organic compounds
N-Cyclohexyl-3-(4-hydroxy-6-oxo-1,6-dihydropyrimidin-5-yl)-3-p-tolylpropanamide
aSchool of Chemistry and Chemical Engineering, Xuzhou Normal University, Xuzhou 221116, People's Republic of China
*Correspondence e-mail: laotu2001@263.net
In the molecule of the title compound, C20H25N3O3, the aromatic rings are oriented at a dihedral angle of 88.36 (3)°. The cyclohexane ring adopts a chair conformation. In the intermolecular N—H⋯O and O—H⋯N hydrogen bonds link the molecules. C—H⋯π interactions are also present.
Related literature
For general background, see: Johar et al. (2005); Janeba et al. (2005); Soloducho et al. (2003); Mathews & Asokan (2007); Lagoja (2005); Michael (2005); Erian (1993). For bond-length data, see: Allen et al. (1987). For ring-puckering parameters, see: Cremer & Pople (1975).
Experimental
Crystal data
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Refinement
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Data collection: SMART (Bruker, 1998); cell SAINT (Bruker, 1998); data reduction: SAINT (Bruker, 1998); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Bruker, 1998); software used to prepare material for publication: SHELXTL (Bruker, 1998).
Supporting information
10.1107/S1600536809001251/hk2610sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809001251/hk2610Isup2.hkl
The title compound was prepared by the reaction of p-tolylidene-Meldrum's acid (1 mmol) with 6-hydroxypyrimidin-4(3H)-one (1 mmol) and cyclohexanamine (1 mmol) at 373 K in glacial acetic acid under microwave irradiation (maximum power 250 W, initial power 100 W) for 18 min (yield; 83%, m.p. 534–536 K). Crystals suitable for X-ray analysis were obtained from an ethanol solution by slow evaporation.
H atoms were positioned geometrically, with O-H = 0.82 Å (for OH), N-H = 0.86 Å (for NH) and C-H = 0.93, 0.98, 0.97 and 0.96 Å for aromatic, methine, methylene and methyl H, respectively, and constrained to ride on their parent atoms, with Uiso(H) = xUeq(C,N,O), where x = 1.5 for methyl and OH H and x = 1.2 for all other H atoms.
Data collection: SMART (Bruker, 1998); cell
SAINT (Bruker, 1998); data reduction: SAINT (Bruker, 1998); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Bruker, 1998); software used to prepare material for publication: SHELXTL (Bruker, 1998).Fig. 1. The molecular structure of the title molecule, with the atom-numbering scheme. Displacement ellipsoids are drawn at the 50% probability level. |
C20H25N3O3 | F(000) = 760 |
Mr = 355.43 | Dx = 1.293 Mg m−3 |
Monoclinic, P21/n | Melting point = 534–536 K |
Hall symbol: -P 2yn | Mo Kα radiation, λ = 0.71073 Å |
a = 7.1563 (12) Å | Cell parameters from 1921 reflections |
b = 19.637 (2) Å | θ = 2.6–27.7° |
c = 13.2746 (18) Å | µ = 0.09 mm−1 |
β = 101.740 (2)° | T = 298 K |
V = 1826.5 (4) Å3 | Block, colorless |
Z = 4 | 0.23 × 0.16 × 0.14 mm |
Bruker SMART CCD area-detector diffractometer | 3216 independent reflections |
Radiation source: fine-focus sealed tube | 1916 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.073 |
ϕ and ω scans | θmax = 25.0°, θmin = 1.9° |
Absorption correction: multi-scan (SADABS; Bruker, 1998) | h = −8→8 |
Tmin = 0.980, Tmax = 0.988 | k = −23→21 |
9491 measured reflections | l = −15→15 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.048 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.104 | H-atom parameters constrained |
S = 1.02 | w = 1/[σ2(Fo2) + (0.0354P)2] where P = (Fo2 + 2Fc2)/3 |
3216 reflections | (Δ/σ)max = 0.001 |
235 parameters | Δρmax = 0.16 e Å−3 |
0 restraints | Δρmin = −0.19 e Å−3 |
C20H25N3O3 | V = 1826.5 (4) Å3 |
Mr = 355.43 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 7.1563 (12) Å | µ = 0.09 mm−1 |
b = 19.637 (2) Å | T = 298 K |
c = 13.2746 (18) Å | 0.23 × 0.16 × 0.14 mm |
β = 101.740 (2)° |
Bruker SMART CCD area-detector diffractometer | 3216 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 1998) | 1916 reflections with I > 2σ(I) |
Tmin = 0.980, Tmax = 0.988 | Rint = 0.073 |
9491 measured reflections |
R[F2 > 2σ(F2)] = 0.048 | 0 restraints |
wR(F2) = 0.104 | H-atom parameters constrained |
S = 1.02 | Δρmax = 0.16 e Å−3 |
3216 reflections | Δρmin = −0.19 e Å−3 |
235 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.8327 (2) | 1.04303 (8) | 0.89288 (11) | 0.0456 (5) | |
H1A | 0.8598 | 1.0297 | 0.9526 | 0.068* | |
O2 | 1.1335 (2) | 1.04358 (9) | 0.60752 (11) | 0.0511 (5) | |
O3 | 0.5892 (2) | 0.93937 (8) | 0.69802 (11) | 0.0447 (4) | |
N1 | 1.2782 (3) | 1.00038 (10) | 0.76292 (14) | 0.0387 (5) | |
H1 | 1.3786 | 0.9909 | 0.7394 | 0.046* | |
N2 | 1.1340 (3) | 0.99789 (9) | 0.90587 (13) | 0.0367 (5) | |
N3 | 0.7956 (3) | 0.91122 (9) | 0.59665 (13) | 0.0378 (5) | |
H3 | 0.8514 | 0.9251 | 0.5488 | 0.045* | |
C1 | 1.2753 (3) | 0.98462 (12) | 0.86043 (17) | 0.0396 (6) | |
H1B | 1.3815 | 0.9626 | 0.8987 | 0.048* | |
C2 | 0.9778 (3) | 1.02944 (11) | 0.84599 (16) | 0.0316 (5) | |
C3 | 0.9650 (3) | 1.04690 (10) | 0.74467 (15) | 0.0290 (5) | |
C4 | 1.1234 (3) | 1.03189 (11) | 0.69730 (17) | 0.0346 (6) | |
C5 | 0.6857 (3) | 0.95565 (11) | 0.63376 (16) | 0.0329 (6) | |
C6 | 0.6872 (3) | 1.02749 (11) | 0.59477 (16) | 0.0350 (6) | |
H6A | 0.5572 | 1.0422 | 0.5679 | 0.042* | |
H6B | 0.7563 | 1.0291 | 0.5391 | 0.042* | |
C7 | 0.7820 (3) | 1.07626 (11) | 0.68124 (15) | 0.0317 (6) | |
H7 | 0.6931 | 1.0795 | 0.7283 | 0.038* | |
C8 | 0.8005 (3) | 1.14835 (11) | 0.64204 (16) | 0.0302 (5) | |
C9 | 0.6815 (3) | 1.17248 (12) | 0.55327 (17) | 0.0366 (6) | |
H9 | 0.6022 | 1.1421 | 0.5108 | 0.044* | |
C10 | 0.6781 (3) | 1.24068 (12) | 0.52658 (18) | 0.0400 (6) | |
H10 | 0.5952 | 1.2553 | 0.4672 | 0.048* | |
C11 | 0.7955 (4) | 1.28759 (12) | 0.58638 (19) | 0.0393 (6) | |
C12 | 0.9218 (4) | 1.26311 (12) | 0.67173 (19) | 0.0412 (6) | |
H12 | 1.0068 | 1.2931 | 0.7115 | 0.049* | |
C13 | 0.9251 (3) | 1.19530 (12) | 0.69940 (17) | 0.0367 (6) | |
H13 | 1.0118 | 1.1806 | 0.7573 | 0.044* | |
C14 | 0.7807 (4) | 1.36269 (12) | 0.5595 (2) | 0.0587 (8) | |
H14A | 0.8643 | 1.3731 | 0.5135 | 0.088* | |
H14B | 0.8168 | 1.3892 | 0.6212 | 0.088* | |
H14C | 0.6517 | 1.3734 | 0.5269 | 0.088* | |
C15 | 0.8280 (3) | 0.84081 (11) | 0.63122 (17) | 0.0367 (6) | |
H15 | 0.7200 | 0.8266 | 0.6614 | 0.044* | |
C16 | 1.0092 (4) | 0.83383 (13) | 0.71338 (18) | 0.0488 (7) | |
H16A | 0.9999 | 0.8627 | 0.7714 | 0.059* | |
H16B | 1.1174 | 0.8492 | 0.6857 | 0.059* | |
C17 | 1.0429 (4) | 0.76056 (13) | 0.75025 (19) | 0.0532 (7) | |
H17A | 1.1649 | 0.7576 | 0.7979 | 0.064* | |
H17B | 0.9442 | 0.7473 | 0.7868 | 0.064* | |
C18 | 1.0418 (4) | 0.71171 (14) | 0.6614 (2) | 0.0593 (8) | |
H18A | 1.1538 | 0.7198 | 0.6324 | 0.071* | |
H18B | 1.0483 | 0.6653 | 0.6869 | 0.071* | |
C19 | 0.8642 (4) | 0.72005 (12) | 0.5780 (2) | 0.0556 (8) | |
H19A | 0.7536 | 0.7057 | 0.6043 | 0.067* | |
H19B | 0.8738 | 0.6910 | 0.5202 | 0.067* | |
C20 | 0.8367 (4) | 0.79365 (12) | 0.54125 (18) | 0.0435 (6) | |
H20A | 0.9418 | 0.8070 | 0.5095 | 0.052* | |
H20B | 0.7195 | 0.7975 | 0.4900 | 0.052* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0413 (10) | 0.0669 (13) | 0.0301 (9) | 0.0186 (9) | 0.0109 (8) | 0.0084 (8) |
O2 | 0.0557 (12) | 0.0680 (13) | 0.0339 (10) | 0.0139 (10) | 0.0193 (9) | 0.0113 (8) |
O3 | 0.0467 (11) | 0.0426 (10) | 0.0503 (10) | 0.0067 (8) | 0.0227 (9) | 0.0080 (8) |
N1 | 0.0312 (12) | 0.0497 (13) | 0.0373 (11) | 0.0088 (10) | 0.0120 (10) | 0.0044 (10) |
N2 | 0.0357 (12) | 0.0444 (13) | 0.0295 (11) | 0.0122 (10) | 0.0057 (9) | 0.0041 (9) |
N3 | 0.0432 (13) | 0.0354 (12) | 0.0390 (11) | 0.0032 (10) | 0.0185 (10) | 0.0063 (9) |
C1 | 0.0356 (15) | 0.0456 (15) | 0.0353 (14) | 0.0085 (12) | 0.0020 (12) | 0.0041 (11) |
C2 | 0.0292 (13) | 0.0365 (14) | 0.0286 (13) | 0.0043 (11) | 0.0047 (11) | −0.0004 (10) |
C3 | 0.0301 (13) | 0.0301 (13) | 0.0257 (12) | 0.0031 (11) | 0.0030 (10) | 0.0007 (10) |
C4 | 0.0371 (15) | 0.0360 (14) | 0.0304 (13) | 0.0042 (12) | 0.0061 (12) | 0.0026 (11) |
C5 | 0.0296 (14) | 0.0373 (15) | 0.0302 (13) | −0.0008 (11) | 0.0024 (11) | 0.0011 (11) |
C6 | 0.0363 (15) | 0.0344 (14) | 0.0319 (13) | 0.0028 (11) | 0.0016 (11) | 0.0038 (10) |
C7 | 0.0340 (14) | 0.0347 (14) | 0.0263 (12) | 0.0042 (11) | 0.0059 (11) | 0.0018 (10) |
C8 | 0.0277 (13) | 0.0324 (14) | 0.0305 (13) | 0.0052 (11) | 0.0063 (11) | 0.0021 (11) |
C9 | 0.0315 (14) | 0.0359 (15) | 0.0403 (14) | −0.0024 (11) | 0.0020 (12) | 0.0036 (11) |
C10 | 0.0372 (15) | 0.0397 (15) | 0.0420 (15) | 0.0012 (13) | 0.0053 (12) | 0.0081 (12) |
C11 | 0.0348 (15) | 0.0356 (15) | 0.0493 (16) | 0.0008 (12) | 0.0130 (13) | 0.0031 (12) |
C12 | 0.0328 (15) | 0.0378 (15) | 0.0537 (17) | −0.0081 (12) | 0.0104 (13) | −0.0084 (12) |
C13 | 0.0292 (14) | 0.0418 (15) | 0.0376 (14) | 0.0014 (12) | 0.0034 (12) | −0.0012 (11) |
C14 | 0.066 (2) | 0.0381 (17) | 0.0760 (19) | 0.0006 (14) | 0.0241 (16) | 0.0061 (14) |
C15 | 0.0355 (15) | 0.0356 (15) | 0.0413 (14) | 0.0049 (11) | 0.0132 (12) | 0.0074 (11) |
C16 | 0.0460 (17) | 0.0539 (17) | 0.0462 (16) | 0.0012 (14) | 0.0090 (14) | 0.0077 (13) |
C17 | 0.0423 (17) | 0.0642 (19) | 0.0551 (17) | 0.0101 (14) | 0.0148 (14) | 0.0224 (15) |
C18 | 0.0567 (19) | 0.0523 (19) | 0.075 (2) | 0.0196 (15) | 0.0281 (17) | 0.0207 (15) |
C19 | 0.059 (2) | 0.0414 (17) | 0.071 (2) | 0.0062 (14) | 0.0233 (17) | −0.0026 (14) |
C20 | 0.0406 (16) | 0.0427 (16) | 0.0477 (15) | 0.0063 (13) | 0.0099 (13) | −0.0021 (12) |
N1—C1 | 1.335 (3) | C10—H10 | 0.9300 |
N1—C4 | 1.406 (3) | C11—C12 | 1.384 (3) |
N1—H1 | 0.8600 | C11—C14 | 1.516 (3) |
N2—C1 | 1.305 (3) | C12—C13 | 1.380 (3) |
N2—C2 | 1.380 (3) | C12—H12 | 0.9300 |
N3—C5 | 1.334 (3) | C13—H13 | 0.9300 |
N3—C15 | 1.460 (3) | C14—H14A | 0.9600 |
N3—H3 | 0.8600 | C14—H14B | 0.9600 |
O1—C2 | 1.341 (2) | C14—H14C | 0.9600 |
O1—H1A | 0.8200 | C15—C16 | 1.522 (3) |
O2—C4 | 1.230 (2) | C15—C20 | 1.523 (3) |
O3—C5 | 1.244 (2) | C15—H15 | 0.9800 |
C1—H1B | 0.9300 | C16—C17 | 1.523 (3) |
C2—C3 | 1.373 (3) | C16—H16A | 0.9700 |
C3—C4 | 1.435 (3) | C16—H16B | 0.9700 |
C3—C7 | 1.519 (3) | C17—C18 | 1.519 (4) |
C5—C6 | 1.504 (3) | C17—H17A | 0.9700 |
C6—C7 | 1.542 (3) | C17—H17B | 0.9700 |
C6—H6A | 0.9700 | C18—C19 | 1.515 (4) |
C6—H6B | 0.9700 | C18—H18A | 0.9700 |
C7—C8 | 1.523 (3) | C18—H18B | 0.9700 |
C7—H7 | 0.9800 | C19—C20 | 1.525 (3) |
C8—C9 | 1.390 (3) | C19—H19A | 0.9700 |
C8—C13 | 1.396 (3) | C19—H19B | 0.9700 |
C9—C10 | 1.384 (3) | C20—H20A | 0.9700 |
C9—H9 | 0.9300 | C20—H20B | 0.9700 |
C10—C11 | 1.383 (3) | ||
C1—N1—C4 | 122.5 (2) | C13—C12—H12 | 119.1 |
C1—N1—H1 | 118.8 | C11—C12—H12 | 119.1 |
C4—N1—H1 | 118.8 | C12—C13—C8 | 121.2 (2) |
C1—N2—C2 | 115.89 (18) | C12—C13—H13 | 119.4 |
C5—N3—C15 | 124.82 (18) | C8—C13—H13 | 119.4 |
C5—N3—H3 | 117.6 | C11—C14—H14A | 109.5 |
C15—N3—H3 | 117.6 | C11—C14—H14B | 109.5 |
C2—O1—H1A | 109.5 | H14A—C14—H14B | 109.5 |
N2—C1—N1 | 124.6 (2) | C11—C14—H14C | 109.5 |
N2—C1—H1B | 117.7 | H14A—C14—H14C | 109.5 |
N1—C1—H1B | 117.7 | H14B—C14—H14C | 109.5 |
O1—C2—C3 | 120.1 (2) | N3—C15—C16 | 111.59 (19) |
O1—C2—N2 | 115.78 (18) | N3—C15—C20 | 111.02 (18) |
C3—C2—N2 | 124.1 (2) | C16—C15—C20 | 110.01 (19) |
C2—C3—C4 | 118.5 (2) | N3—C15—H15 | 108.0 |
C2—C3—C7 | 121.06 (19) | C16—C15—H15 | 108.0 |
C4—C3—C7 | 120.26 (18) | C20—C15—H15 | 108.0 |
O2—C4—N1 | 119.2 (2) | C15—C16—C17 | 111.8 (2) |
O2—C4—C3 | 126.4 (2) | C15—C16—H16A | 109.3 |
N1—C4—C3 | 114.34 (18) | C17—C16—H16A | 109.3 |
O3—C5—N3 | 122.4 (2) | C15—C16—H16B | 109.3 |
O3—C5—C6 | 121.4 (2) | C17—C16—H16B | 109.3 |
N3—C5—C6 | 116.14 (19) | H16A—C16—H16B | 107.9 |
C5—C6—C7 | 111.05 (17) | C18—C17—C16 | 111.8 (2) |
C5—C6—H6A | 109.4 | C18—C17—H17A | 109.3 |
C7—C6—H6A | 109.4 | C16—C17—H17A | 109.3 |
C5—C6—H6B | 109.4 | C18—C17—H17B | 109.3 |
C7—C6—H6B | 109.4 | C16—C17—H17B | 109.3 |
H6A—C6—H6B | 108.0 | H17A—C17—H17B | 107.9 |
C3—C7—C8 | 114.65 (18) | C19—C18—C17 | 111.7 (2) |
C3—C7—C6 | 112.09 (17) | C19—C18—H18A | 109.3 |
C8—C7—C6 | 112.24 (17) | C17—C18—H18A | 109.3 |
C3—C7—H7 | 105.7 | C19—C18—H18B | 109.3 |
C8—C7—H7 | 105.7 | C17—C18—H18B | 109.3 |
C6—C7—H7 | 105.7 | H18A—C18—H18B | 107.9 |
C9—C8—C13 | 116.8 (2) | C18—C19—C20 | 111.7 (2) |
C9—C8—C7 | 121.7 (2) | C18—C19—H19A | 109.3 |
C13—C8—C7 | 121.2 (2) | C20—C19—H19A | 109.3 |
C10—C9—C8 | 121.5 (2) | C18—C19—H19B | 109.3 |
C10—C9—H9 | 119.2 | C20—C19—H19B | 109.3 |
C8—C9—H9 | 119.2 | H19A—C19—H19B | 107.9 |
C11—C10—C9 | 121.4 (2) | C15—C20—C19 | 110.4 (2) |
C11—C10—H10 | 119.3 | C15—C20—H20A | 109.6 |
C9—C10—H10 | 119.3 | C19—C20—H20A | 109.6 |
C10—C11—C12 | 117.3 (2) | C15—C20—H20B | 109.6 |
C10—C11—C14 | 120.5 (2) | C19—C20—H20B | 109.6 |
C12—C11—C14 | 122.2 (2) | H20A—C20—H20B | 108.1 |
C13—C12—C11 | 121.7 (2) | ||
C2—N2—C1—N1 | 1.1 (3) | C3—C7—C8—C9 | 153.35 (19) |
C4—N1—C1—N2 | −1.8 (4) | C6—C7—C8—C9 | 24.0 (3) |
C1—N2—C2—O1 | 180.0 (2) | C3—C7—C8—C13 | −33.2 (3) |
C1—N2—C2—C3 | −0.1 (3) | C6—C7—C8—C13 | −162.62 (19) |
O1—C2—C3—C4 | 179.7 (2) | C13—C8—C9—C10 | −4.0 (3) |
N2—C2—C3—C4 | −0.3 (3) | C7—C8—C9—C10 | 169.7 (2) |
O1—C2—C3—C7 | −5.2 (3) | C8—C9—C10—C11 | 1.0 (3) |
N2—C2—C3—C7 | 174.9 (2) | C9—C10—C11—C12 | 2.5 (3) |
C1—N1—C4—O2 | −178.3 (2) | C9—C10—C11—C14 | −176.1 (2) |
C1—N1—C4—C3 | 1.3 (3) | C10—C11—C12—C13 | −3.1 (3) |
C2—C3—C4—O2 | 179.2 (2) | C14—C11—C12—C13 | 175.5 (2) |
C7—C3—C4—O2 | 4.0 (4) | C11—C12—C13—C8 | 0.1 (3) |
C2—C3—C4—N1 | −0.3 (3) | C9—C8—C13—C12 | 3.4 (3) |
C7—C3—C4—N1 | −175.56 (18) | C7—C8—C13—C12 | −170.3 (2) |
C15—N3—C5—O3 | −4.8 (3) | C5—N3—C15—C16 | −94.9 (3) |
C15—N3—C5—C6 | 174.2 (2) | C5—N3—C15—C20 | 142.0 (2) |
O3—C5—C6—C7 | 66.6 (3) | N3—C15—C16—C17 | 179.60 (18) |
N3—C5—C6—C7 | −112.4 (2) | C20—C15—C16—C17 | −56.7 (3) |
C2—C3—C7—C8 | 117.4 (2) | C15—C16—C17—C18 | 54.0 (3) |
C4—C3—C7—C8 | −67.5 (3) | C16—C17—C18—C19 | −52.2 (3) |
C2—C3—C7—C6 | −113.1 (2) | C17—C18—C19—C20 | 54.0 (3) |
C4—C3—C7—C6 | 62.0 (3) | N3—C15—C20—C19 | −178.2 (2) |
C5—C6—C7—C3 | 44.5 (2) | C16—C15—C20—C19 | 57.8 (3) |
C5—C6—C7—C8 | 175.24 (18) | C18—C19—C20—C15 | −57.0 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O3i | 0.86 | 1.98 | 2.813 (3) | 162 |
O1—H1A···N2ii | 0.82 | 1.95 | 2.753 (3) | 168 |
N3—H3···O2iii | 0.86 | 2.19 | 2.992 (4) | 155 |
C17—H17B···Cg2iv | 0.97 | 2.47 | 3.440 (3) | 177 |
C20—H20A···Cg2v | 0.97 | 2.74 | 3.629 (3) | 152 |
Symmetry codes: (i) x+1, y, z; (ii) −x+2, −y+2, −z+2; (iii) −x+2, −y+2, −z+1; (iv) −x+1/2, y+1/2, −z+1/2; (v) −x, −y, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C20H25N3O3 |
Mr | 355.43 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 298 |
a, b, c (Å) | 7.1563 (12), 19.637 (2), 13.2746 (18) |
β (°) | 101.740 (2) |
V (Å3) | 1826.5 (4) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.09 |
Crystal size (mm) | 0.23 × 0.16 × 0.14 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 1998) |
Tmin, Tmax | 0.980, 0.988 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 9491, 3216, 1916 |
Rint | 0.073 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.048, 0.104, 1.02 |
No. of reflections | 3216 |
No. of parameters | 235 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.16, −0.19 |
Computer programs: SMART (Bruker, 1998), SAINT (Bruker, 1998), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Bruker, 1998).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O3i | 0.86 | 1.98 | 2.813 (3) | 162 |
O1—H1A···N2ii | 0.82 | 1.95 | 2.753 (3) | 168 |
N3—H3···O2iii | 0.86 | 2.19 | 2.992 (4) | 155 |
C17—H17B···Cg2iv | 0.97 | 2.47 | 3.440 (3) | 177 |
C20—H20A···Cg2v | 0.97 | 2.74 | 3.629 (3) | 152 |
Symmetry codes: (i) x+1, y, z; (ii) −x+2, −y+2, −z+2; (iii) −x+2, −y+2, −z+1; (iv) −x+1/2, y+1/2, −z+1/2; (v) −x, −y, −z+1. |
Acknowledgements
We thank the Natural Science Foundation of China (grant No. 20672090) and Natural Science Foundation of Jiangsu Province (grant No. BK2006033).
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The pyrimidines and their derivatives as a class of extremely important heterocyclic compounds are used in a wide array of synthetic and industrial applications. Not only they are an integral part of the genetic materials, viz. DNA and RNA as nucleotides and nucleosides but also play critical roles especially in pharmaceutical fields (Johar et al., 2005; Janeba et al., 2005). Some pyrimidine derivatives can give stable and good quality nanomaterials having many important electrical and optical properties (Soloducho et al., 2003; Mathews & Asokan, 2007), and also used as functional materials (Lagoja, 2005; Michael, 2005; Erian, 1993). We report herein the crystal structure of the title compound.
In the molecule of the title compound (Fig 1), the bond lengths (Allen et al., 1987) and angles are within normal ranges. Rings A (N1/N2/C1-C4) and B (C8-C13) are, of course, planar, and they are oriented at a dihedral angle of 88.36 (3)°. The cyclohexane ring C (C15-C20), having total puckering amplitude, QT, of 0.565 (3) Å, chair conformation [ϕ = -30.33 (3)° and θ = 4.00 (3)°] (Cremer & Pople, 1975).
In the crystal structure, intermolecular N-H···O and O-H···N hydrogen bonds (Table 1) link the molecules, in which they may be effective in the stabilization of the structure. There also exist C–H···π interactions (Table 1).