organic compounds
1-(3-Chlorophenyl)-3-(2,6-dichlorobenzoyl)thiourea
aDepartment of Chemistry, Quaid-i-Azam University, Islamabad 45320, Pakistan, bInstitut für Anorganische Chemie, J. W. Goethe-Universität Frankfurt, Max-von-Laue-Strasse 7, 60438 Frankfurt/Main, Germany, and cDepartment of Chemistry, Islamia University of Bahawalpur, Pakistan
*Correspondence e-mail: khawar_rauf@hotmail.com
The structure of the title compound, C14H9Cl3N2OS, is composed of discrete molecules with bond lengths and angles quite typical for thiourea compounds of this class. The plane containing the thiocarbonyl and carbonyl groups subtends dihedral angles of 48.19 (3) and 87.51 (3)° with the planes formed by the 3-chloro and 2,6-dichlorophenyl rings, respectively; the dihedral angle between the two benzene ring planes is 45.32 (3)°. An intramolecular N—H⋯O hydrogen bond stabilizes the molecular conformation and the molecules form intermolecular N—H⋯S and N—H⋯O hydrogen bonds, generating a sheet along the a axis.
Related literature
For related structures, see: Khawar Rauf et al., (2006a,b; 2007). For a description of the Cambridge structural Database, see: Allen (2002).
Experimental
Crystal data
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Refinement
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Data collection: X-AREA (Stoe & Cie, 2001); cell X-AREA; data reduction: X-AREA; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2003) and XP in SHELXTL-Plus (Sheldrick, 2008); software used to prepare material for publication: PLATON and SHELXL97.
Supporting information
10.1107/S1600536808043444/pv2127sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536808043444/pv2127Isup2.hkl
Freshly prepared and steam distillated 2,6-dichlorobenzoyl isothiocyanate (2.32 g, 10 mmol) was stirred in acetone (30 ml) for 20 minutes. Neat 3-chloroaniline (1.27 g, 10 mmol) was then added and the resulting mixture was stirred for 1 h. The reaction mixture was then poured into acidified (pH 4) water (approx. 300 ml) and stirred well. The solid product was separated, washed with deionized water and purified by recrystallization from methanol/1,1-dichloromethane (1:10 v/v) to give fine crystals of (I), with an overall yield of 85%.
Hydrogen atoms bonded to C were included in calculated positions and refined as riding on their parent C atom with C—H = 0.95 Å and Uiso(H) = 1.2Ueq(C). The H atoms bonded to N were freely refined.
Data collection: X-AREA (Stoe & Cie, 2001); cell
X-AREA (Stoe & Cie, 2001); data reduction: X-AREA (Stoe & Cie, 2001); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2003) and XP in SHELXTL-Plus (Sheldrick, 2008); software used to prepare material for publication: PLATON (Spek, 2003) and SHELXL97 (Sheldrick, 2008).C14H9Cl3N2OS | F(000) = 728 |
Mr = 359.64 | Dx = 1.527 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 37695 reflections |
a = 10.6589 (5) Å | θ = 3.7–31.2° |
b = 11.2114 (5) Å | µ = 0.72 mm−1 |
c = 13.2919 (6) Å | T = 173 K |
β = 99.942 (3)° | Block, colourless |
V = 1564.55 (12) Å3 | 0.47 × 0.47 × 0.45 mm |
Z = 4 |
Stoe IPDS-II two-circle diffractometer | 5066 independent reflections |
Radiation source: fine-focus sealed tube | 4674 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.046 |
ω scans | θmax = 31.3°, θmin = 3.6° |
Absorption correction: multi-scan (MULABS; Spek, 2003; Blessing, 1995) | h = −15→15 |
Tmin = 0.729, Tmax = 0.739 | k = −16→16 |
39690 measured reflections | l = −19→19 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.037 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.094 | w = 1/[σ2(Fo2) + (0.0404P)2 + 0.9365P] where P = (Fo2 + 2Fc2)/3 |
S = 1.06 | (Δ/σ)max = 0.001 |
5066 reflections | Δρmax = 0.65 e Å−3 |
199 parameters | Δρmin = −0.66 e Å−3 |
0 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0111 (12) |
C14H9Cl3N2OS | V = 1564.55 (12) Å3 |
Mr = 359.64 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 10.6589 (5) Å | µ = 0.72 mm−1 |
b = 11.2114 (5) Å | T = 173 K |
c = 13.2919 (6) Å | 0.47 × 0.47 × 0.45 mm |
β = 99.942 (3)° |
Stoe IPDS-II two-circle diffractometer | 5066 independent reflections |
Absorption correction: multi-scan (MULABS; Spek, 2003; Blessing, 1995) | 4674 reflections with I > 2σ(I) |
Tmin = 0.729, Tmax = 0.739 | Rint = 0.046 |
39690 measured reflections |
R[F2 > 2σ(F2)] = 0.037 | 0 restraints |
wR(F2) = 0.094 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.06 | Δρmax = 0.65 e Å−3 |
5066 reflections | Δρmin = −0.66 e Å−3 |
199 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S1 | 0.09625 (3) | 0.60027 (3) | 0.62517 (2) | 0.02474 (9) | |
Cl1 | 0.19574 (4) | 0.61905 (4) | 0.23352 (3) | 0.03999 (11) | |
Cl2 | 0.22323 (4) | 0.18815 (4) | 0.41908 (3) | 0.03969 (11) | |
Cl3 | 0.33122 (7) | 0.61484 (7) | 0.99688 (3) | 0.0735 (2) | |
C1 | 0.27158 (11) | 0.45474 (11) | 0.41547 (8) | 0.0182 (2) | |
O1 | 0.38737 (8) | 0.46303 (10) | 0.43625 (7) | 0.0285 (2) | |
N1 | 0.19003 (9) | 0.49493 (10) | 0.47738 (8) | 0.01915 (19) | |
H1 | 0.1105 (19) | 0.4841 (18) | 0.4559 (15) | 0.030 (5)* | |
C2 | 0.21866 (10) | 0.55197 (10) | 0.57210 (8) | 0.0174 (2) | |
N2 | 0.34238 (9) | 0.56439 (10) | 0.61243 (8) | 0.01918 (19) | |
H2 | 0.394 (2) | 0.5442 (19) | 0.5770 (15) | 0.032 (5)* | |
C11 | 0.20320 (10) | 0.39859 (11) | 0.31773 (8) | 0.0179 (2) | |
C12 | 0.16489 (13) | 0.46736 (13) | 0.23029 (10) | 0.0251 (2) | |
C13 | 0.09985 (17) | 0.41613 (18) | 0.14040 (11) | 0.0394 (4) | |
H13 | 0.0745 | 0.4639 | 0.0814 | 0.047* | |
C14 | 0.07264 (17) | 0.29526 (19) | 0.13789 (12) | 0.0421 (4) | |
H14 | 0.0275 | 0.2606 | 0.0770 | 0.051* | |
C15 | 0.11043 (15) | 0.22420 (15) | 0.22299 (12) | 0.0337 (3) | |
H15 | 0.0923 | 0.1412 | 0.2208 | 0.040* | |
C16 | 0.17558 (12) | 0.27683 (12) | 0.31200 (10) | 0.0232 (2) | |
C21 | 0.39003 (11) | 0.62132 (11) | 0.70818 (9) | 0.0195 (2) | |
C22 | 0.34464 (15) | 0.58955 (14) | 0.79662 (10) | 0.0289 (3) | |
H22 | 0.2822 | 0.5288 | 0.7953 | 0.035* | |
C23 | 0.39279 (16) | 0.64880 (16) | 0.88702 (10) | 0.0340 (3) | |
C24 | 0.48645 (15) | 0.73570 (15) | 0.89168 (11) | 0.0332 (3) | |
H24 | 0.5180 | 0.7752 | 0.9541 | 0.040* | |
C25 | 0.53305 (14) | 0.76367 (15) | 0.80313 (11) | 0.0318 (3) | |
H25 | 0.5984 | 0.8218 | 0.8053 | 0.038* | |
C26 | 0.48479 (12) | 0.70721 (13) | 0.71106 (10) | 0.0246 (2) | |
H26 | 0.5164 | 0.7273 | 0.6507 | 0.030* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.01676 (13) | 0.03383 (17) | 0.02412 (15) | −0.00159 (11) | 0.00495 (10) | −0.01452 (12) |
Cl1 | 0.0485 (2) | 0.02974 (18) | 0.0415 (2) | −0.00112 (15) | 0.00718 (16) | 0.00931 (14) |
Cl2 | 0.0507 (2) | 0.02793 (17) | 0.0402 (2) | 0.00109 (15) | 0.00724 (16) | 0.00754 (14) |
Cl3 | 0.1095 (5) | 0.0945 (5) | 0.02015 (18) | −0.0585 (4) | 0.0216 (2) | −0.0165 (2) |
C1 | 0.0160 (4) | 0.0228 (5) | 0.0156 (4) | 0.0010 (4) | 0.0018 (4) | −0.0044 (4) |
O1 | 0.0144 (4) | 0.0461 (6) | 0.0246 (4) | 0.0004 (4) | 0.0023 (3) | −0.0134 (4) |
N1 | 0.0133 (4) | 0.0275 (5) | 0.0163 (4) | −0.0008 (3) | 0.0016 (3) | −0.0081 (4) |
C2 | 0.0171 (5) | 0.0197 (5) | 0.0152 (4) | −0.0009 (4) | 0.0018 (4) | −0.0037 (4) |
N2 | 0.0153 (4) | 0.0266 (5) | 0.0152 (4) | −0.0008 (4) | 0.0015 (3) | −0.0061 (4) |
C11 | 0.0160 (4) | 0.0231 (5) | 0.0147 (4) | −0.0007 (4) | 0.0030 (4) | −0.0051 (4) |
C12 | 0.0247 (6) | 0.0317 (6) | 0.0185 (5) | −0.0009 (5) | 0.0023 (4) | 0.0000 (4) |
C13 | 0.0408 (8) | 0.0571 (10) | 0.0173 (6) | −0.0037 (7) | −0.0037 (5) | −0.0014 (6) |
C14 | 0.0391 (8) | 0.0612 (11) | 0.0243 (6) | −0.0127 (8) | 0.0002 (6) | −0.0189 (7) |
C15 | 0.0315 (7) | 0.0355 (7) | 0.0350 (7) | −0.0098 (6) | 0.0080 (5) | −0.0185 (6) |
C16 | 0.0225 (5) | 0.0246 (6) | 0.0236 (5) | −0.0020 (4) | 0.0070 (4) | −0.0059 (4) |
C21 | 0.0185 (5) | 0.0235 (5) | 0.0151 (4) | −0.0003 (4) | −0.0005 (4) | −0.0049 (4) |
C22 | 0.0358 (7) | 0.0330 (7) | 0.0168 (5) | −0.0123 (5) | 0.0015 (5) | −0.0041 (5) |
C23 | 0.0446 (8) | 0.0414 (8) | 0.0156 (5) | −0.0123 (7) | 0.0041 (5) | −0.0064 (5) |
C24 | 0.0341 (7) | 0.0410 (8) | 0.0222 (6) | −0.0079 (6) | −0.0016 (5) | −0.0123 (5) |
C25 | 0.0265 (6) | 0.0382 (8) | 0.0300 (6) | −0.0108 (5) | 0.0027 (5) | −0.0129 (6) |
C26 | 0.0206 (5) | 0.0305 (6) | 0.0229 (5) | −0.0044 (5) | 0.0038 (4) | −0.0076 (5) |
S1—C2 | 1.6766 (12) | C13—H13 | 0.9500 |
Cl1—C12 | 1.7313 (15) | C14—C15 | 1.385 (3) |
Cl2—C16 | 1.7386 (14) | C14—H14 | 0.9500 |
Cl3—C23 | 1.7433 (15) | C15—C16 | 1.3951 (18) |
C1—O1 | 1.2209 (14) | C15—H15 | 0.9500 |
C1—N1 | 1.3721 (14) | C21—C26 | 1.3912 (18) |
C1—C11 | 1.5128 (15) | C21—C22 | 1.3925 (18) |
N1—C2 | 1.3980 (14) | C22—C23 | 1.3912 (18) |
N1—H1 | 0.86 (2) | C22—H22 | 0.9500 |
C2—N2 | 1.3423 (14) | C23—C24 | 1.389 (2) |
N2—C21 | 1.4360 (14) | C24—C25 | 1.390 (2) |
N2—H2 | 0.82 (2) | C24—H24 | 0.9500 |
C11—C12 | 1.3957 (17) | C25—C26 | 1.3947 (17) |
C11—C16 | 1.3957 (17) | C25—H25 | 0.9500 |
C12—C13 | 1.3971 (19) | C26—H26 | 0.9500 |
C13—C14 | 1.385 (3) | ||
O1—C1—N1 | 124.03 (10) | C14—C15—C16 | 118.77 (14) |
O1—C1—C11 | 122.98 (10) | C14—C15—H15 | 120.6 |
N1—C1—C11 | 112.99 (9) | C16—C15—H15 | 120.6 |
C1—N1—C2 | 128.90 (10) | C15—C16—C11 | 121.96 (13) |
C1—N1—H1 | 116.6 (13) | C15—C16—Cl2 | 118.99 (11) |
C2—N1—H1 | 114.5 (13) | C11—C16—Cl2 | 119.05 (9) |
N2—C2—N1 | 116.98 (10) | C26—C21—C22 | 120.68 (11) |
N2—C2—S1 | 125.50 (9) | C26—C21—N2 | 118.43 (11) |
N1—C2—S1 | 117.52 (8) | C22—C21—N2 | 120.88 (11) |
C2—N2—C21 | 124.95 (10) | C23—C22—C21 | 118.48 (13) |
C2—N2—H2 | 117.2 (14) | C23—C22—H22 | 120.8 |
C21—N2—H2 | 117.5 (14) | C21—C22—H22 | 120.8 |
C12—C11—C16 | 117.79 (11) | C24—C23—C22 | 121.91 (13) |
C12—C11—C1 | 120.90 (11) | C24—C23—Cl3 | 119.18 (10) |
C16—C11—C1 | 121.31 (11) | C22—C23—Cl3 | 118.89 (12) |
C11—C12—C13 | 121.04 (14) | C23—C24—C25 | 118.67 (12) |
C11—C12—Cl1 | 119.67 (10) | C23—C24—H24 | 120.7 |
C13—C12—Cl1 | 119.28 (12) | C25—C24—H24 | 120.7 |
C14—C13—C12 | 119.59 (15) | C24—C25—C26 | 120.60 (13) |
C14—C13—H13 | 120.2 | C24—C25—H25 | 119.7 |
C12—C13—H13 | 120.2 | C26—C25—H25 | 119.7 |
C13—C14—C15 | 120.85 (13) | C21—C26—C25 | 119.62 (12) |
C13—C14—H14 | 119.6 | C21—C26—H26 | 120.2 |
C15—C14—H14 | 119.6 | C25—C26—H26 | 120.2 |
O1—C1—N1—C2 | 0.6 (2) | C14—C15—C16—C11 | 0.2 (2) |
C11—C1—N1—C2 | −179.35 (12) | C14—C15—C16—Cl2 | 179.98 (12) |
C1—N1—C2—N2 | −4.11 (19) | C12—C11—C16—C15 | −0.86 (18) |
C1—N1—C2—S1 | 175.27 (11) | C1—C11—C16—C15 | 178.74 (12) |
N1—C2—N2—C21 | 179.40 (11) | C12—C11—C16—Cl2 | 179.39 (9) |
S1—C2—N2—C21 | 0.07 (18) | C1—C11—C16—Cl2 | −1.01 (16) |
O1—C1—C11—C12 | −90.46 (16) | C2—N2—C21—C26 | −130.55 (14) |
N1—C1—C11—C12 | 89.48 (14) | C2—N2—C21—C22 | 50.86 (18) |
O1—C1—C11—C16 | 89.95 (16) | C26—C21—C22—C23 | 2.4 (2) |
N1—C1—C11—C16 | −90.11 (14) | N2—C21—C22—C23 | −179.07 (14) |
C16—C11—C12—C13 | 0.68 (19) | C21—C22—C23—C24 | −1.7 (3) |
C1—C11—C12—C13 | −178.93 (13) | C21—C22—C23—Cl3 | 176.96 (13) |
C16—C11—C12—Cl1 | 179.53 (10) | C22—C23—C24—C25 | −0.1 (3) |
C1—C11—C12—Cl1 | −0.07 (16) | Cl3—C23—C24—C25 | −178.76 (14) |
C11—C12—C13—C14 | 0.1 (2) | C23—C24—C25—C26 | 1.3 (3) |
Cl1—C12—C13—C14 | −178.73 (14) | C22—C21—C26—C25 | −1.2 (2) |
C12—C13—C14—C15 | −0.8 (3) | N2—C21—C26—C25 | −179.82 (13) |
C13—C14—C15—C16 | 0.6 (2) | C24—C25—C26—C21 | −0.6 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2···O1 | 0.82 (2) | 2.07 (2) | 2.7190 (13) | 136.0 (18) |
N2—H2···O1i | 0.82 (2) | 2.37 (2) | 3.0749 (14) | 145.5 (18) |
N1—H1···S1ii | 0.86 (2) | 2.47 (2) | 3.2974 (10) | 163.6 (18) |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x, −y+1, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C14H9Cl3N2OS |
Mr | 359.64 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 173 |
a, b, c (Å) | 10.6589 (5), 11.2114 (5), 13.2919 (6) |
β (°) | 99.942 (3) |
V (Å3) | 1564.55 (12) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.72 |
Crystal size (mm) | 0.47 × 0.47 × 0.45 |
Data collection | |
Diffractometer | Stoe IPDS-II two-circle diffractometer |
Absorption correction | Multi-scan (MULABS; Spek, 2003; Blessing, 1995) |
Tmin, Tmax | 0.729, 0.739 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 39690, 5066, 4674 |
Rint | 0.046 |
(sin θ/λ)max (Å−1) | 0.731 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.037, 0.094, 1.06 |
No. of reflections | 5066 |
No. of parameters | 199 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.65, −0.66 |
Computer programs: X-AREA (Stoe & Cie, 2001), SHELXS97 (Sheldrick, 2008), PLATON (Spek, 2003) and XP in SHELXTL-Plus (Sheldrick, 2008), PLATON (Spek, 2003) and SHELXL97 (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2···O1 | 0.82 (2) | 2.07 (2) | 2.7190 (13) | 136.0 (18) |
N2—H2···O1i | 0.82 (2) | 2.37 (2) | 3.0749 (14) | 145.5 (18) |
N1—H1···S1ii | 0.86 (2) | 2.47 (2) | 3.2974 (10) | 163.6 (18) |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x, −y+1, −z+1. |
Acknowledgements
MKR is grateful to the HEC-Pakistan for financial support for the PhD program under scholarship No. [ILC–0363104].
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The background to this study has been set out in our previous work on the structural chemistry of N,N'-disubstituted thioureas (Khawar Rauf et al., 2006a, 2007). Herein, as a continuation of these studies, the structure of the title compound, (I), is described.
In the structure of the title compound (Fig. 1), bond lengths and bond angles can be regarded as typical for N,N'-disubstituted thiourea compounds as found in the Cambridge Structural Database v5.28 (Allen, 2002) and some related structures (Khawar Rauf et al., 2006b). The molecule exists in the thione form with typical thiourea C—S and C—O bonds, as well as shortened C—N bonds. The thiocarbonyl and carbonyl groups are almost coplanar. The molecule features an intramolecular N—H···O hydrogen bond in the crystal structure. The molecules lying about inversions centers associate via N—H···S intermolecular hydrogen bonds to form dimers on one side and a similar association via N—H···O hydrogen bonding on the other side thus result in a sheet of molecules of (I) along the a<ι>-axis (Table 1; Fig. 2).