organic compounds
1,3-Bis(4-tert-butylbenzyl)-4,5-dihydroimidazolium chloride monohydrate
aDepartment of Natural Sciences, Fayetteville State University, Fayetteville, NC 28301, USA, b Department of Chemistry, Faculty of Pharmacy, Mersin University, Mersin, TR 33169, Turkey, cDepartment of Chemistry, Clemson University, Clemson, SC 29634, USA, dDepartment of Chemistry, Faculty of Science and Arts, nönü University, Malatya, TR 44280, Turkey, and eDepartment of Chemistry, Faculty of Science, Ege University, Bornova-zmir, TR 35100, Turkey
*Correspondence e-mail: hakan.arslan.acad@gmail.com
In the title compound, C25H35N2+·Cl−·H2O, the imidazolidine ring adopts a twisted conformation, with a pseudo-twofold axis passing through the N—C—N carbon and the opposite C—C bond. The N—C—N fragment of the imidazolidine ring shows some degree of both double- and single-bond character due to partial electron delocalization. One of the tert-butyl groups is disordered over two conformations with occupancies of 0.714 (8) and 0.286 (8). In the crystal, O—H⋯Cl and C—H⋯O hydrogen bonds help to establish the packing.
Related literature
For synthesis, see: Yaşar et al. (2008); Özdemir et al. (2004a, 2004b). For general background, see: Herrmann et al. (1998); Glorius (2007); Nolan (2006). For related compounds, see: Arslan et al. (2009a,b) and references therein. For bond-length data, see: Allen et al. (1987). For puckering and asymmetry parameters, see: Cremer & Pople (1975); Nardelli (1983).
Experimental
Crystal data
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Refinement
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Data collection: CrystalClear (Rigaku/MSC, 2006); cell CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536809000452/hg2460sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809000452/hg2460Isup2.hkl
The 4-tert-buthylbenzaldehyde (20 mmol) and the ethylenediamine (10 mmol) were stirred overnight in methanol. The diimine was collected as a white solid, filtrated and recrystallized in an alcohol/ether mixture. The diimine (10 mmol) was subsequently reduced by NaBH4 (30 mmol) in CH3OH (30 ml). The solution was then treated with 1 N HCl, and the organic phase was extracted with CH2Cl2 (3x30mL). After drying over MgSO4 and evaporation, the diamine was isolated as a solid. The diamine was then treated in a large excess of triethylorthoformate (50 ml) in the presence of 10 mmol of NH4Cl at 110 °C in a distillation apparatus until all of the ethanol was removed. Upon cooling to room temperature a colourless solid precipitated, which was collected by filtration and dried under vacuum. The crude product was recrystallized from absolute ethanol to give colourless needles and the solid was washed with diethyl ether (2x10 ml) and dried under vacuum. Yield: 3.53 g; 94%. M.p.: 294–295 °C; ν(CN) : 1669 cm-1. 1H NMR (δ, CDCl3): 1.24 (s, 18H, CH2C6H4(CCH3)3-4), 3.73 (s, 4H, NCH2CH2N), 4.80 (s, 4H, CH2C6H4(CCH3)3-4), 7.19–7.32 (m, 8H, CH2C6H4(CCH3)3-4), 10.20 (s, 1H, NCHN). 13C NMR (δ, CDCl3): 31.4 (CH2C6H4(CCH3)3-4), 34.9 (CH2C6H4(CCH3)3-4), 52.2 (CH2C6H4(CCH3)3-4), 126.3, 128.9, 129.8 and 152.3 (CH2C6H4(CCH3)3-4), 158.9 (NCHN). Anal. Calcd. for C25H35N2Cl: C,75.25; H, 8.84; N, 7.02%. Found: C, 75.20; H, 8.83; N, 7.0%.
All H atoms attached to carbons were geometrically fixed and allowed to ride on the corresponding non-H atom with C—H = 0.96 Å, and Uiso(H) = 1.5Ueq(C) of the attached C atom for methyl H atoms and 1.2Ueq(C) for other H atoms. The water H atoms were located from a Fourier map and their distances were constrained to 0.83 Å and the Uiso(H) = 1.5Ueq(O). One of the t-butyl groups was disordered. Two components were refined with the major component having an occupancy of 0.714. Each component had constraints on the C11 - methyl distances (1.535 (50) Å) and the methyl-methyl distances (2.495 (50) Å). These values were obtained from the other t-butyl group in the structure.
Data collection: CrystalClear (Rigaku/MSC, 2006); cell
CrystalClear (Rigaku/MSC, 2006); data reduction: CrystalClear (Rigaku/MSC, 2006); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).C25H35N2+·Cl−·H2O | F(000) = 904 |
Mr = 417.02 | Dx = 1.132 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 5990 reflections |
a = 18.205 (4) Å | θ = 2.3–26.7° |
b = 10.148 (2) Å | µ = 0.17 mm−1 |
c = 13.452 (3) Å | T = 153 K |
β = 100.01 (3)° | Plate, colorless |
V = 2447.3 (9) Å3 | 0.43 × 0.17 × 0.05 mm |
Z = 4 |
Rigaku AFC 8S Mercury CCD diffractometer | 4297 independent reflections |
Radiation source: Sealed Tube | 2886 reflections with I > 2σ(I) |
Graphite Monochromator monochromator | Rint = 0.072 |
Detector resolution: 14.6306 pixels mm-1 | θmax = 25.0°, θmin = 2.3° |
ω scans | h = −15→21 |
Absorption correction: multi-scan (Jacobson, 1998) | k = −12→12 |
Tmin = 0.929, Tmax = 0.991 | l = −16→16 |
17800 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.069 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.207 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.03 | w = 1/[σ2(Fo2) + (0.0868P)2 + 3.6749P] where P = (Fo2 + 2Fc2)/3 |
4297 reflections | (Δ/σ)max < 0.001 |
299 parameters | Δρmax = 0.28 e Å−3 |
50 restraints | Δρmin = −0.26 e Å−3 |
C25H35N2+·Cl−·H2O | V = 2447.3 (9) Å3 |
Mr = 417.02 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 18.205 (4) Å | µ = 0.17 mm−1 |
b = 10.148 (2) Å | T = 153 K |
c = 13.452 (3) Å | 0.43 × 0.17 × 0.05 mm |
β = 100.01 (3)° |
Rigaku AFC 8S Mercury CCD diffractometer | 4297 independent reflections |
Absorption correction: multi-scan (Jacobson, 1998) | 2886 reflections with I > 2σ(I) |
Tmin = 0.929, Tmax = 0.991 | Rint = 0.072 |
17800 measured reflections |
R[F2 > 2σ(F2)] = 0.069 | 50 restraints |
wR(F2) = 0.207 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.03 | Δρmax = 0.28 e Å−3 |
4297 reflections | Δρmin = −0.26 e Å−3 |
299 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Cl1 | 0.55770 (5) | 0.59372 (8) | 0.69855 (6) | 0.0407 (2) | |
C1 | 0.44642 (19) | 0.3585 (3) | 0.5584 (2) | 0.0329 (7) | |
H1 | 0.4673 | 0.4424 | 0.5810 | 0.040* | |
C2 | 0.3626 (2) | 0.2034 (3) | 0.4864 (3) | 0.0408 (8) | |
H2A | 0.3513 | 0.1950 | 0.4143 | 0.049* | |
H2B | 0.3225 | 0.1667 | 0.5152 | 0.049* | |
C3 | 0.43716 (19) | 0.1369 (3) | 0.5294 (2) | 0.0348 (7) | |
H3A | 0.4319 | 0.0779 | 0.5835 | 0.042* | |
H3B | 0.4564 | 0.0890 | 0.4781 | 0.042* | |
C4 | 0.56104 (19) | 0.2349 (3) | 0.6223 (2) | 0.0358 (8) | |
H4A | 0.5607 | 0.1721 | 0.6756 | 0.043* | |
H4B | 0.5765 | 0.3181 | 0.6530 | 0.043* | |
C5 | 0.61762 (19) | 0.1916 (3) | 0.5590 (2) | 0.0328 (7) | |
C6 | 0.61032 (19) | 0.2201 (3) | 0.4561 (2) | 0.0362 (8) | |
H6 | 0.5660 | 0.2627 | 0.4218 | 0.043* | |
C7 | 0.6664 (2) | 0.1874 (4) | 0.4035 (3) | 0.0402 (8) | |
H7 | 0.6597 | 0.2071 | 0.3327 | 0.048* | |
C8 | 0.73238 (19) | 0.1271 (3) | 0.4493 (3) | 0.0360 (8) | |
C9 | 0.7385 (2) | 0.0989 (4) | 0.5517 (3) | 0.0422 (8) | |
H9 | 0.7831 | 0.0576 | 0.5863 | 0.051* | |
C10 | 0.6820 (2) | 0.1288 (4) | 0.6052 (3) | 0.0433 (9) | |
H10 | 0.6877 | 0.1055 | 0.6753 | 0.052* | |
C11 | 0.7948 (2) | 0.0960 (4) | 0.3890 (3) | 0.0421 (8) | |
C12 | 0.7640 (4) | 0.0329 (9) | 0.2899 (5) | 0.073 (2) | 0.714 (8) |
H12A | 0.7393 | −0.0478 | 0.3016 | 0.109* | 0.714 (8) |
H12B | 0.8039 | 0.0146 | 0.2538 | 0.109* | 0.714 (8) |
H12C | 0.7289 | 0.0916 | 0.2508 | 0.109* | 0.714 (8) |
C12' | 0.7917 (13) | −0.0488 (16) | 0.367 (2) | 0.109 (9) | 0.286 (8) |
H12D | 0.7449 | −0.0699 | 0.3251 | 0.164* | 0.286 (8) |
H12E | 0.7963 | −0.0969 | 0.4293 | 0.164* | 0.286 (8) |
H12F | 0.8319 | −0.0724 | 0.3328 | 0.164* | 0.286 (8) |
C13 | 0.8549 (4) | 0.0036 (8) | 0.4466 (5) | 0.072 (2) | 0.714 (8) |
H13A | 0.8746 | 0.0411 | 0.5112 | 0.108* | 0.714 (8) |
H13B | 0.8944 | −0.0073 | 0.4084 | 0.108* | 0.714 (8) |
H13C | 0.8331 | −0.0807 | 0.4559 | 0.108* | 0.714 (8) |
C13' | 0.8687 (10) | 0.148 (3) | 0.4447 (14) | 0.109 (10) | 0.286 (8) |
H13D | 0.8605 | 0.1968 | 0.5031 | 0.164* | 0.286 (8) |
H13E | 0.8905 | 0.2053 | 0.4008 | 0.164* | 0.286 (8) |
H13F | 0.9017 | 0.0759 | 0.4654 | 0.164* | 0.286 (8) |
C14 | 0.8337 (4) | 0.2256 (7) | 0.3712 (7) | 0.072 (2) | 0.714 (8) |
H14A | 0.8539 | 0.2650 | 0.4350 | 0.108* | 0.714 (8) |
H14B | 0.7982 | 0.2847 | 0.3332 | 0.108* | 0.714 (8) |
H14C | 0.8732 | 0.2084 | 0.3341 | 0.108* | 0.714 (8) |
C14' | 0.7827 (11) | 0.1702 (19) | 0.2853 (13) | 0.080 (6) | 0.286 (8) |
H14D | 0.7322 | 0.1582 | 0.2516 | 0.121* | 0.286 (8) |
H14E | 0.8162 | 0.1355 | 0.2440 | 0.121* | 0.286 (8) |
H14F | 0.7923 | 0.2625 | 0.2967 | 0.121* | 0.286 (8) |
C15 | 0.3209 (2) | 0.4448 (4) | 0.4915 (3) | 0.0431 (9) | |
H15A | 0.3039 | 0.4452 | 0.4198 | 0.052* | |
H15B | 0.3433 | 0.5288 | 0.5102 | 0.052* | |
C16 | 0.2551 (2) | 0.4253 (3) | 0.5442 (3) | 0.0377 (8) | |
C17 | 0.2655 (2) | 0.4019 (5) | 0.6469 (3) | 0.0528 (10) | |
H17 | 0.3153 | 0.3980 | 0.6849 | 0.063* | |
C18 | 0.2052 (2) | 0.3841 (5) | 0.6957 (3) | 0.0532 (11) | |
H18 | 0.2142 | 0.3690 | 0.7673 | 0.064* | |
C19 | 0.1325 (2) | 0.3875 (3) | 0.6443 (3) | 0.0382 (8) | |
C20 | 0.1231 (2) | 0.4119 (5) | 0.5426 (3) | 0.0550 (11) | |
H20 | 0.0734 | 0.4161 | 0.5043 | 0.066* | |
C21 | 0.1835 (2) | 0.4307 (5) | 0.4932 (3) | 0.0549 (11) | |
H21 | 0.1746 | 0.4478 | 0.4219 | 0.066* | |
C22 | 0.0654 (2) | 0.3722 (4) | 0.6988 (3) | 0.0459 (9) | |
C23 | 0.0852 (3) | 0.2921 (5) | 0.7956 (3) | 0.0615 (11) | |
H23A | 0.1047 | 0.2080 | 0.7805 | 0.092* | |
H23B | 0.0414 | 0.2794 | 0.8251 | 0.092* | |
H23C | 0.1221 | 0.3386 | 0.8424 | 0.092* | |
C24 | 0.0407 (3) | 0.5107 (5) | 0.7246 (4) | 0.0754 (15) | |
H24A | −0.0034 | 0.5045 | 0.7543 | 0.113* | |
H24B | 0.0303 | 0.5626 | 0.6641 | 0.113* | |
H24C | 0.0798 | 0.5517 | 0.7714 | 0.113* | |
C25 | 0.0003 (2) | 0.3024 (5) | 0.6312 (4) | 0.0649 (12) | |
H25A | 0.0168 | 0.2187 | 0.6103 | 0.097* | |
H25B | −0.0170 | 0.3557 | 0.5729 | 0.097* | |
H25C | −0.0397 | 0.2892 | 0.6684 | 0.097* | |
N1 | 0.48540 (15) | 0.2483 (3) | 0.5661 (2) | 0.0333 (6) | |
N2 | 0.37630 (16) | 0.3421 (3) | 0.5169 (2) | 0.0353 (6) | |
O1 | 0.55870 (15) | 0.5901 (2) | 0.2126 (2) | 0.0442 (6) | |
H1A | 0.525 (2) | 0.546 (4) | 0.235 (3) | 0.066* | |
H1B | 0.556 (3) | 0.6725 (19) | 0.209 (3) | 0.066* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1 | 0.0513 (5) | 0.0360 (4) | 0.0371 (4) | −0.0030 (4) | 0.0140 (4) | −0.0004 (3) |
C1 | 0.0419 (18) | 0.0288 (16) | 0.0323 (16) | −0.0043 (14) | 0.0180 (14) | −0.0020 (13) |
C2 | 0.0445 (19) | 0.0341 (18) | 0.047 (2) | −0.0023 (15) | 0.0157 (16) | −0.0088 (15) |
C3 | 0.0415 (19) | 0.0288 (16) | 0.0351 (17) | −0.0036 (14) | 0.0090 (15) | −0.0034 (13) |
C4 | 0.0428 (18) | 0.0371 (18) | 0.0269 (16) | −0.0023 (14) | 0.0043 (14) | −0.0020 (13) |
C5 | 0.0401 (18) | 0.0248 (15) | 0.0344 (17) | −0.0064 (13) | 0.0090 (14) | −0.0005 (12) |
C6 | 0.0362 (17) | 0.0407 (18) | 0.0309 (17) | 0.0022 (14) | 0.0040 (14) | 0.0005 (14) |
C7 | 0.046 (2) | 0.046 (2) | 0.0277 (17) | −0.0003 (16) | 0.0047 (15) | −0.0005 (14) |
C8 | 0.0364 (18) | 0.0312 (17) | 0.0402 (18) | −0.0057 (14) | 0.0059 (15) | −0.0048 (13) |
C9 | 0.043 (2) | 0.047 (2) | 0.0370 (19) | 0.0046 (16) | 0.0062 (15) | 0.0041 (15) |
C10 | 0.048 (2) | 0.055 (2) | 0.0267 (17) | 0.0061 (17) | 0.0065 (15) | 0.0049 (15) |
C11 | 0.0412 (19) | 0.046 (2) | 0.042 (2) | 0.0009 (16) | 0.0138 (16) | −0.0027 (16) |
C12 | 0.063 (4) | 0.099 (6) | 0.059 (4) | 0.001 (4) | 0.019 (3) | −0.028 (4) |
C12' | 0.127 (18) | 0.048 (10) | 0.19 (2) | −0.011 (11) | 0.117 (18) | −0.025 (12) |
C13 | 0.059 (4) | 0.091 (5) | 0.073 (5) | 0.039 (4) | 0.030 (3) | 0.012 (4) |
C13' | 0.047 (10) | 0.22 (3) | 0.065 (12) | −0.012 (14) | 0.020 (9) | −0.004 (16) |
C14 | 0.059 (4) | 0.063 (4) | 0.105 (6) | −0.009 (3) | 0.045 (4) | 0.004 (4) |
C14' | 0.099 (14) | 0.085 (13) | 0.071 (11) | 0.030 (11) | 0.054 (10) | 0.024 (9) |
C15 | 0.042 (2) | 0.0412 (19) | 0.047 (2) | 0.0041 (15) | 0.0108 (17) | 0.0045 (16) |
C16 | 0.0409 (19) | 0.0320 (17) | 0.0409 (19) | 0.0025 (14) | 0.0090 (15) | −0.0021 (14) |
C17 | 0.0345 (19) | 0.084 (3) | 0.040 (2) | 0.0040 (19) | 0.0053 (16) | −0.0035 (19) |
C18 | 0.040 (2) | 0.084 (3) | 0.0345 (19) | 0.005 (2) | 0.0060 (16) | −0.0025 (19) |
C19 | 0.0384 (19) | 0.0323 (17) | 0.0443 (19) | 0.0036 (14) | 0.0082 (15) | −0.0051 (14) |
C20 | 0.038 (2) | 0.076 (3) | 0.048 (2) | 0.004 (2) | 0.0007 (17) | 0.011 (2) |
C21 | 0.050 (2) | 0.074 (3) | 0.040 (2) | 0.004 (2) | 0.0046 (18) | 0.0118 (19) |
C22 | 0.041 (2) | 0.041 (2) | 0.058 (2) | 0.0041 (16) | 0.0158 (18) | 0.0008 (17) |
C23 | 0.062 (3) | 0.066 (3) | 0.062 (3) | −0.009 (2) | 0.023 (2) | 0.007 (2) |
C24 | 0.080 (3) | 0.052 (3) | 0.109 (4) | 0.010 (2) | 0.058 (3) | −0.001 (3) |
C25 | 0.045 (2) | 0.069 (3) | 0.079 (3) | −0.010 (2) | 0.007 (2) | 0.012 (2) |
N1 | 0.0390 (15) | 0.0285 (13) | 0.0340 (14) | −0.0035 (11) | 0.0107 (12) | −0.0051 (11) |
N2 | 0.0404 (16) | 0.0305 (14) | 0.0373 (15) | −0.0010 (12) | 0.0130 (12) | −0.0010 (11) |
O1 | 0.0508 (15) | 0.0368 (13) | 0.0481 (15) | −0.0018 (12) | 0.0171 (12) | 0.0024 (11) |
C1—N2 | 1.312 (4) | C13—H13C | 0.9600 |
C1—N1 | 1.319 (4) | C13'—H13D | 0.9600 |
C1—H1 | 0.9600 | C13'—H13E | 0.9600 |
C2—N2 | 1.475 (4) | C13'—H13F | 0.9600 |
C2—C3 | 1.536 (5) | C14—H14A | 0.9600 |
C2—H2A | 0.9600 | C14—H14B | 0.9600 |
C2—H2B | 0.9600 | C14—H14C | 0.9600 |
C3—N1 | 1.463 (4) | C14'—H14D | 0.9600 |
C3—H3A | 0.9600 | C14'—H14E | 0.9600 |
C3—H3B | 0.9600 | C14'—H14F | 0.9600 |
C4—N1 | 1.458 (4) | C15—N2 | 1.449 (4) |
C4—C5 | 1.511 (5) | C15—C16 | 1.506 (5) |
C4—H4A | 0.9600 | C15—H15A | 0.9600 |
C4—H4B | 0.9600 | C15—H15B | 0.9600 |
C5—C10 | 1.383 (5) | C16—C21 | 1.365 (5) |
C5—C6 | 1.398 (5) | C16—C17 | 1.381 (5) |
C6—C7 | 1.380 (5) | C17—C18 | 1.386 (6) |
C6—H6 | 0.9600 | C17—H17 | 0.9600 |
C7—C8 | 1.392 (5) | C18—C19 | 1.383 (5) |
C7—H7 | 0.9600 | C18—H18 | 0.9600 |
C8—C9 | 1.392 (5) | C19—C20 | 1.372 (5) |
C8—C11 | 1.539 (5) | C19—C22 | 1.538 (5) |
C9—C10 | 1.387 (5) | C20—C21 | 1.393 (6) |
C9—H9 | 0.9600 | C20—H20 | 0.9600 |
C10—H10 | 0.9600 | C21—H21 | 0.9600 |
C11—C12 | 1.497 (7) | C22—C23 | 1.525 (6) |
C11—C12' | 1.498 (16) | C22—C24 | 1.534 (6) |
C11—C13' | 1.517 (18) | C22—C25 | 1.535 (6) |
C11—C14 | 1.532 (7) | C23—H23A | 0.9599 |
C11—C13 | 1.544 (7) | C23—H23B | 0.9599 |
C11—C14' | 1.567 (15) | C23—H23C | 0.9599 |
C12—H12A | 0.9600 | C24—H24A | 0.9599 |
C12—H12B | 0.9600 | C24—H24B | 0.9599 |
C12—H12C | 0.9600 | C24—H24C | 0.9599 |
C12'—H12D | 0.9600 | C25—H25A | 0.9599 |
C12'—H12E | 0.9600 | C25—H25B | 0.9599 |
C12'—H12F | 0.9600 | C25—H25C | 0.9599 |
C13—H13A | 0.9600 | O1—H1A | 0.85 (3) |
C13—H13B | 0.9600 | O1—H1B | 0.839 (18) |
N2—C1—N1 | 113.4 (3) | H13D—C13'—H13E | 109.5 |
N2—C1—H1 | 123.3 | C11—C13'—H13F | 109.5 |
N1—C1—H1 | 123.3 | H13D—C13'—H13F | 109.5 |
N2—C2—C3 | 102.7 (3) | H13E—C13'—H13F | 109.5 |
N2—C2—H2A | 111.2 | C11—C14—H14A | 109.5 |
C3—C2—H2A | 111.2 | C11—C14—H14B | 109.5 |
N2—C2—H2B | 111.2 | H14A—C14—H14B | 109.5 |
C3—C2—H2B | 111.2 | C11—C14—H14C | 109.5 |
H2A—C2—H2B | 109.1 | H14A—C14—H14C | 109.5 |
N1—C3—C2 | 103.1 (3) | H14B—C14—H14C | 109.5 |
N1—C3—H3A | 111.1 | C11—C14'—H14D | 109.5 |
C2—C3—H3A | 111.1 | C11—C14'—H14E | 109.5 |
N1—C3—H3B | 111.1 | H14D—C14'—H14E | 109.5 |
C2—C3—H3B | 111.1 | C11—C14'—H14F | 109.5 |
H3A—C3—H3B | 109.1 | H14D—C14'—H14F | 109.5 |
N1—C4—C5 | 114.2 (3) | H14E—C14'—H14F | 109.5 |
N1—C4—H4A | 108.7 | N2—C15—C16 | 111.9 (3) |
C5—C4—H4A | 108.7 | N2—C15—H15A | 109.2 |
N1—C4—H4B | 108.7 | C16—C15—H15A | 109.2 |
C5—C4—H4B | 108.7 | N2—C15—H15B | 109.2 |
H4A—C4—H4B | 107.6 | C16—C15—H15B | 109.2 |
C10—C5—C6 | 117.9 (3) | H15A—C15—H15B | 107.9 |
C10—C5—C4 | 119.2 (3) | C21—C16—C17 | 117.6 (4) |
C6—C5—C4 | 122.8 (3) | C21—C16—C15 | 121.7 (3) |
C7—C6—C5 | 120.4 (3) | C17—C16—C15 | 120.7 (3) |
C7—C6—H6 | 119.8 | C16—C17—C18 | 120.9 (4) |
C5—C6—H6 | 119.8 | C16—C17—H17 | 119.5 |
C6—C7—C8 | 122.5 (3) | C18—C17—H17 | 119.5 |
C6—C7—H7 | 118.8 | C19—C18—C17 | 121.9 (4) |
C8—C7—H7 | 118.8 | C19—C18—H18 | 119.1 |
C9—C8—C7 | 116.2 (3) | C17—C18—H18 | 119.1 |
C9—C8—C11 | 122.7 (3) | C20—C19—C18 | 116.5 (4) |
C7—C8—C11 | 121.1 (3) | C20—C19—C22 | 121.4 (3) |
C10—C9—C8 | 122.0 (3) | C18—C19—C22 | 122.0 (3) |
C10—C9—H9 | 119.0 | C19—C20—C21 | 121.9 (4) |
C8—C9—H9 | 119.0 | C19—C20—H20 | 119.1 |
C5—C10—C9 | 121.0 (3) | C21—C20—H20 | 119.1 |
C5—C10—H10 | 119.5 | C16—C21—C20 | 121.3 (4) |
C9—C10—H10 | 119.5 | C16—C21—H21 | 119.4 |
C12'—C11—C13' | 116.1 (15) | C20—C21—H21 | 119.4 |
C12—C11—C14 | 109.9 (5) | C23—C22—C24 | 109.3 (4) |
C12—C11—C8 | 111.1 (4) | C23—C22—C25 | 107.7 (3) |
C12'—C11—C8 | 107.4 (8) | C24—C22—C25 | 109.3 (4) |
C13'—C11—C8 | 109.9 (8) | C23—C22—C19 | 111.8 (3) |
C14—C11—C8 | 108.1 (4) | C24—C22—C19 | 107.7 (3) |
C12—C11—C13 | 108.1 (5) | C25—C22—C19 | 111.1 (3) |
C14—C11—C13 | 107.1 (5) | C22—C23—H23A | 109.5 |
C8—C11—C13 | 112.6 (4) | C22—C23—H23B | 109.5 |
C12'—C11—C14' | 107.6 (13) | H23A—C23—H23B | 109.5 |
C13'—C11—C14' | 104.3 (12) | C22—C23—H23C | 109.5 |
C8—C11—C14' | 111.6 (7) | H23A—C23—H23C | 109.5 |
C11—C12—H12A | 109.5 | H23B—C23—H23C | 109.5 |
C11—C12—H12B | 109.5 | C22—C24—H24A | 109.5 |
H12A—C12—H12B | 109.5 | C22—C24—H24B | 109.5 |
C11—C12—H12C | 109.5 | H24A—C24—H24B | 109.5 |
H12A—C12—H12C | 109.5 | C22—C24—H24C | 109.5 |
H12B—C12—H12C | 109.5 | H24A—C24—H24C | 109.5 |
C11—C12'—H12D | 109.5 | H24B—C24—H24C | 109.5 |
C11—C12'—H12E | 109.5 | C22—C25—H25A | 109.5 |
H12D—C12'—H12E | 109.5 | C22—C25—H25B | 109.5 |
C11—C12'—H12F | 109.5 | H25A—C25—H25B | 109.5 |
H12D—C12'—H12F | 109.5 | C22—C25—H25C | 109.5 |
H12E—C12'—H12F | 109.5 | H25A—C25—H25C | 109.5 |
C11—C13—H13A | 109.5 | H25B—C25—H25C | 109.5 |
C11—C13—H13B | 109.5 | C1—N1—C4 | 124.5 (3) |
H13A—C13—H13B | 109.5 | C1—N1—C3 | 110.2 (3) |
C11—C13—H13C | 109.5 | C4—N1—C3 | 124.1 (3) |
H13A—C13—H13C | 109.5 | C1—N2—C15 | 126.6 (3) |
H13B—C13—H13C | 109.5 | C1—N2—C2 | 110.1 (3) |
C11—C13'—H13D | 109.5 | C15—N2—C2 | 122.9 (3) |
C11—C13'—H13E | 109.5 | H1A—O1—H1B | 120 (5) |
N2—C2—C3—N1 | −7.2 (3) | C15—C16—C17—C18 | 179.9 (4) |
N1—C4—C5—C10 | −155.8 (3) | C16—C17—C18—C19 | 0.7 (7) |
N1—C4—C5—C6 | 28.6 (4) | C17—C18—C19—C20 | −1.2 (6) |
C10—C5—C6—C7 | −0.8 (5) | C17—C18—C19—C22 | −178.0 (4) |
C4—C5—C6—C7 | 174.8 (3) | C18—C19—C20—C21 | 0.8 (6) |
C5—C6—C7—C8 | −0.8 (5) | C22—C19—C20—C21 | 177.6 (4) |
C6—C7—C8—C9 | 1.1 (5) | C17—C16—C21—C20 | −0.7 (6) |
C6—C7—C8—C11 | −178.1 (3) | C15—C16—C21—C20 | 179.7 (4) |
C7—C8—C9—C10 | 0.2 (5) | C19—C20—C21—C16 | 0.2 (7) |
C11—C8—C9—C10 | 179.3 (3) | C20—C19—C22—C23 | 156.2 (4) |
C6—C5—C10—C9 | 2.1 (5) | C18—C19—C22—C23 | −27.1 (5) |
C4—C5—C10—C9 | −173.7 (3) | C20—C19—C22—C24 | −83.8 (5) |
C8—C9—C10—C5 | −1.8 (6) | C18—C19—C22—C24 | 92.9 (5) |
C9—C8—C11—C12 | 134.6 (5) | C20—C19—C22—C25 | 35.9 (5) |
C7—C8—C11—C12 | −46.3 (6) | C18—C19—C22—C25 | −147.4 (4) |
C9—C8—C11—C12' | 77.5 (13) | N2—C1—N1—C4 | −170.4 (3) |
C7—C8—C11—C12' | −103.5 (13) | N2—C1—N1—C3 | −2.6 (4) |
C9—C8—C11—C13' | −49.7 (13) | C5—C4—N1—C1 | −120.4 (3) |
C7—C8—C11—C13' | 129.4 (13) | C5—C4—N1—C3 | 73.4 (4) |
C9—C8—C11—C14 | −104.8 (5) | C2—C3—N1—C1 | 6.3 (3) |
C7—C8—C11—C14 | 74.3 (5) | C2—C3—N1—C4 | 174.2 (3) |
C9—C8—C11—C13 | 13.3 (6) | N1—C1—N2—C15 | −175.2 (3) |
C7—C8—C11—C13 | −167.7 (5) | N1—C1—N2—C2 | −2.6 (4) |
C9—C8—C11—C14' | −164.9 (9) | C16—C15—N2—C1 | −121.4 (4) |
C7—C8—C11—C14' | 14.2 (10) | C16—C15—N2—C2 | 66.8 (4) |
N2—C15—C16—C21 | −130.9 (4) | C3—C2—N2—C1 | 6.2 (4) |
N2—C15—C16—C17 | 49.5 (5) | C3—C2—N2—C15 | 179.2 (3) |
C21—C16—C17—C18 | 0.3 (6) |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1A···Cl1i | 0.86 (4) | 2.36 (4) | 3.206 (3) | 174 (4) |
C3—H3B···O1ii | 0.96 | 2.53 | 3.304 (4) | 138 |
C17—H17···O1i | 0.96 | 2.47 | 3.423 (5) | 175 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x+1, y−1/2, −z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C25H35N2+·Cl−·H2O |
Mr | 417.02 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 153 |
a, b, c (Å) | 18.205 (4), 10.148 (2), 13.452 (3) |
β (°) | 100.01 (3) |
V (Å3) | 2447.3 (9) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.17 |
Crystal size (mm) | 0.43 × 0.17 × 0.05 |
Data collection | |
Diffractometer | Rigaku AFC 8S Mercury CCD diffractometer |
Absorption correction | Multi-scan (Jacobson, 1998) |
Tmin, Tmax | 0.929, 0.991 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 17800, 4297, 2886 |
Rint | 0.072 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.069, 0.207, 1.03 |
No. of reflections | 4297 |
No. of parameters | 299 |
No. of restraints | 50 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.28, −0.26 |
Computer programs: CrystalClear (Rigaku/MSC, 2006), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1A···Cl1i | 0.86 (4) | 2.36 (4) | 3.206 (3) | 174 (4) |
C3—H3B···O1ii | 0.96 | 2.53 | 3.304 (4) | 138 |
C17—H17···O1i | 0.96 | 2.47 | 3.423 (5) | 175 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x+1, y−1/2, −z+1/2. |
Acknowledgements
We thank the Technological and Scientific Research Council of Turkey TÜBİTAK-CNRS [TBAG-U/181 (106 T716)] and İnönü University Research Fund (BAP: 2008-Güdümlü3) for financial support.
References
Allen, F. H., Kennard, O., Watson, D. G., Brammer, L., Orpen, A. G. & Taylor, R. (1987). J. Chem. Soc. Perkin Trans. 2, pp. S1–19. CrossRef Web of Science Google Scholar
Arslan, H., VanDerveer, D., Gök, Y., Özdemir, I. & Çetinkaya, B. (2009a). Acta Cryst. E65, o109–o110. Web of Science CSD CrossRef IUCr Journals Google Scholar
Arslan, H., VanDerveer, D., Yaşar, S., Özdemir, İ. & Çetinkaya, B. (2009b). Acta Cryst. E65, o121–o122. Web of Science CSD CrossRef IUCr Journals Google Scholar
Cremer, D. & Pople, J. A. (1975). J. Am. Chem. Soc. 97, 1354–1358. CrossRef CAS Web of Science Google Scholar
Glorius, F. (2007). Topics in Organometallic Chemistry Vol. 21, N-Heterocyclic Carbenes in Transition Metal Catalysis. Heidelberg: Springer. Google Scholar
Herrmann, W. A., Reisinger, C. P. & Spiegler, M. (1998). J. Organomet. Chem. 557, 93–96. CAS Google Scholar
Jacobson, R. (1998). REQAB. Molecular Structure Corporation, The Woodlands, Texas, USA. Google Scholar
Nardelli, M. (1983). Acta Cryst. C39, 1141–1142. CrossRef CAS Web of Science IUCr Journals Google Scholar
Nolan, S. P. (2006). N-Heterocyclic Carbenes in Synthesis. Weinheim: Wiley. Google Scholar
Özdemir, I., Alıcı, B., Gürbüz, N., Çetinkaya, E. & Çetinkaya, B. (2004b). J. Mol. Catal. A Chem. 217, 37–40. Google Scholar
Özdemir, I., Gök, Y., Gürbüz, N., Çetinkaya, E. & Çetinkaya, B. (2004a). Heteroat. Chem. 15, 419–423. Google Scholar
Rigaku/MSC (2006). CrystalClear. Rigaku/MSC, The Woodlands, Texas, USA. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Yaşar, S., Özdemir, I., Çetinkaya, B., Renaud, J. L. & Bruneau, C. (2008). Eur. J. Org. Chem. 12, 2142–2149. Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The first report of the application of N-heterocyclic carbenes compounds to various reactions was in 1998 (Herrmann et al., 1998). The metal complexes of N-heterocyclic carbene ligands have revealed excellent catalytic properties in a wide range of metal-catalyzed transformations such as Heck, Suzuki and Sonogashira couplings, Buchwald Hartwig amination, and olefin metathesis (Glorius, 2007; Nolan, 2006).
The use and characterization of an in situ formed imidazolidin-2-ylidene, tetrahydropyrimidin-2-ylidene, and the tetrahydrodiazepin-2-ylidene/palladium(II) system, which exhibits high activity in various coupling reactions of aryl bromides and aryl chlorides has been previously reported by our team (Yaşar et al., 2008; Arslan et al., 2009a, 2009b, and references therein). In order to obtain a more stable, efficient and active system, we have also investigated benzo-annelated derivatives (Özdemir et al., 2004a, 2004b; Yaşar et al., 2008). In the present work, we report the preparation and characterization of one of them, 1,3-bis(4-tert-butylbenzyl)-4,5-dihydroimidazolium chloride monohydrate, (I). The title compound was purified by re-crystallization from an ethanol:dichloromethane mixture (1:1) and characterized by elemental analysis, 1H and 13C-NMR and IR spectroscopy. The analytical and spectroscopic data are consistent with the proposed structure given in Scheme 1.
The molecular structure of the title compound is depicted in Fig. 1. The crystal structure is composed of a 1,3-bis(4-tert-butylbenzyl)-4,5-dihydroimidazolium cation, a Cl- anion and a water molecule. The imidazolidine ring adopts a twisted conformation with a pseudo-twofold axis passing through C1 and the C2—C3 bond. The puckering parameters (Cremer & Pople, 1975) and the smallest displacement asymmetry parameter (Nardelli, 1983) for the imidazolidine ring are q2 = 0.073 (3) Å, ϕ2 = 306 (3)o and ΔC2(C1) = 0.1 (3), ΔCs(C1) = 9.6 (3). The largest deviations from the mean plane of C1—N1—C3—C2—N2 ring are 0.044 (4) Å and 0.044 (3) Å for atom C2 and C3 atoms, respectively. One of the t-butyl groups is disordered over two conformations, with occupancies of 0.714 (8) and 0.286 (8).
The C—N bond lengths of N1—C1 and N2—C1 are shorter than the average single C—N bond length of 1.48 Å, being N1—C1 =1.319 (4) Å, N2—C1 = 1.312 (4) Å. The other C—N bond lengths (N1—C3 = 1.463 (4) Å, N2—C2 = 1.475 (4), N1—C4 = 1.458 (4) Å and N2—C15 = 1.449 (4) Å) are very close the average single C—N bond lengths. Therefore, we can easily say that the bonds in the N1—C1—N2 fragment of the imidazolidine ring are between double and single bond in character with partial electron delocalization. In addition, the sum of the bond angles around N1 (358.7°) and N2 (359.6°) indicate sp2 hybridization. The other bond lengths in (I) are in the normal ranges (Allen et al., 1987).
The crystal packing is shown in Fig. 2. Although there are no intramolecular D—H···A contacts, intermolecular C—H···O and O—H···Cl hydrogen bonds link the molecules of (I) into one-dimensional chains extending along the [010] direction (Table 1).