metal-organic compounds
Diaquabis[4-(dimethylamino)benzoato]-κ2O,O′;κO-(isonicotinamide-κN1)cobalt(II)
aDepartment of Physics, Hacettepe University, 06800 Beytepe, Ankara, Turkey, bDepartment of Chemistry, Faculty of Science, Anadolu University, 26470 Yenibağlar, Eskişehir, Turkey, cDepartment of Physics, Karabük University, 78050 Karabük, Turkey, and dDepartment of Chemistry, Kafkas University, 63100 Kars, Turkey
*Correspondence e-mail: merzifon@hacettepe.edu.tr
The title CoII complex, [Co(C9H10NO2)2(C6H6N2O)(H2O)2], contains two 4-dimethylaminobenzoate (DMAB) anions, one isonicotinamide (INA) ligand and two coordinated water molecules. One of the DMAB anions acts as a bidentate ligand, while the other is monodentate. The four O atoms in the equatorial plane around the Co atom form a highly distorted square-planar arrangement, while the distorted octahedral coordination geometry is completed by the N atom of the INA ligand and the O atom of the second water molecule in the axial positions. An intramolecular O—H⋯O hydrogen bond between the monodentate-coordinated carboxyl group and a coordinated water molecule results in a six-membered ring with an The dihedral angles between the carboxyl groups and the adjacent benzene rings are 4.29 (10)° for the monodentate ligand and 2.31 (13)° for the bidentate ligand, while the two benzene rings are oriented at a dihedral angle of 65.02 (5)°. The dihedral angles between the pyridine and benzene rings are 11.21 (5)° for the monodentate ligand and 74.60 (5)° for the bidentate ligand. In the intermolecular O—H⋯O, O—H⋯N and N—H⋯O hydrogen bonds link the molecules into a supramolecular structure.
Related literature
For general background, see: Adiwidjaja et al. (1978); Amiraslanov et al. (1979); Antolini et al. (1982); Antsyshkina et al. (1980); Bigoli et al. (1972); Catterick et al. (1974); Chen & Chen (2002); Hauptmann et al. (2000); Krishnamachari (1974); Shnulin et al. (1981). For related structures, see: Hökelek et al. (1995, 1997, 2007, 2008); Hökelek & Necefoğlu (1996, 1997, 2007).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2007); cell SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).
Supporting information
10.1107/S1600536809016602/xu2520sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809016602/xu2520Isup2.hkl
The title compound was prepared by the reaction of CoSO4.H2O (1.40 g, 5 mmol) in H2O (30 ml) and INA (1.22 g, 10 mmol) in H2O (20 ml) with sodium 4-dimethylaminobenzoate (1.65 g, 10 mmol) in H2O (50 ml). The mixture was filtered and set aside to crystallize at ambient temperature for one week, giving brown single crystals.
H atoms of water molecules and NH2 group were located in difference Fourier maps and refined isotropically, with restraints of O6—H61 = 0.919 (14), O6—H62 = 0.903 (16), O7—H71 = 0.910 (14), O7—H72 = 0.881 (15) Å and H61—O6—H62 = 105.6 (18) and H71—O7—H72 = 105.6 (18)°. The remaining H atoms were positioned geometrically with C—H = 0.93 and 0.96 Å, for aromatic and methyl H atoms, respectively, and constrained to ride on their parent atoms, with Uiso(H) = xUeq(C), where x = 1.5 for methyl H and x = 1.2 for aromatic H atoms.
Data collection: APEX2 (Bruker, 2007); cell
SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).Fig. 1. The molecular structure of the title molecule with the atom-numbering scheme. Displacement ellipsoids are drawn at the 50% probability level. Hydrogen bond is shown as dashed line. |
[Co(C9H10NO2)2(C6H6N2O)(H2O)2] | Z = 2 |
Mr = 545.45 | F(000) = 570 |
Triclinic, P1 | Dx = 1.456 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 6.8555 (1) Å | Cell parameters from 9963 reflections |
b = 8.1028 (2) Å | θ = 2.5–28.3° |
c = 22.4642 (3) Å | µ = 0.74 mm−1 |
α = 90.918 (1)° | T = 100 K |
β = 92.965 (2)° | Block, brown |
γ = 93.230 (2)° | 0.50 × 0.30 × 0.16 mm |
V = 1243.98 (4) Å3 |
Bruker Kappa APEXII CCD area-detector diffractometer | 6167 independent reflections |
Radiation source: fine-focus sealed tube | 5279 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.046 |
ϕ and ω scans | θmax = 28.4°, θmin = 1.8° |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | h = −9→6 |
Tmin = 0.764, Tmax = 0.884 | k = −10→10 |
21784 measured reflections | l = −27→29 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.030 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.074 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.04 | w = 1/[σ2(Fo2) + (0.033P)2 + 0.378P] where P = (Fo2 + 2Fc2)/3 |
6167 reflections | (Δ/σ)max = 0.001 |
353 parameters | Δρmax = 0.43 e Å−3 |
6 restraints | Δρmin = −0.38 e Å−3 |
[Co(C9H10NO2)2(C6H6N2O)(H2O)2] | γ = 93.230 (2)° |
Mr = 545.45 | V = 1243.98 (4) Å3 |
Triclinic, P1 | Z = 2 |
a = 6.8555 (1) Å | Mo Kα radiation |
b = 8.1028 (2) Å | µ = 0.74 mm−1 |
c = 22.4642 (3) Å | T = 100 K |
α = 90.918 (1)° | 0.50 × 0.30 × 0.16 mm |
β = 92.965 (2)° |
Bruker Kappa APEXII CCD area-detector diffractometer | 6167 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 5279 reflections with I > 2σ(I) |
Tmin = 0.764, Tmax = 0.884 | Rint = 0.046 |
21784 measured reflections |
R[F2 > 2σ(F2)] = 0.030 | 6 restraints |
wR(F2) = 0.074 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.04 | Δρmax = 0.43 e Å−3 |
6167 reflections | Δρmin = −0.38 e Å−3 |
353 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Co1 | 0.43320 (3) | 0.02268 (2) | 0.277708 (9) | 0.00947 (6) | |
O1 | 0.60678 (15) | 0.17803 (12) | 0.33279 (5) | 0.0131 (2) | |
O2 | 0.86084 (15) | 0.02285 (12) | 0.35203 (5) | 0.0149 (2) | |
O3 | 0.61788 (15) | 0.00803 (12) | 0.20163 (5) | 0.0130 (2) | |
O4 | 0.31810 (15) | −0.10110 (12) | 0.19727 (5) | 0.0131 (2) | |
O5 | −0.30534 (15) | 0.58077 (12) | 0.23291 (5) | 0.0147 (2) | |
O6 | 0.21656 (16) | −0.06931 (13) | 0.32895 (5) | 0.0148 (2) | |
H61 | 0.240 (3) | −0.141 (2) | 0.3594 (8) | 0.039 (6)* | |
H62 | 0.100 (3) | −0.028 (3) | 0.3359 (10) | 0.048 (7)* | |
O7 | 0.57303 (16) | −0.18934 (13) | 0.31208 (5) | 0.0134 (2) | |
H71 | 0.688 (2) | −0.137 (2) | 0.3264 (9) | 0.036 (6)* | |
H72 | 0.605 (3) | −0.258 (2) | 0.2840 (8) | 0.041 (6)* | |
N1 | 1.23506 (18) | 0.74180 (15) | 0.43479 (6) | 0.0133 (3) | |
N2 | 0.5720 (3) | −0.30713 (19) | −0.06317 (7) | 0.0288 (4) | |
N3 | 0.25998 (18) | 0.22383 (15) | 0.25346 (5) | 0.0107 (2) | |
N4 | −0.0640 (2) | 0.76078 (16) | 0.20689 (6) | 0.0151 (3) | |
H41 | −0.147 (3) | 0.836 (2) | 0.2044 (8) | 0.018 (5)* | |
H42 | 0.060 (3) | 0.784 (2) | 0.1996 (9) | 0.024 (5)* | |
C1 | 0.7817 (2) | 0.15986 (18) | 0.35163 (6) | 0.0112 (3) | |
C2 | 0.8986 (2) | 0.31004 (17) | 0.37515 (6) | 0.0109 (3) | |
C3 | 0.8160 (2) | 0.46310 (18) | 0.37877 (7) | 0.0134 (3) | |
H3 | 0.6851 | 0.4713 | 0.3667 | 0.016* | |
C4 | 0.9243 (2) | 0.60278 (18) | 0.39981 (7) | 0.0145 (3) | |
H4 | 0.8646 | 0.7027 | 0.4025 | 0.017* | |
C5 | 1.1227 (2) | 0.59587 (17) | 0.41723 (6) | 0.0113 (3) | |
C6 | 1.2061 (2) | 0.44248 (18) | 0.41310 (7) | 0.0136 (3) | |
H6 | 1.3376 | 0.4342 | 0.4243 | 0.016* | |
C7 | 1.0954 (2) | 0.30329 (18) | 0.39263 (7) | 0.0129 (3) | |
H7 | 1.1540 | 0.2027 | 0.3905 | 0.015* | |
C8 | 1.1348 (2) | 0.86392 (19) | 0.46908 (7) | 0.0171 (3) | |
H8A | 1.2225 | 0.9587 | 0.4781 | 0.026* | |
H8B | 1.0942 | 0.8159 | 0.5055 | 0.026* | |
H8C | 1.0223 | 0.8971 | 0.4461 | 0.026* | |
C9 | 1.4336 (2) | 0.7219 (2) | 0.45897 (9) | 0.0234 (4) | |
H9A | 1.4987 | 0.8288 | 0.4665 | 0.035* | |
H9B | 1.5039 | 0.6615 | 0.4308 | 0.035* | |
H9C | 1.4289 | 0.6624 | 0.4955 | 0.035* | |
C10 | 0.4778 (2) | −0.07098 (17) | 0.17208 (7) | 0.0115 (3) | |
C11 | 0.5002 (2) | −0.12862 (18) | 0.11039 (7) | 0.0142 (3) | |
C12 | 0.3496 (2) | −0.21833 (19) | 0.07857 (7) | 0.0180 (3) | |
H12 | 0.2317 | −0.2404 | 0.0964 | 0.022* | |
C13 | 0.3706 (3) | −0.2755 (2) | 0.02120 (8) | 0.0226 (4) | |
H13 | 0.2663 | −0.3337 | 0.0008 | 0.027* | |
C14 | 0.5478 (3) | −0.2470 (2) | −0.00686 (7) | 0.0212 (4) | |
C15 | 0.7001 (3) | −0.1550 (2) | 0.02534 (8) | 0.0221 (4) | |
H15 | 0.8189 | −0.1333 | 0.0080 | 0.027* | |
C16 | 0.6747 (2) | −0.09685 (19) | 0.08242 (7) | 0.0175 (3) | |
H16 | 0.7766 | −0.0350 | 0.1026 | 0.021* | |
C17 | 0.7573 (3) | −0.2808 (3) | −0.09026 (9) | 0.0377 (5) | |
H17A | 0.7532 | −0.3397 | −0.1278 | 0.057* | |
H17B | 0.8596 | −0.3202 | −0.0644 | 0.057* | |
H17C | 0.7824 | −0.1648 | −0.0967 | 0.057* | |
C18 | 0.4093 (3) | −0.3871 (2) | −0.09781 (8) | 0.0355 (5) | |
H18A | 0.4509 | −0.4176 | −0.1364 | 0.053* | |
H18B | 0.3058 | −0.3125 | −0.1022 | 0.053* | |
H18C | 0.3631 | −0.4844 | −0.0778 | 0.053* | |
C19 | 0.3251 (2) | 0.38257 (18) | 0.25972 (7) | 0.0127 (3) | |
H19 | 0.4555 | 0.4059 | 0.2721 | 0.015* | |
C20 | 0.2078 (2) | 0.51366 (18) | 0.24869 (7) | 0.0130 (3) | |
H20 | 0.2596 | 0.6221 | 0.2525 | 0.016* | |
C21 | 0.0118 (2) | 0.48028 (17) | 0.23182 (6) | 0.0103 (3) | |
C22 | −0.0572 (2) | 0.31584 (17) | 0.22533 (7) | 0.0114 (3) | |
H22 | −0.1879 | 0.2891 | 0.2143 | 0.014* | |
C23 | 0.0708 (2) | 0.19348 (17) | 0.23553 (7) | 0.0118 (3) | |
H23 | 0.0243 | 0.0841 | 0.2297 | 0.014* | |
C24 | −0.1314 (2) | 0.61288 (17) | 0.22363 (7) | 0.0117 (3) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Co1 | 0.00738 (11) | 0.00874 (10) | 0.01243 (11) | 0.00157 (7) | 0.00073 (7) | −0.00010 (7) |
O1 | 0.0090 (5) | 0.0130 (5) | 0.0173 (6) | 0.0029 (4) | −0.0020 (4) | −0.0014 (4) |
O2 | 0.0098 (5) | 0.0111 (5) | 0.0239 (6) | 0.0029 (4) | −0.0005 (4) | 0.0000 (4) |
O3 | 0.0104 (5) | 0.0124 (5) | 0.0160 (6) | 0.0000 (4) | 0.0006 (4) | −0.0011 (4) |
O4 | 0.0103 (5) | 0.0139 (5) | 0.0152 (6) | 0.0006 (4) | 0.0024 (4) | −0.0006 (4) |
O5 | 0.0076 (5) | 0.0121 (5) | 0.0246 (6) | 0.0011 (4) | 0.0016 (4) | −0.0013 (4) |
O6 | 0.0102 (6) | 0.0172 (5) | 0.0182 (6) | 0.0052 (4) | 0.0041 (5) | 0.0056 (4) |
O7 | 0.0101 (6) | 0.0119 (5) | 0.0185 (6) | 0.0029 (4) | 0.0006 (5) | −0.0002 (4) |
N1 | 0.0110 (6) | 0.0120 (6) | 0.0166 (7) | 0.0018 (5) | −0.0017 (5) | −0.0023 (5) |
N2 | 0.0426 (10) | 0.0311 (8) | 0.0138 (7) | 0.0097 (7) | 0.0043 (7) | −0.0034 (6) |
N3 | 0.0099 (6) | 0.0116 (6) | 0.0106 (6) | 0.0007 (5) | 0.0014 (5) | 0.0004 (5) |
N4 | 0.0078 (7) | 0.0108 (6) | 0.0270 (8) | 0.0029 (5) | 0.0003 (6) | 0.0032 (5) |
C1 | 0.0111 (7) | 0.0132 (7) | 0.0095 (7) | 0.0016 (6) | 0.0014 (6) | 0.0006 (5) |
C2 | 0.0106 (7) | 0.0130 (7) | 0.0094 (7) | 0.0010 (5) | 0.0013 (6) | 0.0011 (5) |
C3 | 0.0092 (7) | 0.0160 (7) | 0.0151 (8) | 0.0033 (6) | −0.0014 (6) | −0.0006 (6) |
C4 | 0.0138 (8) | 0.0121 (7) | 0.0179 (8) | 0.0041 (6) | 0.0006 (6) | −0.0008 (6) |
C5 | 0.0126 (7) | 0.0122 (7) | 0.0092 (7) | 0.0004 (6) | 0.0020 (6) | 0.0012 (5) |
C6 | 0.0100 (7) | 0.0155 (7) | 0.0154 (8) | 0.0026 (6) | −0.0018 (6) | 0.0015 (6) |
C7 | 0.0119 (7) | 0.0122 (7) | 0.0148 (8) | 0.0043 (6) | −0.0003 (6) | 0.0008 (6) |
C8 | 0.0209 (9) | 0.0145 (7) | 0.0159 (8) | 0.0026 (6) | 0.0009 (7) | −0.0032 (6) |
C9 | 0.0155 (8) | 0.0168 (8) | 0.0368 (11) | 0.0015 (6) | −0.0093 (8) | −0.0055 (7) |
C10 | 0.0118 (7) | 0.0080 (6) | 0.0150 (8) | 0.0027 (5) | 0.0007 (6) | 0.0019 (5) |
C11 | 0.0161 (8) | 0.0127 (7) | 0.0141 (8) | 0.0031 (6) | 0.0013 (6) | 0.0010 (6) |
C12 | 0.0164 (8) | 0.0199 (8) | 0.0177 (8) | 0.0020 (6) | 0.0016 (7) | −0.0001 (6) |
C13 | 0.0263 (10) | 0.0228 (8) | 0.0182 (9) | 0.0021 (7) | −0.0046 (7) | −0.0023 (7) |
C14 | 0.0322 (10) | 0.0190 (8) | 0.0133 (8) | 0.0090 (7) | 0.0016 (7) | 0.0016 (6) |
C15 | 0.0234 (9) | 0.0249 (9) | 0.0194 (9) | 0.0053 (7) | 0.0087 (7) | 0.0028 (7) |
C16 | 0.0187 (8) | 0.0171 (7) | 0.0171 (8) | 0.0016 (6) | 0.0025 (7) | 0.0015 (6) |
C17 | 0.0527 (14) | 0.0452 (12) | 0.0177 (10) | 0.0161 (10) | 0.0122 (9) | −0.0011 (8) |
C18 | 0.0521 (14) | 0.0385 (11) | 0.0167 (9) | 0.0174 (10) | −0.0056 (9) | −0.0080 (8) |
C19 | 0.0090 (7) | 0.0134 (7) | 0.0155 (8) | −0.0002 (6) | −0.0003 (6) | 0.0027 (6) |
C20 | 0.0116 (7) | 0.0098 (7) | 0.0175 (8) | −0.0018 (5) | 0.0002 (6) | 0.0012 (6) |
C21 | 0.0093 (7) | 0.0120 (7) | 0.0101 (7) | 0.0022 (5) | 0.0024 (6) | 0.0011 (5) |
C22 | 0.0089 (7) | 0.0128 (7) | 0.0123 (7) | −0.0002 (5) | 0.0005 (6) | −0.0001 (5) |
C23 | 0.0120 (7) | 0.0099 (7) | 0.0133 (7) | −0.0003 (5) | 0.0007 (6) | −0.0008 (5) |
C24 | 0.0116 (7) | 0.0103 (7) | 0.0132 (7) | 0.0015 (5) | −0.0010 (6) | −0.0019 (5) |
Co1—O1 | 2.0397 (10) | C7—C2 | 1.390 (2) |
Co1—O3 | 2.1845 (11) | C7—C6 | 1.382 (2) |
Co1—O4 | 2.1445 (11) | C7—H7 | 0.9300 |
Co1—O6 | 2.0410 (11) | C8—H8A | 0.9600 |
Co1—O7 | 2.1490 (10) | C8—H8B | 0.9600 |
Co1—N3 | 2.1314 (12) | C8—H8C | 0.9600 |
Co1—C10 | 2.5187 (15) | C9—H9A | 0.9600 |
O1—C1 | 1.2682 (17) | C9—H9B | 0.9600 |
O2—C1 | 1.2628 (17) | C9—H9C | 0.9600 |
O3—C10 | 1.2743 (18) | C10—C11 | 1.473 (2) |
O4—C10 | 1.2716 (18) | C11—C12 | 1.388 (2) |
O5—C24 | 1.2353 (18) | C11—C16 | 1.393 (2) |
O6—H61 | 0.919 (14) | C12—C13 | 1.380 (2) |
O6—H62 | 0.903 (16) | C12—H12 | 0.9300 |
O7—H71 | 0.910 (14) | C13—C14 | 1.407 (2) |
O7—H72 | 0.881 (15) | C13—H13 | 0.9300 |
N1—C5 | 1.4135 (18) | C15—C14 | 1.409 (3) |
N1—C8 | 1.4668 (19) | C15—H15 | 0.9300 |
N1—C9 | 1.457 (2) | C16—C15 | 1.382 (2) |
N2—C14 | 1.370 (2) | C16—H16 | 0.9300 |
N2—C17 | 1.444 (3) | C17—H17A | 0.9600 |
N2—C18 | 1.443 (3) | C17—H17B | 0.9600 |
N3—C19 | 1.3405 (19) | C17—H17C | 0.9600 |
N3—C23 | 1.3456 (19) | C18—H18A | 0.9600 |
N4—C24 | 1.3269 (19) | C18—H18B | 0.9600 |
N4—H41 | 0.857 (19) | C18—H18C | 0.9600 |
N4—H42 | 0.89 (2) | C19—H19 | 0.9300 |
C1—C2 | 1.492 (2) | C20—C19 | 1.386 (2) |
C2—C3 | 1.395 (2) | C20—C21 | 1.387 (2) |
C3—H3 | 0.9300 | C20—H20 | 0.9300 |
C4—C3 | 1.381 (2) | C22—C21 | 1.392 (2) |
C4—C5 | 1.401 (2) | C22—C23 | 1.375 (2) |
C4—H4 | 0.9300 | C22—H22 | 0.9300 |
C6—C5 | 1.401 (2) | C23—H23 | 0.9300 |
C6—H6 | 0.9300 | C24—C21 | 1.503 (2) |
O1—Co1—O3 | 100.06 (4) | C5—C4—H4 | 119.6 |
O1—Co1—O4 | 159.45 (4) | O5—C24—N4 | 122.77 (14) |
O1—Co1—O6 | 105.47 (5) | O5—C24—C21 | 119.20 (13) |
O1—Co1—O7 | 91.43 (4) | N4—C24—C21 | 118.02 (13) |
O1—Co1—N3 | 89.64 (4) | C4—C3—C2 | 121.51 (14) |
O1—Co1—C10 | 130.10 (5) | C4—C3—H3 | 119.2 |
O3—Co1—C10 | 30.39 (4) | C2—C3—H3 | 119.2 |
O4—Co1—O7 | 94.57 (4) | N1—C8—H8A | 109.5 |
O4—Co1—O3 | 60.70 (4) | N1—C8—H8B | 109.5 |
O4—Co1—C10 | 30.31 (4) | H8A—C8—H8B | 109.5 |
O6—Co1—O3 | 152.10 (4) | N1—C8—H8C | 109.5 |
O6—Co1—O4 | 94.88 (4) | H8A—C8—H8C | 109.5 |
O6—Co1—O7 | 81.01 (4) | H8B—C8—H8C | 109.5 |
O6—Co1—N3 | 90.00 (4) | C19—C20—C21 | 118.85 (13) |
O6—Co1—C10 | 124.14 (5) | C19—C20—H20 | 120.6 |
O7—Co1—O3 | 87.37 (4) | C21—C20—H20 | 120.6 |
O7—Co1—C10 | 91.22 (4) | C15—C16—C11 | 121.55 (16) |
N3—Co1—O3 | 101.34 (4) | C15—C16—H16 | 119.2 |
N3—Co1—O4 | 87.53 (4) | C11—C16—H16 | 119.2 |
N3—Co1—O7 | 170.90 (4) | C23—C22—C21 | 118.95 (14) |
N3—Co1—C10 | 95.00 (5) | C23—C22—H22 | 120.5 |
C1—O1—Co1 | 127.70 (9) | C21—C22—H22 | 120.5 |
C10—O3—Co1 | 89.46 (9) | N3—C19—C20 | 123.23 (14) |
C10—O4—Co1 | 91.35 (9) | N3—C19—H19 | 118.4 |
Co1—O7—H71 | 98.5 (13) | C20—C19—H19 | 118.4 |
Co1—O7—H72 | 113.3 (14) | C12—C13—C14 | 120.86 (16) |
H71—O7—H72 | 105.6 (18) | C12—C13—H13 | 119.6 |
Co1—O6—H61 | 122.1 (13) | C14—C13—H13 | 119.6 |
Co1—O6—H62 | 129.3 (14) | N3—C23—C22 | 123.42 (13) |
H61—O6—H62 | 105.6 (18) | N3—C23—H23 | 118.3 |
C19—N3—C23 | 117.19 (12) | C22—C23—H23 | 118.3 |
C19—N3—Co1 | 123.17 (10) | C20—C21—C22 | 118.31 (13) |
C23—N3—Co1 | 119.40 (9) | C20—C21—C24 | 123.09 (13) |
C5—N1—C9 | 116.82 (12) | C22—C21—C24 | 118.51 (13) |
C5—N1—C8 | 116.04 (12) | C4—C5—C6 | 117.65 (13) |
C9—N1—C8 | 111.97 (13) | C4—C5—N1 | 120.25 (13) |
C24—N4—H42 | 123.3 (12) | C6—C5—N1 | 121.99 (14) |
C24—N4—H41 | 116.2 (12) | C14—N2—C18 | 120.59 (16) |
H42—N4—H41 | 120.5 (17) | C14—N2—C17 | 120.27 (17) |
O4—C10—O3 | 118.49 (14) | C18—N2—C17 | 119.00 (15) |
O4—C10—C11 | 120.43 (13) | C16—C15—C14 | 120.68 (16) |
O3—C10—C11 | 121.07 (13) | C16—C15—H15 | 119.7 |
O4—C10—Co1 | 58.34 (8) | C14—C15—H15 | 119.7 |
O3—C10—Co1 | 60.14 (8) | N2—C14—C13 | 121.32 (17) |
C11—C10—Co1 | 178.69 (11) | N2—C14—C15 | 121.24 (17) |
O2—C1—O1 | 123.86 (13) | C13—C14—C15 | 117.43 (15) |
O2—C1—C2 | 118.69 (13) | N1—C9—H9A | 109.5 |
O1—C1—C2 | 117.45 (12) | N1—C9—H9B | 109.5 |
C6—C7—C2 | 121.54 (14) | H9A—C9—H9B | 109.5 |
C6—C7—H7 | 119.2 | N1—C9—H9C | 109.5 |
C2—C7—H7 | 119.2 | H9A—C9—H9C | 109.5 |
C12—C11—C16 | 117.82 (15) | H9B—C9—H9C | 109.5 |
C12—C11—C10 | 121.25 (14) | N2—C17—H17A | 109.5 |
C16—C11—C10 | 120.92 (14) | N2—C17—H17B | 109.5 |
C7—C2—C3 | 117.57 (13) | H17A—C17—H17B | 109.5 |
C7—C2—C1 | 121.09 (13) | N2—C17—H17C | 109.5 |
C3—C2—C1 | 121.31 (13) | H17A—C17—H17C | 109.5 |
C7—C6—C5 | 120.88 (14) | H17B—C17—H17C | 109.5 |
C7—C6—H6 | 119.6 | N2—C18—H18A | 109.5 |
C5—C6—H6 | 119.6 | N2—C18—H18B | 109.5 |
C13—C12—C11 | 121.64 (16) | H18A—C18—H18B | 109.5 |
C13—C12—H12 | 119.2 | N2—C18—H18C | 109.5 |
C11—C12—H12 | 119.2 | H18A—C18—H18C | 109.5 |
C3—C4—C5 | 120.84 (14) | H18B—C18—H18C | 109.5 |
C3—C4—H4 | 119.6 | ||
O1—Co1—O3—C10 | −172.09 (8) | C6—C7—C2—C3 | 0.2 (2) |
O6—Co1—O3—C10 | 31.83 (13) | C6—C7—C2—C1 | 178.40 (14) |
N3—Co1—O3—C10 | −80.42 (8) | O2—C1—C2—C7 | 5.3 (2) |
O4—Co1—O3—C10 | 0.19 (8) | O1—C1—C2—C7 | −175.29 (14) |
O7—Co1—O3—C10 | 96.92 (8) | O2—C1—C2—C3 | −176.59 (14) |
O1—Co1—O4—C10 | 21.94 (16) | O1—C1—C2—C3 | 2.8 (2) |
O6—Co1—O4—C10 | −165.93 (8) | C2—C7—C6—C5 | 0.3 (2) |
N3—Co1—O4—C10 | 104.28 (8) | C16—C11—C12—C13 | 0.3 (2) |
O7—Co1—O4—C10 | −84.59 (8) | C10—C11—C12—C13 | −178.73 (14) |
O3—Co1—O4—C10 | −0.19 (8) | C5—C4—C3—C2 | 1.3 (2) |
O6—Co1—O1—C1 | 112.48 (12) | C7—C2—C3—C4 | −1.0 (2) |
N3—Co1—O1—C1 | −157.62 (12) | C1—C2—C3—C4 | −179.19 (14) |
O4—Co1—O1—C1 | −75.66 (17) | C12—C11—C16—C15 | −1.3 (2) |
O7—Co1—O1—C1 | 31.42 (12) | C10—C11—C16—C15 | 177.74 (14) |
O3—Co1—O1—C1 | −56.16 (12) | C23—N3—C19—C20 | 0.0 (2) |
C10—Co1—O1—C1 | −61.38 (13) | Co1—N3—C19—C20 | −174.44 (11) |
O1—Co1—N3—C19 | 21.32 (12) | C21—C20—C19—N3 | 1.8 (2) |
O6—Co1—N3—C19 | 126.79 (12) | C11—C12—C13—C14 | 1.1 (2) |
O4—Co1—N3—C19 | −138.32 (12) | C19—N3—C23—C22 | −2.0 (2) |
O3—Co1—N3—C19 | −78.86 (12) | Co1—N3—C23—C22 | 172.64 (11) |
C10—Co1—N3—C19 | −108.92 (12) | C21—C22—C23—N3 | 2.2 (2) |
O1—Co1—N3—C23 | −152.97 (11) | C19—C20—C21—C22 | −1.5 (2) |
O6—Co1—N3—C23 | −47.50 (11) | C19—C20—C21—C24 | 174.91 (14) |
O4—Co1—N3—C23 | 47.38 (11) | C23—C22—C21—C20 | −0.3 (2) |
O3—Co1—N3—C23 | 106.84 (11) | C23—C22—C21—C24 | −176.92 (13) |
C10—Co1—N3—C23 | 76.79 (11) | O5—C24—C21—C20 | −150.39 (15) |
Co1—O4—C10—O3 | 0.33 (13) | N4—C24—C21—C20 | 29.2 (2) |
Co1—O4—C10—C11 | 179.46 (12) | O5—C24—C21—C22 | 26.1 (2) |
Co1—O3—C10—O4 | −0.32 (13) | N4—C24—C21—C22 | −154.32 (14) |
Co1—O3—C10—C11 | −179.45 (12) | C3—C4—C5—C6 | −0.6 (2) |
O1—Co1—C10—O4 | −170.13 (7) | C3—C4—C5—N1 | 175.64 (14) |
O6—Co1—C10—O4 | 17.01 (10) | C7—C6—C5—C4 | −0.1 (2) |
N3—Co1—C10—O4 | −76.38 (8) | C7—C6—C5—N1 | −176.35 (14) |
O7—Co1—C10—O4 | 96.97 (8) | C9—N1—C5—C4 | 172.91 (14) |
O3—Co1—C10—O4 | 179.67 (13) | C8—N1—C5—C4 | 37.38 (19) |
O1—Co1—C10—O3 | 10.20 (10) | C9—N1—C5—C6 | −11.0 (2) |
O6—Co1—C10—O3 | −162.65 (7) | C8—N1—C5—C6 | −146.50 (14) |
N3—Co1—C10—O3 | 103.95 (8) | C11—C16—C15—C14 | 0.9 (2) |
O4—Co1—C10—O3 | −179.67 (13) | C18—N2—C14—C13 | 6.5 (2) |
O7—Co1—C10—O3 | −82.70 (8) | C17—N2—C14—C13 | −177.97 (16) |
Co1—O1—C1—O2 | −19.4 (2) | C18—N2—C14—C15 | −173.96 (16) |
Co1—O1—C1—C2 | 161.23 (10) | C17—N2—C14—C15 | 1.6 (2) |
O4—C10—C11—C12 | −0.8 (2) | C12—C13—C14—N2 | 178.18 (15) |
O3—C10—C11—C12 | 178.35 (13) | C12—C13—C14—C15 | −1.4 (2) |
O4—C10—C11—C16 | −179.76 (13) | C16—C15—C14—N2 | −179.16 (15) |
O3—C10—C11—C16 | −0.6 (2) | C16—C15—C14—C13 | 0.4 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
N4—H41···O3i | 0.857 (18) | 2.189 (19) | 3.0426 (17) | 173.8 (17) |
N4—H42···O4ii | 0.88 (2) | 1.96 (2) | 2.8101 (17) | 161.9 (16) |
O6—H61···N1iii | 0.92 (2) | 1.96 (2) | 2.8494 (17) | 164 (2) |
O6—H62···O2iv | 0.90 (2) | 1.77 (2) | 2.6640 (15) | 172 (2) |
O7—H71···O2 | 0.91 (2) | 1.77 (2) | 2.6532 (15) | 161 (2) |
O7—H72···O5v | 0.88 (2) | 1.88 (2) | 2.7478 (15) | 172 (2) |
Symmetry codes: (i) x−1, y+1, z; (ii) x, y+1, z; (iii) x−1, y−1, z; (iv) x−1, y, z; (v) x+1, y−1, z. |
Experimental details
Crystal data | |
Chemical formula | [Co(C9H10NO2)2(C6H6N2O)(H2O)2] |
Mr | 545.45 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 100 |
a, b, c (Å) | 6.8555 (1), 8.1028 (2), 22.4642 (3) |
α, β, γ (°) | 90.918 (1), 92.965 (2), 93.230 (2) |
V (Å3) | 1243.98 (4) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.74 |
Crystal size (mm) | 0.50 × 0.30 × 0.16 |
Data collection | |
Diffractometer | Bruker Kappa APEXII CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.764, 0.884 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 21784, 6167, 5279 |
Rint | 0.046 |
(sin θ/λ)max (Å−1) | 0.668 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.030, 0.074, 1.04 |
No. of reflections | 6167 |
No. of parameters | 353 |
No. of restraints | 6 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.43, −0.38 |
Computer programs: APEX2 (Bruker, 2007), SAINT (Bruker, 2007), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 1997), WinGX (Farrugia, 1999).
Co1—O1 | 2.0397 (10) | Co1—O6 | 2.0410 (11) |
Co1—O3 | 2.1845 (11) | Co1—O7 | 2.1490 (10) |
Co1—O4 | 2.1445 (11) | Co1—N3 | 2.1314 (12) |
D—H···A | D—H | H···A | D···A | D—H···A |
N4—H41···O3i | 0.857 (18) | 2.189 (19) | 3.0426 (17) | 173.8 (17) |
N4—H42···O4ii | 0.88 (2) | 1.96 (2) | 2.8101 (17) | 161.9 (16) |
O6—H61···N1iii | 0.918 (17) | 1.956 (18) | 2.8494 (17) | 163.9 (17) |
O6—H62···O2iv | 0.90 (2) | 1.77 (2) | 2.6640 (15) | 172 (2) |
O7—H71···O2 | 0.914 (15) | 1.774 (16) | 2.6532 (15) | 160.5 (15) |
O7—H72···O5v | 0.879 (18) | 1.875 (18) | 2.7478 (15) | 171.6 (17) |
Symmetry codes: (i) x−1, y+1, z; (ii) x, y+1, z; (iii) x−1, y−1, z; (iv) x−1, y, z; (v) x+1, y−1, z. |
Acknowledgements
The authors are indebted to Anadolu University and to the Medicinal Plants and Medicine Research Centre of Anadolu University, Eskişehir, Turkey, for the use of the X-ray diffractometer.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Nicotinamide (NA) is one form of niacin. A deficiency of this vitamin leads to loss of copper from the body, known as pellagra disease. Victims of pellagra show unusually high serum and urinary copper levels (Krishnamachari, 1974). The nicotinic acid derivative N,N-diethylnicotinamide (DENA) is an important respiratory stimulant (Bigoli et al., 1972). Transition metal complexes with biochemical molecules show interesting physical and/or chemical properties, through which they may find applications in biological systems (Antolini et al., 1982). Some benzoic acid derivatives, such as 4-aminobenzoic acid, have been extensively reported in coordination chemistry, as bifunctional organic ligands, due to the varieties of their coordination modes (Chen & Chen, 2002; Amiraslanov et al., 1979; Hauptmann et al., 2000).
The structure–function–coordination relationships of the arylcarboxylate ion in CoII complexes of benzoic acid derivatives may also change depending on the nature and position of the substituted groups on the benzene ring, the nature of the additional ligand molecule or solvent, and the pH and temperature of synthesis, as in ZnII complexes (Shnulin et al., 1981; Antsyshkina et al., 1980; Adiwidjaja et al., 1978). When pyridine and its derivatives are used instead of water molecules, the structure is completely different (Catterick et al., 1974).
The structure determination of the title compound, (I), a cobalt complex with two 4-dimethylaminobenzoate (DMAB) and one isonicotinamide (INA) ligands and two water molecules, was undertaken in order to determine the properties of the ligands and also to compare the results obtained with those reported previously.
In the monomeric title complex, (I), the Co atom is surrounded by two DMAB and INA ligands and two water molecules. One of the DMAB ions acts as a bidentate ligand, while the other and INA are monodentate ligands (Fig. 1). The four O atoms (O1, O3, O4 and O6 atoms) in the equatorial plane around the Co atom form a highly distorted square-planar arrangement, while the distorted octahedral coordination is completed by the N atom of the INA ligand (N1) and the O atom of the water molecule (O7) in the axial positions (Table 1 and Fig. 1).
The near equality of the C1—O1 [1.2682 (17) Å], C1—O2 [1.2628 (17) Å], C10—O3 [1.2743 (18) Å] and C10—O4 [1.2716 (18) Å] bonds in the carboxylate group indicates a delocalized bonding arrangement, rather than localized single and double bonds, and may be compared with the corresponding distances: 1.256 (6) and 1.245 (6) Å in [Mn(DENA)2(C7H4ClO2)2(H2O)2], (II) (Hökelek et al., 2008), 1.265 (6) and 1.275 (6) Å in [Mn(C9H10NO2)2(H2O)4]. 2(H2O), (III) (Hökelek & Necefoğlu, 2007), 1.260 (4) and 1.252 (4) Å in [Zn(DENA)2(C7H4FO2)2(H2O)2], (IV) (Hökelek et al., 2007), 1.259 (9) and 1.273 (9) Å in Cu2(DENA)2(C6H5COO)4, (V) (Hökelek et al., 1995), 1.279 (4) and 1.246 (4) Å in [Zn2(DENA)2(C7H5O3)4]. 2H2O, (VI) (Hökelek & Necefoğlu, 1996), 1.251 (6) and 1.254 (7) Å in [Co(DENA)2(C7H5O3)2(H2O)2], (VII) (Hökelek & Necefoğlu, 1997) and 1.278 (3) and 1.246 (3) Å in [Cu(DENA)2(C7H4NO4)2(H2O)2], (VIII) (Hökelek et al., 1997). In (I), the average Co—O bond length is 2.1117 (11) Å and the Co atom is displaced out of the least-squares planes of the carboxylate groups (O1/C1/O2) and (O3/O4/C10) by -0.536 (1) Å and -0.012 (1) Å, respectively. The dihedral angle between the planar carboxylate groups and the adjacent benzene rings A (C2–C7) and B (C11–C16) are 4.29 (10)° and 2.31 (13)°, respectively, while those between rings A, B and C (N3/C19–C23) are A/B = 65.02 (5), A/C = 11.21 (5) and B/C = 74.60 (5)°. Intramolecular C—H···O hydrogen bond (Table 2) results in the formation of a six-membered ring D (Co1/O1/O2/O7/C1/H71) adopting envelope conformation, with atom Co1 displaced by 0.635 (1) Å from the plane of the other ring atoms.
In the crystal structure, strong intermolecular O—H···O, O—H···N and N—H···O hydrogen bonds (Table 2) link the molecules into a supramolecular structure, in which they may be effective in the stabilization of the structure.