organic compounds
6′-Methyl-1′,2′,3′,4′-tetrahydrospirocyclohexane-2′-quinazolin-4′-one
aSchool of Chemical Engineering and Environment, Beijing Institute of Technology, Beijing 100081, People's Republic of China
*Correspondence e-mail: jrli@bit.edu.cn
The title compound, C14H18N2O, was synthesized by the reaction of cyclohexanone and 2-amino-5-methylbenzonitrile. In the molecule, the cyclohexane ring displays a chair conformation, whereas the 1,3-diazacyclohexane moiety of the bicyclic system has a sofa conformation with the spiro C atom displaced by 0.603 (2) Å from the rest of the atoms of the 1,3-diazacyclohexane ring [planar within 0.052 (2) Å]. Molecules are linked into centrosymmetric dimers via N—H⋯O hydrogen bonds.
Related literature
For medicinal and biological properties of dihydroquinazolin-4(3H)-one derivatives, see: Jackson et al. (2007); Shi et al. (2003, 2004).
Experimental
Crystal data
|
Refinement
|
Data collection: CrystalClear (Rigaku/MSC, 2005); cell CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536809014111/ya2085sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809014111/ya2085Isup2.hkl
A solution of 2-amino-5-methylbenzonitrile (10 mmol) and zinc chloride (10 mmol) in cyclohexanone (2 ml) was refluxed for 2 h. The reaction mixture was cooled to room temperature and poured into 20 ml of water (previously cooled to 20°); it was then filtered in vacuo to give the title compound. The product was recrystallizated from ethanol to give colorless crystalline powder. m.p. 527–528 K; IR (KBr): 3367 (N—H), 3028, 2936 (C—H), 1648 (C=O) cm-1; 1H-NMR(DMSO, p.p.m.): 1.25–1.78 (10H, m), 2.35(3H, s) 6.63 (1H, m), 6.87 (1H, d), 6.91 (1H, s), 7.55 (1H, d), 8.06(1H, s). 50 mg of the obtained product was dissolved in ethyl acetate (5 ml) and the solution was kept at room temperature for 4 days to give colorless single crystals.
The H atoms bonded to C were included in the riding model approximation with C—H distances 0.95–0.99 Å, and with Uiso=1.2Ueq or 1.5Ueq (for methyl H atoms). The H atoms bonded to N were located in the difference Fourier map and refined isotropically [N1—H1 0.89 (2); N2—H2A 0.90 (2)].
Data collection: CrystalClear (Rigaku/MSC, 2005); cell
CrystalClear (Rigaku/MSC, 2005); data reduction: CrystalClear (Rigaku/MSC, 2005); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).C14H18N2O | F(000) = 496 |
Mr = 230.30 | Dx = 1.292 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 3810 reflections |
a = 9.4077 (19) Å | θ = 1.7–27.9° |
b = 11.853 (2) Å | µ = 0.08 mm−1 |
c = 11.067 (2) Å | T = 113 K |
β = 106.44 (3)° | Cube, colorless |
V = 1183.6 (4) Å3 | 0.28 × 0.24 × 0.20 mm |
Z = 4 |
Rigaku Saturn CCD area-detector diffractometer | 2810 independent reflections |
Radiation source: rotating anode | 2346 reflections with I > 2σ(I) |
Confocal monochromator | Rint = 0.034 |
Detector resolution: 7.31 pixels mm-1 | θmax = 27.9°, θmin = 2.5° |
ω and ϕ scans | h = −12→12 |
Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005) | k = −15→15 |
Tmin = 0.977, Tmax = 0.984 | l = −14→14 |
14356 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.039 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.109 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.09 | w = 1/[σ2(Fo2) + (0.0601P)2 + 0.2329P] where P = (Fo2 + 2Fc2)/3 |
2810 reflections | (Δ/σ)max = 0.003 |
163 parameters | Δρmax = 0.30 e Å−3 |
0 restraints | Δρmin = −0.26 e Å−3 |
C14H18N2O | V = 1183.6 (4) Å3 |
Mr = 230.30 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 9.4077 (19) Å | µ = 0.08 mm−1 |
b = 11.853 (2) Å | T = 113 K |
c = 11.067 (2) Å | 0.28 × 0.24 × 0.20 mm |
β = 106.44 (3)° |
Rigaku Saturn CCD area-detector diffractometer | 2810 independent reflections |
Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005) | 2346 reflections with I > 2σ(I) |
Tmin = 0.977, Tmax = 0.984 | Rint = 0.034 |
14356 measured reflections |
R[F2 > 2σ(F2)] = 0.039 | 0 restraints |
wR(F2) = 0.109 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.09 | Δρmax = 0.30 e Å−3 |
2810 reflections | Δρmin = −0.26 e Å−3 |
163 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.01942 (8) | 0.42294 (7) | 0.36579 (7) | 0.0182 (2) | |
N1 | 0.32706 (11) | 0.24403 (8) | 0.61566 (9) | 0.0167 (2) | |
N2 | 0.16255 (10) | 0.39739 (8) | 0.56703 (8) | 0.0144 (2) | |
C1 | 0.31997 (12) | 0.22860 (9) | 0.49040 (10) | 0.0153 (2) | |
C2 | 0.39770 (12) | 0.14331 (9) | 0.44884 (11) | 0.0191 (2) | |
H2 | 0.4588 | 0.0928 | 0.5078 | 0.023* | |
C3 | 0.38557 (12) | 0.13253 (9) | 0.32154 (11) | 0.0197 (2) | |
H3 | 0.4379 | 0.0736 | 0.2946 | 0.024* | |
C4 | 0.29853 (12) | 0.20585 (9) | 0.23162 (10) | 0.0180 (2) | |
C5 | 0.21867 (12) | 0.28808 (9) | 0.27333 (10) | 0.0163 (2) | |
H5 | 0.1573 | 0.3381 | 0.2139 | 0.020* | |
C6 | 0.22636 (11) | 0.29905 (9) | 0.40055 (10) | 0.0143 (2) | |
C7 | 0.12913 (11) | 0.37917 (9) | 0.44220 (10) | 0.0141 (2) | |
C8 | 0.29082 (14) | 0.19553 (11) | 0.09415 (11) | 0.0268 (3) | |
H8A | 0.2017 | 0.2339 | 0.0431 | 0.040* | |
H8B | 0.2869 | 0.1156 | 0.0707 | 0.040* | |
H8C | 0.3789 | 0.2304 | 0.0793 | 0.040* | |
C9 | 0.30268 (11) | 0.35816 (9) | 0.65516 (9) | 0.0142 (2) | |
C10 | 0.28781 (13) | 0.35125 (9) | 0.78910 (10) | 0.0176 (2) | |
H10A | 0.1961 | 0.3095 | 0.7872 | 0.021* | |
H10B | 0.3726 | 0.3080 | 0.8423 | 0.021* | |
C11 | 0.28289 (12) | 0.46671 (10) | 0.84905 (10) | 0.0192 (2) | |
H11A | 0.2840 | 0.4566 | 0.9381 | 0.023* | |
H11B | 0.1895 | 0.5055 | 0.8046 | 0.023* | |
C12 | 0.41467 (13) | 0.53975 (10) | 0.84304 (10) | 0.0215 (3) | |
H12A | 0.4071 | 0.6148 | 0.8799 | 0.026* | |
H12B | 0.5081 | 0.5040 | 0.8927 | 0.026* | |
C13 | 0.41659 (13) | 0.55324 (10) | 0.70664 (10) | 0.0204 (3) | |
H13A | 0.5013 | 0.6013 | 0.7029 | 0.024* | |
H13B | 0.3242 | 0.5906 | 0.6574 | 0.024* | |
C14 | 0.43013 (12) | 0.43771 (9) | 0.64986 (10) | 0.0169 (2) | |
H14A | 0.5257 | 0.4030 | 0.6963 | 0.020* | |
H14B | 0.4303 | 0.4474 | 0.5610 | 0.020* | |
H2A | 0.1067 (16) | 0.4493 (13) | 0.5919 (13) | 0.027 (4)* | |
H1 | 0.3942 (18) | 0.2055 (13) | 0.6744 (14) | 0.031 (4)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0160 (4) | 0.0208 (4) | 0.0164 (4) | 0.0053 (3) | 0.0024 (3) | 0.0005 (3) |
N1 | 0.0198 (5) | 0.0136 (5) | 0.0159 (5) | 0.0048 (4) | 0.0040 (4) | 0.0011 (3) |
N2 | 0.0131 (4) | 0.0143 (4) | 0.0157 (4) | 0.0030 (3) | 0.0039 (3) | −0.0006 (3) |
C1 | 0.0143 (5) | 0.0135 (5) | 0.0181 (5) | −0.0014 (4) | 0.0048 (4) | −0.0013 (4) |
C2 | 0.0187 (5) | 0.0154 (5) | 0.0226 (6) | 0.0040 (4) | 0.0045 (4) | −0.0011 (4) |
C3 | 0.0175 (5) | 0.0178 (5) | 0.0247 (6) | 0.0007 (4) | 0.0073 (4) | −0.0065 (4) |
C4 | 0.0153 (5) | 0.0199 (6) | 0.0192 (5) | −0.0034 (4) | 0.0058 (4) | −0.0052 (4) |
C5 | 0.0135 (5) | 0.0171 (5) | 0.0176 (5) | −0.0014 (4) | 0.0034 (4) | −0.0018 (4) |
C6 | 0.0124 (5) | 0.0126 (5) | 0.0178 (5) | −0.0014 (4) | 0.0042 (4) | −0.0015 (4) |
C7 | 0.0124 (5) | 0.0128 (5) | 0.0172 (5) | −0.0012 (4) | 0.0045 (4) | 0.0005 (4) |
C8 | 0.0291 (6) | 0.0327 (7) | 0.0198 (6) | 0.0046 (5) | 0.0090 (5) | −0.0052 (5) |
C9 | 0.0140 (5) | 0.0135 (5) | 0.0142 (5) | 0.0020 (4) | 0.0027 (4) | −0.0001 (4) |
C10 | 0.0207 (5) | 0.0178 (5) | 0.0148 (5) | 0.0019 (4) | 0.0056 (4) | 0.0020 (4) |
C11 | 0.0196 (5) | 0.0226 (6) | 0.0144 (5) | 0.0036 (4) | 0.0031 (4) | −0.0017 (4) |
C12 | 0.0196 (6) | 0.0231 (6) | 0.0186 (5) | 0.0002 (5) | 0.0004 (4) | −0.0059 (4) |
C13 | 0.0196 (5) | 0.0175 (6) | 0.0224 (6) | −0.0032 (4) | 0.0033 (4) | −0.0012 (4) |
C14 | 0.0140 (5) | 0.0183 (5) | 0.0180 (5) | −0.0009 (4) | 0.0042 (4) | −0.0003 (4) |
O1—C7 | 1.2472 (13) | C8—H8B | 0.9800 |
N1—C1 | 1.3810 (14) | C8—H8C | 0.9800 |
N1—C9 | 1.4596 (14) | C9—C10 | 1.5299 (14) |
N1—H1 | 0.893 (16) | C9—C14 | 1.5394 (15) |
N2—C7 | 1.3446 (13) | C10—C11 | 1.5273 (16) |
N2—C9 | 1.4757 (14) | C10—H10A | 0.9900 |
N2—H2A | 0.901 (16) | C10—H10B | 0.9900 |
C1—C2 | 1.3995 (15) | C11—C12 | 1.5289 (16) |
C1—C6 | 1.4022 (15) | C11—H11A | 0.9900 |
C2—C3 | 1.3867 (15) | C11—H11B | 0.9900 |
C2—H2 | 0.9500 | C12—C13 | 1.5232 (16) |
C3—C4 | 1.3982 (17) | C12—H12A | 0.9900 |
C3—H3 | 0.9500 | C12—H12B | 0.9900 |
C4—C5 | 1.3870 (15) | C13—C14 | 1.5269 (15) |
C4—C8 | 1.5074 (15) | C13—H13A | 0.9900 |
C5—C6 | 1.3953 (14) | C13—H13B | 0.9900 |
C5—H5 | 0.9500 | C14—H14A | 0.9900 |
C6—C7 | 1.4797 (14) | C14—H14B | 0.9900 |
C8—H8A | 0.9800 | ||
C1—N1—C9 | 117.15 (9) | N2—C9—C10 | 110.35 (9) |
C1—N1—H1 | 119.1 (10) | N1—C9—C14 | 111.48 (9) |
C9—N1—H1 | 113.2 (10) | N2—C9—C14 | 109.97 (8) |
C7—N2—C9 | 122.26 (9) | C10—C9—C14 | 110.82 (9) |
C7—N2—H2A | 115.9 (9) | C11—C10—C9 | 113.28 (9) |
C9—N2—H2A | 120.1 (9) | C11—C10—H10A | 108.9 |
N1—C1—C2 | 122.97 (10) | C9—C10—H10A | 108.9 |
N1—C1—C6 | 118.37 (10) | C11—C10—H10B | 108.9 |
C2—C1—C6 | 118.61 (10) | C9—C10—H10B | 108.9 |
C3—C2—C1 | 120.00 (10) | H10A—C10—H10B | 107.7 |
C3—C2—H2 | 120.0 | C10—C11—C12 | 111.34 (9) |
C1—C2—H2 | 120.0 | C10—C11—H11A | 109.4 |
C2—C3—C4 | 121.94 (10) | C12—C11—H11A | 109.4 |
C2—C3—H3 | 119.0 | C10—C11—H11B | 109.4 |
C4—C3—H3 | 119.0 | C12—C11—H11B | 109.4 |
C5—C4—C3 | 117.59 (10) | H11A—C11—H11B | 108.0 |
C5—C4—C8 | 121.13 (10) | C13—C12—C11 | 109.86 (9) |
C3—C4—C8 | 121.28 (10) | C13—C12—H12A | 109.7 |
C4—C5—C6 | 121.54 (10) | C11—C12—H12A | 109.7 |
C4—C5—H5 | 119.2 | C13—C12—H12B | 109.7 |
C6—C5—H5 | 119.2 | C11—C12—H12B | 109.7 |
C5—C6—C1 | 120.19 (10) | H12A—C12—H12B | 108.2 |
C5—C6—C7 | 120.94 (9) | C12—C13—C14 | 109.84 (9) |
C1—C6—C7 | 118.74 (9) | C12—C13—H13A | 109.7 |
O1—C7—N2 | 122.54 (10) | C14—C13—H13A | 109.7 |
O1—C7—C6 | 121.44 (9) | C12—C13—H13B | 109.7 |
N2—C7—C6 | 115.95 (9) | C14—C13—H13B | 109.7 |
C4—C8—H8A | 109.5 | H13A—C13—H13B | 108.2 |
C4—C8—H8B | 109.5 | C13—C14—C9 | 112.16 (9) |
H8A—C8—H8B | 109.5 | C13—C14—H14A | 109.2 |
C4—C8—H8C | 109.5 | C9—C14—H14A | 109.2 |
H8A—C8—H8C | 109.5 | C13—C14—H14B | 109.2 |
H8B—C8—H8C | 109.5 | C9—C14—H14B | 109.2 |
N1—C9—N2 | 106.31 (8) | H14A—C14—H14B | 107.9 |
N1—C9—C10 | 107.80 (8) | ||
C9—N1—C1—C2 | 152.24 (10) | C5—C6—C7—N2 | −168.95 (9) |
C9—N1—C1—C6 | −30.19 (14) | C1—C6—C7—N2 | 15.21 (14) |
N1—C1—C2—C3 | 179.98 (10) | C1—N1—C9—N2 | 51.63 (12) |
C6—C1—C2—C3 | 2.41 (16) | C1—N1—C9—C10 | 169.95 (9) |
C1—C2—C3—C4 | 0.84 (17) | C1—N1—C9—C14 | −68.21 (12) |
C2—C3—C4—C5 | −2.60 (16) | C7—N2—C9—N1 | −42.79 (13) |
C2—C3—C4—C8 | 177.80 (11) | C7—N2—C9—C10 | −159.42 (9) |
C3—C4—C5—C6 | 1.10 (16) | C7—N2—C9—C14 | 78.03 (12) |
C8—C4—C5—C6 | −179.30 (10) | N1—C9—C10—C11 | 172.15 (9) |
C4—C5—C6—C1 | 2.13 (16) | N2—C9—C10—C11 | −72.16 (11) |
C4—C5—C6—C7 | −173.64 (10) | C14—C9—C10—C11 | 49.90 (12) |
N1—C1—C6—C5 | 178.45 (9) | C9—C10—C11—C12 | −53.09 (12) |
C2—C1—C6—C5 | −3.87 (16) | C10—C11—C12—C13 | 57.52 (12) |
N1—C1—C6—C7 | −5.69 (15) | C11—C12—C13—C14 | −60.01 (12) |
C2—C1—C6—C7 | 171.99 (9) | C12—C13—C14—C9 | 58.30 (12) |
C9—N2—C7—O1 | −171.57 (10) | N1—C9—C14—C13 | −172.67 (8) |
C9—N2—C7—C6 | 11.38 (14) | N2—C9—C14—C13 | 69.67 (11) |
C5—C6—C7—O1 | 13.96 (15) | C10—C9—C14—C13 | −52.60 (11) |
C1—C6—C7—O1 | −161.87 (10) |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2A···O1i | 0.901 (16) | 2.058 (16) | 2.9563 (13) | 174.5 (13) |
Symmetry code: (i) −x, −y+1, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C14H18N2O |
Mr | 230.30 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 113 |
a, b, c (Å) | 9.4077 (19), 11.853 (2), 11.067 (2) |
β (°) | 106.44 (3) |
V (Å3) | 1183.6 (4) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.08 |
Crystal size (mm) | 0.28 × 0.24 × 0.20 |
Data collection | |
Diffractometer | Rigaku Saturn CCD area-detector diffractometer |
Absorption correction | Multi-scan (CrystalClear; Rigaku/MSC, 2005) |
Tmin, Tmax | 0.977, 0.984 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 14356, 2810, 2346 |
Rint | 0.034 |
(sin θ/λ)max (Å−1) | 0.658 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.039, 0.109, 1.09 |
No. of reflections | 2810 |
No. of parameters | 163 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.30, −0.26 |
Computer programs: CrystalClear (Rigaku/MSC, 2005), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2A···O1i | 0.901 (16) | 2.058 (16) | 2.9563 (13) | 174.5 (13) |
Symmetry code: (i) −x, −y+1, −z+1. |
Acknowledgements
The authors thank Beijing Institute of Technology for financial support.
References
Jackson, J. R., Patrick, D. R., Dar, M. M. & Huang, P. S. (2007). Nat. Rev. Cancer, 7, 107–117. Web of Science CrossRef PubMed CAS Google Scholar
Rigaku/MSC (2005). CrystalClear. Rigaku/MSC Inc., The Woodlands, Texas, USA. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Shi, D. Q., Rong, L. C., Wang, J. X., Wang, X. S., Tu, S. J. & Hu, H. W. (2004). Chem. J. Chin. Univ. 25, 2051–2053. CAS Google Scholar
Shi, D. Q., Rong, L., Wang, J., Zhuang, Q., Wang, X. & Hu, H. (2003). Tetrahedron Lett. 44, 3199–3201. Web of Science CSD CrossRef CAS Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Derivatives of dihydroquinazolin-4(3H)-one are valuable synthetic intermediates featuring common structural motif found in a variety of compounds with interesting medicinal and biological properties (Shi et al., 2004; Jackson et al., 2007).
In the molecule of the title compound (Fig. 1) the cyclohexane ring displays a regular chair conformation, whereas, the 1,3-diazacyclohexane moiety of the bicyclic system has a sofa conformation with the C9 atom displaced by 0.603 (2) Å from the rest of the atoms of the 1,3-diazacyclohexane ring (planar within 0.052 (2) Å).
Molecules in crystal are linked into centrosymmetric dimers via N2—H2A···O1i [symmetry code (i): -x, 1 - y, 1 - z] bond (Fig. 2).
The molecular geometry and overall crystal structure of the title compound are quite similar to those observed in the structure of its close analog which lacks the methyl substituent in position 6 of the tetrahydroquinazolinone system (Shi et al., 2003).