metal-organic compounds
Poly[diaqua-μ-oxalato-μ-pyrazine-2-carboxylato-lanthanum(III)]
aSchool of Chemistry and the Environment, South China Normal University, Guangzhou 510006, People's Republic of China, and bKey Laboratory of Technology on Electrochemical Energy Storage and Power Generation in Guangdong Universities, Guangzhou 510631, People's Republic of China
*Correspondence e-mail: luoyf2004@yahoo.com.cn
In the title complex, [La(C5H3N2O2)(C2O4)(H2O)2]n, the LaIII ion is coordinated by one N and three O atoms from two pyrazine-2-carboxylate ligands, by four O atoms from two oxalate ligands and by two O atoms of two water molecules, displaying a distorted bicapped square-antiprismatic geometry. The carboxylate groups of pyrazine-2-carboxylate and oxalate ligands link the lanthanum metal centres, forming layers parallel to (10). The layers are further connected by intermolecular O—H⋯O and N—H⋯O hydrogen-bonding interactions, forming a three-dimensional supramolecular network.
Related literature
For general background, see: Eddaoudi et al. (2001); Rizk et al. (2005); Zeng et al. (2007).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2004); cell SAINT (Bruker, 2004); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEPIII (Burnett & Johnson, 1996), PLATON (Spek, 2003) and SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXL97.
Supporting information
10.1107/S1600536808041664/dn2413sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536808041664/dn2413Isup2.hkl
A mixture of La2O3 (0.245 g; 0.75 mmol), pyrazine-2-carboxylic acid (0.186 g; 1.5 mmol), oxalic acid(0.135 g; 1.5 mmol), water (10 mL) in the presence of HNO3 (0.024 g; 0.385 mmol) was stirred vigorously for 20 min and then sealed in a Teflon-lined stainless-steel autoclave (20 mL, capacity). The autoclave was heated and maintained at 433K for 3 days, and then cooled to room temperature at 5 K h-1 and obtained the colorless block crystals.
Water H atoms were tentatively located in difference Fourier maps and were refined with distance restraints of O–H = 0.84 Å and H···H = 1.35 Å, and with Uiso(H) = 1.5 Ueq(O). In the last cycles of
they were treated as riding on the O atoms. Carbon-bound H atoms were placed at calculated positions and were treated as riding on their parent C atoms with C—H = 0.93 Å, and with Uiso(H) = 1.2 Ueq(C).Data collection: APEX2 (Bruker, 2004); cell
SAINT (Bruker, 2004); data reduction: SAINT (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEPIII (Burnett & Johnson, 1996), PLATON (Spek, 2003) and SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).[La(C5H3N2O2)(C2O4)(H2O)2] | Z = 2 |
Mr = 386.06 | F(000) = 368 |
Triclinic, P1 | Dx = 2.391 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 8.040 (3) Å | Cell parameters from 6377 reflections |
b = 8.7343 (18) Å | θ = 1.7–28.0° |
c = 8.8329 (18) Å | µ = 4.02 mm−1 |
α = 115.552 (2)° | T = 296 K |
β = 101.447 (3)° | Block, colourless |
γ = 95.789 (3)° | 0.17 × 0.16 × 0.14 mm |
V = 536.1 (3) Å3 |
Bruker APEXII area-detector diffractometer | 1898 independent reflections |
Radiation source: fine-focus sealed tube | 1787 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.020 |
ϕ and ω scans | θmax = 25.2°, θmin = 2.6° |
Absorption correction: multi-scan (APEX2; Bruker, 2004) | h = −5→9 |
Tmin = 0.548, Tmax = 0.603 | k = −10→10 |
2761 measured reflections | l = −10→10 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.031 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.078 | H-atom parameters constrained |
S = 1.07 | w = 1/[σ2(Fo2) + (0.0533P)2] where P = (Fo2 + 2Fc2)/3 |
1898 reflections | (Δ/σ)max < 0.001 |
163 parameters | Δρmax = 1.61 e Å−3 |
6 restraints | Δρmin = −1.22 e Å−3 |
[La(C5H3N2O2)(C2O4)(H2O)2] | γ = 95.789 (3)° |
Mr = 386.06 | V = 536.1 (3) Å3 |
Triclinic, P1 | Z = 2 |
a = 8.040 (3) Å | Mo Kα radiation |
b = 8.7343 (18) Å | µ = 4.02 mm−1 |
c = 8.8329 (18) Å | T = 296 K |
α = 115.552 (2)° | 0.17 × 0.16 × 0.14 mm |
β = 101.447 (3)° |
Bruker APEXII area-detector diffractometer | 1898 independent reflections |
Absorption correction: multi-scan (APEX2; Bruker, 2004) | 1787 reflections with I > 2σ(I) |
Tmin = 0.548, Tmax = 0.603 | Rint = 0.020 |
2761 measured reflections |
R[F2 > 2σ(F2)] = 0.031 | 6 restraints |
wR(F2) = 0.078 | H-atom parameters constrained |
S = 1.07 | Δρmax = 1.61 e Å−3 |
1898 reflections | Δρmin = −1.22 e Å−3 |
163 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.2750 (6) | 0.2794 (6) | 0.7523 (6) | 0.0218 (10) | |
C2 | 0.2577 (7) | 0.4053 (7) | 0.9066 (7) | 0.0285 (11) | |
H2 | 0.3191 | 0.4122 | 1.0111 | 0.034* | |
C3 | 0.0676 (7) | 0.4974 (7) | 0.7564 (7) | 0.0304 (12) | |
H3 | −0.0079 | 0.5706 | 0.7529 | 0.036* | |
C4 | 0.0849 (7) | 0.3716 (7) | 0.6014 (7) | 0.0289 (11) | |
H4 | 0.0202 | 0.3621 | 0.4968 | 0.035* | |
C5 | 0.5718 (6) | 0.4928 (6) | 0.5701 (6) | 0.0204 (10) | |
C6 | 0.0553 (6) | −0.0282 (6) | −0.0653 (6) | 0.0218 (10) | |
C7 | 0.3936 (6) | 0.1564 (7) | 0.7458 (6) | 0.0238 (10) | |
La1 | 0.33941 (3) | 0.08521 (3) | 0.32247 (3) | 0.01745 (13) | |
N1 | 0.1560 (6) | 0.5173 (6) | 0.9109 (6) | 0.0284 (10) | |
N8 | 0.1914 (5) | 0.2634 (5) | 0.5974 (5) | 0.0235 (9) | |
O1 | 0.3920 (5) | 0.0398 (4) | 0.5980 (4) | 0.0248 (8) | |
O2 | 0.4933 (5) | 0.1760 (5) | 0.8841 (5) | 0.0314 (8) | |
O3 | 0.5571 (5) | 0.3495 (4) | 0.5715 (4) | 0.0246 (7) | |
O4 | 0.6879 (4) | 0.6241 (4) | 0.6678 (4) | 0.0264 (8) | |
O5 | −0.0155 (4) | −0.0721 (5) | −0.2201 (4) | 0.0299 (8) | |
O6 | 0.2119 (4) | −0.0240 (5) | −0.0025 (4) | 0.0292 (8) | |
O1W | 0.2022 (5) | −0.2208 (4) | 0.2499 (4) | 0.0271 (8) | |
O2W | 0.5746 (5) | 0.1980 (5) | 0.2097 (4) | 0.0300 (8) | |
H1W | 0.1827 | −0.2913 | 0.1441 | 0.045* | |
H3W | 0.5293 | 0.2079 | 0.1210 | 0.045* | |
H2W | 0.2583 | −0.2630 | 0.3071 | 0.045* | |
H4W | 0.6611 | 0.1534 | 0.1900 | 0.045* |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.018 (2) | 0.027 (2) | 0.021 (2) | 0.007 (2) | 0.005 (2) | 0.012 (2) |
C2 | 0.024 (3) | 0.033 (3) | 0.026 (3) | 0.008 (2) | 0.004 (2) | 0.012 (2) |
C3 | 0.030 (3) | 0.030 (3) | 0.033 (3) | 0.012 (2) | 0.010 (2) | 0.014 (2) |
C4 | 0.031 (3) | 0.033 (3) | 0.029 (3) | 0.017 (2) | 0.007 (2) | 0.018 (2) |
C5 | 0.015 (2) | 0.025 (2) | 0.021 (2) | 0.0083 (19) | 0.005 (2) | 0.009 (2) |
C6 | 0.017 (2) | 0.023 (2) | 0.024 (2) | 0.0043 (19) | 0.004 (2) | 0.010 (2) |
C7 | 0.018 (2) | 0.033 (3) | 0.025 (3) | 0.005 (2) | 0.007 (2) | 0.016 (2) |
La1 | 0.01352 (18) | 0.01999 (18) | 0.01806 (18) | 0.00464 (11) | 0.00163 (12) | 0.00898 (13) |
N1 | 0.022 (2) | 0.027 (2) | 0.031 (2) | 0.0072 (18) | 0.0067 (19) | 0.0093 (19) |
N8 | 0.022 (2) | 0.027 (2) | 0.023 (2) | 0.0084 (17) | 0.0035 (17) | 0.0132 (18) |
O1 | 0.0267 (19) | 0.0270 (18) | 0.0238 (18) | 0.0104 (15) | 0.0089 (15) | 0.0126 (15) |
O2 | 0.028 (2) | 0.046 (2) | 0.0244 (18) | 0.0153 (17) | 0.0049 (16) | 0.0195 (17) |
O3 | 0.0261 (19) | 0.0225 (17) | 0.0260 (18) | 0.0047 (14) | 0.0020 (15) | 0.0143 (15) |
O4 | 0.0196 (18) | 0.0241 (18) | 0.0316 (19) | 0.0037 (15) | −0.0015 (15) | 0.0131 (16) |
O5 | 0.0172 (18) | 0.049 (2) | 0.0197 (18) | 0.0097 (16) | 0.0016 (15) | 0.0132 (16) |
O6 | 0.0147 (18) | 0.046 (2) | 0.0220 (17) | 0.0100 (16) | 0.0020 (14) | 0.0123 (16) |
O1W | 0.0262 (19) | 0.0239 (18) | 0.0263 (18) | 0.0031 (15) | 0.0015 (15) | 0.0100 (15) |
O2W | 0.027 (2) | 0.039 (2) | 0.0272 (19) | 0.0109 (17) | 0.0114 (16) | 0.0166 (17) |
C1—N8 | 1.340 (6) | C7—O1 | 1.259 (6) |
C1—C2 | 1.378 (7) | La1—O1W | 2.533 (3) |
C1—C7 | 1.497 (7) | La1—O4i | 2.536 (3) |
C2—N1 | 1.330 (7) | La1—O6 | 2.544 (3) |
C2—H2 | 0.9300 | La1—O3 | 2.551 (3) |
C3—N1 | 1.336 (7) | La1—O5ii | 2.555 (4) |
C3—C4 | 1.382 (7) | La1—O1 | 2.592 (3) |
C3—H3 | 0.9300 | La1—O2W | 2.600 (4) |
C4—N8 | 1.332 (7) | La1—O1iii | 2.623 (3) |
C4—H4 | 0.9300 | La1—N8 | 2.828 (4) |
C5—O4 | 1.242 (6) | La1—O2iii | 2.889 (4) |
C5—O3 | 1.250 (6) | La1—C7iii | 3.124 (5) |
C5—C5i | 1.574 (9) | O1W—H1W | 0.8385 |
C6—O5 | 1.239 (6) | O1W—H2W | 0.8353 |
C6—O6 | 1.261 (6) | O2W—H3W | 0.8400 |
C6—C6ii | 1.539 (9) | O2W—H4W | 0.8421 |
C7—O2 | 1.252 (6) | ||
N8—C1—C2 | 122.0 (5) | O5ii—La1—O1iii | 154.21 (12) |
N8—C1—C7 | 115.3 (4) | O1—La1—O1iii | 60.45 (13) |
C2—C1—C7 | 122.7 (5) | O2W—La1—O1iii | 75.58 (11) |
N1—C2—C1 | 122.1 (5) | O1W—La1—N8 | 97.55 (12) |
N1—C2—H2 | 118.9 | O4i—La1—N8 | 72.37 (12) |
C1—C2—H2 | 118.9 | O6—La1—N8 | 128.17 (11) |
N1—C3—C4 | 122.0 (5) | O3—La1—N8 | 68.57 (12) |
N1—C3—H3 | 119.0 | O5ii—La1—N8 | 66.44 (11) |
C4—C3—H3 | 119.0 | O1—La1—N8 | 58.52 (11) |
N8—C4—C3 | 121.9 (5) | O2W—La1—N8 | 131.02 (12) |
N8—C4—H4 | 119.0 | O1iii—La1—N8 | 115.86 (11) |
C3—C4—H4 | 119.0 | O1W—La1—O2iii | 66.41 (11) |
O4—C5—O3 | 126.6 (4) | O4i—La1—O2iii | 129.49 (11) |
O4—C5—C5i | 117.0 (5) | O6—La1—O2iii | 68.05 (11) |
O3—C5—C5i | 116.4 (5) | O3—La1—O2iii | 112.40 (11) |
O5—C6—O6 | 126.1 (4) | O5ii—La1—O2iii | 121.50 (11) |
O5—C6—C6ii | 118.0 (5) | O1—La1—O2iii | 99.45 (10) |
O6—C6—C6ii | 115.9 (5) | O2W—La1—O2iii | 65.10 (11) |
O2—C7—O1 | 122.7 (5) | O1iii—La1—O2iii | 46.83 (10) |
O2—C7—C1 | 119.7 (5) | N8—La1—O2iii | 157.23 (11) |
O1—C7—C1 | 117.5 (4) | O1W—La1—C7iii | 68.77 (12) |
O2—C7—La1iii | 67.6 (3) | O4i—La1—C7iii | 137.10 (12) |
O1—C7—La1iii | 55.5 (3) | O6—La1—C7iii | 91.66 (12) |
C1—C7—La1iii | 169.0 (3) | O3—La1—C7iii | 95.00 (12) |
O1W—La1—O4i | 150.33 (12) | O5ii—La1—C7iii | 139.98 (12) |
O1W—La1—O6 | 82.82 (11) | O1—La1—C7iii | 78.74 (11) |
O4i—La1—O6 | 82.26 (12) | O2W—La1—C7iii | 70.04 (12) |
O1W—La1—O3 | 139.37 (10) | O1iii—La1—C7iii | 23.29 (11) |
O4i—La1—O3 | 63.95 (11) | N8—La1—C7iii | 136.97 (12) |
O6—La1—O3 | 136.33 (11) | O2iii—La1—C7iii | 23.62 (11) |
O1W—La1—O5ii | 77.14 (12) | C2—N1—C3 | 116.0 (5) |
O4i—La1—O5ii | 73.25 (12) | C4—N8—C1 | 115.9 (4) |
O6—La1—O5ii | 63.19 (11) | C4—N8—La1 | 126.3 (3) |
O3—La1—O5ii | 124.85 (11) | C1—N8—La1 | 114.8 (3) |
O1W—La1—O1 | 68.69 (11) | C7—O1—La1 | 122.9 (3) |
O4i—La1—O1 | 122.78 (11) | C7—O1—La1iii | 101.2 (3) |
O6—La1—O1 | 151.51 (12) | La1—O1—La1iii | 119.55 (13) |
O3—La1—O1 | 71.74 (11) | C7—O2—La1iii | 88.8 (3) |
O5ii—La1—O1 | 108.11 (11) | C5—O3—La1 | 120.1 (3) |
O1W—La1—O2W | 130.93 (11) | C5—O4—La1i | 120.6 (3) |
O4i—La1—O2W | 67.57 (12) | C6—O5—La1ii | 121.0 (3) |
O6—La1—O2W | 72.86 (11) | C6—O6—La1 | 121.8 (3) |
O3—La1—O2W | 69.18 (11) | La1—O1W—H1W | 113.1 |
O5ii—La1—O2W | 123.82 (12) | La1—O1W—H2W | 115.0 |
O1—La1—O2W | 126.58 (11) | H1W—O1W—H2W | 107.3 |
O1W—La1—O1iii | 77.11 (11) | La1—O2W—H3W | 111.1 |
O4i—La1—O1iii | 132.53 (11) | La1—O2W—H4W | 123.8 |
O6—La1—O1iii | 114.65 (11) | H3W—O2W—H4W | 106.5 |
O3—La1—O1iii | 75.79 (11) |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x, −y, −z; (iii) −x+1, −y, −z+1. |
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H1W···N1iv | 0.84 | 1.97 | 2.796 (6) | 170 |
O2W—H3W···O2v | 0.84 | 1.94 | 2.737 (5) | 157 |
O1W—H2W···O3iii | 0.84 | 2.05 | 2.874 (5) | 167 |
O2W—H4W···O6vi | 0.84 | 2.09 | 2.825 (5) | 146 |
Symmetry codes: (iii) −x+1, −y, −z+1; (iv) x, y−1, z−1; (v) x, y, z−1; (vi) −x+1, −y, −z. |
Experimental details
Crystal data | |
Chemical formula | [La(C5H3N2O2)(C2O4)(H2O)2] |
Mr | 386.06 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 296 |
a, b, c (Å) | 8.040 (3), 8.7343 (18), 8.8329 (18) |
α, β, γ (°) | 115.552 (2), 101.447 (3), 95.789 (3) |
V (Å3) | 536.1 (3) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 4.02 |
Crystal size (mm) | 0.17 × 0.16 × 0.14 |
Data collection | |
Diffractometer | Bruker APEXII area-detector diffractometer |
Absorption correction | Multi-scan (APEX2; Bruker, 2004) |
Tmin, Tmax | 0.548, 0.603 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 2761, 1898, 1787 |
Rint | 0.020 |
(sin θ/λ)max (Å−1) | 0.599 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.031, 0.078, 1.07 |
No. of reflections | 1898 |
No. of parameters | 163 |
No. of restraints | 6 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 1.61, −1.22 |
Computer programs: APEX2 (Bruker, 2004), SAINT (Bruker, 2004), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEPIII (Burnett & Johnson, 1996), PLATON (Spek, 2003) and SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H1W···N1i | 0.84 | 1.97 | 2.796 (6) | 170.0 |
O2W—H3W···O2ii | 0.84 | 1.94 | 2.737 (5) | 156.8 |
O1W—H2W···O3iii | 0.84 | 2.05 | 2.874 (5) | 166.6 |
O2W—H4W···O6iv | 0.84 | 2.09 | 2.825 (5) | 146.1 |
Symmetry codes: (i) x, y−1, z−1; (ii) x, y, z−1; (iii) −x+1, −y, −z+1; (iv) −x+1, −y, −z. |
Acknowledgements
The authors acknowledge South China Normal University for supporting this work.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The design, synthesis, characterization, and properties of supramolecular networks formed by using functionalized organic molecules as bridges between metal centers are of great interest(Eddaoudi et al., 2001; Rizk et al., 2005; Zeng et al.,2007). As a building block, pyrazine-2-carboxylic acid and oxalic acid are excellent candidates for the construction of supramolecular complexes. Herein, we reported the new coordination polymer, (I).
In (I), each LaIII centre is coordinated by seven oxygen atoms and one nitrogen atom from two pyrazine-2-carboxylate ligands, two oxalate ligands and two water molecules (Fig. 1), and represents a distorted bicapped square antiprismatic geometry. The LaIII ions are linked by pyrazine-2-carboxylate ligands and oxalate ligands to form layers parallel to the (1 0 -1) plane (Fig.2), and the adjacent La···La separations are 6.570 (4) and 4.506 (5) Å, respectively. O—H···O and N—H···O hydrogen bonds (Table 1), involving the pyrazine-2-carboxylate ligands, coordinating water molecules and oxalate ligands assemble neighboring layers into a three-dimensional supramolecular network motif .