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ISSN: 2056-9890

2-Meth­­oxy-3-[(3,4,5-tri­meth­oxy­anilino)methyl­­idene]-3,4-di­hydro-2H-1-benzo­pyran-4-one

aDepartment of Crystallography and Crystal Chemistry, University of Łódź, Pomorska 149/153, PL-90236 Łódź, Poland, and bDepartment of Cosmetic Raw Materials Chemistry, Faculty of Pharmacy, Medical University of Łódź, Muszyńskiego 1, PL-90151 Łódź, Poland
*Correspondence e-mail: malecka@uni.lodz.pl

(Received 9 December 2009; accepted 21 December 2009; online 24 December 2009)

The title mol­ecule, C20H21NO6, adopts a keto–amine tautomeric form. An intra­molecular N—H⋯O hydrogen bond, classified as a resonanse-assisted hydrogen bond, influences the mol­ecular conformation; the two benzene rings form a dihedral angle of 24.6 (1)°. In the crystal structure, weak inter­molecular C—H⋯O hydrogen bonds link mol­ecules into chains propagating along [001].

Related literature

For the biological propertries of similar structures, see: Khan et al. (2009[Khan, K. M., Ambreen, N., Hussain, S., Perveen, S. & Choudhary, M. I. (2009). Bioorg. Med. Chem. 17, 2983-2988.]). For related structures, see: Gilli et al. (1994[Gilli, P., Bertolasi, V., Ferretti, V. & Gilli, G. (1994). J. Am. Chem. Soc. 116, 909-915.]); Bertolasi et al. (1998[Bertolasi, V., Gilli, P., Ferretti, V. & Gilli, G. (1998). Acta Cryst. B54, 50-65.]); Małecka & Budzisz (2006[Małecka, M. & Budzisz, E. (2006). Acta Cryst. E62, o5058-o5060.]); Małecka (2007[Małecka, M. (2007). J. Mol. Struct. 831, 135-143.]).

[Scheme 1]

Experimental

Crystal data
  • C20H21NO6

  • Mr = 371.38

  • Monoclinic, P 21 /c

  • a = 11.6145 (6) Å

  • b = 20.8689 (9) Å

  • c = 7.3728 (5) Å

  • β = 94.533 (5)°

  • V = 1781.44 (17) Å3

  • Z = 4

  • Cu Kα radiation

  • μ = 0.86 mm−1

  • T = 100 K

  • 0.2 × 0.05 × 0.03 mm

Data collection
  • Oxford Diffraction Gemini E Ultra diffractometer

  • Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2009[Oxford Diffraction (2009). CrysAlis CCD and CrysAlis RED. Oxford Diffraction Ltd, Yarnton, England.]) Tmin = 0.844, Tmax = 1.000

  • 7511 measured reflections

  • 2862 independent reflections

  • 2344 reflections with I > 2σ(I)

  • Rint = 0.024

  • Standard reflections: 0

Refinement
  • R[F2 > 2σ(F2)] = 0.037

  • wR(F2) = 0.101

  • S = 1.05

  • 2862 reflections

  • 248 parameters

  • H-atom parameters constrained

  • Δρmax = 0.38 e Å−3

  • Δρmin = −0.22 e Å−3

Table 1
Hydrogen-bond geometry (Å, °)

D—H⋯A D—H H⋯A DA D—H⋯A
N1—H1⋯O4 0.88 2.00 2.661 (2) 131
C14—H14A⋯O4i 0.98 2.48 3.414 (2) 160
Symmetry code: (i) [x, -y+{\script{1\over 2}}, z-{\script{1\over 2}}].

Data collection: CrysAlis CCD (Oxford Diffraction, 2009[Oxford Diffraction (2009). CrysAlis CCD and CrysAlis RED. Oxford Diffraction Ltd, Yarnton, England.]); cell refinement: CrysAlis RED (Oxford Diffraction, 2009[Oxford Diffraction (2009). CrysAlis CCD and CrysAlis RED. Oxford Diffraction Ltd, Yarnton, England.]); data reduction: CrysAlis RED; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008[Sheldrick, G. M. (2008). Acta Cryst. A64, 112-122.]); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008[Sheldrick, G. M. (2008). Acta Cryst. A64, 112-122.]); molecular graphics: PLATON (Spek, 2009[Spek, A. L. (2009). Acta Cryst. D65, 148-155.]); software used to prepare material for publication: PLATON.

Supporting information


Comment top

The present paper is a continuation of X-ray studies of a group of chromone derivatives (Małecka & Budzisz, 2006, Małecka, 2007). Due to their biological activity (Khan et al., 2009) and the presence of intramolecular N—H···O hydrogen bond which could be classified as resonanse assisted hydrogen bond (RAHB) (Gilli et al., 1994).

The more detailed insight into the molecular structure of the title compound shows that N—H···O hydrogen bond (Table 1) may be classified as resonance assisted hydrogen bond (RAHB). Such interactions RAHB have been investigated for homonuclear O—H···O interactions and for heteronuclear N—H···O RAHBs (Bertolasi et al., 1998).

Considering O4C4—C3C31—N1—H1 fragment it is not observed the equalization of C4—C3 and C3C31 in comparison to previuos examined structures However, it was found the elongation and shortening of C4O4 and C3—N1 bonds, respectively. The π- electron delocalization effect is not so evident as in earlier investigated structures. It is associated with lack of the planarity and non-aromatic character of main part of molecule.

The packing of the molecules in the crystal lattice is stabilized via C—H···O hydrogen bonds (Table 1). Atom C14 is involved in a weak C—H···O intermolecular interaction with atom O4 related by symmetry x, 1/2 - y, -1/2 + z what results in forming chains C(11) along c axis.

The six-memebered pyrone ring adopts HC conformation, what confirm the Cremer & Pople parameters QT= 0.396 (1) Å, ϕ2= 62.3 (2)°, θ2= 39.8 (3)°.

Bonds distances and angles are in a good agreement with expected values.

Related literature top

For the biological propertries of similar structures, see: Khan et al. (2009). For related structures, see: Gilli et al. (1994); Bertolasi et al. (1998); Małecka & Budzisz (2006); Małecka (2007).

Experimental top

4-Oxo-4H-1-benzopyran-3-carboxaldehyde (0.348 g, 0.002 mol) was dissolved in hot toluene (20 ml) together with a small amount of p-toluenesulphonic acid as a catalyst. Resulting solution was kept under reflux while the solution of 3,4,5-trimethoxyaniline (0.366 g, 0.002 mol) in toluene (20 ml) was slowly added. When the addition was finished, the solution was kept under reflux for following 3 h. Then it was left in room temperature for 24 h. Approximately half of the solvent was removed under reduced pressure and resulting solution was left in the refrigerator for 48 h. Obtained precipitate was filtered off, added to 30 ml of methanol and refluxed for 30 minutes. The hot solution was filtered off to remove insolubilities. Then it was left in room temperature for 2 h. Approximately half of the solvent was removed under reduced pressure. Next the solution was left in the refrigerator for 4 days. Resulting precipitate was filtered off, washed with small amount of methanol and diethyl ether and dried under reduced pressure.

Refinement top

All H-atoms were positioned geometrically and refined with a riding model; for methyl H atoms Uiso were constrained to be 1.5 times Ueq of the carrier atom and C—H=0.98 Å; for others H atoms Uiso were constrained to be 1.2 times Ueq of the carrier atom and C—H=0.95 Å, 0.88 Å, for aromatic, amine groups, respectively. The incomplete data sets was collected due to poor quality, weakly diffracted crystal.

Computing details top

Data collection: CrysAlis CCD (Oxford Diffraction, 2009); cell refinement: CrysAlis RED (Oxford Diffraction, 2009); data reduction: CrysAlis RED (Oxford Diffraction, 2009); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: PLATON (Spek, 2009).

Figures top
[Figure 1] Fig. 1. Molecular structure of the title compound, showing the atom-numbering scheme. Displacement ellipsoids are drawn at the 50% probability level. The N1—H1···O4 hydrogen bond classified as resonance assisted hydrogen bond (RAHB) is shown as dashed line.
2-Methoxy-3-[(3,4,5-trimethoxyanilino)methylidene]-3,4-dihydro- 2H-1-benzopyran-4-one top
Crystal data top
C20H21NO6F(000) = 784
Mr = 371.38Dx = 1.385 Mg m3
Monoclinic, P21/cMelting point: 408.2 K
Hall symbol: -P 2ybcCu Kα radiation, λ = 1.54184 Å
a = 11.6145 (6) ÅCell parameters from 4015 reflections
b = 20.8689 (9) Åθ = 3.8–62.6°
c = 7.3728 (5) ŵ = 0.86 mm1
β = 94.533 (5)°T = 100 K
V = 1781.44 (17) Å3Needle, light yellow
Z = 40.2 × 0.05 × 0.03 mm
Data collection top
Oxford Diffraction Gemini E Ultra
diffractometer
2862 independent reflections
Radiation source: fine-focus sealed tube2344 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.024
ω scansθmax = 62.7°, θmin = 3.8°
Absorption correction: multi-scan
(CrysAlis RED; Oxford Diffraction, 2009)
h = 1312
Tmin = 0.844, Tmax = 1.000k = 2324
7511 measured reflectionsl = 88
Refinement top
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.037Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.101H-atom parameters constrained
S = 1.05 w = 1/[σ2(Fo2) + (0.0639P)2 + 0.2369P]
where P = (Fo2 + 2Fc2)/3
2862 reflections(Δ/σ)max = 0.001
248 parametersΔρmax = 0.38 e Å3
0 restraintsΔρmin = 0.22 e Å3
Crystal data top
C20H21NO6V = 1781.44 (17) Å3
Mr = 371.38Z = 4
Monoclinic, P21/cCu Kα radiation
a = 11.6145 (6) ŵ = 0.86 mm1
b = 20.8689 (9) ÅT = 100 K
c = 7.3728 (5) Å0.2 × 0.05 × 0.03 mm
β = 94.533 (5)°
Data collection top
Oxford Diffraction Gemini E Ultra
diffractometer
2862 independent reflections
Absorption correction: multi-scan
(CrysAlis RED; Oxford Diffraction, 2009)
2344 reflections with I > 2σ(I)
Tmin = 0.844, Tmax = 1.000Rint = 0.024
7511 measured reflections
Refinement top
R[F2 > 2σ(F2)] = 0.0370 restraints
wR(F2) = 0.101H-atom parameters constrained
S = 1.05Δρmax = 0.38 e Å3
2862 reflectionsΔρmin = 0.22 e Å3
248 parameters
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
O11.23908 (9)0.33541 (5)0.31295 (15)0.0255 (3)
O40.95775 (10)0.38347 (5)0.58323 (17)0.0289 (3)
O21.09596 (10)0.35060 (5)0.07967 (15)0.0260 (3)
O50.47817 (9)0.21086 (5)0.59973 (16)0.0249 (3)
O60.53215 (9)0.08807 (5)0.56606 (15)0.0238 (3)
O70.74024 (10)0.05173 (5)0.46838 (16)0.0244 (3)
C21.12917 (14)0.31326 (8)0.2334 (2)0.0235 (4)
H21.13680.26760.19520.028*
C31.03717 (14)0.31789 (7)0.3633 (2)0.0210 (3)
C41.03657 (14)0.37260 (8)0.4811 (2)0.0222 (4)
C51.14364 (15)0.47322 (8)0.5741 (2)0.0275 (4)
H51.07850.48730.63350.033*
C61.24169 (16)0.51097 (8)0.5790 (2)0.0310 (4)
H61.24450.55070.64210.037*
C71.33615 (15)0.49006 (8)0.4906 (2)0.0316 (4)
H71.40310.51630.49240.038*
C81.33492 (15)0.43197 (8)0.3999 (2)0.0285 (4)
H81.40030.41810.34070.034*
C91.13951 (14)0.41457 (8)0.4826 (2)0.0226 (4)
C101.23612 (14)0.39430 (8)0.3972 (2)0.0239 (4)
C310.95368 (14)0.27129 (7)0.3632 (2)0.0205 (3)
H310.96310.23390.29220.025*
N10.86037 (11)0.27528 (6)0.45664 (18)0.0204 (3)
H10.84880.31210.51030.025*
C330.77785 (14)0.22652 (7)0.4788 (2)0.0189 (3)
C340.66962 (14)0.24532 (7)0.5266 (2)0.0201 (3)
H340.65210.28940.54040.024*
C350.58738 (13)0.19877 (7)0.5540 (2)0.0197 (3)
C360.61350 (14)0.13378 (7)0.5328 (2)0.0209 (3)
C370.72250 (14)0.11622 (7)0.4839 (2)0.0202 (3)
C380.80637 (14)0.16237 (7)0.4574 (2)0.0198 (3)
H380.88100.15030.42570.024*
C120.44405 (15)0.27643 (8)0.6067 (2)0.0270 (4)
H12A0.49560.29920.69640.041*
H12B0.36450.27910.64170.041*
H12C0.44860.29600.48670.041*
C130.46540 (14)0.06810 (8)0.4033 (2)0.0268 (4)
H13A0.42610.10530.34580.040*
H13B0.40790.03640.43430.040*
H13C0.51670.04900.31880.040*
C140.85363 (14)0.03145 (8)0.4304 (2)0.0270 (4)
H14A0.87190.04850.31220.040*
H14B0.85650.01550.42750.040*
H14C0.91010.04740.52550.040*
C111.18116 (17)0.35023 (9)0.0509 (2)0.0344 (4)
H11A1.24850.37520.00390.052*
H11B1.14840.36930.16510.052*
H11C1.20470.30600.07310.052*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
O10.0172 (6)0.0308 (6)0.0284 (6)0.0008 (5)0.0019 (5)0.0014 (5)
O40.0269 (7)0.0251 (6)0.0361 (7)0.0055 (5)0.0123 (6)0.0058 (5)
O20.0259 (6)0.0284 (6)0.0240 (6)0.0016 (5)0.0044 (5)0.0024 (5)
O50.0189 (6)0.0225 (6)0.0343 (7)0.0013 (4)0.0078 (5)0.0024 (5)
O60.0221 (6)0.0213 (6)0.0285 (6)0.0054 (4)0.0056 (5)0.0009 (5)
O70.0229 (6)0.0163 (5)0.0349 (7)0.0006 (4)0.0080 (5)0.0002 (5)
C20.0197 (8)0.0256 (8)0.0253 (9)0.0017 (6)0.0021 (7)0.0022 (7)
C30.0188 (8)0.0237 (8)0.0204 (8)0.0001 (6)0.0013 (6)0.0012 (6)
C40.0198 (8)0.0234 (8)0.0234 (8)0.0014 (6)0.0028 (7)0.0037 (7)
C50.0277 (10)0.0290 (9)0.0260 (9)0.0047 (7)0.0037 (7)0.0025 (7)
C60.0344 (10)0.0290 (9)0.0288 (9)0.0099 (7)0.0031 (8)0.0020 (7)
C70.0222 (9)0.0375 (10)0.0343 (10)0.0095 (7)0.0037 (8)0.0096 (8)
C80.0179 (9)0.0379 (10)0.0294 (9)0.0026 (7)0.0003 (7)0.0062 (8)
C90.0214 (9)0.0266 (8)0.0196 (8)0.0038 (6)0.0003 (6)0.0032 (6)
C100.0215 (9)0.0286 (8)0.0210 (8)0.0010 (7)0.0016 (7)0.0059 (7)
C310.0209 (8)0.0227 (8)0.0178 (7)0.0009 (6)0.0004 (6)0.0004 (6)
N10.0188 (7)0.0194 (6)0.0233 (7)0.0031 (5)0.0023 (6)0.0007 (5)
C330.0189 (8)0.0215 (8)0.0162 (7)0.0031 (6)0.0001 (6)0.0009 (6)
C340.0212 (9)0.0187 (7)0.0204 (8)0.0008 (6)0.0009 (6)0.0008 (6)
C350.0174 (8)0.0228 (8)0.0189 (8)0.0012 (6)0.0024 (6)0.0007 (6)
C360.0199 (8)0.0218 (8)0.0209 (8)0.0033 (6)0.0025 (6)0.0014 (6)
C370.0223 (8)0.0186 (7)0.0198 (8)0.0005 (6)0.0025 (6)0.0001 (6)
C380.0172 (8)0.0223 (8)0.0201 (8)0.0004 (6)0.0033 (6)0.0008 (6)
C120.0229 (9)0.0250 (8)0.0333 (9)0.0057 (7)0.0036 (7)0.0035 (7)
C130.0213 (9)0.0224 (8)0.0365 (10)0.0035 (6)0.0009 (7)0.0008 (7)
C140.0238 (9)0.0216 (8)0.0364 (10)0.0042 (6)0.0085 (8)0.0000 (7)
C110.0363 (11)0.0399 (10)0.0284 (9)0.0068 (8)0.0118 (8)0.0006 (8)
Geometric parameters (Å, º) top
O1—C101.379 (2)C9—C101.395 (2)
O1—C21.438 (2)C31—N11.332 (2)
O4—C41.251 (2)C31—H310.9500
O2—C21.4042 (19)N1—C331.416 (2)
O2—C111.434 (2)N1—H10.8800
O5—C351.3614 (19)C33—C341.389 (2)
O5—C121.4267 (19)C33—C381.391 (2)
O6—C361.3781 (19)C34—C351.388 (2)
O6—C131.438 (2)C34—H340.9500
O7—C371.3677 (18)C35—C361.401 (2)
O7—C141.4318 (19)C36—C371.393 (2)
C2—C31.493 (2)C37—C381.394 (2)
C2—H21.0000C38—H380.9500
C3—C311.373 (2)C12—H12A0.9800
C3—C41.435 (2)C12—H12B0.9800
C4—C91.481 (2)C12—H12C0.9800
C5—C61.383 (2)C13—H13A0.9800
C5—C91.397 (2)C13—H13B0.9800
C5—H50.9500C13—H13C0.9800
C6—C71.390 (3)C14—H14A0.9800
C6—H60.9500C14—H14B0.9800
C7—C81.384 (3)C14—H14C0.9800
C7—H70.9500C11—H11A0.9800
C8—C101.390 (2)C11—H11B0.9800
C8—H80.9500C11—H11C0.9800
C10—O1—C2114.66 (12)C34—C33—N1117.44 (13)
C2—O2—C11112.27 (13)C38—C33—N1120.61 (14)
C35—O5—C12116.97 (12)C35—C34—C33119.10 (14)
C36—O6—C13112.60 (12)C35—C34—H34120.4
C37—O7—C14117.01 (12)C33—C34—H34120.4
O2—C2—O1109.21 (12)O5—C35—C34124.86 (14)
O2—C2—C3108.48 (13)O5—C35—C36114.91 (13)
O1—C2—C3112.02 (13)C34—C35—C36120.23 (15)
O2—C2—H2109.0O6—C36—C37120.92 (14)
O1—C2—H2109.0O6—C36—C35119.52 (14)
C3—C2—H2109.0C37—C36—C35119.53 (14)
C31—C3—C4121.76 (15)O7—C37—C36115.26 (14)
C31—C3—C2119.67 (14)O7—C37—C38123.80 (14)
C4—C3—C2118.53 (14)C36—C37—C38120.93 (14)
O4—C4—C3123.18 (14)C33—C38—C37118.27 (15)
O4—C4—C9121.12 (15)C33—C38—H38120.9
C3—C4—C9115.62 (14)C37—C38—H38120.9
C6—C5—C9120.58 (17)O5—C12—H12A109.5
C6—C5—H5119.7O5—C12—H12B109.5
C9—C5—H5119.7H12A—C12—H12B109.5
C5—C6—C7119.20 (17)O5—C12—H12C109.5
C5—C6—H6120.4H12A—C12—H12C109.5
C7—C6—H6120.4H12B—C12—H12C109.5
C8—C7—C6121.54 (16)O6—C13—H13A109.5
C8—C7—H7119.2O6—C13—H13B109.5
C6—C7—H7119.2H13A—C13—H13B109.5
C7—C8—C10118.64 (16)O6—C13—H13C109.5
C7—C8—H8120.7H13A—C13—H13C109.5
C10—C8—H8120.7H13B—C13—H13C109.5
C10—C9—C5119.05 (15)O7—C14—H14A109.5
C10—C9—C4119.66 (15)O7—C14—H14B109.5
C5—C9—C4121.24 (15)H14A—C14—H14B109.5
O1—C10—C8117.42 (15)O7—C14—H14C109.5
O1—C10—C9121.56 (14)H14A—C14—H14C109.5
C8—C10—C9120.98 (16)H14B—C14—H14C109.5
N1—C31—C3123.98 (15)O2—C11—H11A109.5
N1—C31—H31118.0O2—C11—H11B109.5
C3—C31—H31118.0H11A—C11—H11B109.5
C31—N1—C33126.91 (13)O2—C11—H11C109.5
C31—N1—H1116.5H11A—C11—H11C109.5
C33—N1—H1116.5H11B—C11—H11C109.5
C34—C33—C38121.93 (14)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N1—H1···O40.882.002.661 (2)131
C14—H14A···O4i0.982.483.414 (2)160
Symmetry code: (i) x, y+1/2, z1/2.

Experimental details

Crystal data
Chemical formulaC20H21NO6
Mr371.38
Crystal system, space groupMonoclinic, P21/c
Temperature (K)100
a, b, c (Å)11.6145 (6), 20.8689 (9), 7.3728 (5)
β (°) 94.533 (5)
V3)1781.44 (17)
Z4
Radiation typeCu Kα
µ (mm1)0.86
Crystal size (mm)0.2 × 0.05 × 0.03
Data collection
DiffractometerOxford Diffraction Gemini E Ultra
diffractometer
Absorption correctionMulti-scan
(CrysAlis RED; Oxford Diffraction, 2009)
Tmin, Tmax0.844, 1.000
No. of measured, independent and
observed [I > 2σ(I)] reflections
7511, 2862, 2344
Rint0.024
(sin θ/λ)max1)0.576
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.037, 0.101, 1.05
No. of reflections2862
No. of parameters248
H-atom treatmentH-atom parameters constrained
Δρmax, Δρmin (e Å3)0.38, 0.22

Computer programs: CrysAlis CCD (Oxford Diffraction, 2009), CrysAlis RED (Oxford Diffraction, 2009), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), PLATON (Spek, 2009).

Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N1—H1···O40.882.002.661 (2)131
C14—H14A···O4i0.982.483.414 (2)160
Symmetry code: (i) x, y+1/2, z1/2.
 

Acknowledgements

Financial support from the University of Łódź and the Medical University of Łódź (grant No. 505/710 to MM and No. 502–13-701 to MC) is gratefully acknowledged. The authors thank Dr Oliver Presly from Oxford Diffraction for collecting the data.

References

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