organic compounds
Diethyl 6H,12H-5,11-methanodibenzo[b,f][1,5]diazocine-1,7-dicarboxylate
aDepartment of Chemistry and Biomolecular Sciences, Building F7B, Macquarie University, NSW 2109, Australia, and bCrystal Structure Analysis Facility, School of Chemistry, F11, The University of Sydney, NSW 2006, Australia
*Correspondence e-mail: andrew.try@mq.edu.au
In the molecule of the title compound, C21H22N2O4, the 1,7-diethyl ester analogue of Tröger's base, the dihedral angle between the two benzene rings is 93.16 (3)°; the molecule is C2 symmetric.
Related literature
For background to the synthesis of Tröger's base products, see: Hansson et al. (2003); Solano et al. (2005); Bhuiyan et al. (2007); Didier & Sergeyev (2007); Zhu et al. (2008); Vande Velde et al. (2008). For related structures, see: Faroughi et al. (2006); Bhuiyan et al. (2006).
Experimental
Crystal data
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Data collection: SMART (Siemens, 1995); cell SAINT (Siemens, 1995); data reduction: SAINT and XPREP (Siemens, 1995); program(s) used to solve structure: SIR97 (Altomare et al. 1999); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and WinGX32 (Farrugia, 1999); software used to prepare material for publication: enCIFer (Allen et al., 2004).
Supporting information
10.1107/S1600536808042967/zl2169sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536808042967/zl2169Isup2.hkl
Ethyl 3-aminobenzoate (2.0 g, 12.1 mmol) and paraformaldehyde (582 mg, 19.38 mmol) were dissolved in trifluoroacetic acid (75 ml) and the mixture was stirred under an argon atmosphere in the dark 7 days. The reaction mixture was then basified with a solution of concentrated ammonia (80 ml) in water (120 ml). A saturated sodium hydrogen carbonate solution (100 ml) was added and the crude material was extracted into ethyl acetate (3 × 75 ml). The combined organic layers were washed with brine (100 ml), dried over anhydrous sodium sulfate, filtered and evaporated to dryness to yield an orange solid. The crude material was purified by recrystallization from hexane to afford the title compound (760 mg, 34%) as a white solid and a
m.p. 441–443 K.Single crystals of the title compound were produced by slow evaporation of a dichloromethane solution.
C-bound H atoms were included in idealized positions and refined using a riding model. Methylene, aromatic and methyl C—H bond lengths were fixed at 0.99, 0.95 and 0.98 Å, respectively. Uiso(H) values were fixed at 1.2Ueq(C) for methylene and aromatic H atoms, and at 1.5Ueq(C) for methyl H atoms.
Data collection: SMART (Siemens, 1995); cell
SAINT (Siemens, 1995); data reduction: SAINT and XPREP (Siemens, 1995); program(s) used to solve structure: SIR97 (Altomare et al. 1999); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and WinGX32 (Farrugia, 1999); software used to prepare material for publication: enCIFer (Allen et al., 2004).C21H22N2O4 | F(000) = 776 |
Mr = 366.41 | Dx = 1.383 Mg m−3 |
Monoclinic, C2/c | Melting point: 441 K |
Hall symbol: -C 2yc | Mo Kα radiation, λ = 0.71073 Å |
a = 14.306 (3) Å | Cell parameters from 5209 reflections |
b = 9.251 (2) Å | θ = 2.7–28.5° |
c = 15.081 (4) Å | µ = 0.10 mm−1 |
β = 118.149 (4)° | T = 150 K |
V = 1759.8 (7) Å3 | Shard, colourless |
Z = 4 | 0.47 × 0.30 × 0.19 mm |
Bruker SMART 1000 CCD diffractometer | 2135 independent reflections |
Radiation source: sealed tube | 1925 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.020 |
ω scans | θmax = 28.5°, θmin = 2.7° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −19→19 |
Tmin = 0.856, Tmax = 0.980 | k = −12→11 |
8475 measured reflections | l = −20→20 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.036 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.099 | H-atom parameters constrained |
S = 1.04 | w = 1/[σ2(Fo2) + (0.0513P)2 + 1.146P] where P = (Fo2 + 2Fc2)/3 |
2135 reflections | (Δ/σ)max = 0.001 |
124 parameters | Δρmax = 0.33 e Å−3 |
0 restraints | Δρmin = −0.19 e Å−3 |
C21H22N2O4 | V = 1759.8 (7) Å3 |
Mr = 366.41 | Z = 4 |
Monoclinic, C2/c | Mo Kα radiation |
a = 14.306 (3) Å | µ = 0.10 mm−1 |
b = 9.251 (2) Å | T = 150 K |
c = 15.081 (4) Å | 0.47 × 0.30 × 0.19 mm |
β = 118.149 (4)° |
Bruker SMART 1000 CCD diffractometer | 2135 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 1925 reflections with I > 2σ(I) |
Tmin = 0.856, Tmax = 0.980 | Rint = 0.020 |
8475 measured reflections |
R[F2 > 2σ(F2)] = 0.036 | 0 restraints |
wR(F2) = 0.099 | H-atom parameters constrained |
S = 1.04 | Δρmax = 0.33 e Å−3 |
2135 reflections | Δρmin = −0.19 e Å−3 |
124 parameters |
Experimental. The crystal was coated in Exxon Paratone N hydrocarbon oil and mounted on a thin mohair fibre attached to a copper pin. Upon mounting on the diffractometer, the crystal was quenched to 150(K) under a cold nitrogen gas stream supplied by an Oxford Cryosystems Cryostream and data were collected at this temperature. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
C1 | 0.83967 (10) | 0.37215 (14) | 1.11492 (10) | 0.0346 (3) | |
H1A | 0.7669 | 0.4024 | 1.0692 | 0.052* | |
H1B | 0.8563 | 0.3944 | 1.1844 | 0.052* | |
H1C | 0.8465 | 0.2679 | 1.1081 | 0.052* | |
C2 | 0.91539 (9) | 0.45165 (12) | 1.08889 (8) | 0.0291 (2) | |
H2A | 0.9125 | 0.5564 | 1.1007 | 0.035* | |
H2B | 0.9886 | 0.4177 | 1.1328 | 0.035* | |
C3 | 0.92507 (8) | 0.30443 (11) | 0.96454 (8) | 0.0217 (2) | |
C4 | 0.88028 (8) | 0.27735 (11) | 0.85453 (8) | 0.0205 (2) | |
C5 | 0.92893 (8) | 0.17644 (10) | 0.81900 (8) | 0.0194 (2) | |
C6 | 0.87857 (8) | 0.14597 (11) | 0.71558 (8) | 0.0201 (2) | |
C7 | 0.78414 (8) | 0.21655 (12) | 0.65048 (8) | 0.0238 (2) | |
H7 | 0.7503 | 0.1941 | 0.5808 | 0.029* | |
C8 | 0.73945 (8) | 0.31834 (12) | 0.68617 (8) | 0.0262 (2) | |
H8 | 0.6764 | 0.3673 | 0.6411 | 0.031* | |
C9 | 0.78727 (8) | 0.34861 (12) | 0.78832 (8) | 0.0242 (2) | |
H9 | 0.7566 | 0.4180 | 0.8133 | 0.029* | |
C10 | 1.03523 (8) | 0.10512 (11) | 0.88716 (8) | 0.0211 (2) | |
H10A | 1.0846 | 0.1783 | 0.9335 | 0.025* | |
H10B | 1.0250 | 0.0294 | 0.9282 | 0.025* | |
C11 | 1.0000 | −0.05009 (15) | 0.7500 | 0.0236 (3) | |
H11A | 0.9674 | −0.1129 | 0.7810 | 0.028* | 0.50 |
H11B | 1.0326 | −0.1129 | 0.7190 | 0.028* | 0.50 |
N1 | 0.91816 (7) | 0.03970 (9) | 0.67236 (6) | 0.0214 (2) | |
O1 | 0.88792 (6) | 0.42718 (8) | 0.98415 (6) | 0.02669 (19) | |
O2 | 0.98621 (6) | 0.22448 (9) | 1.02960 (6) | 0.0285 (2) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0422 (7) | 0.0347 (6) | 0.0350 (6) | −0.0024 (5) | 0.0249 (5) | −0.0045 (5) |
C2 | 0.0339 (6) | 0.0266 (5) | 0.0284 (5) | −0.0023 (4) | 0.0161 (5) | −0.0066 (4) |
C3 | 0.0205 (5) | 0.0209 (5) | 0.0272 (5) | −0.0007 (4) | 0.0142 (4) | 0.0015 (4) |
C4 | 0.0195 (5) | 0.0198 (5) | 0.0247 (5) | −0.0003 (4) | 0.0124 (4) | 0.0025 (4) |
C5 | 0.0178 (4) | 0.0174 (4) | 0.0246 (5) | −0.0002 (3) | 0.0113 (4) | 0.0032 (4) |
C6 | 0.0186 (4) | 0.0182 (4) | 0.0256 (5) | −0.0032 (4) | 0.0121 (4) | 0.0005 (4) |
C7 | 0.0192 (5) | 0.0274 (5) | 0.0234 (5) | −0.0028 (4) | 0.0090 (4) | 0.0014 (4) |
C8 | 0.0182 (5) | 0.0294 (5) | 0.0293 (5) | 0.0037 (4) | 0.0097 (4) | 0.0062 (4) |
C9 | 0.0210 (5) | 0.0240 (5) | 0.0305 (5) | 0.0039 (4) | 0.0146 (4) | 0.0033 (4) |
C10 | 0.0208 (5) | 0.0206 (5) | 0.0230 (5) | 0.0031 (4) | 0.0113 (4) | 0.0027 (4) |
C11 | 0.0254 (7) | 0.0177 (6) | 0.0296 (7) | 0.000 | 0.0145 (6) | 0.000 |
N1 | 0.0215 (4) | 0.0191 (4) | 0.0257 (4) | −0.0021 (3) | 0.0128 (4) | −0.0009 (3) |
O1 | 0.0322 (4) | 0.0230 (4) | 0.0277 (4) | 0.0043 (3) | 0.0165 (3) | 0.0007 (3) |
O2 | 0.0307 (4) | 0.0292 (4) | 0.0258 (4) | 0.0078 (3) | 0.0135 (3) | 0.0048 (3) |
C1—C2 | 1.5065 (17) | C6—C7 | 1.4014 (14) |
C1—H1A | 0.9800 | C6—N1 | 1.4354 (13) |
C1—H1B | 0.9800 | C7—C8 | 1.3820 (16) |
C1—H1C | 0.9800 | C7—H7 | 0.9500 |
C2—O1 | 1.4544 (13) | C8—C9 | 1.3876 (16) |
C2—H2A | 0.9900 | C8—H8 | 0.9500 |
C2—H2B | 0.9900 | C9—H9 | 0.9500 |
C3—O2 | 1.2103 (13) | C10—N1i | 1.4770 (13) |
C3—O1 | 1.3445 (13) | C10—H10A | 0.9900 |
C3—C4 | 1.4909 (15) | C10—H10B | 0.9900 |
C4—C9 | 1.3959 (14) | C11—N1 | 1.4623 (12) |
C4—C5 | 1.4124 (14) | C11—H11A | 0.9900 |
C5—C6 | 1.4039 (15) | C11—H11B | 0.9900 |
C5—C10 | 1.5262 (13) | ||
C2—C1—H1A | 109.5 | C8—C7—H7 | 119.5 |
C2—C1—H1B | 109.5 | C6—C7—H7 | 119.5 |
H1A—C1—H1B | 109.5 | C7—C8—C9 | 119.58 (10) |
C2—C1—H1C | 109.5 | C7—C8—H8 | 120.2 |
H1A—C1—H1C | 109.5 | C9—C8—H8 | 120.2 |
H1B—C1—H1C | 109.5 | C8—C9—C4 | 120.20 (10) |
O1—C2—C1 | 110.36 (9) | C8—C9—H9 | 119.9 |
O1—C2—H2A | 109.6 | C4—C9—H9 | 119.9 |
C1—C2—H2A | 109.6 | N1i—C10—C5 | 111.09 (8) |
O1—C2—H2B | 109.6 | N1i—C10—H10A | 109.4 |
C1—C2—H2B | 109.6 | C5—C10—H10A | 109.4 |
H2A—C2—H2B | 108.1 | N1i—C10—H10B | 109.4 |
O2—C3—O1 | 123.18 (10) | C5—C10—H10B | 109.4 |
O2—C3—C4 | 124.49 (10) | H10A—C10—H10B | 108.0 |
O1—C3—C4 | 112.31 (9) | N1i—C11—N1 | 110.77 (11) |
C9—C4—C5 | 120.99 (10) | N1i—C11—H11A | 109.5 |
C9—C4—C3 | 118.74 (9) | N1—C11—H11A | 109.5 |
C5—C4—C3 | 120.21 (9) | N1i—C11—H11B | 109.5 |
C6—C5—C4 | 117.88 (9) | N1—C11—H11B | 109.5 |
C6—C5—C10 | 119.18 (9) | H11A—C11—H11B | 108.1 |
C4—C5—C10 | 122.88 (9) | C6—N1—C11 | 111.33 (8) |
C7—C6—C5 | 120.31 (9) | C6—N1—C10i | 112.54 (8) |
C7—C6—N1 | 117.22 (9) | C11—N1—C10i | 107.39 (7) |
C5—C6—N1 | 122.43 (9) | C3—O1—C2 | 115.98 (8) |
C8—C7—C6 | 120.98 (10) | ||
O2—C3—C4—C9 | 159.42 (10) | C7—C8—C9—C4 | 0.40 (16) |
O1—C3—C4—C9 | −19.11 (13) | C5—C4—C9—C8 | 1.66 (16) |
O2—C3—C4—C5 | −17.78 (16) | C3—C4—C9—C8 | −175.52 (10) |
O1—C3—C4—C5 | 163.70 (9) | C6—C5—C10—N1i | 13.93 (12) |
C9—C4—C5—C6 | −2.43 (14) | C4—C5—C10—N1i | −163.33 (9) |
C3—C4—C5—C6 | 174.70 (9) | C7—C6—N1—C11 | −165.60 (8) |
C9—C4—C5—C10 | 174.85 (9) | C5—C6—N1—C11 | 12.31 (12) |
C3—C4—C5—C10 | −8.01 (14) | C7—C6—N1—C10i | 73.76 (11) |
C4—C5—C6—C7 | 1.21 (14) | C5—C6—N1—C10i | −108.32 (10) |
C10—C5—C6—C7 | −176.18 (9) | N1i—C11—N1—C6 | −51.41 (6) |
C4—C5—C6—N1 | −176.64 (8) | N1i—C11—N1—C10i | 72.21 (6) |
C10—C5—C6—N1 | 5.97 (14) | O2—C3—O1—C2 | −7.03 (15) |
C5—C6—C7—C8 | 0.80 (15) | C4—C3—O1—C2 | 171.51 (8) |
N1—C6—C7—C8 | 178.76 (9) | C1—C2—O1—C3 | −83.19 (12) |
C6—C7—C8—C9 | −1.62 (16) |
Symmetry code: (i) −x+2, y, −z+3/2. |
Experimental details
Crystal data | |
Chemical formula | C21H22N2O4 |
Mr | 366.41 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 150 |
a, b, c (Å) | 14.306 (3), 9.251 (2), 15.081 (4) |
β (°) | 118.149 (4) |
V (Å3) | 1759.8 (7) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.10 |
Crystal size (mm) | 0.47 × 0.30 × 0.19 |
Data collection | |
Diffractometer | Bruker SMART 1000 CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.856, 0.980 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 8475, 2135, 1925 |
Rint | 0.020 |
(sin θ/λ)max (Å−1) | 0.671 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.036, 0.099, 1.04 |
No. of reflections | 2135 |
No. of parameters | 124 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.33, −0.19 |
Computer programs: SMART (Siemens, 1995), SAINT (Siemens, 1995), SAINT and XPREP (Siemens, 1995), SIR97 (Altomare et al. 1999), SHELXL97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997) and WinGX32 (Farrugia, 1999), enCIFer (Allen et al., 2004).
Acknowledgements
The authors thank the Australian Research Council for a Discovery Project grant to ACT (DP0345180) and Macquarie University for the award of a Macquarie University Research Development grant to ACT and the award of an iMURS grant to MDHB.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Dibenzo Tröger's base analogues are formed from the acid catalysed condensation of an aniline with either formaldehyde or formaldehyde equivalents. It was a long-held belief that a para-substituent was required on the aniline to prevent polymerization during the Tröger's base reaction and that the presence of an electron-withdrawing group would result in neglible yields of Tröger's base products. These beliefs have been proved to be incorrect, with the synthesis of tetranitro- (Bhuiyan et al., 2007) and octafluoro- (Vande Velde et al., 2008) analogues (in yields of 11% and 37%, respectively), and the synthesis of Tröger's base analogues from 2- and 3-substituted anilines lacking a substitutent in the para-position (Hansson et al., 2003), and even from aniline itself (Didier & Sergeyev, 2007). The title compound is another example of a Tröger's base analogue unsubstituted in the 2,8-positions. An important feature of all Tröger's base analogues is the V-shaped structure of the compounds. The dihedral angle between the aromatic rings has been measured for over 25 simple dibenzo Tröger's base analogues and has been found to lie between 82° (Solano et al., 2005) and 110° (Zhu et al., 2008). The X-ray structures of two related Tröger's base esters have also been reported (Faroughi et al., 2006; Bhuiyan et al., 2006). It is noteworthy that the title compound was the sole Tröger's base analogue isolated from the reaction and results from carbon-carbon bond formation at the more hindered ortho-site, relative to the aniline amino group.
The title compound, Fig. 1, crystallizes in space group C2/c and it was prepared as outlined in Fig. 2.