organic compounds
1,3-Bis(1-benzyl-1H-benzimidazol-2-yl)-2-oxapropane
aSchool of Chemical and Biological Engineering, Lanzhou Jiaotong University, Lanzhou 730070, People's Republic of China
*Correspondence e-mail: wuhuilu@163.com
In the title compound, C30H26N4O, the dihedral angle between the two benzimidazole rings is 69.35 (9)°. The dihedral angles between the benzimidazole ring system and the phenyl ring are 76.79 (12) and 86.10 (11)° in the two benzylbenzimidazole moieties.
Related literature
For the biological activity of the benzimidazole core, see: Horton et al. (2003). For the antiprotozoal activity of 2- and 5-substituted benzimidazoles, see: Navarrete-Vázquez et al. (2001).
Experimental
Crystal data
|
Data collection: RAPID-AUTO (Rigaku/MSC, 2004); cell RAPID-AUTO; data reduction: RAPID-AUTO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536809012781/lh2800sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809012781/lh2800Isup2.hkl
A solution of 5.56 (20 mmol) of 1,3-bis(benzimidazol-2-yl)-2-oxopropane with 1.56 g (40 mmol) potassium in 150 ml tetrahydrofuran followed by addition of 5.06 g (40 mmol) benzyl bromide was concentrated and recrystallized from methanol, formimg white block crystals suitable for X-ray diffraction studies. (found: C, 78.51; H, 5.73; N,12.24 Calcd. for C30H26N4O: C, 78.58; H, 5.71; N, 12.22)
All H atoms were positioned geometrically with C—H distances ranging from 0.95 to 0.99 Å and allowed to ride on their parent atoms with Uiso(H) = 1.2 Ueq of the carrier atom.
Data collection: RAPID-AUTO (Rigaku/MSC, 2004); cell
RAPID-AUTO (Rigaku/MSC, 2004); data reduction: RAPID-AUTO (Rigaku/MSC, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. Molecular structure of the title compound. Hydrogen atoms have been omitted for clarity and the displacement ellipsoids are shown at the 30% probability level. |
C30H26N4O | Z = 2 |
Mr = 458.55 | F(000) = 484 |
Triclinic, P1 | Dx = 1.301 Mg m−3 |
Hall symbol: -P 1 | Melting point = 450–451 K |
a = 8.5477 (3) Å | Mo Kα radiation, λ = 0.71073 Å |
b = 11.8976 (5) Å | Cell parameters from 5275 reflections |
c = 12.3961 (5) Å | θ = 3.0–27.5° |
α = 101.300 (1)° | µ = 0.08 mm−1 |
β = 92.394 (1)° | T = 153 K |
γ = 107.765 (1)° | Block, white |
V = 1170.28 (8) Å3 | 0.58 × 0.52 × 0.19 mm |
Rigaku R-AXIS Spider diffractometer | 5275 independent reflections |
Radiation source: fine-focus sealed tube | 4542 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.013 |
ϕ and ω scans | θmax = 27.5°, θmin = 3.0° |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | h = −11→10 |
Tmin = 0.955, Tmax = 0.985 | k = −15→15 |
11531 measured reflections | l = −16→16 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.038 | H-atom parameters constrained |
wR(F2) = 0.126 | w = 1/[σ2(Fo2) + (0.0736P)2 + 0.3041P] where P = (Fo2 + 2Fc2)/3 |
S = 1.09 | (Δ/σ)max < 0.001 |
5275 reflections | Δρmax = 0.50 e Å−3 |
317 parameters | Δρmin = −0.34 e Å−3 |
0 restraints | Extinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.044 (4) |
C30H26N4O | γ = 107.765 (1)° |
Mr = 458.55 | V = 1170.28 (8) Å3 |
Triclinic, P1 | Z = 2 |
a = 8.5477 (3) Å | Mo Kα radiation |
b = 11.8976 (5) Å | µ = 0.08 mm−1 |
c = 12.3961 (5) Å | T = 153 K |
α = 101.300 (1)° | 0.58 × 0.52 × 0.19 mm |
β = 92.394 (1)° |
Rigaku R-AXIS Spider diffractometer | 5275 independent reflections |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | 4542 reflections with I > 2σ(I) |
Tmin = 0.955, Tmax = 0.985 | Rint = 0.013 |
11531 measured reflections |
R[F2 > 2σ(F2)] = 0.038 | 0 restraints |
wR(F2) = 0.126 | H-atom parameters constrained |
S = 1.09 | Δρmax = 0.50 e Å−3 |
5275 reflections | Δρmin = −0.34 e Å−3 |
317 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O | 0.80479 (11) | 0.49510 (8) | 0.70677 (7) | 0.0252 (2) | |
N1 | 0.73219 (13) | 0.71312 (9) | 0.90708 (8) | 0.0233 (2) | |
N2 | 0.54296 (12) | 0.52783 (9) | 0.85764 (8) | 0.0214 (2) | |
N3 | 0.99857 (12) | 0.31236 (9) | 0.79071 (8) | 0.0231 (2) | |
N4 | 0.77779 (12) | 0.22141 (9) | 0.66368 (8) | 0.0231 (2) | |
C1 | 0.58038 (15) | 0.71864 (10) | 0.93941 (9) | 0.0213 (2) | |
C2 | 0.53783 (16) | 0.81685 (11) | 0.99680 (10) | 0.0256 (3) | |
H2 | 0.6172 | 0.8953 | 1.0182 | 0.031* | |
C3 | 0.37662 (17) | 0.79594 (12) | 1.02133 (10) | 0.0276 (3) | |
H3 | 0.3451 | 0.8610 | 1.0611 | 0.033* | |
C4 | 0.25816 (16) | 0.68035 (12) | 0.98864 (10) | 0.0276 (3) | |
H4 | 0.1483 | 0.6695 | 1.0065 | 0.033* | |
C5 | 0.29667 (15) | 0.58181 (11) | 0.93114 (10) | 0.0247 (3) | |
H5 | 0.2164 | 0.5039 | 0.9086 | 0.030* | |
C6 | 0.46015 (15) | 0.60377 (10) | 0.90831 (9) | 0.0208 (2) | |
C7 | 0.70389 (15) | 0.59876 (11) | 0.85997 (9) | 0.0217 (2) | |
C8 | 0.83822 (16) | 0.55036 (12) | 0.82143 (10) | 0.0264 (3) | |
H8A | 0.9446 | 0.6171 | 0.8349 | 0.032* | |
H8B | 0.8481 | 0.4902 | 0.8640 | 0.032* | |
C9 | 0.92732 (15) | 0.44005 (11) | 0.67180 (10) | 0.0258 (3) | |
H9A | 1.0385 | 0.4975 | 0.7013 | 0.031* | |
H9B | 0.9208 | 0.4227 | 0.5900 | 0.031* | |
C10 | 0.90483 (14) | 0.32529 (11) | 0.71040 (10) | 0.0222 (2) | |
C11 | 0.79369 (14) | 0.13374 (11) | 0.71787 (9) | 0.0221 (2) | |
C12 | 0.70094 (16) | 0.01242 (12) | 0.70590 (11) | 0.0284 (3) | |
H12 | 0.6078 | −0.0257 | 0.6520 | 0.034* | |
C13 | 0.75138 (17) | −0.04945 (12) | 0.77646 (11) | 0.0295 (3) | |
H13 | 0.6919 | −0.1325 | 0.7706 | 0.035* | |
C14 | 0.88820 (17) | 0.00726 (12) | 0.85663 (11) | 0.0283 (3) | |
H14 | 0.9187 | −0.0382 | 0.9040 | 0.034* | |
C15 | 0.98002 (15) | 0.12805 (12) | 0.86844 (10) | 0.0258 (3) | |
H15 | 1.0722 | 0.1661 | 0.9231 | 0.031* | |
C16 | 0.93194 (14) | 0.19187 (10) | 0.79690 (10) | 0.0212 (2) | |
C17 | 0.64947 (15) | 0.20654 (12) | 0.57568 (10) | 0.0257 (3) | |
H17A | 0.6159 | 0.2803 | 0.5873 | 0.031* | |
H17B | 0.5516 | 0.1378 | 0.5808 | 0.031* | |
C18 | 0.70267 (15) | 0.18411 (11) | 0.46087 (10) | 0.0236 (3) | |
C19 | 0.66731 (18) | 0.24654 (12) | 0.38477 (11) | 0.0312 (3) | |
H19 | 0.6115 | 0.3040 | 0.4057 | 0.037* | |
C20 | 0.7125 (2) | 0.22588 (14) | 0.27833 (12) | 0.0403 (4) | |
H20 | 0.6869 | 0.2686 | 0.2266 | 0.048* | |
C21 | 0.7950 (2) | 0.14290 (14) | 0.24755 (12) | 0.0393 (3) | |
H21 | 0.8275 | 0.1294 | 0.1750 | 0.047* | |
C22 | 0.82983 (19) | 0.07973 (13) | 0.32288 (12) | 0.0363 (3) | |
H22 | 0.8861 | 0.0225 | 0.3020 | 0.044* | |
C23 | 0.78271 (17) | 0.09980 (12) | 0.42866 (11) | 0.0303 (3) | |
H23 | 0.8055 | 0.0553 | 0.4797 | 0.036* | |
C24 | 0.46863 (16) | 0.39871 (10) | 0.81196 (10) | 0.0250 (3) | |
H24A | 0.3901 | 0.3635 | 0.8622 | 0.030* | |
H24B | 0.5565 | 0.3603 | 0.8095 | 0.030* | |
C25 | 0.37816 (14) | 0.36798 (10) | 0.69711 (10) | 0.0214 (2) | |
C26 | 0.28424 (15) | 0.24803 (12) | 0.65272 (12) | 0.0289 (3) | |
H26 | 0.2773 | 0.1885 | 0.6950 | 0.035* | |
C27 | 0.20114 (18) | 0.21494 (13) | 0.54754 (13) | 0.0383 (3) | |
H27 | 0.1383 | 0.1327 | 0.5179 | 0.046* | |
C28 | 0.20876 (18) | 0.30063 (14) | 0.48511 (12) | 0.0382 (3) | |
H28 | 0.1505 | 0.2778 | 0.4132 | 0.046* | |
C29 | 0.30168 (19) | 0.41940 (14) | 0.52837 (12) | 0.0352 (3) | |
H29 | 0.3079 | 0.4787 | 0.4859 | 0.042* | |
C30 | 0.38665 (17) | 0.45315 (12) | 0.63410 (11) | 0.0287 (3) | |
H30 | 0.4508 | 0.5352 | 0.6631 | 0.034* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O | 0.0294 (4) | 0.0282 (4) | 0.0204 (4) | 0.0137 (4) | 0.0023 (3) | 0.0041 (3) |
N1 | 0.0256 (5) | 0.0211 (5) | 0.0220 (5) | 0.0072 (4) | −0.0003 (4) | 0.0032 (4) |
N2 | 0.0266 (5) | 0.0177 (5) | 0.0187 (5) | 0.0064 (4) | −0.0011 (4) | 0.0031 (4) |
N3 | 0.0228 (5) | 0.0223 (5) | 0.0224 (5) | 0.0066 (4) | 0.0023 (4) | 0.0019 (4) |
N4 | 0.0236 (5) | 0.0234 (5) | 0.0208 (5) | 0.0060 (4) | −0.0005 (4) | 0.0043 (4) |
C1 | 0.0254 (6) | 0.0206 (5) | 0.0176 (5) | 0.0066 (4) | 0.0005 (4) | 0.0051 (4) |
C2 | 0.0331 (6) | 0.0207 (6) | 0.0217 (6) | 0.0085 (5) | 0.0023 (5) | 0.0023 (4) |
C3 | 0.0374 (7) | 0.0288 (6) | 0.0200 (6) | 0.0159 (5) | 0.0062 (5) | 0.0044 (5) |
C4 | 0.0297 (6) | 0.0346 (7) | 0.0204 (6) | 0.0120 (5) | 0.0047 (5) | 0.0075 (5) |
C5 | 0.0265 (6) | 0.0262 (6) | 0.0192 (5) | 0.0046 (5) | 0.0011 (4) | 0.0060 (4) |
C6 | 0.0268 (6) | 0.0208 (5) | 0.0147 (5) | 0.0072 (4) | 0.0002 (4) | 0.0045 (4) |
C7 | 0.0250 (6) | 0.0221 (6) | 0.0181 (5) | 0.0079 (4) | −0.0011 (4) | 0.0046 (4) |
C8 | 0.0286 (6) | 0.0284 (6) | 0.0225 (6) | 0.0128 (5) | −0.0019 (5) | 0.0015 (5) |
C9 | 0.0272 (6) | 0.0257 (6) | 0.0260 (6) | 0.0094 (5) | 0.0086 (5) | 0.0065 (5) |
C10 | 0.0217 (5) | 0.0223 (6) | 0.0217 (5) | 0.0071 (4) | 0.0051 (4) | 0.0021 (4) |
C11 | 0.0240 (6) | 0.0232 (6) | 0.0182 (5) | 0.0071 (5) | 0.0030 (4) | 0.0034 (4) |
C12 | 0.0294 (6) | 0.0251 (6) | 0.0243 (6) | 0.0019 (5) | −0.0017 (5) | 0.0022 (5) |
C13 | 0.0358 (7) | 0.0217 (6) | 0.0281 (6) | 0.0046 (5) | 0.0050 (5) | 0.0056 (5) |
C14 | 0.0343 (7) | 0.0292 (6) | 0.0253 (6) | 0.0138 (5) | 0.0050 (5) | 0.0083 (5) |
C15 | 0.0256 (6) | 0.0290 (6) | 0.0224 (6) | 0.0099 (5) | 0.0003 (5) | 0.0036 (5) |
C16 | 0.0209 (5) | 0.0211 (5) | 0.0201 (5) | 0.0064 (4) | 0.0040 (4) | 0.0011 (4) |
C17 | 0.0225 (6) | 0.0314 (6) | 0.0229 (6) | 0.0092 (5) | 0.0002 (5) | 0.0048 (5) |
C18 | 0.0225 (6) | 0.0210 (5) | 0.0230 (6) | 0.0025 (4) | −0.0037 (4) | 0.0030 (4) |
C19 | 0.0393 (7) | 0.0268 (6) | 0.0285 (6) | 0.0122 (5) | −0.0017 (5) | 0.0070 (5) |
C20 | 0.0543 (9) | 0.0395 (8) | 0.0271 (7) | 0.0124 (7) | −0.0023 (6) | 0.0127 (6) |
C21 | 0.0470 (8) | 0.0395 (8) | 0.0243 (6) | 0.0057 (6) | 0.0046 (6) | 0.0036 (6) |
C22 | 0.0408 (8) | 0.0321 (7) | 0.0352 (7) | 0.0125 (6) | 0.0092 (6) | 0.0032 (6) |
C23 | 0.0348 (7) | 0.0297 (6) | 0.0298 (7) | 0.0132 (5) | 0.0044 (5) | 0.0096 (5) |
C24 | 0.0343 (6) | 0.0171 (5) | 0.0223 (6) | 0.0064 (5) | 0.0001 (5) | 0.0048 (4) |
C25 | 0.0205 (5) | 0.0211 (6) | 0.0217 (6) | 0.0071 (4) | 0.0030 (4) | 0.0019 (4) |
C26 | 0.0247 (6) | 0.0222 (6) | 0.0367 (7) | 0.0056 (5) | 0.0011 (5) | 0.0027 (5) |
C27 | 0.0330 (7) | 0.0272 (7) | 0.0438 (8) | 0.0053 (5) | −0.0093 (6) | −0.0076 (6) |
C28 | 0.0369 (7) | 0.0422 (8) | 0.0285 (7) | 0.0121 (6) | −0.0081 (6) | −0.0050 (6) |
C29 | 0.0403 (7) | 0.0370 (7) | 0.0262 (7) | 0.0099 (6) | −0.0040 (6) | 0.0077 (6) |
C30 | 0.0337 (7) | 0.0238 (6) | 0.0245 (6) | 0.0044 (5) | −0.0022 (5) | 0.0046 (5) |
O—C8 | 1.4211 (14) | C13—H13 | 0.9500 |
O—C9 | 1.4350 (14) | C14—C15 | 1.3865 (18) |
N1—C7 | 1.3141 (15) | C14—H14 | 0.9500 |
N1—C1 | 1.3907 (16) | C15—C16 | 1.3985 (17) |
N2—C7 | 1.3726 (15) | C15—H15 | 0.9500 |
N2—C6 | 1.3846 (15) | C17—C18 | 1.5108 (17) |
N2—C24 | 1.4553 (14) | C17—H17A | 0.9900 |
N3—C10 | 1.3136 (16) | C17—H17B | 0.9900 |
N3—C16 | 1.3905 (15) | C18—C23 | 1.3850 (18) |
N4—C10 | 1.3748 (15) | C18—C19 | 1.3859 (18) |
N4—C11 | 1.3825 (15) | C19—C20 | 1.387 (2) |
N4—C17 | 1.4596 (15) | C19—H19 | 0.9500 |
C1—C2 | 1.3996 (17) | C20—C21 | 1.384 (2) |
C1—C6 | 1.4056 (16) | C20—H20 | 0.9500 |
C2—C3 | 1.3816 (18) | C21—C22 | 1.383 (2) |
C2—H2 | 0.9500 | C21—H21 | 0.9500 |
C3—C4 | 1.4065 (19) | C22—C23 | 1.385 (2) |
C3—H3 | 0.9500 | C22—H22 | 0.9500 |
C4—C5 | 1.3851 (18) | C23—H23 | 0.9500 |
C4—H4 | 0.9500 | C24—C25 | 1.5134 (16) |
C5—C6 | 1.3929 (17) | C24—H24A | 0.9900 |
C5—H5 | 0.9500 | C24—H24B | 0.9900 |
C7—C8 | 1.4898 (17) | C25—C30 | 1.3828 (17) |
C8—H8A | 0.9900 | C25—C26 | 1.3930 (16) |
C8—H8B | 0.9900 | C26—C27 | 1.382 (2) |
C9—C10 | 1.4945 (17) | C26—H26 | 0.9500 |
C9—H9A | 0.9900 | C27—C28 | 1.384 (2) |
C9—H9B | 0.9900 | C27—H27 | 0.9500 |
C11—C12 | 1.3935 (17) | C28—C29 | 1.378 (2) |
C11—C16 | 1.4049 (16) | C28—H28 | 0.9500 |
C12—C13 | 1.3811 (19) | C29—C30 | 1.3938 (18) |
C12—H12 | 0.9500 | C29—H29 | 0.9500 |
C13—C14 | 1.4033 (19) | C30—H30 | 0.9500 |
C8—O—C9 | 110.65 (9) | C13—C14—H14 | 119.2 |
C7—N1—C1 | 104.47 (10) | C14—C15—C16 | 117.55 (11) |
C7—N2—C6 | 106.33 (9) | C14—C15—H15 | 121.2 |
C7—N2—C24 | 128.47 (10) | C16—C15—H15 | 121.2 |
C6—N2—C24 | 125.20 (10) | N3—C16—C15 | 130.02 (11) |
C10—N3—C16 | 104.83 (10) | N3—C16—C11 | 109.99 (10) |
C10—N4—C11 | 106.39 (10) | C15—C16—C11 | 119.97 (11) |
C10—N4—C17 | 127.05 (11) | N4—C17—C18 | 113.67 (10) |
C11—N4—C17 | 126.55 (10) | N4—C17—H17A | 108.8 |
N1—C1—C2 | 129.86 (11) | C18—C17—H17A | 108.8 |
N1—C1—C6 | 110.28 (10) | N4—C17—H17B | 108.8 |
C2—C1—C6 | 119.85 (11) | C18—C17—H17B | 108.8 |
C3—C2—C1 | 117.78 (11) | H17A—C17—H17B | 107.7 |
C3—C2—H2 | 121.1 | C23—C18—C19 | 118.91 (12) |
C1—C2—H2 | 121.1 | C23—C18—C17 | 121.38 (11) |
C2—C3—C4 | 121.34 (12) | C19—C18—C17 | 119.69 (11) |
C2—C3—H3 | 119.3 | C18—C19—C20 | 120.65 (13) |
C4—C3—H3 | 119.3 | C18—C19—H19 | 119.7 |
C5—C4—C3 | 122.06 (12) | C20—C19—H19 | 119.7 |
C5—C4—H4 | 119.0 | C21—C20—C19 | 119.97 (13) |
C3—C4—H4 | 119.0 | C21—C20—H20 | 120.0 |
C4—C5—C6 | 116.01 (11) | C19—C20—H20 | 120.0 |
C4—C5—H5 | 122.0 | C22—C21—C20 | 119.69 (13) |
C6—C5—H5 | 122.0 | C22—C21—H21 | 120.2 |
N2—C6—C5 | 131.85 (11) | C20—C21—H21 | 120.2 |
N2—C6—C1 | 105.17 (10) | C21—C22—C23 | 120.05 (14) |
C5—C6—C1 | 122.96 (11) | C21—C22—H22 | 120.0 |
N1—C7—N2 | 113.75 (11) | C23—C22—H22 | 120.0 |
N1—C7—C8 | 122.39 (11) | C18—C23—C22 | 120.71 (12) |
N2—C7—C8 | 123.68 (11) | C18—C23—H23 | 119.6 |
O—C8—C7 | 110.75 (10) | C22—C23—H23 | 119.6 |
O—C8—H8A | 109.5 | N2—C24—C25 | 114.13 (10) |
C7—C8—H8A | 109.5 | N2—C24—H24A | 108.7 |
O—C8—H8B | 109.5 | C25—C24—H24A | 108.7 |
C7—C8—H8B | 109.5 | N2—C24—H24B | 108.7 |
H8A—C8—H8B | 108.1 | C25—C24—H24B | 108.7 |
O—C9—C10 | 112.03 (10) | H24A—C24—H24B | 107.6 |
O—C9—H9A | 109.2 | C30—C25—C26 | 118.82 (11) |
C10—C9—H9A | 109.2 | C30—C25—C24 | 122.96 (11) |
O—C9—H9B | 109.2 | C26—C25—C24 | 118.21 (11) |
C10—C9—H9B | 109.2 | C27—C26—C25 | 120.48 (13) |
H9A—C9—H9B | 107.9 | C27—C26—H26 | 119.8 |
N3—C10—N4 | 113.39 (11) | C25—C26—H26 | 119.8 |
N3—C10—C9 | 125.14 (11) | C26—C27—C28 | 120.52 (13) |
N4—C10—C9 | 121.46 (11) | C26—C27—H27 | 119.7 |
N4—C11—C12 | 131.98 (11) | C28—C27—H27 | 119.7 |
N4—C11—C16 | 105.38 (10) | C29—C28—C27 | 119.31 (13) |
C12—C11—C16 | 122.64 (11) | C29—C28—H28 | 120.3 |
C13—C12—C11 | 116.55 (11) | C27—C28—H28 | 120.3 |
C13—C12—H12 | 121.7 | C28—C29—C30 | 120.41 (13) |
C11—C12—H12 | 121.7 | C28—C29—H29 | 119.8 |
C12—C13—C14 | 121.68 (12) | C30—C29—H29 | 119.8 |
C12—C13—H13 | 119.2 | C25—C30—C29 | 120.44 (12) |
C14—C13—H13 | 119.2 | C25—C30—H30 | 119.8 |
C15—C14—C13 | 121.61 (12) | C29—C30—H30 | 119.8 |
C15—C14—H14 | 119.2 | ||
C7—N1—C1—C2 | 177.64 (12) | C17—N4—C11—C16 | −178.40 (11) |
C7—N1—C1—C6 | −0.91 (12) | N4—C11—C12—C13 | −179.01 (13) |
N1—C1—C2—C3 | −178.07 (12) | C16—C11—C12—C13 | 0.11 (19) |
C6—C1—C2—C3 | 0.35 (17) | C11—C12—C13—C14 | 0.5 (2) |
C1—C2—C3—C4 | −0.82 (18) | C12—C13—C14—C15 | −0.4 (2) |
C2—C3—C4—C5 | 0.42 (19) | C13—C14—C15—C16 | −0.32 (19) |
C3—C4—C5—C6 | 0.47 (18) | C10—N3—C16—C15 | −178.95 (12) |
C7—N2—C6—C5 | −178.66 (12) | C10—N3—C16—C11 | −0.61 (13) |
C24—N2—C6—C5 | 1.42 (19) | C14—C15—C16—N3 | 179.09 (12) |
C7—N2—C6—C1 | −0.40 (12) | C14—C15—C16—C11 | 0.90 (17) |
C24—N2—C6—C1 | 179.68 (10) | N4—C11—C16—N3 | −0.03 (13) |
C4—C5—C6—N2 | 177.04 (12) | C12—C11—C16—N3 | −179.35 (11) |
C4—C5—C6—C1 | −0.95 (17) | N4—C11—C16—C15 | 178.50 (10) |
N1—C1—C6—N2 | 0.82 (12) | C12—C11—C16—C15 | −0.82 (18) |
C2—C1—C6—N2 | −177.89 (10) | C10—N4—C17—C18 | 82.90 (15) |
N1—C1—C6—C5 | 179.27 (10) | C11—N4—C17—C18 | −98.27 (14) |
C2—C1—C6—C5 | 0.56 (17) | N4—C17—C18—C23 | 47.20 (16) |
C1—N1—C7—N2 | 0.66 (13) | N4—C17—C18—C19 | −134.51 (12) |
C1—N1—C7—C8 | −174.66 (11) | C23—C18—C19—C20 | −0.6 (2) |
C6—N2—C7—N1 | −0.17 (13) | C17—C18—C19—C20 | −178.91 (12) |
C24—N2—C7—N1 | 179.75 (11) | C18—C19—C20—C21 | −0.5 (2) |
C6—N2—C7—C8 | 175.08 (10) | C19—C20—C21—C22 | 0.9 (2) |
C24—N2—C7—C8 | −5.00 (18) | C20—C21—C22—C23 | −0.2 (2) |
C9—O—C8—C7 | −175.36 (10) | C19—C18—C23—C22 | 1.3 (2) |
N1—C7—C8—O | −122.70 (12) | C17—C18—C23—C22 | 179.60 (12) |
N2—C7—C8—O | 62.45 (15) | C21—C22—C23—C18 | −0.9 (2) |
C8—O—C9—C10 | 74.56 (13) | C7—N2—C24—C25 | −98.23 (14) |
C16—N3—C10—N4 | 1.06 (13) | C6—N2—C24—C25 | 81.68 (14) |
C16—N3—C10—C9 | −179.86 (11) | N2—C24—C25—C30 | 9.57 (17) |
C11—N4—C10—N3 | −1.10 (14) | N2—C24—C25—C26 | −171.39 (11) |
C17—N4—C10—N3 | 177.92 (11) | C30—C25—C26—C27 | 0.00 (19) |
C11—N4—C10—C9 | 179.78 (10) | C24—C25—C26—C27 | −179.08 (12) |
C17—N4—C10—C9 | −1.20 (18) | C25—C26—C27—C28 | −0.6 (2) |
O—C9—C10—N3 | −106.11 (13) | C26—C27—C28—C29 | 0.7 (2) |
O—C9—C10—N4 | 72.90 (14) | C27—C28—C29—C30 | −0.3 (2) |
C10—N4—C11—C12 | 179.86 (13) | C26—C25—C30—C29 | 0.43 (19) |
C17—N4—C11—C12 | 0.8 (2) | C24—C25—C30—C29 | 179.46 (13) |
C10—N4—C11—C16 | 0.63 (13) | C28—C29—C30—C25 | −0.3 (2) |
Experimental details
Crystal data | |
Chemical formula | C30H26N4O |
Mr | 458.55 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 153 |
a, b, c (Å) | 8.5477 (3), 11.8976 (5), 12.3961 (5) |
α, β, γ (°) | 101.300 (1), 92.394 (1), 107.765 (1) |
V (Å3) | 1170.28 (8) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.08 |
Crystal size (mm) | 0.58 × 0.52 × 0.19 |
Data collection | |
Diffractometer | Rigaku R-AXIS Spider diffractometer |
Absorption correction | Multi-scan (ABSCOR; Higashi, 1995) |
Tmin, Tmax | 0.955, 0.985 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 11531, 5275, 4542 |
Rint | 0.013 |
(sin θ/λ)max (Å−1) | 0.649 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.038, 0.126, 1.09 |
No. of reflections | 5275 |
No. of parameters | 317 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.50, −0.34 |
Computer programs: RAPID-AUTO (Rigaku/MSC, 2004), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
Acknowledgements
The authors acknowledge financial support and a grant from the `Qing Lan' Talent Engineering Funds and Students' Science and Technology Innovation Funds (grant No. DXS2008–040,041) of Lanzhou Jiaotong University. A grant from the Middle-Young Age Science Foundation (grant No. 3YS061-A25–023) and `Long Yuan Qing Nian' of Gansu Province is also acknowledged.
References
Higashi, T. (1995). ABSCOR. Rigaku Corporation, Tokyo, Japan. Google Scholar
Horton, D. A., Bourne, G. T. & Smythe, M. L. (2003). Chem. Rev. 103, 893–930. Web of Science CrossRef PubMed CAS Google Scholar
Navarrete-Vázquez, G., Cedillo, R., Hernández-Campos, A., Yépez, L., Hernández-Luis, F., Valdez, J., Morales, R., Cortés, R., Hernández, M. & Castillo, R. (2001). Bioorg. Med. Chem. Lett. 11, 187–190. Web of Science CrossRef PubMed Google Scholar
Rigaku/MSC (2004). RAPID-AUTO . Rigaku/MSC, The Woodlands, Texas, USA. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Benzimidazole derivatives, such as mebendazole and albendazole, are used as anthelmintic drugs. More recently, the antiprotozoal activity of 2- and 5-substituted benzimidazoles has been reported (Navarrete-Vázquez et al. 2001). The benzimidazole core is of interest because of its diverse biological activities, and it is a well known structure in medicinal chemistry (Horton et al. 2003). The molecular structure of the title compound is shown in Fig. 1. The dihedral angle between N3/N4/C10-C16 and C18-C23 is 76.79 (12)° and that between N1/N2/C1-C7 and C25-C30 is 86.10 (11)°.