organic compounds
2-Iodo-3-methoxy-6-methylpyridine
aCollege of Chemistry and Chemical Engineering, Luoyang Normal University, Luoyang 471022, People's Republic of China, bLife Science Department, Luoyang Normal University, Luoyang 471022, People's Republic of China, and cNorthwest Agriculture and Forest University, Yangling 712100, People's Republic of China
*Correspondence e-mail: dengdongsheng168@sina.com
The title compound, C7H8INO, which crystallizes with three independent molecules in the was prepared by the reaction of 3-methoxy-6-methylpyridine with KI and I2 in tetrahydrofuran solution. In the the three independent molecules are arranged in a similar orientation with the three polar methoxy groups aligned on one side and the three non-polar methyl groups on the other side. The three molecules, excluding methyl H atoms, are essentially planar, with r.m.s. deviations of 0.0141 (1), 0.0081 (1) and 0.0066 (2)Å. The three pyridine rings make dihedral angles of 58.09 (3) 66.64 (4) and 71.5 (3)°. The features rather weak intermolecular C—H⋯O hydrogen bonds, which link two molecules into dimers, and short I⋯N contacts [4.046 (3) Å].
Related literature
For C—C bond formation reactions, see: Vlad & Horvath (2002). For related structures, see: Bunker et al. (2009); Tahir et al. (2009).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2004); cell SAINT (Bruker, 2004); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008) and DIAMOND (Brandenburg, 2006); software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).
Supporting information
10.1107/S1600536809050739/bq2179sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809050739/bq2179Isup2.hkl
To a solution of 3-methoxy-6-methylpyridine (4.00 g, 30 mmol) in THF 30 ml was added 10 ml water containing 2.69 g NaHCO3 (32 mmol). The mixture was stirred for 30 minutes. Under ice bath, the resulting solution was added dropwise a solution of I2 (8.12 g, 32 mmol) and KI (5.31 g, 32 mmol) in water (75 ml). The mixture was then stirred 72 h at room temperature, and treated with 15° solution of sodium thiosulfate, then filtered. The resulting white solid was rinsed with ice water, and dried under vacuum to afford 2-iodo-3-methoxy-6-methylpyridine, 6.48 g, 89.7° yield. The crystalline compound was obtained through the slow
of ethyl acetate containing the title compound.All H atoms were positioned geometrically and treated as riding, with C—H bond lengths constrained to 0.93 Å (aromatic CH), 0.96 Å (methyl CH3), and with Uĩso~(H) = 1.2Ueq(C) or 1.5Ueq(methyl).
Data collection: APEX2 (Bruker, 2004); cell
SAINT (Bruker, 2004); data reduction: SAINT (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008) and DIAMOND (Brandenburg, 2006); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).C7H8INO | Z = 6 |
Mr = 249.04 | F(000) = 708 |
Triclinic, P1 | Dx = 1.938 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 7.7974 (9) Å | Cell parameters from 3296 reflections |
b = 10.8302 (12) Å | θ = 2.7–23.1° |
c = 16.2898 (18) Å | µ = 3.69 mm−1 |
α = 106.093 (1)° | T = 296 K |
β = 90.633 (1)° | Block, colorless |
γ = 103.636 (1)° | 0.20 × 0.14 × 0.13 mm |
V = 1280.2 (2) Å3 |
Bruker APEXII CCD diffractometer | 4737 independent reflections |
Radiation source: fine-focus sealed tube | 3719 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.026 |
phi and ω scans | θmax = 25.5°, θmin = 2.6° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −9→9 |
Tmin = 0.526, Tmax = 0.646 | k = −12→13 |
9886 measured reflections | l = −19→19 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.029 | H-atom parameters constrained |
wR(F2) = 0.062 | w = 1/[σ2(Fo2) + (0.0183P)2 + 0.8733P] where P = (Fo2 + 2Fc2)/3 |
S = 1.01 | (Δ/σ)max = 0.001 |
4737 reflections | Δρmax = 0.56 e Å−3 |
278 parameters | Δρmin = −0.68 e Å−3 |
0 restraints | Extinction correction: SHELXS97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0067 (3) |
C7H8INO | γ = 103.636 (1)° |
Mr = 249.04 | V = 1280.2 (2) Å3 |
Triclinic, P1 | Z = 6 |
a = 7.7974 (9) Å | Mo Kα radiation |
b = 10.8302 (12) Å | µ = 3.69 mm−1 |
c = 16.2898 (18) Å | T = 296 K |
α = 106.093 (1)° | 0.20 × 0.14 × 0.13 mm |
β = 90.633 (1)° |
Bruker APEXII CCD diffractometer | 4737 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 3719 reflections with I > 2σ(I) |
Tmin = 0.526, Tmax = 0.646 | Rint = 0.026 |
9886 measured reflections |
R[F2 > 2σ(F2)] = 0.029 | 0 restraints |
wR(F2) = 0.062 | H-atom parameters constrained |
S = 1.01 | Δρmax = 0.56 e Å−3 |
4737 reflections | Δρmin = −0.68 e Å−3 |
278 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.2655 (6) | 0.5314 (4) | 0.5640 (3) | 0.0522 (10) | |
C2 | 0.3438 (6) | 0.6096 (5) | 0.5130 (3) | 0.0581 (11) | |
C3 | 0.3160 (7) | 0.5495 (6) | 0.4251 (3) | 0.0776 (15) | |
H3 | 0.3633 | 0.5957 | 0.3870 | 0.093* | |
C4 | 0.2179 (7) | 0.4212 (6) | 0.3958 (3) | 0.0801 (15) | |
H4 | 0.2010 | 0.3797 | 0.3371 | 0.096* | |
C5 | 0.1440 (6) | 0.3525 (5) | 0.4509 (3) | 0.0652 (13) | |
C6 | 0.0322 (8) | 0.2131 (5) | 0.4196 (3) | 0.0905 (17) | |
H6A | 0.0896 | 0.1550 | 0.4380 | 0.136* | |
H6B | 0.0167 | 0.1866 | 0.3581 | 0.136* | |
H6C | −0.0813 | 0.2084 | 0.4425 | 0.136* | |
C7 | 0.5208 (8) | 0.8131 (5) | 0.4975 (4) | 0.0900 (17) | |
H7A | 0.5924 | 0.7653 | 0.4600 | 0.135* | |
H7B | 0.5938 | 0.8961 | 0.5321 | 0.135* | |
H7C | 0.4311 | 0.8294 | 0.4639 | 0.135* | |
C8 | 0.5213 (6) | 0.3742 (4) | 0.0739 (2) | 0.0479 (10) | |
C9 | 0.6383 (6) | 0.4983 (4) | 0.0899 (3) | 0.0500 (10) | |
C10 | 0.5793 (7) | 0.6050 (4) | 0.1397 (3) | 0.0627 (12) | |
H10 | 0.6521 | 0.6906 | 0.1541 | 0.075* | |
C11 | 0.4127 (7) | 0.5816 (5) | 0.1669 (3) | 0.0671 (13) | |
H11 | 0.3725 | 0.6521 | 0.2004 | 0.081* | |
C12 | 0.3034 (6) | 0.4552 (5) | 0.1456 (3) | 0.0596 (11) | |
C13 | 0.1181 (7) | 0.4251 (5) | 0.1713 (3) | 0.0791 (15) | |
H13A | 0.0364 | 0.4120 | 0.1233 | 0.119* | |
H13B | 0.1029 | 0.4979 | 0.2176 | 0.119* | |
H13C | 0.0959 | 0.3460 | 0.1894 | 0.119* | |
C14 | 0.9152 (7) | 0.6345 (4) | 0.0738 (3) | 0.0765 (15) | |
H14A | 0.8591 | 0.6908 | 0.0527 | 0.115* | |
H14B | 1.0216 | 0.6276 | 0.0458 | 0.115* | |
H14C | 0.9438 | 0.6715 | 0.1345 | 0.115* | |
C15 | 0.1107 (5) | 0.9067 (4) | 0.2665 (2) | 0.0450 (9) | |
C16 | 0.2909 (5) | 0.9519 (4) | 0.2630 (3) | 0.0483 (10) | |
C17 | 0.3429 (6) | 1.0324 (4) | 0.2107 (3) | 0.0624 (12) | |
H17 | 0.4627 | 1.0660 | 0.2063 | 0.075* | |
C18 | 0.2179 (7) | 1.0628 (4) | 0.1653 (3) | 0.0646 (12) | |
H18 | 0.2528 | 1.1183 | 0.1308 | 0.077* | |
C19 | 0.0416 (6) | 1.0116 (4) | 0.1705 (3) | 0.0594 (11) | |
C20 | −0.1023 (7) | 1.0386 (6) | 0.1207 (4) | 0.0880 (17) | |
H20A | −0.1829 | 0.9561 | 0.0903 | 0.132* | |
H20B | −0.0505 | 1.0840 | 0.0807 | 0.132* | |
H20C | −0.1652 | 1.0928 | 0.1596 | 0.132* | |
C21 | 0.5866 (6) | 0.9547 (5) | 0.3028 (4) | 0.0871 (17) | |
H21A | 0.6098 | 0.9276 | 0.2436 | 0.131* | |
H21B | 0.6499 | 0.9151 | 0.3351 | 0.131* | |
H21C | 0.6248 | 1.0495 | 0.3247 | 0.131* | |
I1 | 0.30556 (5) | 0.61072 (3) | 0.698542 (19) | 0.07157 (13) | |
I2 | 0.60344 (4) | 0.20520 (3) | 0.00399 (2) | 0.06819 (12) | |
I3 | 0.01400 (4) | 0.78330 (3) | 0.344715 (19) | 0.05933 (11) | |
N1 | 0.1683 (5) | 0.4079 (4) | 0.5349 (2) | 0.0568 (9) | |
N2 | 0.3602 (5) | 0.3508 (3) | 0.0991 (2) | 0.0538 (9) | |
N3 | −0.0123 (4) | 0.9329 (3) | 0.2220 (2) | 0.0526 (9) | |
O1 | 0.4377 (4) | 0.7353 (3) | 0.5523 (2) | 0.0727 (9) | |
O2 | 0.7978 (4) | 0.5059 (3) | 0.05666 (19) | 0.0619 (8) | |
O3 | 0.3999 (4) | 0.9124 (3) | 0.3106 (2) | 0.0648 (8) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.059 (3) | 0.060 (3) | 0.043 (2) | 0.024 (2) | 0.006 (2) | 0.016 (2) |
C2 | 0.058 (3) | 0.071 (3) | 0.058 (3) | 0.027 (2) | 0.010 (2) | 0.028 (2) |
C3 | 0.080 (4) | 0.103 (4) | 0.060 (3) | 0.028 (3) | 0.011 (3) | 0.036 (3) |
C4 | 0.096 (4) | 0.098 (4) | 0.043 (3) | 0.029 (4) | 0.001 (3) | 0.012 (3) |
C5 | 0.065 (3) | 0.071 (3) | 0.056 (3) | 0.024 (3) | −0.006 (2) | 0.005 (2) |
C6 | 0.106 (4) | 0.082 (4) | 0.069 (3) | 0.022 (3) | −0.012 (3) | 0.000 (3) |
C7 | 0.091 (4) | 0.091 (4) | 0.104 (4) | 0.014 (3) | 0.018 (3) | 0.061 (4) |
C8 | 0.062 (3) | 0.040 (2) | 0.045 (2) | 0.017 (2) | −0.005 (2) | 0.0143 (18) |
C9 | 0.061 (3) | 0.042 (2) | 0.046 (2) | 0.013 (2) | −0.008 (2) | 0.0104 (19) |
C10 | 0.081 (3) | 0.043 (2) | 0.060 (3) | 0.016 (2) | 0.002 (3) | 0.008 (2) |
C11 | 0.092 (4) | 0.058 (3) | 0.058 (3) | 0.034 (3) | 0.009 (3) | 0.014 (2) |
C12 | 0.065 (3) | 0.069 (3) | 0.056 (3) | 0.028 (3) | 0.005 (2) | 0.026 (2) |
C13 | 0.076 (4) | 0.100 (4) | 0.074 (3) | 0.035 (3) | 0.017 (3) | 0.035 (3) |
C14 | 0.079 (4) | 0.053 (3) | 0.079 (3) | −0.005 (3) | 0.003 (3) | 0.008 (3) |
C15 | 0.046 (2) | 0.035 (2) | 0.050 (2) | 0.0075 (18) | 0.0084 (19) | 0.0084 (18) |
C16 | 0.045 (2) | 0.039 (2) | 0.058 (3) | 0.0087 (19) | 0.004 (2) | 0.0093 (19) |
C17 | 0.052 (3) | 0.047 (3) | 0.083 (3) | 0.003 (2) | 0.017 (2) | 0.017 (2) |
C18 | 0.068 (3) | 0.052 (3) | 0.077 (3) | 0.006 (2) | 0.015 (3) | 0.032 (2) |
C19 | 0.069 (3) | 0.050 (3) | 0.058 (3) | 0.011 (2) | 0.002 (2) | 0.017 (2) |
C20 | 0.083 (4) | 0.095 (4) | 0.098 (4) | 0.016 (3) | −0.008 (3) | 0.054 (3) |
C21 | 0.047 (3) | 0.090 (4) | 0.128 (5) | 0.012 (3) | 0.003 (3) | 0.041 (4) |
I1 | 0.0894 (3) | 0.0652 (2) | 0.04841 (18) | 0.00163 (17) | 0.00875 (16) | 0.01222 (15) |
I2 | 0.0630 (2) | 0.03952 (17) | 0.0968 (3) | 0.01431 (14) | 0.00303 (17) | 0.01007 (16) |
I3 | 0.05512 (19) | 0.0623 (2) | 0.0677 (2) | 0.01301 (14) | 0.01072 (14) | 0.03120 (15) |
N1 | 0.064 (2) | 0.057 (2) | 0.050 (2) | 0.0183 (19) | 0.0019 (18) | 0.0131 (18) |
N2 | 0.057 (2) | 0.056 (2) | 0.057 (2) | 0.0195 (18) | 0.0023 (18) | 0.0244 (18) |
N3 | 0.049 (2) | 0.045 (2) | 0.061 (2) | 0.0090 (16) | 0.0021 (17) | 0.0147 (17) |
O1 | 0.079 (2) | 0.066 (2) | 0.076 (2) | 0.0091 (18) | 0.0111 (18) | 0.0331 (18) |
O2 | 0.0599 (19) | 0.0423 (16) | 0.0701 (19) | 0.0027 (14) | 0.0029 (16) | 0.0033 (14) |
O3 | 0.0402 (16) | 0.069 (2) | 0.087 (2) | 0.0107 (15) | 0.0047 (15) | 0.0270 (17) |
C1—N1 | 1.323 (5) | C12—N2 | 1.348 (5) |
C1—C2 | 1.392 (6) | C12—C13 | 1.496 (6) |
C1—I1 | 2.110 (4) | C13—H13A | 0.9600 |
C2—O1 | 1.355 (5) | C13—H13B | 0.9600 |
C2—C3 | 1.390 (6) | C13—H13C | 0.9600 |
C3—C4 | 1.366 (7) | C14—O2 | 1.426 (5) |
C3—H3 | 0.9300 | C14—H14A | 0.9600 |
C4—C5 | 1.368 (7) | C14—H14B | 0.9600 |
C4—H4 | 0.9300 | C14—H14C | 0.9600 |
C5—N1 | 1.324 (5) | C15—N3 | 1.324 (5) |
C5—C6 | 1.497 (7) | C15—C16 | 1.382 (5) |
C6—H6A | 0.9600 | C15—I3 | 2.114 (4) |
C6—H6B | 0.9600 | C16—O3 | 1.359 (5) |
C6—H6C | 0.9600 | C16—C17 | 1.380 (6) |
C7—O1 | 1.449 (5) | C17—C18 | 1.369 (6) |
C7—H7A | 0.9600 | C17—H17 | 0.9300 |
C7—H7B | 0.9600 | C18—C19 | 1.369 (6) |
C7—H7C | 0.9600 | C18—H18 | 0.9300 |
C8—N2 | 1.315 (5) | C19—N3 | 1.357 (5) |
C8—C9 | 1.389 (5) | C19—C20 | 1.506 (6) |
C8—I2 | 2.115 (4) | C20—H20A | 0.9600 |
C9—O2 | 1.356 (5) | C20—H20B | 0.9600 |
C9—C10 | 1.394 (6) | C20—H20C | 0.9600 |
C10—C11 | 1.367 (6) | C21—O3 | 1.438 (5) |
C10—H10 | 0.9300 | C21—H21A | 0.9600 |
C11—C12 | 1.379 (6) | C21—H21B | 0.9600 |
C11—H11 | 0.9300 | C21—H21C | 0.9600 |
N1—C1—C2 | 125.0 (4) | H13A—C13—H13B | 109.5 |
N1—C1—I1 | 116.1 (3) | C12—C13—H13C | 109.5 |
C2—C1—I1 | 118.9 (3) | H13A—C13—H13C | 109.5 |
O1—C2—C3 | 126.1 (4) | H13B—C13—H13C | 109.5 |
O1—C2—C1 | 118.2 (4) | O2—C14—H14A | 109.5 |
C3—C2—C1 | 115.6 (5) | O2—C14—H14B | 109.5 |
C4—C3—C2 | 118.8 (5) | H14A—C14—H14B | 109.5 |
C4—C3—H3 | 120.6 | O2—C14—H14C | 109.5 |
C2—C3—H3 | 120.6 | H14A—C14—H14C | 109.5 |
C3—C4—C5 | 121.4 (5) | H14B—C14—H14C | 109.5 |
C3—C4—H4 | 119.3 | N3—C15—C16 | 124.5 (4) |
C5—C4—H4 | 119.3 | N3—C15—I3 | 115.2 (3) |
N1—C5—C4 | 120.8 (5) | C16—C15—I3 | 120.3 (3) |
N1—C5—C6 | 117.3 (5) | O3—C16—C17 | 126.2 (4) |
C4—C5—C6 | 122.0 (5) | O3—C16—C15 | 117.2 (4) |
C5—C6—H6A | 109.5 | C17—C16—C15 | 116.6 (4) |
C5—C6—H6B | 109.5 | C18—C17—C16 | 119.8 (4) |
H6A—C6—H6B | 109.5 | C18—C17—H17 | 120.1 |
C5—C6—H6C | 109.5 | C16—C17—H17 | 120.1 |
H6A—C6—H6C | 109.5 | C19—C18—C17 | 120.2 (4) |
H6B—C6—H6C | 109.5 | C19—C18—H18 | 119.9 |
O1—C7—H7A | 109.5 | C17—C18—H18 | 119.9 |
O1—C7—H7B | 109.5 | N3—C19—C18 | 120.8 (4) |
H7A—C7—H7B | 109.5 | N3—C19—C20 | 116.4 (4) |
O1—C7—H7C | 109.5 | C18—C19—C20 | 122.8 (4) |
H7A—C7—H7C | 109.5 | C19—C20—H20A | 109.5 |
H7B—C7—H7C | 109.5 | C19—C20—H20B | 109.5 |
N2—C8—C9 | 125.6 (4) | H20A—C20—H20B | 109.5 |
N2—C8—I2 | 115.6 (3) | C19—C20—H20C | 109.5 |
C9—C8—I2 | 118.8 (3) | H20A—C20—H20C | 109.5 |
O2—C9—C8 | 118.2 (4) | H20B—C20—H20C | 109.5 |
O2—C9—C10 | 125.8 (4) | O3—C21—H21A | 109.5 |
C8—C9—C10 | 116.0 (4) | O3—C21—H21B | 109.5 |
C11—C10—C9 | 118.9 (4) | H21A—C21—H21B | 109.5 |
C11—C10—H10 | 120.6 | O3—C21—H21C | 109.5 |
C9—C10—H10 | 120.6 | H21A—C21—H21C | 109.5 |
C10—C11—C12 | 121.0 (4) | H21B—C21—H21C | 109.5 |
C10—C11—H11 | 119.5 | C1—N1—C5 | 118.3 (4) |
C12—C11—H11 | 119.5 | C8—N2—C12 | 117.8 (4) |
N2—C12—C11 | 120.6 (4) | C15—N3—C19 | 118.0 (4) |
N2—C12—C13 | 116.3 (4) | C2—O1—C7 | 116.9 (4) |
C11—C12—C13 | 123.1 (4) | C9—O2—C14 | 117.1 (3) |
C12—C13—H13A | 109.5 | C16—O3—C21 | 116.5 (4) |
C12—C13—H13B | 109.5 | ||
N1—C1—C2—O1 | 179.0 (4) | C15—C16—C17—C18 | −0.4 (6) |
I1—C1—C2—O1 | −2.2 (5) | C16—C17—C18—C19 | −1.1 (7) |
N1—C1—C2—C3 | −0.6 (7) | C17—C18—C19—N3 | 1.5 (7) |
I1—C1—C2—C3 | 178.2 (3) | C17—C18—C19—C20 | −178.5 (5) |
O1—C2—C3—C4 | 179.9 (5) | C2—C1—N1—C5 | 0.8 (6) |
C1—C2—C3—C4 | −0.5 (7) | I1—C1—N1—C5 | −178.0 (3) |
C2—C3—C4—C5 | 1.5 (8) | C4—C5—N1—C1 | 0.1 (7) |
C3—C4—C5—N1 | −1.3 (8) | C6—C5—N1—C1 | −179.5 (4) |
C3—C4—C5—C6 | 178.4 (5) | C9—C8—N2—C12 | −1.1 (6) |
N2—C8—C9—O2 | −177.6 (4) | I2—C8—N2—C12 | 178.5 (3) |
I2—C8—C9—O2 | 2.8 (5) | C11—C12—N2—C8 | −1.1 (6) |
N2—C8—C9—C10 | 2.5 (6) | C13—C12—N2—C8 | 178.6 (4) |
I2—C8—C9—C10 | −177.2 (3) | C16—C15—N3—C19 | −1.5 (6) |
O2—C9—C10—C11 | 178.5 (4) | I3—C15—N3—C19 | −180.0 (3) |
C8—C9—C10—C11 | −1.6 (6) | C18—C19—N3—C15 | −0.3 (6) |
C9—C10—C11—C12 | −0.4 (7) | C20—C19—N3—C15 | 179.8 (4) |
C10—C11—C12—N2 | 1.8 (7) | C3—C2—O1—C7 | −1.8 (7) |
C10—C11—C12—C13 | −177.9 (4) | C1—C2—O1—C7 | 178.7 (4) |
N3—C15—C16—O3 | −177.8 (3) | C8—C9—O2—C14 | 179.8 (4) |
I3—C15—C16—O3 | 0.7 (5) | C10—C9—O2—C14 | −0.3 (6) |
N3—C15—C16—C17 | 1.8 (6) | C17—C16—O3—C21 | −2.6 (6) |
I3—C15—C16—C17 | −179.7 (3) | C15—C16—O3—C21 | 177.0 (4) |
O3—C16—C17—C18 | 179.1 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
C14—H14B···O2i | 0.96 | 2.56 | 3.429 (6) | 151 |
Symmetry code: (i) −x+2, −y+1, −z. |
Experimental details
Crystal data | |
Chemical formula | C7H8INO |
Mr | 249.04 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 296 |
a, b, c (Å) | 7.7974 (9), 10.8302 (12), 16.2898 (18) |
α, β, γ (°) | 106.093 (1), 90.633 (1), 103.636 (1) |
V (Å3) | 1280.2 (2) |
Z | 6 |
Radiation type | Mo Kα |
µ (mm−1) | 3.69 |
Crystal size (mm) | 0.20 × 0.14 × 0.13 |
Data collection | |
Diffractometer | Bruker APEXII CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.526, 0.646 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 9886, 4737, 3719 |
Rint | 0.026 |
(sin θ/λ)max (Å−1) | 0.606 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.029, 0.062, 1.01 |
No. of reflections | 4737 |
No. of parameters | 278 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.56, −0.68 |
Computer programs: APEX2 (Bruker, 2004), SAINT (Bruker, 2004), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008) and DIAMOND (Brandenburg, 2006), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
C14—H14B···O2i | 0.96 | 2.56 | 3.429 (6) | 151 |
Symmetry code: (i) −x+2, −y+1, −z. |
Acknowledgements
This work was supported by the Doctoral Foundation and Cultivatable Foundation (2008-PYJJ-011) of Luoyang Normal University.
References
Brandenburg, K. (2006). DIAMOND. Crystal Impact GbR, Bonn, Germany. Google Scholar
Bruker (2004). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Bunker, K. D., Sach, N. W., Nukui, S., Rheingold, A. L. & Yanovsky, A. (2009). Acta Cryst. E65, o28. Web of Science CSD CrossRef IUCr Journals Google Scholar
Sheldrick, G. M. (1996). SADABS. University of Göttingen, Germany. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef IUCr Journals Google Scholar
Spek, A. L. (2009). Acta Cryst. D65, 148–155. Web of Science CrossRef IUCr Journals Google Scholar
Tahir, M. N., Arshad, M. N., Khan, I. U. & Shafiq, M. (2009). Acta Cryst. E65, o535. Web of Science CSD CrossRef IUCr Journals Google Scholar
Vlad, G. & Horvath, I. T. (2002). J. Org. Chem. 67, 6550–6552. Web of Science CrossRef PubMed CAS Google Scholar
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As is known, the Ullmann coupling reaction is an important C—C bond formation reaction. In this reaction, the halogen derivatives of aromatic compounds have been used as its reaction substrates (Vlad & Horvath. 2002). The reaction of 3-methoxy-6-methylpyridine with KI and I2 in the presence of NaHCO3 leads to iodo-substitution at position 2 of the pyridine ring with similar structure to the previous compound (Bunker et al. 2009), as shown by the X-ray study of the title compound (Fig. 1).
The asymmetric unit consists of three neutral C7H8INO molecules, in which the bond lengths and angles are within normal ranges (Bunker et al. 2009; Tahir et al. 2009). In the crystal structure, the three molecules are arranged in the similar orientation with the three polar methoxy groups aligning on one side and the three non-polar methyl groups siding on the other side. The pyridine ring 1 (C1-C5/N1) forms dihedral angles of 58.09 (3)° and 66.64 (4)°, respectively, with the pyridine ring 2 (C8-C12/N2) and the pyridine ring 3 (C15-19/N3). Rings 2 and 3 form a dihedral angle of 71.5 (3)°. Furthermore, the organic molecules, excluding methyl H atoms, are essentially planar, with r.m.s. deviations of 0.0141 (1), 0.0081 (1) and 0.0066 (2) Å. There are no strong halogen···halogen interactions in the structure, the shortest intermolecular I—I distances are 4.266 (2)Å. However, intermolecular C—H···O hydrogen bonds link the molecules into dimers, in which C14—H14B is donor and O2 is acceptor (Table 1, Fig. 2). This weak contacts may be effective in the stabilization of the structure.