | |
H16A | 1.6182 | 0.4971 | 0.9876 | 0.083* | |
H16B | 1.5443 | 0.6278 | 0.9886 | 0.083* | |
C17 | 1.3705 (4) | 0.4991 (3) | 1.01002 (14) | 0.0511 (9) | |
H17A | 1.3891 | 0.4191 | 1.0259 | 0.061* | |
H17B | 1.3406 | 0.5516 | 1.0436 | 0.061* | |
Cl1 | 0.92851 (11) | 0.35057 (8) | 0.99188 (4) | 0.0554 (3) | |
Cl2 | 0.18901 (10) | 0.87543 (9) | 0.70977 (4) | 0.0614 (3) | |
N1 | 0.3486 (4) | 0.7381 (3) | 0.60884 (12) | 0.0482 (7) | |
H1A | 0.266 (5) | 0.780 (3) | 0.5990 (16) | 0.072* | |
H1B | 0.394 (4) | 0.717 (3) | 0.5755 (15) | 0.072* | |
N2 | 0.8652 (3) | 0.7270 (2) | 0.83413 (10) | 0.0438 (7) | |
H2A | 0.9079 | 0.6941 | 0.8023 | 0.053* | |
N3 | 1.2391 (3) | 0.4983 (2) | 0.96212 (11) | 0.0363 (6) | |
O1 | 0.8390 (2) | 0.64810 (19) | 0.72151 (8) | 0.0410 (5) | |
O2 | 0.6491 (3) | 0.8222 (2) | 0.87342 (8) | 0.0453 (6) | |
O3 | 1.1512 (3) | 0.59417 (19) | 0.84669 (9) | 0.0478 (6) | |
O1W | 0.3524 (4) | 0.8923 (3) | 0.92869 (14) | 0.0712 (8) | |
H2 | 0.426 (3) | 0.845 (2) | 0.8005 (12) | 0.038 (8)* | |
H5 | 0.627 (3) | 0.648 (3) | 0.6312 (12) | 0.043 (8)* | |
H3C | 1.161 (3) | 0.443 (2) | 0.9736 (11) | 0.031 (8)* | |
H1WA | 0.368 (4) | 0.954 (3) | 0.9456 (15) | 0.049 (12)* | |
H1WB | 0.444 (6) | 0.887 (4) | 0.9073 (18) | 0.103 (16)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0306 (16) | 0.0293 (15) | 0.0321 (14) | −0.0011 (13) | 0.0022 (12) | 0.0019 (12) |
C2 | 0.0337 (18) | 0.0426 (18) | 0.0329 (16) | 0.0061 (14) | 0.0033 (13) | −0.0059 (14) |
C3 | 0.0220 (15) | 0.0445 (18) | 0.0461 (17) | 0.0067 (13) | −0.0004 (13) | 0.0014 (15) |
C4 | 0.0289 (15) | 0.0347 (16) | 0.0395 (16) | 0.0000 (14) | −0.0011 (14) | 0.0037 (13) |
C5 | 0.0427 (19) | 0.0369 (17) | 0.0308 (15) | −0.0003 (14) | 0.0093 (14) | −0.0037 (13) |
C6 | 0.0295 (16) | 0.0310 (16) | 0.0364 (15) | 0.0031 (13) | 0.0027 (13) | 0.0048 (13) |
C7 | 0.046 (2) | 0.0475 (19) | 0.0396 (17) | 0.0091 (16) | 0.0043 (15) | −0.0063 (15) |
C8 | 0.0380 (19) | 0.0496 (19) | 0.0488 (18) | 0.0063 (17) | 0.0112 (16) | −0.0018 (15) |
C9 | 0.0303 (16) | 0.0275 (15) | 0.0350 (15) | 0.0027 (12) | 0.0025 (13) | 0.0008 (13) |
C10 | 0.045 (2) | 0.0479 (19) | 0.0430 (18) | 0.0126 (16) | −0.0087 (15) | −0.0073 (15) |
C11 | 0.0368 (16) | 0.0376 (17) | 0.0380 (15) | 0.0030 (15) | −0.0034 (14) | −0.0028 (14) |
C12 | 0.052 (2) | 0.063 (2) | 0.0426 (18) | 0.0179 (19) | −0.0069 (16) | −0.0193 (17) |
C13 | 0.0390 (19) | 0.0365 (17) | 0.0468 (17) | 0.0072 (15) | −0.0058 (15) | −0.0087 (14) |
C14 | 0.0361 (16) | 0.0335 (16) | 0.0338 (14) | 0.0030 (14) | −0.0013 (13) | −0.0051 (13) |
C15 | 0.038 (2) | 0.054 (2) | 0.071 (2) | 0.0050 (16) | 0.0032 (18) | −0.0074 (19) |
C16 | 0.043 (2) | 0.077 (3) | 0.087 (3) | −0.0011 (19) | −0.016 (2) | −0.024 (2) |
C17 | 0.059 (2) | 0.0451 (19) | 0.0486 (19) | 0.0065 (17) | −0.0229 (17) | −0.0012 (16) |
Cl1 | 0.0476 (5) | 0.0593 (5) | 0.0594 (5) | −0.0128 (4) | −0.0147 (4) | 0.0070 (4) |
Cl2 | 0.0388 (5) | 0.0819 (7) | 0.0635 (5) | 0.0261 (5) | −0.0107 (4) | −0.0162 (5) |
N1 | 0.0410 (17) | 0.067 (2) | 0.0367 (15) | 0.0077 (15) | −0.0072 (13) | −0.0028 (14) |
N2 | 0.0434 (16) | 0.0529 (16) | 0.0350 (13) | 0.0173 (13) | −0.0074 (12) | −0.0107 (12) |
N3 | 0.0367 (15) | 0.0338 (14) | 0.0385 (14) | −0.0018 (12) | −0.0079 (11) | 0.0017 (12) |
O1 | 0.0352 (12) | 0.0515 (13) | 0.0364 (10) | 0.0138 (10) | 0.0004 (9) | −0.0086 (10) |
O2 | 0.0358 (12) | 0.0588 (15) | 0.0415 (11) | 0.0069 (11) | 0.0012 (10) | −0.0108 (11) |
O3 | 0.0531 (14) | 0.0558 (14) | 0.0346 (10) | 0.0229 (12) | −0.0035 (10) | −0.0039 (10) |
O1W | 0.0479 (18) | 0.088 (2) | 0.078 (2) | 0.0005 (17) | 0.0099 (15) | −0.0155 (18) |
C1—C2 | 1.391 (4) | C11—H11 | 0.980 |
C1—C6 | 1.413 (4) | C12—O3 | 1.419 (4) |
C1—C9 | 1.483 (4) | C12—C13 | 1.512 (4) |
C2—C3 | 1.350 (4) | C12—H12A | 0.970 |
C2—H2 | 0.93 (3) | C12—H12B | 0.970 |
C3—C4 | 1.394 (4) | C13—N3 | 1.493 (4) |
C3—Cl2 | 1.750 (3) | C13—C15 | 1.511 (4) |
C4—N1 | 1.352 (4) | C13—H13 | 0.980 |
C4—C5 | 1.395 (4) | C14—N3 | 1.489 (4) |
C5—C6 | 1.369 (4) | C14—H14A | 0.970 |
C5—H5 | 0.94 (3) | C14—H14B | 0.970 |
C6—O1 | 1.359 (3) | C15—C16 | 1.517 (4) |
C7—O1 | 1.432 (3) | C15—H15A | 0.970 |
C7—C8 | 1.486 (4) | C15—H15B | 0.970 |
C7—H7A | 0.970 | C16—C17 | 1.515 (5) |
C7—H7B | 0.970 | C16—H16A | 0.970 |
C8—H8A | 0.960 | C16—H16B | 0.970 |
C8—H8B | 0.960 | C17—N3 | 1.492 (4) |
C8—H8C | 0.960 | C17—H17A | 0.970 |
C9—O2 | 1.229 (3) | C17—H17B | 0.970 |
C9—N2 | 1.330 (4) | N1—H1A | 0.84 (4) |
C10—N2 | 1.441 (3) | N1—H1B | 0.85 (3) |
C10—C11 | 1.504 (4) | N2—H2A | 0.860 |
C10—H10A | 0.970 | N3—H3C | 0.92 (3) |
C10—H10B | 0.970 | O1W—H1WA | 0.79 (3) |
C11—O3 | 1.417 (3) | O1W—H1WB | 0.88 (4) |
C11—C14 | 1.509 (4) | ||
C2—C1—C6 | 116.5 (3) | O3—C12—H12B | 109.2 |
C2—C1—C9 | 116.8 (2) | C13—C12—H12B | 109.2 |
C6—C1—C9 | 126.7 (2) | H12A—C12—H12B | 107.9 |
C3—C2—C1 | 122.1 (3) | N3—C13—C15 | 102.8 (2) |
C3—C2—H2 | 120.1 (17) | N3—C13—C12 | 110.9 (2) |
C1—C2—H2 | 117.8 (17) | C15—C13—C12 | 117.6 (3) |
C2—C3—C4 | 122.4 (3) | N3—C13—H13 | 108.4 |
C2—C3—Cl2 | 119.8 (2) | C15—C13—H13 | 108.4 |
C4—C3—Cl2 | 117.8 (2) | C12—C13—H13 | 108.4 |
N1—C4—C3 | 123.2 (3) | N3—C14—C11 | 108.7 (2) |
N1—C4—C5 | 120.8 (3) | N3—C14—H14A | 109.9 |
C3—C4—C5 | 116.0 (3) | C11—C14—H14A | 109.9 |
C6—C5—C4 | 122.4 (3) | N3—C14—H14B | 109.9 |
C6—C5—H5 | 122.0 (18) | C11—C14—H14B | 109.9 |
C4—C5—H5 | 115.6 (18) | H14A—C14—H14B | 108.3 |
O1—C6—C5 | 122.4 (2) | C13—C15—C16 | 104.6 (3) |
O1—C6—C1 | 117.0 (2) | C13—C15—H15A | 110.8 |
C5—C6—C1 | 120.6 (3) | C16—C15—H15A | 110.8 |
O1—C7—C8 | 107.1 (2) | C13—C15—H15B | 110.8 |
O1—C7—H7A | 110.3 | C16—C15—H15B | 110.8 |
C8—C7—H7A | 110.3 | H15A—C15—H15B | 108.9 |
O1—C7—H7B | 110.3 | C17—C16—C15 | 106.4 (3) |
C8—C7—H7B | 110.3 | C17—C16—H16A | 110.4 |
H7A—C7—H7B | 108.5 | C15—C16—H16A | 110.4 |
C7—C8—H8A | 109.1 | C17—C16—H16B | 110.4 |
C7—C8—H8B | 109.7 | C15—C16—H16B | 110.4 |
H8A—C8—H8B | 109.5 | H16A—C16—H16B | 108.6 |
C7—C8—H8C | 109.7 | N3—C17—C16 | 104.4 (3) |
H8A—C8—H8C | 109.5 | N3—C17—H17A | 110.9 |
H8B—C8—H8C | 109.5 | C16—C17—H17A | 110.9 |
O2—C9—N2 | 120.3 (3) | N3—C17—H17B | 110.9 |
O2—C9—C1 | 121.9 (2) | C16—C17—H17B | 110.9 |
N2—C9—C1 | 117.7 (2) | H17A—C17—H17B | 108.9 |
N2—C10—C11 | 109.9 (2) | C4—N1—H1A | 127 (3) |
N2—C10—H10A | 109.7 | C4—N1—H1B | 121 (3) |
C11—C10—H10A | 109.7 | H1A—N1—H1B | 106 (3) |
N2—C10—H10B | 109.7 | C9—N2—C10 | 123.8 (2) |
C11—C10—H10B | 109.7 | C9—N2—H2A | 118.1 |
H10A—C10—H10B | 108.2 | C10—N2—H2A | 118.1 |
O3—C11—C10 | 107.6 (2) | C14—N3—C17 | 112.5 (2) |
O3—C11—C14 | 109.8 (2) | C14—N3—C13 | 112.4 (2) |
C10—C11—C14 | 111.7 (2) | C17—N3—C13 | 103.4 (2) |
O3—C11—H11 | 109.2 | C14—N3—H3C | 108.4 (17) |
C10—C11—H11 | 109.2 | C17—N3—H3C | 107.6 (16) |
C14—C11—H11 | 109.2 | C13—N3—H3C | 112.4 (16) |
O3—C12—C13 | 111.9 (3) | C6—O1—C7 | 120.4 (2) |
O3—C12—H12A | 109.2 | C11—O3—C12 | 110.3 (2) |
C13—C12—H12A | 109.2 | H1WA—O1W—H1WB | 100 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···Cl1i | 0.84 (4) | 2.66 (4) | 3.384 (3) | 146 (3) |
N1—H1B···Cl1ii | 0.85 (3) | 2.45 (3) | 3.281 (3) | 169 (3) |
N3—H3C···Cl1 | 0.92 (3) | 2.18 (3) | 3.077 (3) | 164 (2) |
O1W—H1WA···Cl1iii | 0.79 (3) | 2.62 (3) | 3.410 (4) | 176 (3) |
O1W—H1WB···O2 | 0.88 (4) | 1.95 (5) | 2.800 (4) | 161 (4) |
Symmetry codes: (i) −x+1, y+1/2, −z+3/2; (ii) −x+3/2, −y+1, z−1/2; (iii) x−1/2, −y+3/2, −z+2. |
Experimental details
Crystal data | |
Chemical formula | C17H25ClN3O3+·Cl−·H2O |
Mr | 408.32 |
Crystal system, space group | Orthorhombic, P212121 |
Temperature (K) | 293 |
a, b, c (Å) | 8.0984 (9), 11.1594 (13), 21.843 (3) |
V (Å3) | 1974.0 (4) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.36 |
Crystal size (mm) | 0.24 × 0.20 × 0.16 |
Data collection | |
Diffractometer | Bruker APEX CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2000) |
Tmin, Tmax | 0.919, 0.945 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 10642, 3848, 3188 |
Rint | 0.037 |
(sin θ/λ)max (Å−1) | 0.617 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.050, 0.096, 1.06 |
No. of reflections | 3848 |
No. of parameters | 261 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.32, −0.22 |
Absolute structure | Flack (1983), 1631 Friedel pairs |
Absolute structure parameter | −0.02 (7) |
Computer programs: SMART (Bruker, 2000), SAINT (Bruker, 2000), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···Cl1i | 0.84 (4) | 2.66 (4) | 3.384 (3) | 146 (3) |
N1—H1B···Cl1ii | 0.85 (3) | 2.45 (3) | 3.281 (3) | 169 (3) |
N3—H3C···Cl1 | 0.92 (3) | 2.18 (3) | 3.077 (3) | 164 (2) |
O1W—H1WA···Cl1iii | 0.79 (3) | 2.62 (3) | 3.410 (4) | 176 (3) |
O1W—H1WB···O2 | 0.88 (4) | 1.95 (5) | 2.800 (4) | 161 (4) |
Symmetry codes: (i) −x+1, y+1/2, −z+3/2; (ii) −x+3/2, −y+1, z−1/2; (iii) x−1/2, −y+3/2, −z+2. |
Acknowledgements
The authors thank the Program for Young Excellent Talents in China Pharmaceutical University for financial support.
References
Aoki, Y., Hakamata, H., Igarashi, Y., Uchida, K., Kobayashi, H., Hirayama, N., Kotani, A. & Kusu, F. (2007). J. Chromatogr. B858, 135–142. Google Scholar
Bruker (2000). SMART, SAINT and SADABS. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Flack, H. D. (1983). Acta Cryst. A39, 876–881. CrossRef CAS Web of Science IUCr Journals Google Scholar
Kakigami, T., Usui, T., Ikami, T., Tsukamoto, K., Miwa, Y., Taga, T. & Kataoka, T. (1998). Chem. Pharm. Bull. 46, 1039–1043. Web of Science CrossRef CAS PubMed Google Scholar
Morie, T., Kato, S., Harada, H., Yoshida, N., Fujiwara, I. & Matsumoto, J.-I. (1995). Chem. Pharm. Bull. 43, 1137–1147. CrossRef CAS PubMed Web of Science Google Scholar
Omae, T., Sakurai, M., Ashizawa, K. & Kajima, T. (2002). Anal. Sci. 18, 729–730. Web of Science CSD CrossRef PubMed CAS Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Mosapride citrate is a benzamide derivative that possesses a gastrointestinal prokinetic activity (Aoki et al. 2007). The title compound (Fig. 1) is a new mosapride derivative, and crystals of its hydrochloride salt were obtained by acidifying with hydrochloric acid then recrystallizing from methanol.
In the benzamide unit, the C=O bond distance of 1.229 (3) Å is much shorter than the C—O bond distances (1.359 (3)–1.432 (3) Å), showing it to have full double-bond character. Meanwhile, the C9—N2 distance of 1.330 (4) Å is comparable with that of C4—N1 (1.352 (4) Å), but much shorter than N2—C10 (1.441 (3) Å), N3—C13 (1.493 (4) Å), N3—C14 (1.489 (4) Å) and N3—C17 (1.492 (4) Å). Thus, the C4—N1 bond has partial double-bond character.