organic compounds
13-Hydroxy-4,16-dimethyl-4,16-diazapentacyclo[12.3.1.01,5.05,13.07,12]octadeca-7(12),8,10-triene-6,18-dione
aDepartment of Physics, The Madura College, Madurai 625 011, India, bSchool of Chemistry, Madurai Kamaraj University, Madurai 625 021, India, and cDepartment of Food Science and Technology, Faculty of Agriculture, University of Ruhuna, Mapalana, Kamburupitiya 81100, Sri Lanka
*Correspondence e-mail: nilanthalakshman@yahoo.co.uk
In the title compound, C18H20N2O3, the N-methylpiperidone ring adopts a chair conformation. The pyrrolidine ring and the five-membered cyclopentane rings adopt envelope conformations. The five-membered ring of the ninhydrin system adopts an with the central C atom deviating by 0.217 (1)Å from the mean plane through the other atoms. The molecular packing is characterized by intermolecular C—H⋯O and intramolecular C—H⋯O and O—H⋯N interactions.
Related literature
For the cytotoxic and anticancer properties of piperidinones, see: Dimmock et al. (1990, 2001). Piperidinone derivatives have attracted attention due to their predicted mode of interaction with cellular having little or no affinity for the hydroxy and amino groups found in see: Baluja et al. (1964); Mutus et al. (1989). Ninhydrin is used to monitor deprotection in solid phase peptide synthesis (Kaiser et al., 1970). For puckering parameters, see: Cremer & Pople (1975).
Experimental
Crystal data
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Refinement
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Data collection: CAD-4 EXPRESS (Enraf–Nonius, 1994); cell CAD-4 EXPRESS; data reduction: XCAD4 (Harms & Wocadlo, 1996); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: SHELXL97.
Supporting information
10.1107/S1600536809015293/at2770sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809015293/at2770Isup2.hkl
A mixture of 1-methyl-4-piperidinone 0.200 g (0.002 mol), ninhydrin 0.315 g (0.002 mol) and sarcosine 0.156 g (0.002 mol) in methanol (30 ml) were refluxed in a water bath for 10 h. After completion of the reaction as monitored by TLC, the excess solvent was removed under vacuum and the residue subjected to flash
using petroleum ether:ethyl acetate mixture (8:2 v/v) as to obtain crystals of title compound in 8% yield along with a other product. Yield: 8%, melting point: 435–436 K.The H atoms were placed in calculated positions and allowed to ride on their carrier atoms with C—H = 0.93–0.987 and Å, O—H = 0.82 Å. Uiso = 1.2Ueq(C) for CH, CH2 groups and Uiso = 1.5Ueq(C,O) for OH and CH3 groups.
Data collection: CAD-4 EXPRESS (Enraf–Nonius, 1994); cell
CAD-4 EXPRESS (Enraf–Nonius, 1994); data reduction: XCAD4 (Harms & Wocadlo, 1996); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).Fig. 1. The molecular structure of the title compound, showing 30% probability displacement ellipsoids and the atom-numbering scheme. | |
Fig. 2. Packing diagram viewed down the c axis. |
C18H20N2O3 | F(000) = 664 |
Mr = 312.36 | Dx = 1.315 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 25 reflections |
a = 11.0862 (5) Å | θ = 2–25° |
b = 11.6152 (5) Å | µ = 0.09 mm−1 |
c = 12.5670 (6) Å | T = 293 K |
β = 102.851 (9)° | Needle, colourless |
V = 1577.70 (12) Å3 | 0.18 × 0.13 × 0.11 mm |
Z = 4 |
Nonius MACH-3 diffractometer | 1978 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.046 |
Graphite monochromator | θmax = 25.0°, θmin = 2.2° |
ω–2θ scans | h = 0→13 |
Absorption correction: ψ scan (North et al., 1968) | k = −1→13 |
Tmin = 0.984, Tmax = 0.990 | l = −14→14 |
3226 measured reflections | 2 standard reflections every 60 min |
2764 independent reflections | intensity decay: none |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.039 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.120 | H-atom parameters constrained |
S = 1.04 | w = 1/[σ2(Fo2) + (0.0616P)2 + 0.2971P] where P = (Fo2 + 2Fc2)/3 |
2764 reflections | (Δ/σ)max < 0.001 |
211 parameters | Δρmax = 0.16 e Å−3 |
0 restraints | Δρmin = −0.18 e Å−3 |
C18H20N2O3 | V = 1577.70 (12) Å3 |
Mr = 312.36 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 11.0862 (5) Å | µ = 0.09 mm−1 |
b = 11.6152 (5) Å | T = 293 K |
c = 12.5670 (6) Å | 0.18 × 0.13 × 0.11 mm |
β = 102.851 (9)° |
Nonius MACH-3 diffractometer | 1978 reflections with I > 2σ(I) |
Absorption correction: ψ scan (North et al., 1968) | Rint = 0.046 |
Tmin = 0.984, Tmax = 0.990 | 2 standard reflections every 60 min |
3226 measured reflections | intensity decay: none |
2764 independent reflections |
R[F2 > 2σ(F2)] = 0.039 | 0 restraints |
wR(F2) = 0.120 | H-atom parameters constrained |
S = 1.04 | Δρmax = 0.16 e Å−3 |
2764 reflections | Δρmin = −0.18 e Å−3 |
211 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.37990 (16) | 0.05350 (16) | 0.64487 (16) | 0.0558 (5) | |
C2 | 0.25684 (15) | 0.03912 (14) | 0.56351 (16) | 0.0496 (4) | |
C3 | 0.15940 (16) | 0.06258 (15) | 0.63055 (15) | 0.0517 (4) | |
H3A | 0.0772 | 0.0460 | 0.5874 | 0.062* | |
H3B | 0.1744 | 0.0143 | 0.6951 | 0.062* | |
C4 | 0.39217 (16) | 0.18110 (16) | 0.66421 (15) | 0.0537 (5) | |
H4 | 0.4750 | 0.2026 | 0.7051 | 0.064* | |
C5 | 0.29116 (17) | 0.21625 (17) | 0.72388 (14) | 0.0554 (5) | |
H5A | 0.3067 | 0.1796 | 0.7950 | 0.067* | |
H5B | 0.2935 | 0.2989 | 0.7349 | 0.067* | |
C6 | 0.36690 (14) | 0.22296 (15) | 0.54459 (15) | 0.0471 (4) | |
C7 | 0.26099 (14) | 0.14067 (15) | 0.48444 (13) | 0.0461 (4) | |
C8 | 0.14614 (15) | 0.21810 (16) | 0.45590 (13) | 0.0471 (4) | |
C9 | 0.18837 (16) | 0.33902 (15) | 0.47548 (14) | 0.0475 (4) | |
C10 | 0.31366 (16) | 0.34242 (15) | 0.52472 (14) | 0.0472 (4) | |
C11 | 0.37277 (19) | 0.44677 (16) | 0.54870 (16) | 0.0595 (5) | |
H11 | 0.4564 | 0.4498 | 0.5824 | 0.071* | |
C12 | 0.3053 (2) | 0.54695 (17) | 0.52175 (17) | 0.0680 (6) | |
H12 | 0.3445 | 0.6178 | 0.5363 | 0.082* | |
C13 | 0.1808 (2) | 0.54309 (18) | 0.47352 (17) | 0.0688 (6) | |
H13 | 0.1369 | 0.6114 | 0.4570 | 0.083* | |
C14 | 0.12088 (19) | 0.43966 (18) | 0.44954 (16) | 0.0602 (5) | |
H14 | 0.0370 | 0.4372 | 0.4167 | 0.072* | |
C15 | 0.24197 (18) | −0.07110 (18) | 0.49582 (19) | 0.0671 (6) | |
H15A | 0.3119 | −0.1222 | 0.5203 | 0.080* | |
H15B | 0.1667 | −0.1113 | 0.5006 | 0.080* | |
C16 | 0.2361 (2) | −0.0302 (2) | 0.3805 (2) | 0.0798 (7) | |
H16A | 0.2811 | −0.0824 | 0.3431 | 0.096* | |
H16B | 0.1509 | −0.0260 | 0.3397 | 0.096* | |
C17 | 0.2705 (2) | 0.1496 (2) | 0.28884 (17) | 0.0845 (7) | |
H17A | 0.1830 | 0.1563 | 0.2602 | 0.127* | |
H17B | 0.3075 | 0.1103 | 0.2369 | 0.127* | |
H17C | 0.3061 | 0.2249 | 0.3025 | 0.127* | |
C18 | 0.06767 (19) | 0.2233 (2) | 0.70672 (18) | 0.0693 (6) | |
H18A | −0.0089 | 0.2123 | 0.6544 | 0.104* | |
H18B | 0.0787 | 0.3036 | 0.7240 | 0.104* | |
H18C | 0.0660 | 0.1808 | 0.7719 | 0.104* | |
N1 | 0.16914 (13) | 0.18280 (12) | 0.66132 (11) | 0.0479 (4) | |
N2 | 0.29314 (14) | 0.08429 (15) | 0.39070 (13) | 0.0603 (4) | |
O1 | 0.04209 (10) | 0.18577 (12) | 0.41422 (11) | 0.0618 (4) | |
O2 | 0.47670 (10) | 0.20956 (13) | 0.50608 (13) | 0.0650 (4) | |
H2 | 0.4673 | 0.1578 | 0.4606 | 0.098* | |
O3 | 0.45072 (13) | −0.02185 (13) | 0.68415 (14) | 0.0810 (5) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0474 (10) | 0.0498 (11) | 0.0671 (12) | 0.0042 (8) | 0.0059 (9) | 0.0104 (9) |
C2 | 0.0446 (9) | 0.0392 (9) | 0.0636 (11) | −0.0012 (7) | 0.0093 (8) | −0.0055 (8) |
C3 | 0.0506 (10) | 0.0463 (10) | 0.0576 (11) | −0.0046 (8) | 0.0110 (8) | 0.0019 (8) |
C4 | 0.0431 (9) | 0.0535 (11) | 0.0569 (11) | −0.0048 (8) | −0.0055 (8) | 0.0016 (9) |
C5 | 0.0653 (11) | 0.0536 (11) | 0.0430 (9) | −0.0058 (9) | 0.0026 (8) | 0.0004 (8) |
C6 | 0.0342 (8) | 0.0477 (10) | 0.0585 (10) | −0.0011 (7) | 0.0082 (7) | 0.0006 (8) |
C7 | 0.0390 (9) | 0.0495 (10) | 0.0493 (10) | −0.0009 (7) | 0.0089 (7) | −0.0065 (8) |
C8 | 0.0395 (9) | 0.0594 (11) | 0.0416 (9) | 0.0023 (8) | 0.0073 (7) | 0.0001 (8) |
C9 | 0.0505 (10) | 0.0509 (10) | 0.0434 (9) | 0.0056 (8) | 0.0150 (7) | 0.0053 (8) |
C10 | 0.0504 (10) | 0.0472 (10) | 0.0463 (9) | −0.0013 (8) | 0.0155 (8) | 0.0038 (8) |
C11 | 0.0648 (12) | 0.0516 (12) | 0.0635 (12) | −0.0107 (9) | 0.0171 (9) | 0.0023 (9) |
C12 | 0.0982 (17) | 0.0463 (12) | 0.0655 (13) | −0.0053 (11) | 0.0311 (12) | 0.0055 (10) |
C13 | 0.0958 (17) | 0.0522 (13) | 0.0640 (13) | 0.0185 (11) | 0.0300 (12) | 0.0143 (10) |
C14 | 0.0639 (12) | 0.0639 (13) | 0.0544 (11) | 0.0184 (10) | 0.0168 (9) | 0.0104 (9) |
C15 | 0.0553 (11) | 0.0494 (11) | 0.0965 (16) | −0.0015 (9) | 0.0170 (11) | −0.0161 (11) |
C16 | 0.0767 (15) | 0.0750 (16) | 0.0899 (17) | −0.0090 (11) | 0.0229 (12) | −0.0364 (13) |
C17 | 0.0865 (16) | 0.117 (2) | 0.0548 (13) | 0.0058 (14) | 0.0251 (11) | −0.0107 (13) |
C18 | 0.0730 (13) | 0.0697 (14) | 0.0681 (13) | 0.0075 (11) | 0.0222 (10) | −0.0097 (11) |
N1 | 0.0508 (8) | 0.0466 (8) | 0.0461 (8) | −0.0003 (6) | 0.0105 (6) | −0.0013 (6) |
N2 | 0.0567 (9) | 0.0692 (11) | 0.0584 (10) | 0.0002 (8) | 0.0201 (7) | −0.0161 (8) |
O1 | 0.0403 (7) | 0.0767 (10) | 0.0626 (8) | −0.0001 (6) | −0.0011 (6) | −0.0024 (7) |
O2 | 0.0405 (7) | 0.0683 (10) | 0.0891 (11) | −0.0026 (6) | 0.0207 (6) | −0.0079 (8) |
O3 | 0.0642 (9) | 0.0617 (9) | 0.1068 (13) | 0.0116 (7) | −0.0029 (8) | 0.0202 (8) |
C1—O3 | 1.206 (2) | C10—C11 | 1.379 (3) |
C1—C4 | 1.503 (3) | C11—C12 | 1.384 (3) |
C1—C2 | 1.521 (2) | C11—H11 | 0.9300 |
C2—C15 | 1.526 (3) | C12—C13 | 1.379 (3) |
C2—C3 | 1.535 (3) | C12—H12 | 0.9300 |
C2—C7 | 1.549 (3) | C13—C14 | 1.374 (3) |
C3—N1 | 1.446 (2) | C13—H13 | 0.9300 |
C3—H3A | 0.9700 | C14—H14 | 0.9300 |
C3—H3B | 0.9700 | C15—C16 | 1.513 (3) |
C4—C5 | 1.535 (3) | C15—H15A | 0.9700 |
C4—C6 | 1.545 (3) | C15—H15B | 0.9700 |
C4—H4 | 0.9800 | C16—N2 | 1.466 (3) |
C5—N1 | 1.458 (2) | C16—H16A | 0.9700 |
C5—H5A | 0.9700 | C16—H16B | 0.9700 |
C5—H5B | 0.9700 | C17—N2 | 1.461 (3) |
C6—O2 | 1.415 (2) | C17—H17A | 0.9600 |
C6—C10 | 1.507 (2) | C17—H17B | 0.9600 |
C6—C7 | 1.571 (2) | C17—H17C | 0.9600 |
C7—N2 | 1.460 (2) | C18—N1 | 1.448 (2) |
C7—C8 | 1.535 (2) | C18—H18A | 0.9600 |
C8—O1 | 1.2154 (19) | C18—H18B | 0.9600 |
C8—C9 | 1.484 (3) | C18—H18C | 0.9600 |
C9—C14 | 1.387 (3) | O2—H2 | 0.8200 |
C9—C10 | 1.390 (2) | ||
O3—C1—C4 | 128.48 (17) | C11—C10—C6 | 128.58 (16) |
O3—C1—C2 | 126.90 (18) | C9—C10—C6 | 111.31 (14) |
C4—C1—C2 | 104.62 (14) | C10—C11—C12 | 118.75 (19) |
C1—C2—C15 | 115.87 (15) | C10—C11—H11 | 120.6 |
C1—C2—C3 | 104.30 (15) | C12—C11—H11 | 120.6 |
C15—C2—C3 | 116.94 (15) | C13—C12—C11 | 120.90 (19) |
C1—C2—C7 | 101.38 (13) | C13—C12—H12 | 119.6 |
C15—C2—C7 | 107.23 (16) | C11—C12—H12 | 119.6 |
C3—C2—C7 | 109.99 (14) | C14—C13—C12 | 120.86 (19) |
N1—C3—C2 | 107.36 (14) | C14—C13—H13 | 119.6 |
N1—C3—H3A | 110.2 | C12—C13—H13 | 119.6 |
C2—C3—H3A | 110.2 | C13—C14—C9 | 118.43 (19) |
N1—C3—H3B | 110.2 | C13—C14—H14 | 120.8 |
C2—C3—H3B | 110.2 | C9—C14—H14 | 120.8 |
H3A—C3—H3B | 108.5 | C16—C15—C2 | 104.31 (17) |
C1—C4—C5 | 106.95 (15) | C16—C15—H15A | 110.9 |
C1—C4—C6 | 99.36 (15) | C2—C15—H15A | 110.9 |
C5—C4—C6 | 113.42 (14) | C16—C15—H15B | 110.9 |
C1—C4—H4 | 112.1 | C2—C15—H15B | 110.9 |
C5—C4—H4 | 112.1 | H15A—C15—H15B | 108.9 |
C6—C4—H4 | 112.1 | N2—C16—C15 | 105.95 (17) |
N1—C5—C4 | 110.85 (14) | N2—C16—H16A | 110.5 |
N1—C5—H5A | 109.5 | C15—C16—H16A | 110.5 |
C4—C5—H5A | 109.5 | N2—C16—H16B | 110.5 |
N1—C5—H5B | 109.5 | C15—C16—H16B | 110.5 |
C4—C5—H5B | 109.5 | H16A—C16—H16B | 108.7 |
H5A—C5—H5B | 108.1 | N2—C17—H17A | 109.5 |
O2—C6—C10 | 112.31 (14) | N2—C17—H17B | 109.5 |
O2—C6—C4 | 108.33 (14) | H17A—C17—H17B | 109.5 |
C10—C6—C4 | 115.51 (15) | N2—C17—H17C | 109.5 |
O2—C6—C7 | 112.10 (14) | H17A—C17—H17C | 109.5 |
C10—C6—C7 | 104.91 (13) | H17B—C17—H17C | 109.5 |
C4—C6—C7 | 103.35 (13) | N1—C18—H18A | 109.5 |
N2—C7—C8 | 114.40 (14) | N1—C18—H18B | 109.5 |
N2—C7—C2 | 102.91 (14) | H18A—C18—H18B | 109.5 |
C8—C7—C2 | 117.03 (14) | N1—C18—H18C | 109.5 |
N2—C7—C6 | 111.76 (13) | H18A—C18—H18C | 109.5 |
C8—C7—C6 | 104.37 (14) | H18B—C18—H18C | 109.5 |
C2—C7—C6 | 106.28 (13) | C3—N1—C18 | 113.60 (15) |
O1—C8—C9 | 126.74 (16) | C3—N1—C5 | 113.99 (14) |
O1—C8—C7 | 125.32 (17) | C18—N1—C5 | 114.19 (15) |
C9—C8—C7 | 107.53 (13) | C7—N2—C17 | 116.69 (17) |
C14—C9—C10 | 120.94 (17) | C7—N2—C16 | 107.45 (16) |
C14—C9—C8 | 128.68 (16) | C17—N2—C16 | 114.03 (18) |
C10—C9—C8 | 110.36 (14) | C6—O2—H2 | 109.5 |
C11—C10—C9 | 120.10 (17) | ||
O3—C1—C2—C15 | −22.8 (3) | C6—C7—C8—O1 | −175.36 (16) |
C4—C1—C2—C15 | 157.13 (17) | N2—C7—C8—C9 | −110.88 (16) |
O3—C1—C2—C3 | 107.2 (2) | C2—C7—C8—C9 | 128.67 (15) |
C4—C1—C2—C3 | −72.83 (18) | C6—C7—C8—C9 | 11.57 (17) |
O3—C1—C2—C7 | −138.5 (2) | O1—C8—C9—C14 | −1.2 (3) |
C4—C1—C2—C7 | 41.44 (18) | C7—C8—C9—C14 | 171.71 (17) |
C1—C2—C3—N1 | 66.97 (17) | O1—C8—C9—C10 | −179.96 (17) |
C15—C2—C3—N1 | −163.63 (15) | C7—C8—C9—C10 | −7.01 (19) |
C7—C2—C3—N1 | −41.05 (18) | C14—C9—C10—C11 | 0.1 (3) |
O3—C1—C4—C5 | −112.9 (2) | C8—C9—C10—C11 | 178.94 (16) |
C2—C1—C4—C5 | 67.20 (18) | C14—C9—C10—C6 | −179.82 (16) |
O3—C1—C4—C6 | 129.0 (2) | C8—C9—C10—C6 | −1.0 (2) |
C2—C1—C4—C6 | −50.92 (17) | O2—C6—C10—C11 | −49.6 (2) |
C1—C4—C5—N1 | −56.50 (19) | C4—C6—C10—C11 | 75.3 (2) |
C6—C4—C5—N1 | 52.0 (2) | C7—C6—C10—C11 | −171.64 (18) |
C1—C4—C6—O2 | −80.09 (16) | O2—C6—C10—C9 | 130.29 (15) |
C5—C4—C6—O2 | 166.74 (14) | C4—C6—C10—C9 | −104.79 (17) |
C1—C4—C6—C10 | 152.95 (14) | C7—C6—C10—C9 | 8.28 (18) |
C5—C4—C6—C10 | 39.8 (2) | C9—C10—C11—C12 | −0.7 (3) |
C1—C4—C6—C7 | 38.98 (16) | C6—C10—C11—C12 | 179.21 (17) |
C5—C4—C6—C7 | −74.19 (17) | C10—C11—C12—C13 | 1.1 (3) |
C1—C2—C7—N2 | 102.34 (15) | C11—C12—C13—C14 | −0.9 (3) |
C15—C2—C7—N2 | −19.57 (17) | C12—C13—C14—C9 | 0.3 (3) |
C3—C2—C7—N2 | −147.71 (14) | C10—C9—C14—C13 | 0.1 (3) |
C1—C2—C7—C8 | −131.31 (15) | C8—C9—C14—C13 | −178.51 (17) |
C15—C2—C7—C8 | 106.79 (17) | C1—C2—C15—C16 | −113.14 (18) |
C3—C2—C7—C8 | −21.4 (2) | C3—C2—C15—C16 | 123.18 (18) |
C1—C2—C7—C6 | −15.26 (17) | C7—C2—C15—C16 | −0.81 (19) |
C15—C2—C7—C6 | −137.16 (14) | C2—C15—C16—N2 | 21.1 (2) |
C3—C2—C7—C6 | 94.70 (15) | C2—C3—N1—C18 | 168.67 (15) |
O2—C6—C7—N2 | −9.8 (2) | C2—C3—N1—C5 | −58.18 (19) |
C10—C6—C7—N2 | 112.33 (16) | C4—C5—N1—C3 | 53.1 (2) |
C4—C6—C7—N2 | −126.26 (15) | C4—C5—N1—C18 | −174.04 (16) |
O2—C6—C7—C8 | −133.98 (15) | C8—C7—N2—C17 | 35.0 (2) |
C10—C6—C7—C8 | −11.83 (17) | C2—C7—N2—C17 | 163.01 (16) |
C4—C6—C7—C8 | 109.58 (15) | C6—C7—N2—C17 | −83.3 (2) |
O2—C6—C7—C2 | 101.72 (16) | C8—C7—N2—C16 | −94.49 (19) |
C10—C6—C7—C2 | −136.13 (14) | C2—C7—N2—C16 | 33.53 (18) |
C4—C6—C7—C2 | −14.72 (16) | C6—C7—N2—C16 | 147.18 (16) |
N2—C7—C8—O1 | 62.2 (2) | C15—C16—N2—C7 | −35.3 (2) |
C2—C7—C8—O1 | −58.3 (2) | C15—C16—N2—C17 | −166.26 (17) |
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H2···N2 | 0.82 | 2.12 | 2.655 (2) | 123 |
C15—H15A···O3 | 0.97 | 2.56 | 2.974 (3) | 106 |
C18—H18B···O3i | 0.96 | 2.39 | 3.288 (3) | 155 |
Symmetry code: (i) −x+1/2, y+1/2, −z+3/2. |
Experimental details
Crystal data | |
Chemical formula | C18H20N2O3 |
Mr | 312.36 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 293 |
a, b, c (Å) | 11.0862 (5), 11.6152 (5), 12.5670 (6) |
β (°) | 102.851 (9) |
V (Å3) | 1577.70 (12) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.09 |
Crystal size (mm) | 0.18 × 0.13 × 0.11 |
Data collection | |
Diffractometer | Nonius MACH-3 diffractometer |
Absorption correction | ψ scan (North et al., 1968) |
Tmin, Tmax | 0.984, 0.990 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 3226, 2764, 1978 |
Rint | 0.046 |
(sin θ/λ)max (Å−1) | 0.594 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.039, 0.120, 1.04 |
No. of reflections | 2764 |
No. of parameters | 211 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.16, −0.18 |
Computer programs: CAD-4 EXPRESS (Enraf–Nonius, 1994), XCAD4 (Harms & Wocadlo, 1996), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H2···N2 | 0.82 | 2.12 | 2.655 (2) | 123 |
C15—H15A···O3 | 0.97 | 2.56 | 2.974 (3) | 106 |
C18—H18B···O3i | 0.96 | 2.39 | 3.288 (3) | 155 |
Symmetry code: (i) −x+1/2, y+1/2, −z+3/2. |
Acknowledgements
JS and SG thank the Management of The Madura College, Madurai, for their constant support.
References
Baluja, G., Municio, A. M. & Vega, S. (1964). Chem. Ind. pp. 2053–2054. Google Scholar
Cremer, D. & Pople, J. A. (1975). J. Am. Chem. Soc. 97, 1354–1358. CrossRef CAS Web of Science Google Scholar
Dimmock, J. R., Arora, V. K., Wonko, S. L., Hamon, N. W., Quail, J. W., Jia, Z., Warrington, R. C., Fang, W. D. & Lee, J. S. (1990). Drug. Des. Deliv. 6, 183–194. CAS PubMed Google Scholar
Dimmock, J. R., Padmanilayam, M. P., Puthucode, R. N., Nazarali, A. J., Motaganahalli, N. L., Zello, G. A., Quail, J. W., Oloo, E. O., Kraatz, H. B., Prisciak, J. S., Allen, T. M., Santos, C. L., Balsarini, J., Clercq, E. D. & Manavathu, E. K. (2001). J. Med. Chem. 44, 586–593. Web of Science CSD CrossRef PubMed CAS Google Scholar
Enraf–Nonius (1994). CAD-4 EXPRESS. Enraf–Nonius, Delft, The Netherlands. Google Scholar
Harms, K. & Wocadlo, S. (1996). XCAD4. University of Marburg, Germany. Google Scholar
Kaiser, E., Colescott, R. L., Bossinger, C. D. & Cook, P. I. (1970). Anal. Biochem. 34, 595–598. CrossRef CAS PubMed Web of Science Google Scholar
Mutus, B., Wagner, J. D., Talpas, C. J., Dimmock, J. R., Phillips, O. A. & Reid, R. S. (1989). Anal. Biochem. 177, 237–243. CrossRef CAS PubMed Web of Science Google Scholar
North, A. C. T., Phillips, D. C. & Mathews, F. S. (1968). Acta Cryst. A24, 351–359. CrossRef IUCr Journals Web of Science Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Spek, A. L. (2009). Acta Cryst. D65, 148–155. Web of Science CrossRef CAS IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Piperidinones belong to an important class of heterocycles which are found to possess a variety of biological activities, including cytotoxic and anticancer properties (Dimmock et al., 1990, 2001). Derivatives of piperidinones have also attracted wide attention from chemists and biologists due to their predicted mode of interaction with cellular thiols, having little or no affinity for the hydroxy and amino groups found in nucleic acids (Baluja et al., 1964; Mutus et al., 1989). Ninhydrin is used to monitor deprotection in solid phase peptide synthesis (Kaiser et al., 1970).
The molecular structure of the title compound is shown in Fig.1. The n-methyl piperidone ring adopts a chair conformation [Q=0.6668 (19) Å, θ= 13.62 (16)°, Φ= 152.0 (7)°; Cremer and Pople, 1975]. The pyrrolidine ring A(N2—C16) and the five membered cyclopentane ring B(C1—C4) adopt envelope conformations [puckering parameters Q=0.327 (2) Å, Φ=178.8 (4)° and Q=0.483 (2) Å, Φ=162.3 (2)° respectively, Cremer and Pople, 1975]. In the ninhydrin system, in the five membered ring the flap atom C7 deviate from the mean plane formed by other atoms C6/C8/C9/C10/C11/C12/C13/C14 by 0.217 (1)Å adopting an envelope conformation. The sum of the angle at the atom N2 is 338.17 (2)° is in accordance with sp3 hybridization.
Fig. 2 shows the packing viewed down the c—axis. The molecular interaction through C—H···O (Table 1) hydrogen bonds, generating a graph set motif of C11(7) along the b—axis, stabilize the crystal structure. There are neither a marked C—H···π nor π···π interactions in the structure.