organic compounds
3′-Benzyloxy-3-hydroxy-3,3′-bi-1H-indole-2,2′(3H,3′H)-dione monohydrate
aDepartment of Physics, Presidency College (Autonomous), Chennai 600 005, India, bCentre of Advanced Study in Crystallography and Biophysics, University of Madras, Guindy Campus, Chennai 600 025, India, and cOrganic Chemistry Division, Central Leather Research Institute, Adyar, Chennai 600 020, India
*Correspondence e-mail: mnpsy2004@yahoo.com
In the title compound, C23H18N2O4·H2O, the two oxindole rings subtend a dihedral angle of 54.29 (5)°. The is stabilized by intermolecular N—H⋯O, O—H⋯O and C—H⋯π interactions.
Related literature
For the biological activity and pharmaceutical applications of indole derivatives, see: Harris & Uhle (1960); Ho et al. (1986); Rajeswaran et al. (1999); Stevenson et al. (2000). For description of hydrogen-bond motifs, see Bernstein et al. (1995).
Experimental
Crystal data
|
Refinement
|
Data collection: APEX2 (Bruker, 2004); cell SAINT (Bruker, 2004); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009).
Supporting information
10.1107/S1600536809012380/bt2889sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809012380/bt2889Isup2.hkl
To a refluxing solution of isatin (1 equivalent), Rh2(OAC)4 (0.01 equivalent) in dichloromethane, benzyl alcohol (1.2 equivalent) was added. After five minutes, 3-diazo-1,3-dihydro-indol-2-one in dichloromethane was added dropwise through a syringe pump. The reaction mixture was allowed to stir at 60°C for half-an-hour. The solid formed in the reaction was filtered and washed with methanol to obtain the pure product. The compound was recrystallized in ethanol.
H atoms bonded to nitrogen and oxygen H atoms were freely refined. H atoms bonded to carbon were positioned geometrically (C—H=0.93–0.97 Å) and allowed to ride on their parent atoms with 1.2Ueq(C).
Data collection: APEX2 (Bruker, 2004); cell
SAINT (Bruker, 2004); data reduction: SAINT (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008) and PLATON (Spek, 2009).Fig. 1. Perspective view of the molecule with displacement ellipsoids drawn at the 50% probability level. The H atoms are shown as small circles of arbitrary radii. | |
Fig. 2. The crystal packing of the molecules viewed down c axis. H atoms not involved in hydrogen bonding have been omitted for clarity. |
C23H18N2O4·H2O | Z = 2 |
Mr = 404.41 | F(000) = 424 |
Triclinic, P1 | Dx = 1.418 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 9.8243 (3) Å | Cell parameters from 4635 reflections |
b = 9.9304 (6) Å | θ = 2.1–25.0° |
c = 11.4460 (5) Å | µ = 0.10 mm−1 |
α = 107.517 (2)° | T = 293 K |
β = 114.227 (3)° | Block, colourless |
γ = 93.918 (2)° | 0.28 × 0.25 × 0.20 mm |
V = 947.17 (8) Å3 |
Bruker Kappa APEXII area-detector diffractometer | 3335 independent reflections |
Radiation source: fine-focus sealed tube | 3045 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.021 |
ω and ϕ scans | θmax = 25.0°, θmin = 2.1° |
Absorption correction: multi-scan (SADABS; Sheldrick, 2001) | h = −11→11 |
Tmin = 0.972, Tmax = 0.980 | k = −11→11 |
16894 measured reflections | l = −13→13 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.032 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.084 | w = 1/[σ2(Fo2) + (0.038P)2 + 0.3004P] where P = (Fo2 + 2Fc2)/3 |
S = 1.05 | (Δ/σ)max = 0.003 |
3335 reflections | Δρmax = 0.23 e Å−3 |
292 parameters | Δρmin = −0.18 e Å−3 |
0 restraints | Extinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.038 (3) |
C23H18N2O4·H2O | γ = 93.918 (2)° |
Mr = 404.41 | V = 947.17 (8) Å3 |
Triclinic, P1 | Z = 2 |
a = 9.8243 (3) Å | Mo Kα radiation |
b = 9.9304 (6) Å | µ = 0.10 mm−1 |
c = 11.4460 (5) Å | T = 293 K |
α = 107.517 (2)° | 0.28 × 0.25 × 0.20 mm |
β = 114.227 (3)° |
Bruker Kappa APEXII area-detector diffractometer | 3335 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 2001) | 3045 reflections with I > 2σ(I) |
Tmin = 0.972, Tmax = 0.980 | Rint = 0.021 |
16894 measured reflections |
R[F2 > 2σ(F2)] = 0.032 | 0 restraints |
wR(F2) = 0.084 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.05 | Δρmax = 0.23 e Å−3 |
3335 reflections | Δρmin = −0.18 e Å−3 |
292 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.33868 (11) | 0.37105 (9) | 0.58225 (10) | 0.0399 (2) | |
O2 | 0.38716 (10) | 0.07924 (10) | 0.53420 (9) | 0.0335 (2) | |
H2 | 0.381 (2) | −0.018 (2) | 0.504 (2) | 0.070 (6)* | |
O3 | 0.61939 (10) | 0.21310 (10) | 0.48237 (10) | 0.0374 (2) | |
O4 | 0.33920 (10) | 0.00510 (8) | 0.25071 (9) | 0.0302 (2) | |
O5 | 0.09912 (16) | −0.40448 (16) | −0.55511 (16) | 0.0632 (3) | |
H5B | 0.183 (4) | −0.346 (3) | −0.552 (3) | 0.129 (10)* | |
H5A | 0.064 (4) | −0.482 (4) | −0.622 (3) | 0.135 (12)* | |
N1 | 0.09503 (13) | 0.23295 (12) | 0.47470 (12) | 0.0349 (3) | |
H1 | 0.0522 (19) | 0.2945 (18) | 0.5098 (17) | 0.048 (4)* | |
C2 | 0.02036 (14) | 0.08934 (14) | 0.38791 (13) | 0.0320 (3) | |
C3 | −0.12940 (15) | 0.02332 (17) | 0.34058 (15) | 0.0435 (3) | |
H3 | −0.1961 | 0.0735 | 0.3647 | 0.052* | |
C4 | −0.17671 (17) | −0.12064 (19) | 0.25573 (16) | 0.0520 (4) | |
H4 | −0.2777 | −0.1681 | 0.2211 | 0.062* | |
C5 | −0.07767 (19) | −0.19539 (17) | 0.22128 (17) | 0.0521 (4) | |
H5 | −0.1129 | −0.2921 | 0.1632 | 0.062* | |
C6 | 0.07409 (17) | −0.12838 (15) | 0.27202 (14) | 0.0407 (3) | |
H6 | 0.1416 | −0.1794 | 0.2502 | 0.049* | |
C7 | 0.12222 (14) | 0.01554 (13) | 0.35540 (12) | 0.0288 (3) | |
C8 | 0.27766 (13) | 0.11694 (12) | 0.43061 (12) | 0.0262 (3) | |
C9 | 0.24378 (14) | 0.25831 (13) | 0.50590 (12) | 0.0286 (3) | |
C10 | 0.33824 (13) | 0.14368 (12) | 0.33172 (12) | 0.0255 (3) | |
C11 | 0.50226 (13) | 0.24303 (12) | 0.41187 (12) | 0.0273 (3) | |
N12 | 0.49318 (12) | 0.36457 (11) | 0.38326 (11) | 0.0305 (2) | |
H12 | 0.5721 (18) | 0.4358 (17) | 0.4159 (16) | 0.042 (4)* | |
C13 | 0.34446 (14) | 0.36220 (13) | 0.29098 (12) | 0.0289 (3) | |
C14 | 0.29438 (16) | 0.46934 (14) | 0.24218 (14) | 0.0382 (3) | |
H14 | 0.3602 | 0.5570 | 0.2701 | 0.046* | |
C15 | 0.14143 (18) | 0.44063 (16) | 0.14958 (15) | 0.0448 (4) | |
H15 | 0.1036 | 0.5108 | 0.1147 | 0.054* | |
C16 | 0.04399 (16) | 0.31071 (17) | 0.10790 (15) | 0.0443 (4) | |
H16 | −0.0580 | 0.2940 | 0.0447 | 0.053* | |
C17 | 0.09647 (15) | 0.20413 (15) | 0.15937 (13) | 0.0359 (3) | |
H17 | 0.0307 | 0.1164 | 0.1314 | 0.043* | |
C18 | 0.24816 (14) | 0.23153 (13) | 0.25278 (12) | 0.0277 (3) | |
C19 | 0.40617 (18) | 0.00789 (15) | 0.16166 (15) | 0.0418 (3) | |
H19A | 0.5160 | 0.0441 | 0.2151 | 0.050* | |
H19B | 0.3649 | 0.0719 | 0.1131 | 0.050* | |
C20 | 0.37193 (14) | −0.14144 (13) | 0.06125 (13) | 0.0315 (3) | |
C21 | 0.39451 (15) | −0.25784 (15) | 0.10387 (14) | 0.0370 (3) | |
H21 | 0.4291 | −0.2440 | 0.1963 | 0.044* | |
C22 | 0.36598 (19) | −0.39435 (16) | 0.00986 (17) | 0.0492 (4) | |
H22 | 0.3802 | −0.4725 | 0.0390 | 0.059* | |
C23 | 0.3165 (2) | −0.41584 (17) | −0.12678 (18) | 0.0573 (4) | |
H23 | 0.2985 | −0.5080 | −0.1897 | 0.069* | |
C24 | 0.2940 (2) | −0.30139 (19) | −0.16987 (16) | 0.0566 (4) | |
H24 | 0.2607 | −0.3157 | −0.2623 | 0.068* | |
C25 | 0.32036 (17) | −0.16459 (17) | −0.07653 (15) | 0.0440 (3) | |
H25 | 0.3033 | −0.0874 | −0.1067 | 0.053* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0466 (6) | 0.0270 (5) | 0.0427 (5) | 0.0014 (4) | 0.0243 (5) | 0.0037 (4) |
O2 | 0.0331 (5) | 0.0333 (5) | 0.0335 (5) | 0.0095 (4) | 0.0121 (4) | 0.0154 (4) |
O3 | 0.0245 (5) | 0.0340 (5) | 0.0483 (6) | 0.0061 (4) | 0.0110 (4) | 0.0158 (4) |
O4 | 0.0346 (5) | 0.0230 (4) | 0.0360 (5) | 0.0038 (3) | 0.0224 (4) | 0.0061 (4) |
O5 | 0.0581 (8) | 0.0594 (8) | 0.0800 (9) | 0.0163 (6) | 0.0439 (7) | 0.0168 (7) |
N1 | 0.0346 (6) | 0.0360 (6) | 0.0414 (6) | 0.0138 (5) | 0.0235 (5) | 0.0135 (5) |
C2 | 0.0298 (6) | 0.0400 (7) | 0.0316 (6) | 0.0074 (5) | 0.0149 (5) | 0.0187 (6) |
C3 | 0.0279 (7) | 0.0621 (9) | 0.0482 (8) | 0.0095 (6) | 0.0179 (6) | 0.0292 (7) |
C4 | 0.0302 (7) | 0.0672 (11) | 0.0510 (9) | −0.0090 (7) | 0.0111 (7) | 0.0258 (8) |
C5 | 0.0502 (9) | 0.0427 (8) | 0.0482 (9) | −0.0148 (7) | 0.0180 (7) | 0.0082 (7) |
C6 | 0.0428 (8) | 0.0333 (7) | 0.0433 (8) | −0.0011 (6) | 0.0219 (7) | 0.0089 (6) |
C7 | 0.0282 (6) | 0.0306 (6) | 0.0293 (6) | 0.0026 (5) | 0.0139 (5) | 0.0125 (5) |
C8 | 0.0256 (6) | 0.0250 (6) | 0.0283 (6) | 0.0057 (5) | 0.0123 (5) | 0.0096 (5) |
C9 | 0.0332 (7) | 0.0277 (6) | 0.0296 (6) | 0.0076 (5) | 0.0174 (5) | 0.0117 (5) |
C10 | 0.0247 (6) | 0.0217 (6) | 0.0288 (6) | 0.0041 (4) | 0.0132 (5) | 0.0064 (5) |
C11 | 0.0257 (6) | 0.0253 (6) | 0.0304 (6) | 0.0055 (5) | 0.0145 (5) | 0.0070 (5) |
N12 | 0.0265 (5) | 0.0251 (5) | 0.0359 (6) | 0.0003 (4) | 0.0123 (5) | 0.0096 (4) |
C13 | 0.0311 (6) | 0.0290 (6) | 0.0279 (6) | 0.0066 (5) | 0.0152 (5) | 0.0095 (5) |
C14 | 0.0458 (8) | 0.0319 (7) | 0.0389 (7) | 0.0085 (6) | 0.0185 (6) | 0.0164 (6) |
C15 | 0.0505 (9) | 0.0480 (8) | 0.0432 (8) | 0.0204 (7) | 0.0189 (7) | 0.0272 (7) |
C16 | 0.0328 (7) | 0.0612 (9) | 0.0389 (8) | 0.0134 (7) | 0.0110 (6) | 0.0247 (7) |
C17 | 0.0290 (7) | 0.0431 (7) | 0.0334 (7) | 0.0037 (6) | 0.0119 (5) | 0.0151 (6) |
C18 | 0.0289 (6) | 0.0293 (6) | 0.0269 (6) | 0.0061 (5) | 0.0152 (5) | 0.0092 (5) |
C19 | 0.0520 (8) | 0.0333 (7) | 0.0501 (8) | 0.0037 (6) | 0.0375 (7) | 0.0089 (6) |
C20 | 0.0287 (6) | 0.0326 (7) | 0.0353 (7) | 0.0053 (5) | 0.0194 (5) | 0.0084 (5) |
C21 | 0.0376 (7) | 0.0400 (7) | 0.0350 (7) | 0.0105 (6) | 0.0179 (6) | 0.0129 (6) |
C22 | 0.0611 (10) | 0.0361 (8) | 0.0614 (10) | 0.0175 (7) | 0.0380 (8) | 0.0161 (7) |
C23 | 0.0735 (11) | 0.0402 (8) | 0.0540 (10) | 0.0033 (8) | 0.0412 (9) | −0.0039 (7) |
C24 | 0.0673 (11) | 0.0638 (11) | 0.0328 (8) | 0.0027 (8) | 0.0273 (8) | 0.0056 (7) |
C25 | 0.0499 (9) | 0.0494 (8) | 0.0409 (8) | 0.0117 (7) | 0.0253 (7) | 0.0201 (7) |
O1—C9 | 1.2191 (15) | N12—C13 | 1.4016 (16) |
O2—C8 | 1.4066 (14) | N12—H12 | 0.877 (16) |
O2—H2 | 0.91 (2) | C13—C14 | 1.3747 (18) |
O3—C11 | 1.2218 (15) | C13—C18 | 1.3861 (17) |
O4—C10 | 1.4123 (14) | C14—C15 | 1.384 (2) |
O4—C19 | 1.4273 (15) | C14—H14 | 0.9300 |
O5—H5B | 0.96 (3) | C15—C16 | 1.376 (2) |
O5—H5A | 0.83 (3) | C15—H15 | 0.9300 |
N1—C9 | 1.3392 (17) | C16—C17 | 1.391 (2) |
N1—C2 | 1.4017 (17) | C16—H16 | 0.9300 |
N1—H1 | 0.860 (18) | C17—C18 | 1.3783 (18) |
C2—C3 | 1.3742 (19) | C17—H17 | 0.9300 |
C2—C7 | 1.3851 (18) | C19—C20 | 1.4906 (18) |
C3—C4 | 1.381 (2) | C19—H19A | 0.9700 |
C3—H3 | 0.9300 | C19—H19B | 0.9700 |
C4—C5 | 1.375 (2) | C20—C25 | 1.3808 (19) |
C4—H4 | 0.9300 | C20—C21 | 1.3816 (19) |
C5—C6 | 1.387 (2) | C21—C22 | 1.377 (2) |
C5—H5 | 0.9300 | C21—H21 | 0.9300 |
C6—C7 | 1.3759 (18) | C22—C23 | 1.374 (2) |
C6—H6 | 0.9300 | C22—H22 | 0.9300 |
C7—C8 | 1.5086 (16) | C23—C24 | 1.366 (3) |
C8—C9 | 1.5477 (16) | C23—H23 | 0.9300 |
C8—C10 | 1.5551 (16) | C24—C25 | 1.380 (2) |
C10—C18 | 1.5114 (17) | C24—H24 | 0.9300 |
C10—C11 | 1.5608 (16) | C25—H25 | 0.9300 |
C11—N12 | 1.3418 (16) | ||
C8—O2—H2 | 110.3 (12) | C13—N12—H12 | 123.8 (10) |
C10—O4—C19 | 113.84 (9) | C14—C13—C18 | 122.68 (12) |
H5B—O5—H5A | 112 (3) | C14—C13—N12 | 127.59 (12) |
C9—N1—C2 | 111.86 (11) | C18—C13—N12 | 109.73 (11) |
C9—N1—H1 | 124.2 (11) | C13—C14—C15 | 116.90 (13) |
C2—N1—H1 | 123.7 (11) | C13—C14—H14 | 121.5 |
C3—C2—C7 | 122.20 (13) | C15—C14—H14 | 121.5 |
C3—C2—N1 | 127.96 (13) | C16—C15—C14 | 121.59 (13) |
C7—C2—N1 | 109.82 (11) | C16—C15—H15 | 119.2 |
C2—C3—C4 | 117.24 (14) | C14—C15—H15 | 119.2 |
C2—C3—H3 | 121.4 | C15—C16—C17 | 120.67 (13) |
C4—C3—H3 | 121.4 | C15—C16—H16 | 119.7 |
C5—C4—C3 | 121.41 (13) | C17—C16—H16 | 119.7 |
C5—C4—H4 | 119.3 | C18—C17—C16 | 118.49 (12) |
C3—C4—H4 | 119.3 | C18—C17—H17 | 120.8 |
C4—C5—C6 | 120.82 (14) | C16—C17—H17 | 120.8 |
C4—C5—H5 | 119.6 | C17—C18—C13 | 119.65 (12) |
C6—C5—H5 | 119.6 | C17—C18—C10 | 131.70 (11) |
C7—C6—C5 | 118.33 (14) | C13—C18—C10 | 108.63 (10) |
C7—C6—H6 | 120.8 | O4—C19—C20 | 109.22 (10) |
C5—C6—H6 | 120.8 | O4—C19—H19A | 109.8 |
C6—C7—C2 | 119.98 (12) | C20—C19—H19A | 109.8 |
C6—C7—C8 | 131.53 (12) | O4—C19—H19B | 109.8 |
C2—C7—C8 | 108.41 (10) | C20—C19—H19B | 109.8 |
O2—C8—C7 | 114.09 (10) | H19A—C19—H19B | 108.3 |
O2—C8—C9 | 105.88 (9) | C25—C20—C21 | 118.92 (12) |
C7—C8—C9 | 101.76 (9) | C25—C20—C19 | 119.93 (13) |
O2—C8—C10 | 111.95 (9) | C21—C20—C19 | 121.13 (12) |
C7—C8—C10 | 112.73 (9) | C22—C21—C20 | 120.20 (13) |
C9—C8—C10 | 109.61 (9) | C22—C21—H21 | 119.9 |
O1—C9—N1 | 126.95 (12) | C20—C21—H21 | 119.9 |
O1—C9—C8 | 124.94 (11) | C23—C22—C21 | 120.39 (15) |
N1—C9—C8 | 108.10 (10) | C23—C22—H22 | 119.8 |
O4—C10—C18 | 115.50 (9) | C21—C22—H22 | 119.8 |
O4—C10—C8 | 105.35 (9) | C24—C23—C22 | 119.82 (14) |
C18—C10—C8 | 112.18 (9) | C24—C23—H23 | 120.1 |
O4—C10—C11 | 110.65 (9) | C22—C23—H23 | 120.1 |
C18—C10—C11 | 101.56 (9) | C23—C24—C25 | 120.11 (14) |
C8—C10—C11 | 111.77 (9) | C23—C24—H24 | 119.9 |
O3—C11—N12 | 125.87 (11) | C25—C24—H24 | 119.9 |
O3—C11—C10 | 126.42 (11) | C24—C25—C20 | 120.55 (14) |
N12—C11—C10 | 107.61 (10) | C24—C25—H25 | 119.7 |
C11—N12—C13 | 112.33 (10) | C20—C25—H25 | 119.7 |
C11—N12—H12 | 123.8 (10) | ||
C9—N1—C2—C3 | 176.59 (13) | O4—C10—C11—O3 | −50.44 (16) |
C9—N1—C2—C7 | −2.02 (15) | C18—C10—C11—O3 | −173.59 (12) |
C7—C2—C3—C4 | −1.4 (2) | C8—C10—C11—O3 | 66.64 (15) |
N1—C2—C3—C4 | −179.82 (13) | O4—C10—C11—N12 | 126.13 (10) |
C2—C3—C4—C5 | 0.7 (2) | C18—C10—C11—N12 | 2.99 (12) |
C3—C4—C5—C6 | 0.6 (2) | C8—C10—C11—N12 | −116.79 (11) |
C4—C5—C6—C7 | −1.3 (2) | O3—C11—N12—C13 | 175.33 (12) |
C5—C6—C7—C2 | 0.7 (2) | C10—C11—N12—C13 | −1.27 (13) |
C5—C6—C7—C8 | 177.20 (13) | C11—N12—C13—C14 | 178.62 (12) |
C3—C2—C7—C6 | 0.65 (19) | C11—N12—C13—C18 | −1.22 (14) |
N1—C2—C7—C6 | 179.35 (11) | C18—C13—C14—C15 | −1.10 (19) |
C3—C2—C7—C8 | −176.58 (11) | N12—C13—C14—C15 | 179.07 (12) |
N1—C2—C7—C8 | 2.12 (14) | C13—C14—C15—C16 | −0.2 (2) |
C6—C7—C8—O2 | −64.69 (17) | C14—C15—C16—C17 | 0.8 (2) |
C2—C7—C8—O2 | 112.10 (11) | C15—C16—C17—C18 | −0.1 (2) |
C6—C7—C8—C9 | −178.23 (13) | C16—C17—C18—C13 | −1.14 (19) |
C2—C7—C8—C9 | −1.44 (12) | C16—C17—C18—C10 | 176.85 (12) |
C6—C7—C8—C10 | 64.46 (17) | C14—C13—C18—C17 | 1.79 (19) |
C2—C7—C8—C10 | −118.75 (11) | N12—C13—C18—C17 | −178.35 (11) |
C2—N1—C9—O1 | −177.54 (12) | C14—C13—C18—C10 | −176.62 (11) |
C2—N1—C9—C8 | 1.01 (14) | N12—C13—C18—C10 | 3.23 (13) |
O2—C8—C9—O1 | 59.33 (15) | O4—C10—C18—C17 | 58.38 (17) |
C7—C8—C9—O1 | 178.85 (11) | C8—C10—C18—C17 | −62.37 (16) |
C10—C8—C9—O1 | −61.60 (15) | C11—C10—C18—C17 | 178.15 (13) |
O2—C8—C9—N1 | −119.26 (10) | O4—C10—C18—C13 | −123.47 (11) |
C7—C8—C9—N1 | 0.27 (12) | C8—C10—C18—C13 | 115.79 (11) |
C10—C8—C9—N1 | 119.82 (11) | C11—C10—C18—C13 | −3.70 (12) |
C19—O4—C10—C18 | 61.51 (14) | C10—O4—C19—C20 | −168.10 (10) |
C19—O4—C10—C8 | −174.11 (10) | O4—C19—C20—C25 | 133.58 (13) |
C19—O4—C10—C11 | −53.14 (13) | O4—C19—C20—C21 | −48.07 (17) |
O2—C8—C10—O4 | 73.14 (11) | C25—C20—C21—C22 | 0.1 (2) |
C7—C8—C10—O4 | −57.10 (12) | C19—C20—C21—C22 | −178.29 (13) |
C9—C8—C10—O4 | −169.68 (9) | C20—C21—C22—C23 | 0.7 (2) |
O2—C8—C10—C18 | −160.41 (9) | C21—C22—C23—C24 | −0.7 (3) |
C7—C8—C10—C18 | 69.34 (12) | C22—C23—C24—C25 | −0.1 (3) |
C9—C8—C10—C18 | −43.23 (13) | C23—C24—C25—C20 | 1.0 (3) |
O2—C8—C10—C11 | −47.09 (13) | C21—C20—C25—C24 | −0.9 (2) |
C7—C8—C10—C11 | −177.34 (9) | C19—C20—C25—C24 | 177.44 (14) |
C9—C8—C10—C11 | 70.09 (12) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O5i | 0.860 (18) | 2.045 (18) | 2.8858 (17) | 165.6 (15) |
O2—H2···O3ii | 0.91 (2) | 1.99 (2) | 2.8463 (13) | 155.9 (18) |
O2—H2···O2ii | 0.91 (2) | 2.57 (2) | 3.0274 (18) | 111.9 (14) |
O5—H5B···O3iii | 0.96 (3) | 1.97 (3) | 2.8969 (17) | 161 (3) |
N12—H12···O1iv | 0.877 (16) | 2.044 (16) | 2.8329 (14) | 149.2 (14) |
C17—H17···Cg3 | 0.93 | 3.15 | 3.8226 (17) | 131 |
C16—H16···Cg5i | 0.93 | 2.75 | 3.5140 (19) | 140 |
Symmetry codes: (i) −x, −y, −z; (ii) −x+1, −y, −z+1; (iii) −x+1, −y, −z; (iv) −x+1, −y+1, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C23H18N2O4·H2O |
Mr | 404.41 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 293 |
a, b, c (Å) | 9.8243 (3), 9.9304 (6), 11.4460 (5) |
α, β, γ (°) | 107.517 (2), 114.227 (3), 93.918 (2) |
V (Å3) | 947.17 (8) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.10 |
Crystal size (mm) | 0.28 × 0.25 × 0.20 |
Data collection | |
Diffractometer | Bruker Kappa APEXII area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 2001) |
Tmin, Tmax | 0.972, 0.980 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 16894, 3335, 3045 |
Rint | 0.021 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.032, 0.084, 1.05 |
No. of reflections | 3335 |
No. of parameters | 292 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.23, −0.18 |
Computer programs: APEX2 (Bruker, 2004), SAINT (Bruker, 2004), SHELXS97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997), SHELXL97 (Sheldrick, 2008) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O5i | 0.860 (18) | 2.045 (18) | 2.8858 (17) | 165.6 (15) |
O2—H2···O3ii | 0.91 (2) | 1.99 (2) | 2.8463 (13) | 155.9 (18) |
O2—H2···O2ii | 0.91 (2) | 2.57 (2) | 3.0274 (18) | 111.9 (14) |
O5—H5B···O3iii | 0.96 (3) | 1.97 (3) | 2.8969 (17) | 161 (3) |
N12—H12···O1iv | 0.877 (16) | 2.044 (16) | 2.8329 (14) | 149.2 (14) |
C17—H17···Cg3 | 0.93 | 3.1532 | 3.8226 (17) | 130.45 |
C16—H16···Cg5i | 0.93 | 2.7483 | 3.5140 (19) | 140.25 |
Symmetry codes: (i) −x, −y, −z; (ii) −x+1, −y, −z+1; (iii) −x+1, −y, −z; (iv) −x+1, −y+1, −z+1. |
Acknowledgements
PR thanks Dr Babu Varghese, SAIF, IIT-Madras, India, for his help with the data collection.
References
Bernstein, J., Davis, R. E., Shimoni, L. & Chang, N. L. (1995). Angew. Chem. Int. Ed. Engl. 34, 1555–1573. CrossRef CAS Web of Science Google Scholar
Bruker (2004). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565. CrossRef IUCr Journals Google Scholar
Harris, L. S. & Uhle, F. C. (1960). J. Pharmacol. Exp. Ther. 128, 353-363. Google Scholar
Ho, C. Y., Haegman, W. E. & Perisco, F. (1986). J. Med. Chem. 29, 118-121. Google Scholar
Rajeswaran, W. G., Labroo, R. B., Cohen, L. A. & King, M. M. (1999). J. Org. Chem. 64, 1369-1371. Web of Science CrossRef CAS Google Scholar
Sheldrick, G. M. (2001). SADABS. University of Göttingen, Germany. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Spek, A. L. (2009). Acta Cryst. D65, 148–155. Web of Science CrossRef CAS IUCr Journals Google Scholar
Stevenson, G. I., Smith, A. L., Lewis, S. G., Neduvelil, J. G., Patel, S., Marwood, R. & Castro, J. L. (2000). Bioorg. Med. Chem. Lett. 10, 2697-2704. Web of Science CrossRef PubMed CAS Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Indole derivatives are used as bioactive drugs (Stevenson et al., 2000) and they exibit anti-allergic, central nervous system depressant and muscle relaxant properties (Harris & Uhle 1960; Ho et al., 1986). Indoles have been proved to display high aldose reductase inhibitory activity (Rajeswaran et al., 1999). Against this background and to ascertain the molecular conformation, the structure determination of the title compound has been carried out.
The ORTEP plot of the molecule is shown in Fig. 1. The oxindole rings enclose a dihedral angle of 54.29 (5)°. In the benzene ring of the indole ring system, the endocyclic angels at C3 and C14 are contracted to 117.24 (25)° and 116.90 (14)°, while those at C2 and C13 are expanded to 122.20 (14)° and 122.69 (13)°, respectively. This would appear to be a real effect caused by the fusion of the pyrrole with benzene ring resulting in an angular distortion. The sum of the bond angles around the hetero nitrogen atom in the oxindole ring systems are equal to N1 [359.76 (11)°] and N12 [359.93 (10)°], is in accordance with the sp2 hybridization.
The packing of the molecules in the crystal structure is stabilized through N-H···O, O-H···O and C-H···π interactions. Atom N12 (x, y, z) donates a proton to O1 (-x+1, -y+1, -z+1) and forms a dimer with graph-set motif of R22(14) (Bernstein et al., 1995). The intermolecular N1-H1···O5 and O5-H5B···O3 hydrogen bonds form a one dimensional chain running along a-axis. The indole ring interacts with the other indole moiety through a weak intra C-H···π interaction involving atom C17, the separation between H17 and the centroid of the C2/C3/C4/C5/C6/C7 (Cg3) ring being 3.15Å.