organic compounds
7-(4-Methoxyphenyl)-5-methyl-9-phenyl-7H-pyrrolo[2′,3′:4,5]pyrimido[1,6-d]tetrazole
aBhavan's Sheth R.A. College of Science, Ahmedabd, Gujarat 380 001, India, bM. G. Science Institute, Navrangpura, Ahmedabad, Gujarat 380 009, India, and cDepartment of Chemistry, Keene State College, 229 Main Street, Keene, NH 03435-2001, USA
*Correspondence e-mail: jjasinski@keene.edu
The title compound, C20H16N6O, is composed of a tetrazolo ring and a 4-methoxyphenyl and a benzene-substituted pyrrole ring at the 7 and 9 positions fused to a pyrimidine ring in a nearly planar fashion [maximum deviation of 0.018 (1) Å for the fused ring system]. A methyl group at the 5 position is also in the plane of the hetero cyclic system. The dihedral angle between the mean planes of the benzene and 4-methoxyphenyl rings is 40.4 (2)°. The dihedral angles between the mean planes of the pyrimidine and the benzene and 4-methoxyphenyl rings are 15.6 (5)° and 52.6 (7)°, respectively. A weak intramolecular C—H⋯N hydrogen bond interaction, which forms an S(7) graph-set motif, helps to establish the relative conformations of the tetrazolo and benzene rings. In the crystal, weak intermolecular C—H⋯O, C—H⋯π and π–π stacking interactions [centroid–centroid distances = 3.5270 (16), 3.5113 (16), 3.7275 (17) and 3.7866 (17) Å] link the molecules into a two-dimensional array obliquely parallel to (101) and propagating along the b axis.
Related literature
For the biological activity of fused tetrazolopyrimidines, see: Wilkinson (1992); Omer et al. (1991); Schram et al. (1975). Fused pyrimidines with a halogen at the 2- or 4- position seem to be more labile towards a nucleophilic with reagents such as piperadine, piperazine, morpholine, hydrazine and forming potent bi- and triheterocycles, see: Dave & Shah (2000, 2002); Peinador et al. (1992); Schneller & Clough (1992); Shishoo & Jain (1992). For the importance of the reduction of tetrazolopyrimidines via azidolysis in the development of synthetically important 4-aminopyrimidines, see: Shishoo & Jain (1992); Hand & Backer (1984). For nucleophilic substitution reactions in pyrrolo[2,3-e] pyrimidines, see: Dave & Shah (2002); Ali & Swealan (1992). For related structures, see: Jotani & Baldaniya (2007, 2008); Hou et al. (2009); Baldaniya & Jotani (2008); Malone et al. (1997). For the synthesis, see: Shah (2009). For hydrogen-bond motifs, see: Bernstein et al. (1995). For tetrazolo ring formation, see: Bourgurgnon et al. (1975); Robba et al. (1975).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2004); cell APEX2 and SAINT (Bruker, 2004); data reduction: SAINT and XPREP (Bruker, 2004); program(s) used to solve structure: SIR2004 (Burla et al., 2003); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-32 and PLATON (Spek, 2009); software used to prepare material for publication: SHELXL97.
Supporting information
10.1107/S1600536809053653/gw2072sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809053653/gw2072Isup2.hkl
The title compound was synthesized according to method of Shah (2009). A mixture of sodium azide (0.011 mole), ammonium chloride (0.011 mole) and 2-methyl-5-phenyl-7-(4-methoxyphenyl)-4-chloro-7H-pyrrolo[2,3-d]pyrimidine (0.01 mole) in DMSO (20 ml) was stirred for for 2 h at 363 K to obtain the title compound (I). Colorless platlike single crystals, suitable for X-ray diffraction were grown from a solution of 1,4-dioxane.
All of the H atoms were placed in their calculated positions and then refined using the riding model with C—H = 0.95–0.98 Å, and with Uiso(H) = 1.18–1.50Ueq(C).
Data collection: APEX2 (Bruker, 2004); cell
APEX2 and SAINT (Bruker, 2004); data reduction: SAINT and XPREP (Bruker, 2004); program(s) used to solve structure: SIR2004 (Burla et al., 2003); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-32 and PLATON (Spek, 2009); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).C20H16N6O | F(000) = 744 |
Mr = 356.39 | Dx = 1.344 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 5176 reflections |
a = 13.738 (2) Å | θ = 2.2–31.3° |
b = 7.032 (3) Å | µ = 0.09 mm−1 |
c = 19.4350 (3) Å | T = 293 K |
β = 110.217 (2)° | Plate, yellow |
V = 1761.9 (8) Å3 | 0.47 × 0.35 × 0.2 mm |
Z = 4 |
Bruker Kappa APEXII CCD diffractometer | 5137 independent reflections |
Radiation source: fine-focus sealed tube | 3694 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.030 |
ω and ϕ scan | θmax = 30.0°, θmin = 1.6° |
Absorption correction: multi-scan (SADABS; Sheldrick, 2004) | h = −19→19 |
Tmin = 0.96, Tmax = 0.98 | k = −4→9 |
42323 measured reflections | l = −27→27 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.045 | H-atom parameters constrained |
wR(F2) = 0.129 | w = 1/[σ2(Fo2) + (0.0656P)2 + 0.2469P] where P = (Fo2 + 2Fc2)/3 |
S = 1.04 | (Δ/σ)max = 0.001 |
5137 reflections | Δρmax = 0.29 e Å−3 |
247 parameters | Δρmin = −0.20 e Å−3 |
0 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0104 (12) |
C20H16N6O | V = 1761.9 (8) Å3 |
Mr = 356.39 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 13.738 (2) Å | µ = 0.09 mm−1 |
b = 7.032 (3) Å | T = 293 K |
c = 19.4350 (3) Å | 0.47 × 0.35 × 0.2 mm |
β = 110.217 (2)° |
Bruker Kappa APEXII CCD diffractometer | 5137 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 2004) | 3694 reflections with I > 2σ(I) |
Tmin = 0.96, Tmax = 0.98 | Rint = 0.030 |
42323 measured reflections |
R[F2 > 2σ(F2)] = 0.045 | 0 restraints |
wR(F2) = 0.129 | H-atom parameters constrained |
S = 1.04 | Δρmax = 0.29 e Å−3 |
5137 reflections | Δρmin = −0.20 e Å−3 |
247 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
N1 | 0.49323 (7) | 0.66669 (14) | 0.35550 (5) | 0.0364 (2) | |
N2 | 0.64444 (8) | 0.71967 (13) | 0.46114 (6) | 0.0390 (2) | |
N3 | 0.60830 (8) | 0.78499 (13) | 0.56626 (5) | 0.0387 (2) | |
N4 | 0.63253 (10) | 0.82763 (16) | 0.63905 (6) | 0.0503 (3) | |
N5 | 0.54477 (10) | 0.84057 (18) | 0.64892 (6) | 0.0553 (3) | |
N6 | 0.46241 (9) | 0.80796 (15) | 0.58676 (5) | 0.0461 (3) | |
O1 | 0.67511 (8) | 0.63011 (14) | 0.14173 (5) | 0.0557 (3) | |
C1 | 0.54006 (9) | 0.70521 (14) | 0.42843 (6) | 0.0342 (2) | |
C2 | 0.46308 (9) | 0.72839 (14) | 0.45931 (6) | 0.0322 (2) | |
C3 | 0.36448 (9) | 0.70460 (14) | 0.40206 (6) | 0.0331 (2) | |
C4 | 0.38831 (9) | 0.66682 (16) | 0.34039 (6) | 0.0372 (2) | |
H4 | 0.3383 | 0.6437 | 0.2933 | 0.045* | |
C5 | 0.67850 (10) | 0.75945 (15) | 0.53047 (7) | 0.0400 (3) | |
C6 | 0.50261 (9) | 0.77276 (14) | 0.53513 (6) | 0.0350 (2) | |
C7 | 0.79065 (11) | 0.7757 (2) | 0.57366 (8) | 0.0538 (3) | |
H7A | 0.8307 | 0.7651 | 0.5408 | 0.081* | |
H7B | 0.8109 | 0.6735 | 0.6102 | 0.081* | |
H7C | 0.8044 | 0.8991 | 0.5986 | 0.081* | |
C8 | 0.25890 (9) | 0.71760 (15) | 0.40362 (6) | 0.0348 (2) | |
C9 | 0.17475 (10) | 0.73306 (18) | 0.33836 (7) | 0.0437 (3) | |
H9 | 0.1867 | 0.7361 | 0.2931 | 0.052* | |
C10 | 0.07452 (11) | 0.7441 (2) | 0.33822 (8) | 0.0531 (3) | |
H10 | 0.0183 | 0.7540 | 0.2931 | 0.064* | |
C11 | 0.05569 (11) | 0.7407 (2) | 0.40303 (9) | 0.0572 (4) | |
H11 | −0.0134 | 0.7493 | 0.4030 | 0.069* | |
C12 | 0.13717 (12) | 0.7249 (2) | 0.46801 (9) | 0.0559 (4) | |
H12 | 0.1242 | 0.7217 | 0.5129 | 0.067* | |
C13 | 0.23768 (11) | 0.71372 (18) | 0.46865 (7) | 0.0444 (3) | |
H13 | 0.2932 | 0.7032 | 0.5141 | 0.053* | |
C14 | 0.54240 (9) | 0.65119 (16) | 0.30183 (6) | 0.0352 (2) | |
C15 | 0.50818 (9) | 0.76648 (17) | 0.24049 (6) | 0.0409 (3) | |
H15 | 0.4533 | 0.8542 | 0.2348 | 0.049* | |
C16 | 0.55355 (10) | 0.75407 (18) | 0.18782 (7) | 0.0437 (3) | |
H16 | 0.5294 | 0.8320 | 0.1454 | 0.052* | |
C17 | 0.63448 (9) | 0.62818 (17) | 0.19641 (6) | 0.0397 (3) | |
C18 | 0.66942 (9) | 0.51457 (18) | 0.25825 (7) | 0.0430 (3) | |
H18 | 0.7254 | 0.4291 | 0.2646 | 0.052* | |
C19 | 0.62275 (9) | 0.52564 (17) | 0.31077 (6) | 0.0413 (3) | |
H19 | 0.6461 | 0.4467 | 0.3530 | 0.050* | |
C20 | 0.75810 (14) | 0.5043 (3) | 0.14708 (10) | 0.0782 (6) | |
H20A | 0.8168 | 0.5324 | 0.1918 | 0.117* | |
H20B | 0.7795 | 0.5207 | 0.1043 | 0.117* | |
H20C | 0.7354 | 0.3728 | 0.1488 | 0.117* |
U11 | U22 | U33 | U12 | U13 | U23 | |
N1 | 0.0378 (5) | 0.0443 (5) | 0.0276 (5) | 0.0018 (4) | 0.0121 (4) | −0.0010 (4) |
N2 | 0.0382 (5) | 0.0396 (5) | 0.0362 (5) | 0.0018 (4) | 0.0092 (4) | 0.0011 (4) |
N3 | 0.0492 (6) | 0.0345 (4) | 0.0271 (5) | −0.0023 (4) | 0.0064 (4) | 0.0001 (3) |
N4 | 0.0663 (8) | 0.0509 (6) | 0.0272 (5) | −0.0076 (5) | 0.0080 (5) | −0.0035 (4) |
N5 | 0.0717 (8) | 0.0613 (7) | 0.0300 (6) | −0.0110 (6) | 0.0139 (5) | −0.0068 (5) |
N6 | 0.0620 (7) | 0.0495 (6) | 0.0284 (5) | −0.0074 (5) | 0.0175 (5) | −0.0042 (4) |
O1 | 0.0641 (6) | 0.0690 (6) | 0.0459 (5) | 0.0180 (5) | 0.0340 (5) | 0.0111 (4) |
C1 | 0.0401 (6) | 0.0329 (5) | 0.0285 (5) | 0.0015 (4) | 0.0105 (4) | 0.0016 (4) |
C2 | 0.0406 (6) | 0.0288 (4) | 0.0272 (5) | 0.0002 (4) | 0.0118 (4) | 0.0018 (4) |
C3 | 0.0388 (6) | 0.0327 (5) | 0.0278 (5) | 0.0006 (4) | 0.0115 (4) | 0.0016 (4) |
C4 | 0.0365 (6) | 0.0436 (6) | 0.0298 (5) | 0.0000 (4) | 0.0095 (5) | −0.0017 (4) |
C5 | 0.0437 (7) | 0.0334 (5) | 0.0373 (6) | 0.0010 (4) | 0.0069 (5) | 0.0014 (4) |
C6 | 0.0458 (6) | 0.0289 (5) | 0.0293 (5) | −0.0020 (4) | 0.0115 (5) | 0.0017 (4) |
C7 | 0.0451 (7) | 0.0510 (7) | 0.0520 (8) | −0.0023 (5) | −0.0001 (6) | −0.0040 (6) |
C8 | 0.0407 (6) | 0.0320 (5) | 0.0326 (6) | −0.0005 (4) | 0.0137 (5) | −0.0007 (4) |
C9 | 0.0426 (7) | 0.0532 (7) | 0.0346 (6) | 0.0003 (5) | 0.0124 (5) | −0.0012 (5) |
C10 | 0.0404 (7) | 0.0647 (8) | 0.0496 (8) | 0.0015 (6) | 0.0096 (6) | −0.0037 (6) |
C11 | 0.0430 (8) | 0.0684 (9) | 0.0646 (10) | −0.0028 (6) | 0.0244 (7) | −0.0089 (7) |
C12 | 0.0543 (8) | 0.0711 (9) | 0.0512 (8) | −0.0043 (7) | 0.0297 (7) | −0.0068 (6) |
C13 | 0.0464 (7) | 0.0536 (7) | 0.0349 (6) | −0.0008 (5) | 0.0161 (5) | −0.0016 (5) |
C14 | 0.0369 (6) | 0.0420 (5) | 0.0277 (5) | −0.0006 (4) | 0.0124 (4) | −0.0023 (4) |
C15 | 0.0381 (6) | 0.0512 (6) | 0.0327 (6) | 0.0103 (5) | 0.0113 (5) | 0.0035 (5) |
C16 | 0.0448 (7) | 0.0550 (7) | 0.0312 (6) | 0.0087 (5) | 0.0129 (5) | 0.0090 (5) |
C17 | 0.0416 (6) | 0.0474 (6) | 0.0337 (6) | 0.0020 (5) | 0.0174 (5) | 0.0000 (4) |
C18 | 0.0451 (7) | 0.0448 (6) | 0.0426 (7) | 0.0110 (5) | 0.0195 (5) | 0.0049 (5) |
C19 | 0.0472 (7) | 0.0433 (6) | 0.0348 (6) | 0.0075 (5) | 0.0158 (5) | 0.0069 (4) |
C20 | 0.0943 (13) | 0.0825 (11) | 0.0864 (12) | 0.0367 (10) | 0.0674 (11) | 0.0245 (9) |
N1—C1 | 1.3661 (14) | C8—C9 | 1.3942 (17) |
N1—C4 | 1.3680 (15) | C9—C10 | 1.3783 (18) |
N1—C14 | 1.4294 (14) | C9—H9 | 0.9500 |
N2—C5 | 1.2951 (16) | C10—C11 | 1.371 (2) |
N2—C1 | 1.3567 (15) | C10—H10 | 0.9500 |
N3—C6 | 1.3691 (16) | C11—C12 | 1.372 (2) |
N3—N4 | 1.3699 (14) | C11—H11 | 0.9500 |
N3—C5 | 1.3819 (17) | C12—C13 | 1.379 (2) |
N4—N5 | 1.2879 (17) | C12—H12 | 0.9500 |
N5—N6 | 1.3591 (16) | C13—H13 | 0.9500 |
N6—C6 | 1.3254 (15) | C14—C19 | 1.3768 (16) |
O1—C17 | 1.3606 (13) | C14—C15 | 1.3828 (16) |
O1—C20 | 1.4183 (17) | C15—C16 | 1.3730 (17) |
C1—C2 | 1.3942 (16) | C15—H15 | 0.9500 |
C2—C6 | 1.4178 (15) | C16—C17 | 1.3854 (17) |
C2—C3 | 1.4351 (15) | C16—H16 | 0.9500 |
C3—C4 | 1.3730 (15) | C17—C18 | 1.3835 (16) |
C3—C8 | 1.4640 (16) | C18—C19 | 1.3825 (16) |
C4—H4 | 0.9500 | C18—H18 | 0.9500 |
C5—C7 | 1.4824 (18) | C19—H19 | 0.9500 |
C7—H7A | 0.9800 | C20—H20A | 0.9800 |
C7—H7B | 0.9800 | C20—H20B | 0.9800 |
C7—H7C | 0.9800 | C20—H20C | 0.9800 |
C8—C13 | 1.3920 (17) | ||
C1—N1—C4 | 107.82 (9) | C10—C9—H9 | 119.3 |
C1—N1—C14 | 126.90 (10) | C8—C9—H9 | 119.3 |
C4—N1—C14 | 124.89 (9) | C11—C10—C9 | 120.20 (14) |
C5—N2—C1 | 116.55 (11) | C11—C10—H10 | 119.9 |
C6—N3—N4 | 108.19 (10) | C9—C10—H10 | 119.9 |
C6—N3—C5 | 125.97 (10) | C10—C11—C12 | 119.60 (13) |
N4—N3—C5 | 125.83 (11) | C10—C11—H11 | 120.2 |
N5—N4—N3 | 105.27 (10) | C12—C11—H11 | 120.2 |
N4—N5—N6 | 112.98 (11) | C11—C12—C13 | 120.58 (13) |
C6—N6—N5 | 105.53 (11) | C11—C12—H12 | 119.7 |
C17—O1—C20 | 118.22 (10) | C13—C12—H12 | 119.7 |
N2—C1—N1 | 122.92 (10) | C12—C13—C8 | 120.93 (13) |
N2—C1—C2 | 128.74 (10) | C12—C13—H13 | 119.5 |
N1—C1—C2 | 108.33 (10) | C8—C13—H13 | 119.5 |
C1—C2—C6 | 113.45 (10) | C19—C14—C15 | 120.24 (10) |
C1—C2—C3 | 107.80 (9) | C19—C14—N1 | 121.15 (10) |
C6—C2—C3 | 138.71 (11) | C15—C14—N1 | 118.61 (10) |
C4—C3—C2 | 104.68 (10) | C16—C15—C14 | 119.92 (11) |
C4—C3—C8 | 124.54 (10) | C16—C15—H15 | 120.0 |
C2—C3—C8 | 130.77 (10) | C14—C15—H15 | 120.0 |
N1—C4—C3 | 111.35 (10) | C15—C16—C17 | 120.19 (11) |
N1—C4—H4 | 124.3 | C15—C16—H16 | 119.9 |
C3—C4—H4 | 124.3 | C17—C16—H16 | 119.9 |
N2—C5—N3 | 119.19 (11) | O1—C17—C18 | 124.85 (11) |
N2—C5—C7 | 122.47 (12) | O1—C17—C16 | 115.35 (10) |
N3—C5—C7 | 118.33 (11) | C18—C17—C16 | 119.78 (11) |
N6—C6—N3 | 108.03 (10) | C19—C18—C17 | 119.91 (11) |
N6—C6—C2 | 135.87 (11) | C19—C18—H18 | 120.0 |
N3—C6—C2 | 116.10 (10) | C17—C18—H18 | 120.0 |
C5—C7—H7A | 109.5 | C14—C19—C18 | 119.94 (11) |
C5—C7—H7B | 109.5 | C14—C19—H19 | 120.0 |
H7A—C7—H7B | 109.5 | C18—C19—H19 | 120.0 |
C5—C7—H7C | 109.5 | O1—C20—H20A | 109.5 |
H7A—C7—H7C | 109.5 | O1—C20—H20B | 109.5 |
H7B—C7—H7C | 109.5 | H20A—C20—H20B | 109.5 |
C13—C8—C9 | 117.35 (11) | O1—C20—H20C | 109.5 |
C13—C8—C3 | 122.51 (11) | H20A—C20—H20C | 109.5 |
C9—C8—C3 | 120.13 (10) | H20B—C20—H20C | 109.5 |
C10—C9—C8 | 121.33 (12) | ||
C6—N3—N4—N5 | −0.45 (12) | C5—N3—C6—C2 | 0.47 (15) |
C5—N3—N4—N5 | 179.34 (10) | C1—C2—C6—N6 | 179.44 (12) |
N3—N4—N5—N6 | 0.33 (14) | C3—C2—C6—N6 | 1.9 (2) |
N4—N5—N6—C6 | −0.08 (14) | C1—C2—C6—N3 | −0.34 (13) |
C5—N2—C1—N1 | 179.05 (10) | C3—C2—C6—N3 | −177.88 (11) |
C5—N2—C1—C2 | 0.35 (17) | C4—C3—C8—C13 | 165.29 (11) |
C4—N1—C1—N2 | −178.52 (10) | C2—C3—C8—C13 | −15.64 (17) |
C14—N1—C1—N2 | −5.42 (17) | C4—C3—C8—C9 | −14.18 (16) |
C4—N1—C1—C2 | 0.41 (12) | C2—C3—C8—C9 | 164.89 (11) |
C14—N1—C1—C2 | 173.51 (10) | C13—C8—C9—C10 | 0.00 (17) |
N2—C1—C2—C6 | −0.04 (16) | C3—C8—C9—C10 | 179.50 (11) |
N1—C1—C2—C6 | −178.89 (9) | C8—C9—C10—C11 | 0.3 (2) |
N2—C1—C2—C3 | 178.25 (10) | C9—C10—C11—C12 | −0.5 (2) |
N1—C1—C2—C3 | −0.60 (11) | C10—C11—C12—C13 | 0.4 (2) |
C1—C2—C3—C4 | 0.54 (11) | C11—C12—C13—C8 | −0.2 (2) |
C6—C2—C3—C4 | 178.17 (12) | C9—C8—C13—C12 | −0.05 (17) |
C1—C2—C3—C8 | −178.67 (10) | C3—C8—C13—C12 | −179.54 (11) |
C6—C2—C3—C8 | −1.0 (2) | C1—N1—C14—C19 | 55.88 (16) |
C1—N1—C4—C3 | −0.06 (13) | C4—N1—C14—C19 | −132.14 (12) |
C14—N1—C4—C3 | −173.33 (10) | C1—N1—C14—C15 | −123.61 (12) |
C2—C3—C4—N1 | −0.30 (12) | C4—N1—C14—C15 | 48.36 (16) |
C8—C3—C4—N1 | 178.97 (9) | C19—C14—C15—C16 | 0.85 (18) |
C1—N2—C5—N3 | −0.24 (15) | N1—C14—C15—C16 | −179.66 (11) |
C1—N2—C5—C7 | 178.70 (10) | C14—C15—C16—C17 | −0.88 (19) |
C6—N3—C5—N2 | −0.17 (16) | C20—O1—C17—C18 | 1.4 (2) |
N4—N3—C5—N2 | −179.92 (10) | C20—O1—C17—C16 | −179.88 (14) |
C6—N3—C5—C7 | −179.15 (10) | C15—C16—C17—O1 | −178.74 (12) |
N4—N3—C5—C7 | 1.10 (16) | C15—C16—C17—C18 | 0.1 (2) |
N5—N6—C6—N3 | −0.22 (12) | O1—C17—C18—C19 | 179.42 (12) |
N5—N6—C6—C2 | 179.99 (12) | C16—C17—C18—C19 | 0.70 (19) |
N4—N3—C6—N6 | 0.42 (12) | C15—C14—C19—C18 | −0.04 (18) |
C5—N3—C6—N6 | −179.37 (10) | N1—C14—C19—C18 | −179.52 (11) |
N4—N3—C6—C2 | −179.74 (9) | C17—C18—C19—C14 | −0.73 (19) |
D—H···A | D—H | H···A | D···A | D—H···A |
C13—H13···N6 | 0.95 | 2.38 | 3.2159 (18) | 146 |
C12—H12···O1i | 0.95 | 2.57 | 3.3902 (17) | 144 |
C7—H7B···Cg4ii | 0.96 | 2.90 | 3.620 (2) | 132 |
C7—H7C···Cg4iii | 0.96 | 2.69 | 3.554 (2) | 150 |
Symmetry codes: (i) x−1/2, −y+3/2, z+1/2; (ii) −x+1, −y+1, −z+1; (iii) −x+1, −y+2, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C20H16N6O |
Mr | 356.39 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 293 |
a, b, c (Å) | 13.738 (2), 7.032 (3), 19.4350 (3) |
β (°) | 110.217 (2) |
V (Å3) | 1761.9 (8) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.09 |
Crystal size (mm) | 0.47 × 0.35 × 0.2 |
Data collection | |
Diffractometer | Bruker Kappa APEXII CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 2004) |
Tmin, Tmax | 0.96, 0.98 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 42323, 5137, 3694 |
Rint | 0.030 |
(sin θ/λ)max (Å−1) | 0.703 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.045, 0.129, 1.04 |
No. of reflections | 5137 |
No. of parameters | 247 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.29, −0.20 |
Computer programs: APEX2 (Bruker, 2004), APEX2 and SAINT (Bruker, 2004), SAINT and XPREP (Bruker, 2004), SIR2004 (Burla et al., 2003), SHELXL97 (Sheldrick, 2008), ORTEP-32 and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
C13—H13···N6 | 0.95 | 2.38 | 3.2159 (18) | 146.4 |
C12—H12···O1i | 0.95 | 2.57 | 3.3902 (17) | 144.1 |
C7—H7B···Cg4ii | 0.96 | 2.90 | 3.620 (2) | 132 |
C7—H7C···Cg4iii | 0.96 | 2.69 | 3.554 (2) | 150 |
Symmetry codes: (i) x−1/2, −y+3/2, z+1/2; (ii) −x+1, −y+1, −z+1; (iii) −x+1, −y+2, −z+1. |
Acknowledgements
The authors thank Department of Science and Technology (DST) and the SAIF, IIT Madras, Chennai, India, for the intensity data collection.
References
Ali, A. S. & Swealan, S. A. (1992). Egypt J. Pharm. Sci. 33, 473–477. CAS Google Scholar
Baldaniya, B. B. & Jotani, M. M. (2008). Anal. Sci. X-Ray Struct. Online 24, x217–x218. CSD CrossRef CAS Google Scholar
Bernstein, J., Davis, R. E., Shimoni, L. & Chang, N. L. (1995). Angew. Chem. Int. Ed. Engl. 34, 1555–1573. CrossRef CAS Web of Science Google Scholar
Bourgurgnon, J., Gougeon, E., Queguiner, G. & Pastor, B. (1975). Bull. Soc. Chim. Fr. 3-4, 815–819. Google Scholar
Bruker (2004). APEX2, SAINT, XPREP and SADABS. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Burla, M. C., Camalli, M., Carrozzini, B., Cascarano, G. L., Giacovazzo, C., Polidori, G. & Spagna, R. (2003). J. Appl. Cryst. 36, 1103. CrossRef IUCr Journals Google Scholar
Dave, C. G. & Shah, R. D. (2000). J. Heterocycl. Chem. 7, 757–761. CrossRef Google Scholar
Dave, C. G. & Shah, R. D. (2002). Molecules, 7, 534–543. Web of Science CrossRef Google Scholar
Hand, E. S. & Backer, D. C. (1984). Can. J. Chem. 62, 2570–2577. CrossRef CAS Web of Science Google Scholar
Hou, Z.-H., Zhou, N.-B., He, B.-H. & Li, X.-F. (2009). Acta Cryst. E65, o375. Web of Science CSD CrossRef IUCr Journals Google Scholar
Jotani, M. M. & Baldaniya, B. B. (2007). Acta Cryst. E63, o1937–o1939. Web of Science CSD CrossRef IUCr Journals Google Scholar
Jotani, M. M. & Baldaniya, B. B. (2008). Acta Cryst. E64, o739. Web of Science CSD CrossRef IUCr Journals Google Scholar
Malone, J. F., Murray, C. M., Charlton, M. H., Docherty, R. & Lavery, A. J. (1997). J. Chem. Soc. Faraday Trans. pp. 3429–3436. CrossRef Web of Science Google Scholar
Omer, A., Mohson, M., Shams, A. & Labouta, I. A. (1991). J. Pharm. Sci. 5, 213–218. Google Scholar
Peinador, C., Ojea, V. & Quintela, J. M. (1992). J. Heterocycl. Chem. 29, 1698–1702. CrossRef Google Scholar
Robba, M., Lecomte, J. M. & Cugnon de, M. (1975). J. Heterocycl. Chem. 12, 525–527. CrossRef CAS Google Scholar
Schneller, S. W. & Clough, F. W. (1992). J. Heterocycl. Chem. 11, 975–977. CrossRef Google Scholar
Schram, K. L., Manning, S. J. & Townsend, L. B. (1975). J. Heterocycl. Chem.12, 1021–1023. Google Scholar
Shah, R. D. (2009). Unpublished results. Google Scholar
Sheldrick, G. M. (2004). SADABS. University of Göttingen, Germany. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Shishoo, C. J. & Jain, S. K. (1992). J. Heterocycl Chem. 29, 883–893. CrossRef CAS Google Scholar
Spek, A. L. (2009). Acta Cryst. D65, 148–155. Web of Science CrossRef CAS IUCr Journals Google Scholar
Wilkinson, J. A. (1992). Chem. Rev. 92, 505–519. CrossRef CAS Web of Science Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Fused tetrazolopyrimidines are important to the activities of a variety of biological substances (Willkinson, 1992; Omer et al., 1991; Schram et al., 1975). Moreover, fused pyrimidines having a halogen at the 2- or 4- position seem to be more labile towards a nucleophilic substitution reaction with reagents such as piperadine, piperazine, morpholine, hydrazine and azides to form potent bi and triheterocycles (Dave & Shah, 2002; Peinador et al., 1992; Schneller & Clough, 1992; Shishoo & Jain, 1992). The reduction of tetrazolopyrimidines via azidolysis studies have been shown to be to attractive to development of synthetically important 4-aminopyrimidines (Shishoo & Jain, 1992; Hand & Backer, 1984). The treatment of sodium azide with 4-chloropyrrolo[2,3-e] pyrimidine can result the formation of either an azido group or tetrazole ring upon a fused pyrimidine ring. Such nucleophilic substitution reactions have rarely been attempted in pyrrolo[2,3-e] pyrimidines (Dave & Shah, 2002; Ali & Swealan, 1992). In view of the importance of these molecules, a crystal structure of the title compound, C20H16N6O, (I) has been determined.
The title compound, C20H16N6O, (I), is composed of a tetrazolo ring and a 4-methoxyphenyl and benzene substituted pyrrole ring at the 7 and 9 position fused to a pyrimidine ring in a nearly planar fashion (Fig. 1). The r.m.s.deviation of atoms of the fused ring from the mean plane through the heterotricyclic system is 0.0085 Å, with a maximum deviation of -0.018 (1) and 0.013 (1) Å for atoms C2 and C3 respectively. Bond lengths and angles for the fused pyrrole and tetrazole rings in (I) are normal and similar to that observed for a related structure. The dihedral angles between the mean planes of fused pyrimidine and tetrazole rings with that of the pyrrole ring are 1.26 (6) ° and 1.13 (7)°, respectively. A methyl group at the 5 position is also in the plane of the pyrimidine ring. The dihedral angle between the mean planes of the benzene and 4-methoxyphenyl rings is 40.4 (2)°. The angles between the mean planes of the pyrimidine and the benzene and 4-methoxyphenyl rings are 15.6 (5)° and 52.6 (7)°, respectively. A weak intramolecular C13–H13···N6 hydrogen bond interaction, which forms an S(7) graph set, helps stabilize the separation angle between the tetrazolo and benzene rings. Weak intermolecular C12–H12···O1 (Fig. 2), C–H···π-ring (C7–H7B(H7C)···Cg4 [= 3.620 (2) (3.554 (2) Å; 1 - x, 1 - y, 1 - z (1 - x, 2 - y, 1 - z); where Cg4 = C8–C13 ring centroid; Table 1] and π–π [Cg1···Cg2; = 3.5270 (16)Å & 3.5113 (16) Å,1 - x, 1 - y, 1 - x & 1 - x, 2 - y, 1 - z; Cg2···Cg3; = 3.7275 (17) Å, 1 - x, 2 - y, 1 - z; Cg3···Cg1; = 3.7866 (17) Å, 1 - x, 1 - y, 1 - z; where Cg1 = N1/C1–C4, Cg2 = N3–N6/C6, Cg3 = N2/C1–C5] stacking interactions (Fig. 3) help to link the molecules into a 2-D array obliquely parallel to (101) and propagating along the b axis.