organic compounds
(1R,3S)-1,1′-(1,3-Dihydro-2-benzofuran-1,3-diyl)bis(1,3-dimethylurea)
aInstitute of Chemistry, University of the Punjab, Lahore-54590, Pakistan, bDepartment of Chemistry, University of Sargodha, Sargodha, Pakistan, and cDepartment of Physics, University of Sargodha, Sargodha, Pakistan
*Correspondence e-mail: dmntahir_uos@yahoo.com
In the molecule of the title compound, C14H20N4O3, the five-membered ring adopts an with the O atom displaced by 0.207 (3) Å from the plane of the other ring atoms. Intramolecular C—H⋯O hydrogen bonds result in the formation of three five-membered rings having envelope conformations. In the intermolecular N—H⋯O hydrogen bonds link the molecules, forming R22(20) ring motifs, which produce two-dimensional polymeric sheets extending along the b axis. There are also two C—H⋯π interactions. The H atoms of one of the methyl groups are disordered over two positions and were refined with occupancies of 0.50.
Related literature
For general background, see: Veeraraghavan et al. (1996); Lin et al. (2005); Roy & Sarkar (2005); Harper et al. (2003); Tsi & Tan (1997). For related structures, see: Maliha et al. (2007, 2009); Maliha, Hussain et al. (2008); Maliha, Tariq et al. (2008). For ring-motifs, see: Bernstein et al. (1995).For bond lengths and angles in 3-[(2-hydroxy-5-nitrophenyl)amino]-2-benzofuran-1(3H)-one monohydrate, see: Odabaşoğlu & Büyükgüngör (2006).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2007); cell SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997) and PLATON (Spek, 2003); software used to prepare material for publication: WinGX (Farrugia, 1999) and PLATON.
Supporting information
10.1107/S1600536808040828/hk2591sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536808040828/hk2591Isup2.hkl
For the preparation of the title compound, O-phthaldehyde (200 mmol), N,N-dimethylurea (200 mmol) and a few drops of HCl were refluxed in ethanol. Colorless precipitate obtained was crystallized in the solution of methanol:acetone (9:1) by slow evaporation at room temperature.
The hydrogen atoms of the C11 methyl group were disordered over two positions. During the
process the disordered atoms were refined with occupancies of 0.50. H1, H8 (for CH) and H2N, H4N (for NH) atoms were located in difference syntheses and refined [C-H = 0.987 (17) and 1.003 (17) Å, Uiso(H) = 1.2Ueq(C); N-H = 0.806 (19) and 0.858 (18) Å, Uiso(H) = 1.5Ueq(N). The remaining H atoms were positioned geometrically, with C-H = 0.93 and 0.96 Å for aromatic and methyl H, respectively, and constrained to ride on their parent atoms with Uiso(H) = xUeq(C), where x = 1.5 for methyl H and x = 1.2 for aromatic H atoms.Data collection: APEX2 (Bruker, 2007); cell
SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997) and PLATON (Spek, 2003); software used to prepare material for publication: WinGX (Farrugia, 1999) and PLATON (Spek, 2003).Fig. 1. The molecular structure of the title molecule, with the atom-numbering scheme. Displacement ellipsoids are drawn at the 50% probability level. Hydrogen bonds are shown as dashed lines. | |
Fig. 2. A partial packing diagram of the title compound. Hydrogen bonds are shown as dashed lines. |
C14H20N4O3 | F(000) = 1008 |
Mr = 292.34 | Dx = 1.374 Mg m−3 |
Orthorhombic, Pbca | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ac 2ab | Cell parameters from 2741 reflections |
a = 14.6322 (6) Å | θ = 1.9–27.6° |
b = 9.1014 (3) Å | µ = 0.10 mm−1 |
c = 21.2307 (9) Å | T = 296 K |
V = 2827.37 (19) Å3 | Needle, colorless |
Z = 8 | 0.30 × 0.10 × 0.06 mm |
Bruker Kappa APEXII CCD diffractometer | 3257 independent reflections |
Radiation source: fine-focus sealed tube | 2741 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.033 |
Detector resolution: 7.50 pixels mm-1 | θmax = 27.6°, θmin = 1.9° |
ω scans | h = −18→19 |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | k = −11→11 |
Tmin = 0.982, Tmax = 0.989 | l = −27→27 |
19271 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.038 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.150 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.02 | w = 1/[σ2(Fo2) + (0.1147P)2 + 0.2587P] where P = (Fo2 + 2Fc2)/3 |
3257 reflections | (Δ/σ)max = 0.001 |
206 parameters | Δρmax = 0.32 e Å−3 |
0 restraints | Δρmin = −0.30 e Å−3 |
C14H20N4O3 | V = 2827.37 (19) Å3 |
Mr = 292.34 | Z = 8 |
Orthorhombic, Pbca | Mo Kα radiation |
a = 14.6322 (6) Å | µ = 0.10 mm−1 |
b = 9.1014 (3) Å | T = 296 K |
c = 21.2307 (9) Å | 0.30 × 0.10 × 0.06 mm |
Bruker Kappa APEXII CCD diffractometer | 3257 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 2741 reflections with I > 2σ(I) |
Tmin = 0.982, Tmax = 0.989 | Rint = 0.033 |
19271 measured reflections |
R[F2 > 2σ(F2)] = 0.038 | 0 restraints |
wR(F2) = 0.150 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.02 | Δρmax = 0.32 e Å−3 |
3257 reflections | Δρmin = −0.30 e Å−3 |
206 parameters |
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
O1 | 0.41467 (6) | 0.45600 (11) | 0.23235 (4) | 0.0174 (3) | |
O2 | 0.34799 (7) | 0.54659 (10) | 0.39413 (5) | 0.0198 (3) | |
O3 | 0.51470 (7) | 0.55115 (10) | 0.08040 (4) | 0.0182 (3) | |
N1 | 0.34567 (8) | 0.35646 (12) | 0.32370 (5) | 0.0172 (3) | |
N2 | 0.38830 (8) | 0.31870 (14) | 0.42697 (5) | 0.0192 (3) | |
N3 | 0.45143 (8) | 0.35663 (12) | 0.13270 (5) | 0.0166 (3) | |
N4 | 0.58841 (8) | 0.33324 (13) | 0.07804 (6) | 0.0184 (3) | |
C1 | 0.39065 (9) | 0.45278 (15) | 0.16603 (6) | 0.0158 (4) | |
C2 | 0.29157 (9) | 0.40893 (14) | 0.16576 (6) | 0.0156 (4) | |
C3 | 0.23533 (9) | 0.37551 (15) | 0.11520 (7) | 0.0190 (4) | |
C4 | 0.14426 (10) | 0.34209 (16) | 0.12735 (7) | 0.0216 (4) | |
C5 | 0.11093 (9) | 0.34332 (15) | 0.18873 (7) | 0.0202 (4) | |
C6 | 0.16762 (9) | 0.37606 (15) | 0.23927 (7) | 0.0183 (4) | |
C7 | 0.25847 (9) | 0.40992 (15) | 0.22654 (6) | 0.0157 (4) | |
C8 | 0.33352 (9) | 0.45371 (15) | 0.27125 (6) | 0.0161 (3) | |
C9 | 0.35403 (9) | 0.19953 (15) | 0.31148 (6) | 0.0180 (4) | |
C10 | 0.36122 (9) | 0.41503 (15) | 0.38270 (6) | 0.0163 (4) | |
C11 | 0.40137 (10) | 0.36344 (17) | 0.49181 (7) | 0.0229 (4) | |
C12 | 0.45527 (10) | 0.20371 (14) | 0.15296 (7) | 0.0187 (4) | |
C13 | 0.51929 (9) | 0.42070 (14) | 0.09633 (6) | 0.0151 (3) | |
C14 | 0.65525 (9) | 0.38690 (17) | 0.03293 (7) | 0.0216 (4) | |
H1 | 0.3955 (12) | 0.5527 (19) | 0.1483 (8) | 0.0190* | |
H2N | 0.4057 (14) | 0.238 (2) | 0.4170 (9) | 0.0287* | |
H3 | 0.25789 | 0.37544 | 0.07425 | 0.0228* | |
H4 | 0.10534 | 0.31875 | 0.09419 | 0.0259* | |
H4N | 0.5954 (13) | 0.244 (2) | 0.0902 (9) | 0.0276* | |
H5 | 0.04970 | 0.32187 | 0.19602 | 0.0243* | |
H6 | 0.14554 | 0.37537 | 0.28035 | 0.0220* | |
H8 | 0.3231 (12) | 0.5534 (18) | 0.2901 (8) | 0.0193* | |
H9A | 0.32072 | 0.14578 | 0.34289 | 0.0269* | |
H9B | 0.32957 | 0.17763 | 0.27058 | 0.0269* | |
H9C | 0.41729 | 0.17176 | 0.31291 | 0.0269* | |
H11A | 0.37241 | 0.45675 | 0.49861 | 0.0344* | 0.500 |
H11B | 0.37481 | 0.29147 | 0.51934 | 0.0344* | 0.500 |
H11C | 0.46556 | 0.37176 | 0.50047 | 0.0344* | 0.500 |
H11D | 0.43611 | 0.28991 | 0.51367 | 0.0344* | 0.500 |
H11E | 0.43371 | 0.45518 | 0.49294 | 0.0344* | 0.500 |
H11F | 0.34296 | 0.37489 | 0.51181 | 0.0344* | 0.500 |
H12A | 0.49792 | 0.19423 | 0.18707 | 0.0280* | |
H12B | 0.39578 | 0.17296 | 0.16673 | 0.0280* | |
H12C | 0.47463 | 0.14323 | 0.11840 | 0.0280* | |
H14A | 0.68780 | 0.46846 | 0.05079 | 0.0324* | |
H14B | 0.69754 | 0.30969 | 0.02295 | 0.0324* | |
H14C | 0.62456 | 0.41798 | −0.00475 | 0.0324* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0130 (5) | 0.0212 (5) | 0.0180 (5) | −0.0019 (3) | 0.0006 (3) | −0.0010 (4) |
O2 | 0.0210 (5) | 0.0152 (5) | 0.0231 (5) | −0.0014 (4) | 0.0019 (4) | −0.0037 (4) |
O3 | 0.0177 (5) | 0.0155 (5) | 0.0214 (5) | −0.0014 (3) | 0.0001 (4) | 0.0022 (4) |
N1 | 0.0202 (6) | 0.0135 (6) | 0.0179 (6) | 0.0002 (4) | −0.0003 (4) | −0.0011 (4) |
N2 | 0.0206 (6) | 0.0189 (6) | 0.0180 (6) | 0.0029 (4) | −0.0016 (5) | −0.0031 (5) |
N3 | 0.0153 (6) | 0.0130 (5) | 0.0216 (6) | 0.0005 (4) | 0.0032 (4) | 0.0012 (4) |
N4 | 0.0149 (6) | 0.0172 (6) | 0.0232 (6) | 0.0019 (4) | 0.0025 (4) | 0.0031 (5) |
C1 | 0.0149 (6) | 0.0149 (7) | 0.0176 (6) | 0.0004 (5) | 0.0007 (5) | −0.0003 (5) |
C2 | 0.0144 (6) | 0.0121 (6) | 0.0204 (7) | 0.0015 (5) | 0.0001 (5) | 0.0008 (5) |
C3 | 0.0189 (7) | 0.0185 (7) | 0.0195 (6) | 0.0014 (5) | −0.0011 (5) | 0.0009 (5) |
C4 | 0.0184 (7) | 0.0186 (7) | 0.0278 (8) | 0.0001 (5) | −0.0063 (5) | −0.0010 (6) |
C5 | 0.0131 (6) | 0.0157 (7) | 0.0318 (8) | −0.0006 (5) | −0.0009 (5) | −0.0009 (5) |
C6 | 0.0167 (7) | 0.0145 (6) | 0.0238 (7) | 0.0002 (5) | 0.0037 (5) | 0.0001 (5) |
C7 | 0.0151 (6) | 0.0111 (6) | 0.0209 (7) | 0.0009 (5) | 0.0002 (5) | 0.0001 (5) |
C8 | 0.0136 (6) | 0.0154 (6) | 0.0193 (6) | −0.0005 (5) | 0.0013 (5) | 0.0000 (5) |
C9 | 0.0201 (7) | 0.0138 (7) | 0.0200 (6) | −0.0014 (5) | −0.0013 (5) | −0.0008 (5) |
C10 | 0.0115 (6) | 0.0174 (7) | 0.0199 (6) | −0.0020 (5) | 0.0020 (5) | −0.0017 (5) |
C11 | 0.0233 (7) | 0.0261 (8) | 0.0194 (7) | −0.0018 (6) | −0.0034 (5) | −0.0018 (5) |
C12 | 0.0198 (7) | 0.0138 (7) | 0.0224 (6) | 0.0007 (5) | 0.0031 (5) | 0.0016 (5) |
C13 | 0.0136 (6) | 0.0154 (6) | 0.0162 (6) | −0.0012 (5) | −0.0020 (5) | −0.0003 (5) |
C14 | 0.0157 (7) | 0.0251 (8) | 0.0240 (7) | −0.0003 (5) | 0.0036 (5) | 0.0006 (6) |
O1—C1 | 1.4515 (15) | C7—C8 | 1.5053 (18) |
O1—C8 | 1.4465 (16) | C1—H1 | 0.987 (17) |
O2—C10 | 1.2370 (16) | C3—H3 | 0.9300 |
O3—C13 | 1.2363 (16) | C4—H4 | 0.9300 |
N1—C8 | 1.4335 (17) | C5—H5 | 0.9300 |
N1—C9 | 1.4568 (17) | C6—H6 | 0.9300 |
N1—C10 | 1.3802 (17) | C8—H8 | 1.003 (17) |
N2—C10 | 1.3450 (18) | C9—H9A | 0.9600 |
N2—C11 | 1.4482 (18) | C9—H9B | 0.9600 |
N3—C1 | 1.4344 (17) | C9—H9C | 0.9600 |
N3—C12 | 1.4578 (17) | C11—H11A | 0.9600 |
N3—C13 | 1.3864 (17) | C11—H11B | 0.9600 |
N4—C13 | 1.3444 (18) | C11—H11C | 0.9600 |
N4—C14 | 1.4534 (19) | C11—H11D | 0.9600 |
N2—H2N | 0.806 (19) | C11—H11E | 0.9600 |
N4—H4N | 0.858 (18) | C11—H11F | 0.9600 |
C1—C2 | 1.5037 (19) | C12—H12A | 0.9600 |
C2—C7 | 1.3783 (18) | C12—H12B | 0.9600 |
C2—C3 | 1.3863 (19) | C12—H12C | 0.9600 |
C3—C4 | 1.391 (2) | C14—H14A | 0.9600 |
C4—C5 | 1.392 (2) | C14—H14B | 0.9600 |
C5—C6 | 1.389 (2) | C14—H14C | 0.9600 |
C6—C7 | 1.3911 (19) | ||
O2···C12i | 3.3662 (18) | H1···C4iv | 2.734 (17) |
O2···N4i | 2.8322 (15) | H1···C5iv | 2.782 (17) |
O3···N2i | 2.8229 (16) | H2N···C9 | 2.390 (19) |
O3···C9i | 3.2836 (16) | H2N···H9A | 2.1700 |
O1···H5ii | 2.7800 | H2N···H9C | 2.3000 |
O1···H12A | 2.8400 | H2N···O3vi | 2.062 (19) |
O2···H11A | 2.3900 | H3···H11Bvii | 2.5700 |
O2···H11E | 2.5800 | H4N···C12 | 2.473 (19) |
O2···H8 | 2.239 (17) | H4N···H12A | 2.5400 |
O2···H14Aiii | 2.7100 | H4N···H12C | 2.0800 |
O2···H9Aiv | 2.8400 | H4N···O2vi | 2.006 (18) |
O2···H4Ni | 2.006 (18) | H5···O1iii | 2.7800 |
O2···H12Ci | 2.7500 | H5···C9iii | 3.0800 |
O3···H14C | 2.7100 | H5···H9Ciii | 2.3800 |
O3···H1 | 2.263 (17) | H6···C9iv | 3.0200 |
O3···H14A | 2.7200 | H8···O2 | 2.239 (17) |
O3···H2Ni | 2.062 (19) | H8···C9iv | 2.948 (17) |
O3···H9Ci | 2.7100 | H8···H9Aiv | 2.5300 |
O3···H14Cv | 2.6100 | H8···H9Biv | 2.5400 |
N2···O3vi | 2.8229 (16) | H9A···N2 | 2.5800 |
N4···O2vi | 2.8322 (15) | H9A···H2N | 2.1700 |
N2···H9A | 2.5800 | H9A···O2viii | 2.8400 |
N2···H9C | 2.8000 | H9A···H8viii | 2.5300 |
N3···H11Dvii | 2.8700 | H9B···C6 | 3.0500 |
N4···H12C | 2.5500 | H9B···C7 | 2.5400 |
N4···H11Dvii | 2.8400 | H9B···H12B | 2.4100 |
C1···C5iv | 3.5871 (19) | H9B···C6viii | 2.8200 |
C5···C12iv | 3.5034 (19) | H9B···C7viii | 2.9100 |
C5···C1viii | 3.5871 (19) | H9B···H8viii | 2.5400 |
C6···C9iv | 3.3344 (19) | H9C···N2 | 2.8000 |
C6···C9 | 3.5173 (19) | H9C···H2N | 2.3000 |
C7···C9iv | 3.5930 (19) | H9C···O3vi | 2.7100 |
C9···C7viii | 3.5930 (19) | H9C···H5ii | 2.3800 |
C9···O3vi | 3.2836 (16) | H11A···O2 | 2.3900 |
C9···C6viii | 3.3344 (19) | H11B···C12ix | 3.0700 |
C9···C6 | 3.5173 (19) | H11B···H3ix | 2.5700 |
C10···C14iii | 3.5153 (19) | H11C···H12Cix | 2.5100 |
C11···C12ix | 3.564 (2) | H11D···N3ix | 2.8700 |
C12···O2vi | 3.3662 (18) | H11D···N4ix | 2.8400 |
C12···C11vii | 3.564 (2) | H11D···C12ix | 2.9700 |
C12···C5viii | 3.5034 (19) | H11D···C13ix | 2.8700 |
C14···C10ii | 3.5153 (19) | H11D···H12Cix | 2.3700 |
C2···H12B | 2.6300 | H11E···O2 | 2.5800 |
C4···H1viii | 2.734 (17) | H11E···C11x | 2.9400 |
C5···H12Biv | 3.0400 | H11F···C14iii | 2.9100 |
C5···H1viii | 2.782 (17) | H11F···H14Biii | 2.3300 |
C6···H9Biv | 2.8200 | H12A···O1 | 2.8400 |
C6···H9B | 3.0500 | H12A···H4N | 2.5400 |
C7···H9Biv | 2.9100 | H12B···C2 | 2.6300 |
C7···H9B | 2.5400 | H12B···H9B | 2.4100 |
C9···H8viii | 2.948 (17) | H12B···C5viii | 3.0400 |
C9···H5ii | 3.0800 | H12C···N4 | 2.5500 |
C9···H6viii | 3.0200 | H12C···H4N | 2.0800 |
C9···H2N | 2.390 (19) | H12C···O2vi | 2.7500 |
C10···H14Aiii | 2.9400 | H12C···C11vii | 2.8900 |
C11···H14Biii | 3.0400 | H12C···H11Cvii | 2.5100 |
C11···H12Cix | 2.8900 | H12C···H11Dvii | 2.3700 |
C11···H11Ex | 2.9400 | H14A···O3 | 2.7200 |
C12···H11Bvii | 3.0700 | H14A···O2ii | 2.7100 |
C12···H11Dvii | 2.9700 | H14A···C10ii | 2.9400 |
C12···H4N | 2.473 (19) | H14B···C11ii | 3.0400 |
C13···H11Dvii | 2.8700 | H14B···H11Fii | 2.3300 |
C14···H11Fii | 2.9100 | H14C···O3 | 2.7100 |
H1···O3 | 2.263 (17) | H14C···O3v | 2.6100 |
C1—O1—C8 | 110.78 (9) | C5—C6—H6 | 121.00 |
C8—N1—C9 | 118.52 (10) | C7—C6—H6 | 121.00 |
C8—N1—C10 | 119.14 (11) | O1—C8—H8 | 109.8 (10) |
C9—N1—C10 | 121.77 (11) | N1—C8—H8 | 105.5 (10) |
C10—N2—C11 | 121.32 (12) | C7—C8—H8 | 112.3 (10) |
C1—N3—C12 | 117.44 (11) | N1—C9—H9A | 109.00 |
C1—N3—C13 | 117.53 (11) | N1—C9—H9B | 109.00 |
C12—N3—C13 | 122.57 (11) | N1—C9—H9C | 109.00 |
C13—N4—C14 | 119.84 (12) | H9A—C9—H9B | 109.00 |
C10—N2—H2N | 120.3 (14) | H9A—C9—H9C | 109.00 |
C11—N2—H2N | 117.7 (14) | H9B—C9—H9C | 109.00 |
C13—N4—H4N | 124.3 (13) | N2—C11—H11A | 109.00 |
C14—N4—H4N | 115.9 (13) | N2—C11—H11B | 109.00 |
O1—C1—N3 | 109.92 (10) | N2—C11—H11C | 109.00 |
O1—C1—C2 | 104.04 (10) | N2—C11—H11D | 109.00 |
N3—C1—C2 | 115.72 (11) | N2—C11—H11E | 109.00 |
C1—C2—C7 | 109.48 (11) | N2—C11—H11F | 109.00 |
C3—C2—C7 | 121.18 (12) | H11A—C11—H11B | 109.00 |
C1—C2—C3 | 129.31 (12) | H11A—C11—H11C | 109.00 |
C2—C3—C4 | 118.23 (13) | H11A—C11—H11D | 141.00 |
C3—C4—C5 | 120.51 (13) | H11A—C11—H11E | 56.00 |
C4—C5—C6 | 121.07 (13) | H11A—C11—H11F | 56.00 |
C5—C6—C7 | 117.92 (13) | H11B—C11—H11C | 109.00 |
C2—C7—C8 | 109.62 (11) | H11B—C11—H11D | 56.00 |
C6—C7—C8 | 129.29 (12) | H11B—C11—H11E | 141.00 |
C2—C7—C6 | 121.08 (12) | H11B—C11—H11F | 56.00 |
O1—C8—N1 | 110.52 (11) | H11C—C11—H11D | 56.00 |
O1—C8—C7 | 104.04 (10) | H11C—C11—H11E | 56.00 |
N1—C8—C7 | 114.64 (11) | H11C—C11—H11F | 141.00 |
O2—C10—N1 | 121.74 (12) | H11D—C11—H11E | 109.00 |
O2—C10—N2 | 122.68 (12) | H11D—C11—H11F | 109.00 |
N1—C10—N2 | 115.53 (12) | H11E—C11—H11F | 109.00 |
O3—C13—N4 | 122.04 (12) | N3—C12—H12A | 109.00 |
N3—C13—N4 | 116.78 (11) | N3—C12—H12B | 109.00 |
O3—C13—N3 | 121.16 (12) | N3—C12—H12C | 109.00 |
O1—C1—H1 | 109.5 (10) | H12A—C12—H12B | 109.00 |
N3—C1—H1 | 109.2 (10) | H12A—C12—H12C | 109.00 |
C2—C1—H1 | 108.2 (10) | H12B—C12—H12C | 109.00 |
C2—C3—H3 | 121.00 | N4—C14—H14A | 109.00 |
C4—C3—H3 | 121.00 | N4—C14—H14B | 109.00 |
C3—C4—H4 | 120.00 | N4—C14—H14C | 109.00 |
C5—C4—H4 | 120.00 | H14A—C14—H14B | 109.00 |
C4—C5—H5 | 119.00 | H14A—C14—H14C | 109.00 |
C6—C5—H5 | 119.00 | H14B—C14—H14C | 109.00 |
C8—O1—C1—N3 | −138.76 (11) | C14—N4—C13—O3 | −6.6 (2) |
C8—O1—C1—C2 | −14.26 (13) | C14—N4—C13—N3 | 171.61 (12) |
C1—O1—C8—N1 | 137.61 (11) | O1—C1—C2—C3 | −173.35 (13) |
C1—O1—C8—C7 | 14.08 (13) | O1—C1—C2—C7 | 8.71 (14) |
C9—N1—C8—O1 | −66.82 (14) | N3—C1—C2—C3 | −52.67 (19) |
C9—N1—C8—C7 | 50.35 (16) | N3—C1—C2—C7 | 129.39 (12) |
C10—N1—C8—O1 | 104.63 (13) | C1—C2—C3—C4 | −178.04 (13) |
C10—N1—C8—C7 | −138.20 (12) | C7—C2—C3—C4 | −0.3 (2) |
C8—N1—C10—O2 | 13.95 (19) | C1—C2—C7—C6 | 178.74 (12) |
C8—N1—C10—N2 | −168.36 (12) | C1—C2—C7—C8 | −0.30 (15) |
C9—N1—C10—O2 | −174.89 (12) | C3—C2—C7—C6 | 0.6 (2) |
C9—N1—C10—N2 | 2.80 (18) | C3—C2—C7—C8 | −178.44 (12) |
C11—N2—C10—O2 | 1.7 (2) | C2—C3—C4—C5 | 0.4 (2) |
C11—N2—C10—N1 | −176.00 (12) | C3—C4—C5—C6 | −0.8 (2) |
C12—N3—C1—O1 | 58.72 (15) | C4—C5—C6—C7 | 1.0 (2) |
C12—N3—C1—C2 | −58.73 (15) | C5—C6—C7—C2 | −0.9 (2) |
C13—N3—C1—O1 | −103.94 (13) | C5—C6—C7—C8 | 177.90 (13) |
C13—N3—C1—C2 | 138.62 (12) | C2—C7—C8—O1 | −8.26 (14) |
C1—N3—C13—O3 | −17.51 (18) | C2—C7—C8—N1 | −129.07 (12) |
C1—N3—C13—N4 | 164.25 (12) | C6—C7—C8—O1 | 172.81 (13) |
C12—N3—C13—O3 | −179.21 (12) | C6—C7—C8—N1 | 51.99 (19) |
C12—N3—C13—N4 | 2.54 (18) |
Symmetry codes: (i) −x+1, y+1/2, −z+1/2; (ii) x+1/2, y, −z+1/2; (iii) x−1/2, y, −z+1/2; (iv) −x+1/2, y+1/2, z; (v) −x+1, −y+1, −z; (vi) −x+1, y−1/2, −z+1/2; (vii) x, −y+1/2, z−1/2; (viii) −x+1/2, y−1/2, z; (ix) x, −y+1/2, z+1/2; (x) −x+1, −y+1, −z+1. |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2N···O3vi | 0.806 (19) | 2.062 (19) | 2.8229 (16) | 157.4 (19) |
N4—H4N···O2vi | 0.858 (18) | 2.006 (18) | 2.8322 (15) | 161.2 (18) |
C1—H1···O3 | 0.987 (17) | 2.263 (17) | 2.7205 (16) | 107.0 (12) |
C8—H8···O2 | 1.003 (17) | 2.239 (17) | 2.7505 (17) | 110.1 (12) |
C11—H11A···O2 | 0.96 | 2.39 | 2.7730 (18) | 103.0 |
C9—H9B···CgA | 0.96 | 2.6600 | 3.0207 (14) | 103.0 |
C12—H12B···CgA | 0.96 | 2.7200 | 3.0046 (15) | 98.0 |
Symmetry code: (vi) −x+1, y−1/2, −z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C14H20N4O3 |
Mr | 292.34 |
Crystal system, space group | Orthorhombic, Pbca |
Temperature (K) | 296 |
a, b, c (Å) | 14.6322 (6), 9.1014 (3), 21.2307 (9) |
V (Å3) | 2827.37 (19) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.10 |
Crystal size (mm) | 0.30 × 0.10 × 0.06 |
Data collection | |
Diffractometer | Bruker Kappa APEXII CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.982, 0.989 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 19271, 3257, 2741 |
Rint | 0.033 |
(sin θ/λ)max (Å−1) | 0.652 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.038, 0.150, 1.02 |
No. of reflections | 3257 |
No. of parameters | 206 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.32, −0.30 |
Computer programs: APEX2 (Bruker, 2007), SAINT (Bruker, 2007), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 1997) and PLATON (Spek, 2003), WinGX (Farrugia, 1999) and PLATON (Spek, 2003).
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2N···O3i | 0.806 (19) | 2.062 (19) | 2.8229 (16) | 157.4 (19) |
N4—H4N···O2i | 0.858 (18) | 2.006 (18) | 2.8322 (15) | 161.2 (18) |
C1—H1···O3 | 0.987 (17) | 2.263 (17) | 2.7205 (16) | 107.0 (12) |
C8—H8···O2 | 1.003 (17) | 2.239 (17) | 2.7505 (17) | 110.1 (12) |
C11—H11A···O2 | 0.96 | 2.39 | 2.7730 (18) | 103.0 |
C9—H9B···CgA | 0.96 | 2.6600 | 3.0207 (14) | 103.0 |
C12—H12B···CgA | 0.96 | 2.7200 | 3.0046 (15) | 98.0 |
Symmetry code: (i) −x+1, y−1/2, −z+1/2. |
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Isobenzofurans exhibit anticonvulsant, antitumour and antiasthamatic properties (Veeraraghavan et al., 1996). These compounds have several biological activities, such as antioxidant, antimycotic, cytotoxic, antimicrobial, herbicidal, analgesic and pesticidal activities (Lin et al., 2005, Roy & Sarkar, 2005, Harper et al., 2003). These are known to exhibit hypotensive and vasorelaxant properties (Tsi & Tan, 1997). We report herein the synthesis and crystal structure of the title compound. This study is in countinuation to the formation of derivatives of O-phthaldehyde with different ureas (Maliha et al., 2007; Maliha, Hussain et al., 2008; Maliha, Tariq et al., 2008).
The molecule of the title compound is essentially symmetric about the mirror plane passing through the O1 atom of the 2-benzofuran ring system as far as the chemical structure is concerned. But, the intramolecular C-H···O hydrogen bonds (Table 1) disturb this symmetry. Due to this reason, there exist R and S-configurations at C1 and C8 atoms, respectively. The bond legths and angles in the 2-benzofuran ring system are in accordance with the corresponding values in 3-[(2-Hydroxy-5-nitrophenyl)amino]-2-benzofuran-1(3H)-one monohydrate (Odabaşoĝlu & Büyükgüngör, 2006). Ring B (C2-C7) is, of course, planar, while the five-membered ring A (O1/C1/C2/C7/C8) adopts envelope conformation with O1 atom displaced by -0.207 (3) Å from the plane of the other ring atoms. The intramolecular C-H···O hydrogen bonds (Table 1) result in the formation of three five-membered rings: C (O3/N3/C1/C13/H1), D (O2/N1/C8/C10/H8) and E (O2/N2/C10/C11/H11A), having envelope conformations with N3, N1 and H11A atoms displaced by 0.191 (3), -0.155 (3) and -0.265 (3) Å from the planes of the other rings atoms, respectively.
In the crystal structure, intermolecular N-H···O hydrogen bonds (Table 1) link the molecules to form R22(20) ring motifs (Bernstein et al., 1995), which are joint in such a fashion that the 2-benzofuran rings are in cis and trans positions. They produce two dimensional polymeric sheets extending along the b axis (Fig 2). There also exist two C–H···π interactions (Table 1).