metal-organic compounds
catena-Poly[[aquanickel(II)]-μ-pyridine-2,6-dicarboxylato-[aquanickel(II)]-μ-2,5-di-4-pyridyl-1,3,4-thiadiazole]
aLi Shui Vocational & Technical College, Lishui, Zhejiang 323000, People's Republic of China
*Correspondence e-mail: zjlszxa@126.com
The two independent NiII ions in the one-dimensional title complex, [Ni2(C7H3NO4)2(C12H8N4S)(H2O)2]n or [Ni2(pydc)2(bpt)(H2O)2]n (H2pydc = pyridine-2,6-dicarboxylic acid and bpt = 2,5-di-4-pyridyl-1,3,4-thiadiazole), have different coordination environments. One NiII ion is in a slightly-distorted octahedral coordination environment formed by three O atoms from two adjacent pydc ligands, two N atoms from bpt and pydc ligands, and one water molecule, while the other NiII ion is in distorted square-pyramidal geometry, coordinated by two O atoms from two carboxylate groups and two N atoms from the pyridine rings of the pydc and bpt ligands in the basal plane, while a coordinated water molecule occupies the apical site. In the the H atoms of both water molecules are involved in intermolecular hydrogen bonds with the O atoms of uncoordinated carboxylate groups, which link chains into a three-dimensional network.
Related literature
For information on the types of ligands used for metal-organic frameworks, see: Zhang et al. (2005); Wen et al. (2007); Dong et al. (2003).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2004); cell SMART (Bruker, 2004); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEPIII (Burnett & Johnson, 1996) and ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: SHELXL97.
Supporting information
10.1107/S1600536809012628/lh2797sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809012628/lh2797Isup2.hkl
A mixture of bpt (0.031 g, 0.15 mmol), NiSO4 (0.029 g, 0.13 mmol), and H2pydc (0.38g, 0.26mmol) in NaOH (0.2mL, 0.5M) and CH3CN(20 mL) solution, was stirred vigourously for 3 hours, and then then filtered. The resulting liquid was kept at room temperature and one week later single crystals suitable for X-ray diffraction measurements were formed.
The H atoms attached to C atoms were fixed geometrically and treated as riding with C—H = 0.93 Å with Uiso(H) = 1.2Ueq(C). The H atoms of water molecule were located in difference Fourier maps and refined in 'as found' positions with Uiso(H) = 1.5Ueq(O).
Data collection: APEX2 (Bruker, 2004); cell
SAINT (Bruker, 2004); data reduction: SAINT (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEPIII (Burnett & Johnson, 1996) and ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).[Ni2(C7H3NO4)2(C12H8N4S)(H2O)2] | Z = 2 |
Mr = 723.94 | F(000) = 736 |
Triclinic, P1 | Dx = 1.807 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 8.2998 (12) Å | Cell parameters from 4735 reflections |
b = 10.0819 (15) Å | θ = 2.3–25.2° |
c = 17.318 (3) Å | µ = 1.57 mm−1 |
α = 96.652 (2)° | T = 298 K |
β = 100.629 (2)° | Block, green |
γ = 108.077 (2)° | 0.28 × 0.21 × 0.15 mm |
V = 1330.6 (3) Å3 |
Bruker APEXII diffractometer | 4735 independent reflections |
Radiation source: fine-focus sealed tube | 3249 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.038 |
ϕ and ω scans | θmax = 25.2°, θmin = 2.3° |
Absorption correction: multi-scan (SADABS; Bruker, 2004) | h = −9→9 |
Tmin = 0.668, Tmax = 0.799 | k = −12→12 |
9932 measured reflections | l = −20→20 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.046 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.147 | H-atom parameters constrained |
S = 0.97 | w = 1/[σ2(Fo2) + (0.0901P)2] where P = (Fo2 + 2Fc2)/3 |
4735 reflections | (Δ/σ)max = 0.001 |
406 parameters | Δρmax = 0.43 e Å−3 |
0 restraints | Δρmin = −0.54 e Å−3 |
[Ni2(C7H3NO4)2(C12H8N4S)(H2O)2] | γ = 108.077 (2)° |
Mr = 723.94 | V = 1330.6 (3) Å3 |
Triclinic, P1 | Z = 2 |
a = 8.2998 (12) Å | Mo Kα radiation |
b = 10.0819 (15) Å | µ = 1.57 mm−1 |
c = 17.318 (3) Å | T = 298 K |
α = 96.652 (2)° | 0.28 × 0.21 × 0.15 mm |
β = 100.629 (2)° |
Bruker APEXII diffractometer | 4735 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2004) | 3249 reflections with I > 2σ(I) |
Tmin = 0.668, Tmax = 0.799 | Rint = 0.038 |
9932 measured reflections |
R[F2 > 2σ(F2)] = 0.046 | 0 restraints |
wR(F2) = 0.147 | H-atom parameters constrained |
S = 0.97 | Δρmax = 0.43 e Å−3 |
4735 reflections | Δρmin = −0.54 e Å−3 |
406 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Ni2 | 1.69956 (7) | 1.19003 (6) | 0.87739 (3) | 0.02962 (19) | |
Ni1 | −0.14341 (8) | 0.36762 (7) | 0.60834 (4) | 0.0429 (2) | |
S1 | 0.77693 (15) | 0.77425 (14) | 0.74915 (8) | 0.0431 (4) | |
O1 | 1.8982 (4) | 1.1719 (4) | 0.6830 (2) | 0.0488 (9) | |
O2 | 1.7107 (4) | 1.1265 (4) | 0.76286 (19) | 0.0402 (8) | |
O3 | 1.7748 (4) | 1.2547 (4) | 0.99695 (19) | 0.0403 (8) | |
O4 | 2.0135 (4) | 1.3775 (4) | 1.0943 (2) | 0.0455 (9) | |
O5 | −0.0806 (5) | 0.2964 (4) | 0.5084 (2) | 0.0594 (11) | |
O6 | −0.1988 (6) | 0.1538 (5) | 0.3893 (2) | 0.0734 (13) | |
O7 | −0.2846 (5) | 0.4040 (4) | 0.6856 (2) | 0.0475 (9) | |
O8 | −0.5522 (5) | 0.3199 (4) | 0.7064 (2) | 0.0547 (10) | |
O9 | 1.6629 (4) | 1.4007 (4) | 0.8577 (2) | 0.0427 (8) | |
H1W | 1.7581 | 1.4660 | 0.8704 | 0.064* | |
H2W | 1.6180 | 1.3885 | 0.8091 | 0.064* | |
O10 | −0.1970 (7) | 0.5901 (5) | 0.5634 (3) | 0.0955 (16) | |
H3W | −0.2039 | 0.6337 | 0.6070 | 0.143* | |
H4W | −0.1103 | 0.6361 | 0.5461 | 0.143* | |
N1 | 1.9442 (5) | 1.2626 (4) | 0.8884 (2) | 0.0321 (9) | |
N2 | −0.3695 (5) | 0.2512 (4) | 0.5473 (2) | 0.0406 (10) | |
N3 | 1.4516 (5) | 1.0892 (4) | 0.8666 (2) | 0.0340 (9) | |
N4 | 0.8221 (5) | 0.9038 (5) | 0.8903 (2) | 0.0449 (11) | |
N5 | 0.6470 (5) | 0.8299 (5) | 0.8649 (2) | 0.0442 (11) | |
N6 | 0.0871 (5) | 0.4965 (4) | 0.6684 (2) | 0.0390 (10) | |
C1 | 1.8619 (6) | 1.1791 (5) | 0.7489 (3) | 0.0339 (11) | |
C2 | 2.0073 (6) | 1.2550 (5) | 0.8231 (3) | 0.0323 (11) | |
C3 | 2.1824 (6) | 1.3118 (5) | 0.8283 (3) | 0.0372 (12) | |
H3 | 2.2270 | 1.3079 | 0.7830 | 0.045* | |
C4 | 2.2911 (6) | 1.3751 (6) | 0.9028 (3) | 0.0467 (14) | |
H4 | 2.4109 | 1.4131 | 0.9081 | 0.056* | |
C5 | 2.2227 (6) | 1.3823 (5) | 0.9695 (3) | 0.0435 (13) | |
H5 | 2.2954 | 1.4258 | 1.0197 | 0.052* | |
C6 | 2.0453 (6) | 1.3240 (5) | 0.9606 (3) | 0.0329 (11) | |
C7 | 1.9391 (6) | 1.3217 (5) | 1.0237 (3) | 0.0362 (11) | |
C8 | −0.2127 (8) | 0.2105 (6) | 0.4531 (3) | 0.0529 (15) | |
C9 | −0.3855 (7) | 0.1851 (6) | 0.4741 (3) | 0.0462 (13) | |
C10 | −0.5481 (7) | 0.1018 (6) | 0.4266 (3) | 0.0535 (15) | |
H10 | −0.5611 | 0.0541 | 0.3753 | 0.064* | |
C11 | −0.6908 (8) | 0.0937 (6) | 0.4600 (4) | 0.0584 (16) | |
H11 | −0.8022 | 0.0410 | 0.4296 | 0.070* | |
C12 | −0.6711 (7) | 0.1626 (6) | 0.5379 (3) | 0.0535 (15) | |
H12 | −0.7667 | 0.1554 | 0.5601 | 0.064* | |
C13 | −0.5039 (7) | 0.2415 (6) | 0.5803 (3) | 0.0427 (13) | |
C14 | −0.4484 (7) | 0.3255 (6) | 0.6637 (3) | 0.0420 (13) | |
C15 | 1.3472 (6) | 1.0279 (5) | 0.7932 (3) | 0.0370 (12) | |
H15 | 1.3966 | 1.0319 | 0.7491 | 0.044* | |
C16 | 1.1708 (6) | 0.9599 (5) | 0.7813 (3) | 0.0357 (11) | |
H16 | 1.1027 | 0.9185 | 0.7301 | 0.043* | |
C17 | 1.0954 (6) | 0.9536 (5) | 0.8465 (3) | 0.0304 (10) | |
C18 | 1.2028 (6) | 1.0150 (5) | 0.9222 (3) | 0.0347 (11) | |
H18 | 1.1568 | 1.0116 | 0.9672 | 0.042* | |
C19 | 1.3778 (6) | 1.0807 (5) | 0.9293 (3) | 0.0357 (11) | |
H19 | 1.4487 | 1.1214 | 0.9801 | 0.043* | |
C20 | 0.9077 (6) | 0.8850 (5) | 0.8354 (3) | 0.0323 (11) | |
C21 | 0.6026 (6) | 0.7566 (5) | 0.7930 (3) | 0.0328 (11) | |
C22 | 0.2237 (6) | 0.5116 (6) | 0.6344 (3) | 0.0460 (13) | |
H22 | 0.2044 | 0.4638 | 0.5825 | 0.055* | |
C23 | 0.3899 (7) | 0.5949 (6) | 0.6736 (3) | 0.0469 (14) | |
H23 | 0.4808 | 0.6017 | 0.6482 | 0.056* | |
C24 | 0.4242 (6) | 0.6691 (5) | 0.7506 (3) | 0.0343 (11) | |
C25 | 0.2834 (6) | 0.6548 (5) | 0.7860 (3) | 0.0388 (12) | |
H25 | 0.2995 | 0.7013 | 0.8379 | 0.047* | |
C26 | 0.1188 (6) | 0.5695 (5) | 0.7419 (3) | 0.0385 (12) | |
H26 | 0.0248 | 0.5629 | 0.7651 | 0.046* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Ni2 | 0.0176 (3) | 0.0381 (4) | 0.0277 (3) | 0.0029 (3) | 0.0071 (2) | 0.0001 (3) |
Ni1 | 0.0297 (4) | 0.0543 (5) | 0.0314 (4) | −0.0011 (3) | 0.0087 (3) | −0.0033 (3) |
S1 | 0.0250 (7) | 0.0552 (8) | 0.0370 (7) | 0.0022 (6) | 0.0088 (5) | −0.0093 (6) |
O1 | 0.040 (2) | 0.066 (3) | 0.033 (2) | 0.0106 (18) | 0.0136 (17) | −0.0056 (18) |
O2 | 0.0252 (18) | 0.048 (2) | 0.0379 (19) | 0.0035 (16) | 0.0056 (15) | −0.0007 (16) |
O3 | 0.0267 (18) | 0.053 (2) | 0.0344 (19) | 0.0057 (16) | 0.0079 (15) | 0.0024 (16) |
O4 | 0.036 (2) | 0.057 (2) | 0.035 (2) | 0.0085 (18) | 0.0064 (16) | −0.0009 (17) |
O5 | 0.047 (2) | 0.077 (3) | 0.041 (2) | 0.005 (2) | 0.0176 (19) | −0.001 (2) |
O6 | 0.074 (3) | 0.084 (3) | 0.050 (3) | 0.012 (2) | 0.025 (2) | −0.011 (2) |
O7 | 0.038 (2) | 0.050 (2) | 0.044 (2) | 0.0007 (17) | 0.0134 (17) | −0.0023 (17) |
O8 | 0.040 (2) | 0.076 (3) | 0.049 (2) | 0.017 (2) | 0.0185 (19) | 0.005 (2) |
O9 | 0.0343 (19) | 0.048 (2) | 0.041 (2) | 0.0102 (16) | 0.0086 (16) | 0.0013 (16) |
O10 | 0.097 (4) | 0.097 (4) | 0.089 (4) | 0.015 (3) | 0.040 (3) | 0.025 (3) |
N1 | 0.026 (2) | 0.037 (2) | 0.032 (2) | 0.0074 (17) | 0.0110 (17) | 0.0031 (18) |
N2 | 0.037 (2) | 0.043 (3) | 0.035 (2) | 0.006 (2) | 0.0076 (19) | 0.003 (2) |
N3 | 0.027 (2) | 0.038 (2) | 0.033 (2) | 0.0054 (18) | 0.0097 (18) | 0.0025 (18) |
N4 | 0.028 (2) | 0.055 (3) | 0.038 (3) | −0.001 (2) | 0.0104 (19) | −0.006 (2) |
N5 | 0.022 (2) | 0.055 (3) | 0.044 (3) | −0.0002 (19) | 0.0111 (19) | −0.006 (2) |
N6 | 0.029 (2) | 0.041 (2) | 0.038 (2) | 0.0025 (19) | 0.0070 (19) | 0.002 (2) |
C1 | 0.024 (3) | 0.041 (3) | 0.033 (3) | 0.010 (2) | 0.006 (2) | −0.002 (2) |
C2 | 0.029 (3) | 0.033 (3) | 0.033 (3) | 0.009 (2) | 0.010 (2) | 0.001 (2) |
C3 | 0.024 (3) | 0.046 (3) | 0.042 (3) | 0.011 (2) | 0.014 (2) | 0.005 (2) |
C4 | 0.020 (3) | 0.056 (3) | 0.054 (4) | 0.003 (2) | 0.011 (2) | −0.003 (3) |
C5 | 0.030 (3) | 0.047 (3) | 0.043 (3) | 0.004 (2) | 0.006 (2) | −0.009 (2) |
C6 | 0.026 (3) | 0.037 (3) | 0.033 (3) | 0.009 (2) | 0.008 (2) | 0.002 (2) |
C7 | 0.031 (3) | 0.041 (3) | 0.034 (3) | 0.009 (2) | 0.010 (2) | 0.004 (2) |
C8 | 0.060 (4) | 0.052 (4) | 0.035 (3) | 0.007 (3) | 0.012 (3) | −0.002 (3) |
C9 | 0.051 (3) | 0.040 (3) | 0.041 (3) | 0.007 (3) | 0.011 (3) | 0.005 (2) |
C10 | 0.055 (4) | 0.048 (3) | 0.039 (3) | 0.001 (3) | −0.001 (3) | 0.000 (3) |
C11 | 0.047 (4) | 0.059 (4) | 0.049 (4) | 0.004 (3) | −0.005 (3) | −0.002 (3) |
C12 | 0.035 (3) | 0.058 (4) | 0.055 (4) | 0.004 (3) | 0.005 (3) | 0.001 (3) |
C13 | 0.036 (3) | 0.045 (3) | 0.044 (3) | 0.010 (2) | 0.010 (2) | 0.007 (2) |
C14 | 0.039 (3) | 0.047 (3) | 0.035 (3) | 0.012 (3) | 0.005 (2) | 0.003 (2) |
C15 | 0.027 (3) | 0.045 (3) | 0.031 (3) | 0.005 (2) | 0.008 (2) | −0.002 (2) |
C16 | 0.026 (3) | 0.042 (3) | 0.032 (3) | 0.004 (2) | 0.008 (2) | 0.000 (2) |
C17 | 0.027 (2) | 0.029 (3) | 0.029 (3) | 0.003 (2) | 0.007 (2) | 0.002 (2) |
C18 | 0.027 (3) | 0.038 (3) | 0.035 (3) | 0.003 (2) | 0.013 (2) | 0.007 (2) |
C19 | 0.029 (3) | 0.047 (3) | 0.026 (3) | 0.008 (2) | 0.003 (2) | 0.002 (2) |
C20 | 0.026 (3) | 0.033 (3) | 0.031 (3) | 0.004 (2) | 0.004 (2) | 0.001 (2) |
C21 | 0.023 (2) | 0.036 (3) | 0.038 (3) | 0.005 (2) | 0.013 (2) | 0.007 (2) |
C22 | 0.032 (3) | 0.057 (4) | 0.040 (3) | 0.004 (3) | 0.010 (2) | −0.002 (3) |
C23 | 0.031 (3) | 0.057 (3) | 0.046 (3) | 0.010 (3) | 0.012 (2) | −0.002 (3) |
C24 | 0.030 (3) | 0.032 (3) | 0.038 (3) | 0.008 (2) | 0.007 (2) | 0.000 (2) |
C25 | 0.030 (3) | 0.040 (3) | 0.040 (3) | 0.005 (2) | 0.011 (2) | −0.002 (2) |
C26 | 0.026 (3) | 0.046 (3) | 0.040 (3) | 0.006 (2) | 0.010 (2) | 0.005 (2) |
Ni2—N1 | 1.897 (4) | C1—C2 | 1.523 (6) |
Ni2—N3 | 1.954 (4) | C2—C3 | 1.368 (6) |
Ni2—O3 | 2.015 (3) | C3—C4 | 1.381 (7) |
Ni2—O2 | 2.040 (3) | C3—H3 | 0.9300 |
Ni2—O9 | 2.291 (3) | C4—C5 | 1.382 (7) |
Ni1—N2 | 1.906 (4) | C4—H4 | 0.9300 |
Ni1—N6 | 1.960 (4) | C5—C6 | 1.377 (6) |
Ni1—O7 | 2.007 (3) | C5—H5 | 0.9300 |
Ni1—O5 | 2.015 (4) | C6—C7 | 1.523 (6) |
Ni1—O10 | 2.594 (5) | C8—C9 | 1.497 (8) |
Ni1—O1i | 2.556 (4) | C9—C10 | 1.389 (7) |
S1—C20 | 1.708 (5) | C10—C11 | 1.395 (8) |
S1—C21 | 1.726 (4) | C10—H10 | 0.9300 |
O1—C1 | 1.234 (5) | C11—C12 | 1.401 (8) |
O2—C1 | 1.281 (5) | C11—H11 | 0.9300 |
O3—C7 | 1.286 (6) | C12—C13 | 1.379 (7) |
O4—C7 | 1.240 (6) | C12—H12 | 0.9300 |
O5—C8 | 1.304 (7) | C13—C14 | 1.498 (7) |
O6—C8 | 1.226 (6) | C15—C16 | 1.374 (6) |
O7—C14 | 1.300 (6) | C15—H15 | 0.9300 |
O8—C14 | 1.229 (6) | C16—C17 | 1.387 (6) |
O9—H1W | 0.8282 | C16—H16 | 0.9300 |
O9—H2W | 0.8325 | C17—C18 | 1.390 (6) |
O10—H3W | 0.8496 | C17—C20 | 1.460 (6) |
O10—H4W | 0.8529 | C18—C19 | 1.372 (6) |
N1—C6 | 1.328 (6) | C18—H18 | 0.9300 |
N1—C2 | 1.334 (6) | C19—H19 | 0.9300 |
N2—C9 | 1.325 (6) | C21—C24 | 1.466 (6) |
N2—C13 | 1.326 (6) | C22—C23 | 1.368 (7) |
N3—C19 | 1.339 (6) | C22—H22 | 0.9300 |
N3—C15 | 1.353 (6) | C23—C24 | 1.384 (7) |
N4—C20 | 1.318 (6) | C23—H23 | 0.9300 |
N4—N5 | 1.370 (5) | C24—C25 | 1.394 (6) |
N5—C21 | 1.297 (6) | C25—C26 | 1.387 (7) |
N6—C26 | 1.330 (6) | C25—H25 | 0.9300 |
N6—C22 | 1.348 (6) | C26—H26 | 0.9300 |
N1—Ni2—N3 | 171.86 (16) | N1—C6—C5 | 119.3 (4) |
N1—Ni2—O3 | 80.99 (14) | N1—C6—C7 | 111.7 (4) |
N3—Ni2—O3 | 99.57 (15) | C5—C6—C7 | 128.9 (4) |
N1—Ni2—O2 | 80.38 (14) | O4—C7—O3 | 125.9 (4) |
N3—Ni2—O2 | 97.88 (14) | O4—C7—C6 | 119.9 (4) |
O3—Ni2—O2 | 160.06 (14) | O3—C7—C6 | 114.1 (4) |
N1—Ni2—O9 | 93.67 (14) | O6—C8—O5 | 123.7 (6) |
N3—Ni2—O9 | 94.42 (14) | O6—C8—C9 | 122.1 (5) |
O3—Ni2—O9 | 92.34 (13) | O5—C8—C9 | 114.2 (5) |
O2—Ni2—O9 | 95.87 (13) | N2—C9—C10 | 120.9 (5) |
N2—Ni1—N6 | 176.70 (18) | N2—C9—C8 | 112.0 (5) |
N2—Ni1—O7 | 80.93 (16) | C10—C9—C8 | 127.1 (5) |
N6—Ni1—O7 | 98.94 (16) | C9—C10—C11 | 116.4 (5) |
N2—Ni1—O5 | 80.32 (17) | C9—C10—H10 | 121.8 |
N6—Ni1—O5 | 99.67 (16) | C11—C10—H10 | 121.8 |
O7—Ni1—O5 | 161.16 (16) | C10—C11—C12 | 121.9 (5) |
N2—Ni1—O10 | 90.19 (17) | C10—C11—H11 | 119.0 |
N6—Ni1—O10 | 86.53 (17) | C12—C11—H11 | 119.0 |
O7—Ni1—O10 | 81.20 (16) | C13—C12—C11 | 117.0 (5) |
O5—Ni1—O10 | 97.04 (17) | C13—C12—H12 | 121.5 |
N2—Ni1—O1i | 93.23 (15) | C11—C12—H12 | 121.5 |
N6—Ni1—O1i | 90.06 (15) | N2—C13—C12 | 120.5 (5) |
O7—Ni1—O1i | 86.78 (13) | N2—C13—C14 | 112.0 (5) |
O5—Ni1—O1i | 96.07 (14) | C12—C13—C14 | 127.5 (5) |
C20—S1—C21 | 87.9 (2) | O8—C14—O7 | 123.9 (5) |
C1—O2—Ni2 | 113.8 (3) | O8—C14—C13 | 121.6 (5) |
C7—O3—Ni2 | 114.5 (3) | O7—C14—C13 | 114.6 (4) |
C8—O5—Ni1 | 114.6 (4) | N3—C15—C16 | 122.4 (4) |
C14—O7—Ni1 | 113.8 (3) | N3—C15—H15 | 118.8 |
Ni2—O9—H1W | 110.3 | C16—C15—H15 | 118.8 |
Ni2—O9—H2W | 105.3 | C15—C16—C17 | 119.4 (5) |
H1W—O9—H2W | 111.2 | C15—C16—H16 | 120.3 |
Ni1—O10—H3W | 101.0 | C17—C16—H16 | 120.3 |
Ni1—O10—H4W | 108.8 | C18—C17—C16 | 118.2 (4) |
H3W—O10—H4W | 112.9 | C18—C17—C20 | 121.3 (4) |
C6—N1—C2 | 122.7 (4) | C16—C17—C20 | 120.5 (4) |
C6—N1—Ni2 | 118.3 (3) | C19—C18—C17 | 119.0 (4) |
C2—N1—Ni2 | 118.9 (3) | C19—C18—H18 | 120.5 |
C9—N2—C13 | 123.2 (5) | C17—C18—H18 | 120.5 |
C9—N2—Ni1 | 118.8 (4) | N3—C19—C18 | 123.2 (4) |
C13—N2—Ni1 | 118.0 (4) | N3—C19—H19 | 118.4 |
C19—N3—C15 | 117.7 (4) | C18—C19—H19 | 118.4 |
C19—N3—Ni2 | 122.7 (3) | N4—C20—C17 | 123.4 (4) |
C15—N3—Ni2 | 119.6 (3) | N4—C20—S1 | 113.4 (3) |
C20—N4—N5 | 112.2 (4) | C17—C20—S1 | 123.2 (3) |
C21—N5—N4 | 113.4 (4) | N5—C21—C24 | 125.1 (4) |
C26—N6—C22 | 117.2 (4) | N5—C21—S1 | 113.0 (3) |
C26—N6—Ni1 | 124.1 (3) | C24—C21—S1 | 121.9 (4) |
C22—N6—Ni1 | 118.7 (4) | N6—C22—C23 | 122.3 (5) |
O1—C1—O2 | 126.5 (4) | N6—C22—H22 | 118.9 |
O1—C1—C2 | 118.9 (4) | C23—C22—H22 | 118.9 |
O2—C1—C2 | 114.6 (4) | C22—C23—C24 | 120.8 (5) |
N1—C2—C3 | 120.5 (4) | C22—C23—H23 | 119.6 |
N1—C2—C1 | 111.2 (4) | C24—C23—H23 | 119.6 |
C3—C2—C1 | 128.3 (4) | C23—C24—C25 | 117.3 (5) |
C2—C3—C4 | 118.2 (4) | C23—C24—C21 | 120.8 (4) |
C2—C3—H3 | 120.9 | C25—C24—C21 | 121.9 (4) |
C4—C3—H3 | 120.9 | C26—C25—C24 | 118.3 (5) |
C3—C4—C5 | 120.3 (5) | C26—C25—H25 | 120.9 |
C3—C4—H4 | 119.9 | C24—C25—H25 | 120.9 |
C5—C4—H4 | 119.9 | N6—C26—C25 | 124.1 (5) |
C6—C5—C4 | 119.0 (5) | N6—C26—H26 | 118.0 |
C6—C5—H5 | 120.5 | C25—C26—H26 | 118.0 |
C4—C5—H5 | 120.5 | ||
N1—Ni2—O2—C1 | −9.6 (3) | N1—C6—C7—O3 | 3.7 (6) |
N3—Ni2—O2—C1 | 178.5 (3) | C5—C6—C7—O3 | −178.0 (5) |
O3—Ni2—O2—C1 | −30.6 (6) | Ni1—O5—C8—O6 | −178.0 (5) |
O9—Ni2—O2—C1 | 83.2 (3) | Ni1—O5—C8—C9 | 1.6 (6) |
N1—Ni2—O3—C7 | 5.5 (3) | C13—N2—C9—C10 | 1.0 (8) |
N3—Ni2—O3—C7 | 177.3 (3) | Ni1—N2—C9—C10 | −178.4 (4) |
O2—Ni2—O3—C7 | 26.5 (6) | C13—N2—C9—C8 | −178.0 (5) |
O9—Ni2—O3—C7 | −87.8 (3) | Ni1—N2—C9—C8 | 2.5 (6) |
N2—Ni1—O5—C8 | −0.2 (4) | O6—C8—C9—N2 | 176.9 (5) |
N6—Ni1—O5—C8 | −176.9 (4) | O5—C8—C9—N2 | −2.6 (7) |
O7—Ni1—O5—C8 | −5.8 (8) | O6—C8—C9—C10 | −2.0 (10) |
O10—Ni1—O5—C8 | −89.2 (4) | O5—C8—C9—C10 | 178.4 (5) |
N2—Ni1—O7—C14 | 6.8 (3) | N2—C9—C10—C11 | 0.6 (8) |
N6—Ni1—O7—C14 | −176.5 (3) | C8—C9—C10—C11 | 179.5 (5) |
O5—Ni1—O7—C14 | 12.4 (7) | C9—C10—C11—C12 | −1.6 (9) |
O10—Ni1—O7—C14 | 98.4 (4) | C10—C11—C12—C13 | 1.1 (9) |
O3—Ni2—N1—C6 | −3.3 (3) | C9—N2—C13—C12 | −1.6 (8) |
O2—Ni2—N1—C6 | −176.2 (4) | Ni1—N2—C13—C12 | 177.9 (4) |
O9—Ni2—N1—C6 | 88.4 (4) | C9—N2—C13—C14 | 179.3 (5) |
O3—Ni2—N1—C2 | 179.3 (4) | Ni1—N2—C13—C14 | −1.3 (6) |
O2—Ni2—N1—C2 | 6.4 (3) | C11—C12—C13—N2 | 0.5 (8) |
O9—Ni2—N1—C2 | −88.9 (4) | C11—C12—C13—C14 | 179.5 (5) |
O7—Ni1—N2—C9 | 176.8 (4) | Ni1—O7—C14—O8 | 171.5 (4) |
O5—Ni1—N2—C9 | −1.4 (4) | Ni1—O7—C14—C13 | −9.2 (5) |
O10—Ni1—N2—C9 | 95.7 (4) | N2—C13—C14—O8 | −173.6 (5) |
O7—Ni1—N2—C13 | −2.7 (4) | C12—C13—C14—O8 | 7.3 (9) |
O5—Ni1—N2—C13 | 179.1 (4) | N2—C13—C14—O7 | 7.1 (6) |
O10—Ni1—N2—C13 | −83.8 (4) | C12—C13—C14—O7 | −172.0 (5) |
O3—Ni2—N3—C19 | 1.1 (4) | C19—N3—C15—C16 | 0.7 (7) |
O2—Ni2—N3—C19 | 171.4 (4) | Ni2—N3—C15—C16 | −177.6 (4) |
O9—Ni2—N3—C19 | −92.0 (4) | N3—C15—C16—C17 | 0.3 (8) |
O3—Ni2—N3—C15 | 179.3 (4) | C15—C16—C17—C18 | −1.0 (7) |
O2—Ni2—N3—C15 | −10.4 (4) | C15—C16—C17—C20 | 178.5 (4) |
O9—Ni2—N3—C15 | 86.2 (4) | C16—C17—C18—C19 | 0.9 (7) |
C20—N4—N5—C21 | 0.5 (6) | C20—C17—C18—C19 | −178.7 (4) |
O7—Ni1—N6—C26 | 5.0 (4) | C15—N3—C19—C18 | −0.9 (7) |
O5—Ni1—N6—C26 | −177.9 (4) | Ni2—N3—C19—C18 | 177.4 (4) |
O10—Ni1—N6—C26 | 85.5 (4) | C17—C18—C19—N3 | 0.1 (7) |
O7—Ni1—N6—C22 | −176.0 (4) | N5—N4—C20—C17 | 178.9 (4) |
O5—Ni1—N6—C22 | 1.1 (4) | N5—N4—C20—S1 | −0.2 (5) |
O10—Ni1—N6—C22 | −95.5 (4) | C18—C17—C20—N4 | 16.3 (7) |
Ni2—O2—C1—O1 | −170.4 (4) | C16—C17—C20—N4 | −163.3 (5) |
Ni2—O2—C1—C2 | 10.6 (5) | C18—C17—C20—S1 | −164.7 (4) |
C6—N1—C2—C3 | −0.1 (7) | C16—C17—C20—S1 | 15.8 (7) |
Ni2—N1—C2—C3 | 177.1 (3) | C21—S1—C20—N4 | −0.1 (4) |
C6—N1—C2—C1 | −179.9 (4) | C21—S1—C20—C17 | −179.2 (4) |
Ni2—N1—C2—C1 | −2.7 (5) | N4—N5—C21—C24 | −179.2 (4) |
O1—C1—C2—N1 | 175.3 (4) | N4—N5—C21—S1 | −0.6 (6) |
O2—C1—C2—N1 | −5.7 (6) | C20—S1—C21—N5 | 0.4 (4) |
O1—C1—C2—C3 | −4.5 (8) | C20—S1—C21—C24 | 179.1 (4) |
O2—C1—C2—C3 | 174.5 (5) | C26—N6—C22—C23 | 1.8 (8) |
N1—C2—C3—C4 | 0.8 (7) | Ni1—N6—C22—C23 | −177.2 (4) |
C1—C2—C3—C4 | −179.4 (5) | N6—C22—C23—C24 | −0.7 (9) |
C2—C3—C4—C5 | −1.1 (8) | C22—C23—C24—C25 | 0.3 (8) |
C3—C4—C5—C6 | 0.7 (8) | C22—C23—C24—C21 | 179.1 (5) |
C2—N1—C6—C5 | −0.3 (7) | N5—C21—C24—C23 | 179.8 (5) |
Ni2—N1—C6—C5 | −177.5 (4) | S1—C21—C24—C23 | 1.3 (7) |
C2—N1—C6—C7 | 178.2 (4) | N5—C21—C24—C25 | −1.5 (8) |
Ni2—N1—C6—C7 | 1.0 (5) | S1—C21—C24—C25 | 180.0 (4) |
C4—C5—C6—N1 | 0.0 (8) | C23—C24—C25—C26 | −0.9 (7) |
C4—C5—C6—C7 | −178.2 (5) | C21—C24—C25—C26 | −179.7 (4) |
Ni2—O3—C7—O4 | 176.1 (4) | C22—N6—C26—C25 | −2.6 (7) |
Ni2—O3—C7—C6 | −6.4 (5) | Ni1—N6—C26—C25 | 176.4 (4) |
N1—C6—C7—O4 | −178.5 (4) | C24—C25—C26—N6 | 2.2 (7) |
C5—C6—C7—O4 | −0.2 (8) |
Symmetry code: (i) x−2, y−1, z. |
D—H···A | D—H | H···A | D···A | D—H···A |
O9—H1W···O4ii | 0.83 | 1.99 | 2.815 (5) | 178 |
O9—H2W···O8iii | 0.83 | 1.95 | 2.755 (5) | 161 |
O9—H2W···O7iii | 0.83 | 2.43 | 3.093 (5) | 138 |
O10—H3W···S1iv | 0.85 | 2.75 | 3.601 (5) | 179 |
O10—H4W···O5v | 0.85 | 1.97 | 2.814 (6) | 168 |
Symmetry codes: (ii) −x+4, −y+3, −z+2; (iii) x+2, y+1, z; (iv) x−1, y, z; (v) −x, −y+1, −z+1. |
Experimental details
Crystal data | |
Chemical formula | [Ni2(C7H3NO4)2(C12H8N4S)(H2O)2] |
Mr | 723.94 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 298 |
a, b, c (Å) | 8.2998 (12), 10.0819 (15), 17.318 (3) |
α, β, γ (°) | 96.652 (2), 100.629 (2), 108.077 (2) |
V (Å3) | 1330.6 (3) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 1.57 |
Crystal size (mm) | 0.28 × 0.21 × 0.15 |
Data collection | |
Diffractometer | Bruker APEXII diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2004) |
Tmin, Tmax | 0.668, 0.799 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 9932, 4735, 3249 |
Rint | 0.038 |
(sin θ/λ)max (Å−1) | 0.599 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.046, 0.147, 0.97 |
No. of reflections | 4735 |
No. of parameters | 406 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.43, −0.54 |
Computer programs: APEX2 (Bruker, 2004), SAINT (Bruker, 2004), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEPIII (Burnett & Johnson, 1996) and ORTEP-3 for Windows (Farrugia, 1997).
D—H···A | D—H | H···A | D···A | D—H···A |
O9—H1W···O4i | 0.83 | 1.99 | 2.815 (5) | 177.6 |
O9—H2W···O8ii | 0.83 | 1.95 | 2.755 (5) | 161.1 |
O9—H2W···O7ii | 0.83 | 2.43 | 3.093 (5) | 137.5 |
O10—H3W···S1iii | 0.85 | 2.75 | 3.601 (5) | 179.4 |
O10—H4W···O5iv | 0.85 | 1.97 | 2.814 (6) | 167.9 |
Symmetry codes: (i) −x+4, −y+3, −z+2; (ii) x+2, y+1, z; (iii) x−1, y, z; (iv) −x, −y+1, −z+1. |
Acknowledgements
The author is grateful to Li Shui Vocational & Technical College for financial support.
References
Bruker (2004). APEX2, SAINT and SADABS. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Burnett, M. N. & Johnson, C. K. (1996). ORTEPIII. Report ORNL-6895. Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA. Google Scholar
Dong, Y. B., Ma, J. P., Huang, R. Q., Smith, M. D. & Loye, H. C. (2003). Inorg. Chem. 42, 294–300. Web of Science CSD CrossRef PubMed CAS Google Scholar
Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565. CrossRef IUCr Journals Google Scholar
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Recently, metal-organic frameworks have been obtained by using linear 4,4'-bipyridine, 1,2-bis(4-pyridyl)ethene and other bipyridine-like N,N'-donor ligands. However, the V-shaped N,N'-ligands, such as 2,5-di-4-pyridyl-1,3,4-oxadiazole, 4-amino-2,5-di-4-pyridyl-1,2,4-triazole, and 2,5-bis-(4- pyridyl)-1,3,4-thiadiazole find limited use as building blocks (Zhang et al., 2005, Dong et al., 2003). A study on the effect of angular N-containing ligands on the construction of coordination polymers in the presence of pyridine-2,6-dicarboxylic acid (pydc) is still not available (Wen et al., 2007). In this paper, we report crystal structure of the title complex (I) containing an angular co-ligand.
The asymmetric unit of the title compound contains of two independent NiII ions, one bpt ligand, two pydc moieties, and two coordinated water molecules (Scheme 1, Figure 1). The two unique NiII ions have different coordination environments. Atom Ni1 adopts a slightly-distorted octahedral coordination formed by three O atoms from two adjacent pydc ligands, two N atoms from bpt and pydc ligands, and one coordinated water molecule, while atom Ni2 has distorted square-pyramidal coordination geometry and is coordinated by two oxygen atoms from two carboxylate groups and two N atoms from the pyridine rings of pydc and bpt, and one coordinated water molecule is located at the apical site. Both carboxylic groups are out of the plane of corresponding pyridine rings, with the dihedral angles 88.3 (5)° and 90.5 (7)°, respectively. The bpt ligands connect Ni atoms via two terminal pyridyl N atoms to form a binuclear unit. Furthermore, adjacent dimeric units are linked by carboxylic oxygen atoms of pydc ligands to form 1-D zigzag polymeric chains along [110]. In the crystal structure, H atoms of both water molecules are involved in hydrogen bonds with O atoms of uncoordinated carboxylate groups which link extended chains to form an three-dimensional network (Table 1).