organic compounds
(Z,E,Z)-1,6-Di-1-naphthylhexa-1,3,5-triene
aNanotechnology Research Institute, National Institute of Advanced Industrial Science and Technology (AIST), 1-1-1 Higashi, Tsukuba, Ibaraki 305-8565, Japan, and bTechnical Center, AIST, 1-1-1 Higashi, Tsukuba, Ibaraki 305-8565, Japan
*Correspondence e-mail: y.sonoda@aist.go.jp
The title compound, C26H20, lies about an inversion centre. The naphthalene unit and the hexatriene chain are each approximately planar (maximum deviations of 0.0143 and 0.0042 Å, respectively), and are inclined to one another at a dihedral angle of 49.20 (4)°. The dihedral angle between the two naphthalene ring systems of neighboring molecules is 85.71 (4)°.
Related literature
For the potential use of α,ω-diarylpolyenes as non-linear optical materials, see: Geskin et al. (2003); Rumi et al. (2000). For a study of the relationship between the and the photophysical properties of 1,6-diarylhexa-1,3,5-trienes, see: Sonoda et al. (2006); Sonoda, Goto et al. (2007). For related structures, see: Aldoshin et al. (1984); Sonoda et al. (2005); Sonoda, Tsuzuki et al. (2007).
Experimental
Crystal data
|
Data collection: SMART (Bruker, 2001); cell SAINT (Bruker, 2001); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536809000592/at2699sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809000592/at2699Isup2.hkl
Compound (I) was synthesized by the Wittig reaction of 1-naphthaldehyde and (E)-but-2-ene-1,4-bis(triphenylphosphonium chloride). The reaction gave a mixture of Z,E,Z and E,E,E isomers (predominantly Z,E,Z), from which the Z,E,Z isomer (I) was crystallized from dichloromethane by slow evaporation at room temperature in the dark. 1H NMR (CDCl3, 300 MHz): δ 7.95–7.99 (2H, m, arom.), 7.80–7.90 (4H, m, arom.), 7.43–7.55 (8H, m, arom.), 6.95 (2H, d, J = 11.1 Hz, triene), 6.72 (2H, dd, J = 7.7, 3.0 Hz, triene), 6.47 (2H, ddd, J = 11.0, 7.8, 3.2 Hz, triene).
All non-hydrogen atoms were refined anisotropically and hydrogen atoms were located by geometric considerations and refined as riding on their carrier atoms [ C—H = 0.94 Å, Ueq = 1.2 Uiso(C) ].
Data collection: SMART (Bruker, 2001); cell
SAINT (Bruker, 2001); data reduction: SAINT (Bruker, 2001); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).C26H20 | F(000) = 352 |
Mr = 332.42 | Dx = 1.244 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 1467 reflections |
a = 5.0071 (8) Å | θ = 2.6–27.1° |
b = 11.0709 (17) Å | µ = 0.07 mm−1 |
c = 16.110 (3) Å | T = 203 K |
β = 96.535 (3)° | Rectangular, pale yellow |
V = 887.2 (3) Å3 | 0.30 × 0.10 × 0.05 mm |
Z = 2 |
Bruker SMART CCD area-detector diffractometer | 2023 independent reflections |
Radiation source: rotating unit | 1366 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.027 |
Detector resolution: 8.366 pixels mm-1 | θmax = 28.3°, θmin = 2.2° |
ϕ and ω scans | h = −6→6 |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | k = −6→14 |
Tmin = 0.910, Tmax = 0.997 | l = −21→20 |
5367 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.043 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.114 | H-atom parameters constrained |
S = 1.01 | w = 1/[σ2(Fo2) + (0.0527P)2 + 0.1208P] where P = (Fo2 + 2Fc2)/3 |
2023 reflections | (Δ/σ)max = 0.001 |
118 parameters | Δρmax = 0.16 e Å−3 |
0 restraints | Δρmin = −0.16 e Å−3 |
C26H20 | V = 887.2 (3) Å3 |
Mr = 332.42 | Z = 2 |
Monoclinic, P21/n | Mo Kα radiation |
a = 5.0071 (8) Å | µ = 0.07 mm−1 |
b = 11.0709 (17) Å | T = 203 K |
c = 16.110 (3) Å | 0.30 × 0.10 × 0.05 mm |
β = 96.535 (3)° |
Bruker SMART CCD area-detector diffractometer | 2023 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 1366 reflections with I > 2σ(I) |
Tmin = 0.910, Tmax = 0.997 | Rint = 0.027 |
5367 measured reflections |
R[F2 > 2σ(F2)] = 0.043 | 0 restraints |
wR(F2) = 0.114 | H-atom parameters constrained |
S = 1.01 | Δρmax = 0.16 e Å−3 |
2023 reflections | Δρmin = −0.16 e Å−3 |
118 parameters |
Experimental. Sheldrick, G. M. (1996). SADABS, program for scaling and correction of area detector data. University of Göttingen, Germany. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.0718 (2) | 0.18611 (12) | 0.28101 (8) | 0.0349 (3) | |
C2 | 0.2135 (3) | 0.10461 (14) | 0.33764 (9) | 0.0425 (4) | |
H2 | 0.3383 | 0.0511 | 0.3183 | 0.051* | |
C3 | 0.1719 (3) | 0.10250 (15) | 0.42018 (9) | 0.0506 (4) | |
H3 | 0.2711 | 0.0489 | 0.4570 | 0.061* | |
C4 | −0.0171 (3) | 0.17947 (16) | 0.45017 (9) | 0.0536 (4) | |
H4 | −0.0446 | 0.1773 | 0.5069 | 0.064* | |
C5 | −0.1600 (3) | 0.25694 (15) | 0.39761 (9) | 0.0501 (4) | |
H5 | −0.2894 | 0.3068 | 0.4182 | 0.060* | |
C6 | −0.1188 (3) | 0.26465 (13) | 0.31206 (8) | 0.0399 (3) | |
C7 | −0.2601 (3) | 0.34839 (14) | 0.25750 (10) | 0.0476 (4) | |
H7 | −0.3870 | 0.4002 | 0.2776 | 0.057* | |
C8 | −0.2140 (3) | 0.35465 (14) | 0.17611 (10) | 0.0482 (4) | |
H8 | −0.3063 | 0.4120 | 0.1406 | 0.058* | |
C9 | −0.0295 (3) | 0.27621 (13) | 0.14452 (9) | 0.0428 (4) | |
H9 | −0.0016 | 0.2818 | 0.0879 | 0.051* | |
C10 | 0.1111 (3) | 0.19160 (13) | 0.19424 (8) | 0.0369 (3) | |
C11 | 0.3027 (3) | 0.10910 (13) | 0.16049 (8) | 0.0411 (3) | |
H11 | 0.4733 | 0.1020 | 0.1911 | 0.049* | |
C12 | 0.2587 (3) | 0.04314 (13) | 0.09057 (8) | 0.0407 (3) | |
H12 | 0.4052 | −0.0023 | 0.0761 | 0.049* | |
C13 | 0.0132 (3) | 0.03363 (13) | 0.03492 (8) | 0.0386 (3) | |
H13 | −0.1374 | 0.0771 | 0.0483 | 0.046* |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0329 (6) | 0.0326 (7) | 0.0385 (7) | −0.0064 (6) | 0.0006 (5) | −0.0059 (6) |
C2 | 0.0416 (7) | 0.0409 (8) | 0.0441 (8) | −0.0017 (7) | 0.0005 (6) | −0.0029 (7) |
C3 | 0.0553 (9) | 0.0523 (10) | 0.0422 (8) | −0.0077 (8) | −0.0030 (7) | 0.0048 (7) |
C4 | 0.0622 (10) | 0.0612 (11) | 0.0381 (8) | −0.0137 (9) | 0.0089 (7) | −0.0070 (8) |
C5 | 0.0512 (9) | 0.0513 (10) | 0.0492 (9) | −0.0072 (8) | 0.0121 (7) | −0.0165 (8) |
C6 | 0.0383 (7) | 0.0377 (8) | 0.0435 (8) | −0.0067 (6) | 0.0034 (6) | −0.0116 (6) |
C7 | 0.0439 (8) | 0.0402 (8) | 0.0579 (9) | 0.0055 (7) | 0.0028 (7) | −0.0130 (7) |
C8 | 0.0502 (8) | 0.0384 (8) | 0.0533 (9) | 0.0053 (7) | −0.0059 (7) | −0.0020 (7) |
C9 | 0.0464 (8) | 0.0419 (8) | 0.0394 (7) | −0.0024 (7) | 0.0017 (6) | −0.0013 (6) |
C10 | 0.0346 (7) | 0.0366 (8) | 0.0392 (7) | −0.0057 (6) | 0.0023 (5) | −0.0051 (6) |
C11 | 0.0360 (7) | 0.0463 (9) | 0.0409 (7) | −0.0001 (6) | 0.0042 (6) | −0.0021 (7) |
C12 | 0.0383 (7) | 0.0434 (8) | 0.0419 (7) | 0.0007 (6) | 0.0110 (6) | −0.0015 (7) |
C13 | 0.0388 (7) | 0.0384 (8) | 0.0404 (7) | −0.0014 (6) | 0.0127 (6) | 0.0004 (6) |
C1—C2 | 1.4153 (19) | C7—H7 | 0.9400 |
C1—C6 | 1.4232 (19) | C8—C9 | 1.405 (2) |
C1—C10 | 1.4350 (18) | C8—H8 | 0.9400 |
C2—C3 | 1.369 (2) | C9—C10 | 1.3736 (19) |
C2—H2 | 0.9400 | C9—H9 | 0.9400 |
C3—C4 | 1.400 (2) | C10—C11 | 1.4727 (19) |
C3—H3 | 0.9400 | C11—C12 | 1.3395 (19) |
C4—C5 | 1.351 (2) | C11—H11 | 0.9400 |
C4—H4 | 0.9400 | C12—C13 | 1.4404 (18) |
C5—C6 | 1.419 (2) | C12—H12 | 0.9400 |
C5—H5 | 0.9400 | C13—C13i | 1.343 (3) |
C6—C7 | 1.411 (2) | C13—H13 | 0.9400 |
C7—C8 | 1.359 (2) | ||
C2—C1—C6 | 118.04 (13) | C6—C7—H7 | 119.8 |
C2—C1—C10 | 122.72 (13) | C7—C8—C9 | 120.61 (14) |
C6—C1—C10 | 119.24 (12) | C7—C8—H8 | 119.7 |
C3—C2—C1 | 121.08 (14) | C9—C8—H8 | 119.7 |
C3—C2—H2 | 119.5 | C10—C9—C8 | 121.66 (13) |
C1—C2—H2 | 119.5 | C10—C9—H9 | 119.2 |
C2—C3—C4 | 120.56 (15) | C8—C9—H9 | 119.2 |
C2—C3—H3 | 119.7 | C9—C10—C1 | 118.61 (13) |
C4—C3—H3 | 119.7 | C9—C10—C11 | 121.32 (13) |
C5—C4—C3 | 120.03 (14) | C1—C10—C11 | 120.06 (12) |
C5—C4—H4 | 120.0 | C12—C11—C10 | 126.65 (12) |
C3—C4—H4 | 120.0 | C12—C11—H11 | 116.7 |
C4—C5—C6 | 121.45 (15) | C10—C11—H11 | 116.7 |
C4—C5—H5 | 119.3 | C11—C12—C13 | 127.61 (13) |
C6—C5—H5 | 119.3 | C11—C12—H12 | 116.2 |
C7—C6—C5 | 121.78 (14) | C13—C12—H12 | 116.2 |
C7—C6—C1 | 119.41 (13) | C13i—C13—C12 | 123.89 (16) |
C5—C6—C1 | 118.81 (14) | C13i—C13—H13 | 118.1 |
C8—C7—C6 | 120.41 (14) | C12—C13—H13 | 118.1 |
C8—C7—H7 | 119.8 | ||
C6—C1—C2—C3 | −1.0 (2) | C6—C7—C8—C9 | 1.4 (2) |
C10—C1—C2—C3 | 179.57 (13) | C7—C8—C9—C10 | −0.4 (2) |
C1—C2—C3—C4 | 1.4 (2) | C8—C9—C10—C1 | −1.6 (2) |
C2—C3—C4—C5 | −0.1 (2) | C8—C9—C10—C11 | 179.55 (13) |
C3—C4—C5—C6 | −1.5 (2) | C2—C1—C10—C9 | −178.01 (13) |
C4—C5—C6—C7 | −177.64 (14) | C6—C1—C10—C9 | 2.54 (18) |
C4—C5—C6—C1 | 1.9 (2) | C2—C1—C10—C11 | 0.90 (19) |
C2—C1—C6—C7 | 178.92 (12) | C6—C1—C10—C11 | −178.55 (12) |
C10—C1—C6—C7 | −1.60 (19) | C9—C10—C11—C12 | −48.6 (2) |
C2—C1—C6—C5 | −0.66 (18) | C1—C10—C11—C12 | 132.53 (15) |
C10—C1—C6—C5 | 178.82 (12) | C10—C11—C12—C13 | −3.0 (2) |
C5—C6—C7—C8 | 179.19 (14) | C11—C12—C13—C13i | 179.04 (17) |
C1—C6—C7—C8 | −0.4 (2) |
Symmetry code: (i) −x, −y, −z. |
Experimental details
Crystal data | |
Chemical formula | C26H20 |
Mr | 332.42 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 203 |
a, b, c (Å) | 5.0071 (8), 11.0709 (17), 16.110 (3) |
β (°) | 96.535 (3) |
V (Å3) | 887.2 (3) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.07 |
Crystal size (mm) | 0.30 × 0.10 × 0.05 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.910, 0.997 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 5367, 2023, 1366 |
Rint | 0.027 |
(sin θ/λ)max (Å−1) | 0.667 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.043, 0.114, 1.01 |
No. of reflections | 2023 |
No. of parameters | 118 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.16, −0.16 |
Computer programs: SMART (Bruker, 2001), SAINT (Bruker, 2001), SHELXTL (Sheldrick, 2008).
References
Aldoshin, S. M., Alfimov, M. V., Atovmyan, L. O., Kaminsky, V. F., Razumov, V. F. & Rachinsky, A. G. (1984). Mol. Cryst. Liq. Cryst. 108, 1–17. CrossRef CAS Web of Science Google Scholar
Bruker (2001). SMART and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Geskin, V. M., Lambert, C. & Brédas, J.-L. (2003). J. Am. Chem. Soc. 125, 15651–15658. Web of Science CrossRef PubMed CAS Google Scholar
Rumi, M., Ehrlich, J. E., Heikal, A. A., Perry, J. W., Barlow, S., Hu, Z., McCord-Maughon, D., Parker, T. C., Röckel, H., Thayumanavan, S., Marder, S. R., Beljonne, D. & Brédas, J.-L. (2000). J. Am. Chem. Soc. 122, 9500–9510. Web of Science CrossRef CAS Google Scholar
Sheldrick, G. M. (1996). SADABS. University of Göttingen, Germany. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Sonoda, Y., Goto, M., Tsuzuki, S. & Tamaoki, N. (2006). J. Phys. Chem. A, 110, 13379–13387. Web of Science CSD CrossRef PubMed CAS Google Scholar
Sonoda, Y., Goto, M., Tsuzuki, S. & Tamaoki, N. (2007). J. Phys. Chem. A, 111, 13441–13451. Web of Science CSD CrossRef PubMed CAS Google Scholar
Sonoda, Y., Kawanishi, Y., Tsuzuki, S. & Goto, M. (2005). J. Org. Chem. 70, 9755–9763. Web of Science CSD CrossRef PubMed CAS Google Scholar
Sonoda, Y., Tsuzuki, S., Tamaoki, N. & Goto, M. (2007). Acta Cryst. C63, o196–o200. Web of Science CSD CrossRef IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
α,ω-Diarylpolyenes are known as fluorescent molecules in solution, and are also attractive because of their potential use as non-linear optical materials (Rumi et al., 2000; Geskin et al., 2003). During an ongoing study on the relationship between the crystal structure and the photophysical properties of 1,6-diarylhexa-1,3,5-trienes (Sonoda et al., 2006; Sonoda, Goto et al., 2007), we obtained the title compound (I), whose structure we report here.
In the present compound, the averaged value of the C—C single bond length in the hexatriene chain is 1.457 Å, that of the C=C double bond length is 1.341 Å, and the resulting bond-length alternation (δr, the difference between the single and double bond lengths) is 0.116 Å. The title compound lies about an inversion centre.
The naphthalene ring and the hexatriene chain are approximately planar, with the maximum deviations of 0.0143 and 0.0042 Å from the least-squares planes, respectively (Fig. 1). The dihedral angle between the ring and the chain is 49.20 (4)°. Thus, the steric hindrance between C9—H and C13—H is minimized by the twisting around the C10—C11 single bond. C—C—C internal bond angles in the hexatriene chain are all somewhat wider than 120°, which also minimizes the steric hindrance.
The structure of (I) can be compared with those of (Z,E,Z)-1,6-diphenylhexa-1,3,5-triene 4,4'-dicarboxylic acid dialkyl esters (Sonoda et al., 2005). In the case of the dimethyl ester, for example, δr is 0.111 Å and other geometrical parameters for the triene chain including C—C—C bond angles are all comparable with the values in (I). Also in this compound, the benzene ring and the triene chain are nearly planar for conjugation. The torsion angle of the single bond between the ring and the chain is 41.0 (2)°, significantly smaller than the C9—C10—C11—C12 angle in (I). This is probably due to the additional steric hindrance between C2—H and C11—H in (I).
For another related structure of (Z)-1,2-di(1-naphthyl)ethylene, the twisting not only around the naphthalene-ethylene single bond but also around the C=C double bond minimize the large steric hindrance between the two hydrogen atoms at the 2-position of the naphthalene ring (Aldoshin et al., 1984). Different from the high planarity of the hexatriene unit in (I), the C—C═C—C torsion angle in this compound is 14.6°. While, the torsion angle of 44.1° about the naphthalene-ethylene single bond is similar to or even slightly smaller than the corresponding angle in (I).
In the crystal structure of (I), there are some C—H···π contacts (Fig. 2). The dihedral angle between the two naphthalene rings of the neighboring molecules is 85.71 (4)°.