organic compounds
5-Bromo-2-(4-fluorophenyl)-3-methylsulfinyl-1-benzofuran
aDepartment of Chemistry, Dongeui University, San 24 Kaya-dong Busanjin-gu, Busan 614-714, Republic of Korea, and bDepartment of Chemistry, Pukyong National University, 599-1 Daeyeon 3-dong, Nam-gu, Busan 608-737, Republic of Korea
*Correspondence e-mail: uklee@pknu.ac.kr
In the title compound, C15H10BrFO2S, the O atom and the methyl group of the methylsulfinyl substituent are located on opposite sides of the plane through the benzofuran fragment. The 4-fluorophenyl ring is rotated out of the benzofuran plane, as indicated by a dihedral angle of 26.23 (5)°. The is stabilized by a non-classical intermolecular C—H⋯O hydrogen bond and a Br⋯O halogen bond [3.163 (2) Å].
Related literature
For the crystal structures of similar 2-(4-fluorophenyl)-3-methylsulfinyl-1-benzofuran derivatives, see: Choi et al. (2009a,b). For the pharmacological activity of benzofuran compounds, see: Howlett et al. (1999); Twyman & Allsop (1999). For natural products with benzofuran ring systems, see: Akgul & Anil (2003); Soekamto et al. (2003). For a review of halogen bonding, see: Politzer et al. (2007).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2009); cell SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 1998); software used to prepare material for publication: SHELXL97.
Supporting information
10.1107/S1600536809052519/om2304sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809052519/om2304Isup2.hkl
77% 3-Chloroperoxybenzoic acid (179 mg, 0.8 mmol) was added in small portions to a stirred solution of 5-bromo-2-(4-fluorophenyl)-3-methylsulfanyl-1-benzofuran (270 mg, 0.8 mmol) in dichloromethane (20 mL) at 273 K. After being stirred at room temperature for 3h, the mixture was washed with saturated sodium bicarbonate solution and the organic layer was separated, dried over magnesium sulfate, filtered and concentrated in vacuum. The residue was purified by
(hexane–ethyl acetate, 1:1 v/v) to afford the title compound as a colorless solid [yield 87%, m.p. 498–499 K; Rf = 0.6 (hexane-ethyl acetate, 1:1 v/v)]. Single crystals suitable for X-ray diffraction were prepared by slow evaporation of a solution of the title compound in chloroforrm at room temperature.All H atoms were positioned geometrically and refined using a riding model, with C—H = 0.93 Å for aromatic H atoms and 0.96 Å for methyl H atoms, and with Uiso(H) = 1.2Ueq(C) for aromatic H atoms and 1.5Ueq(C) for methyl H atoms.
Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 1998); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).C15H10BrFO2S | Z = 2 |
Mr = 353.20 | F(000) = 352 |
Triclinic, P1 | Dx = 1.782 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 7.8908 (3) Å | Cell parameters from 8308 reflections |
b = 8.3434 (3) Å | θ = 2.6–27.6° |
c = 10.8349 (5) Å | µ = 3.29 mm−1 |
α = 94.886 (2)° | T = 173 K |
β = 91.995 (2)° | Block, colourless |
γ = 111.760 (2)° | 0.27 × 0.25 × 0.24 mm |
V = 658.39 (5) Å3 |
Bruker SMART APEXII CCD diffractometer | 3049 independent reflections |
Radiation source: Rotating Anode | 2844 reflections with I > 2σ(I) |
HELIOS monochromator | Rint = 0.023 |
Detector resolution: 10.0 pixels mm-1 | θmax = 27.6°, θmin = 1.9° |
ϕ and ω scans | h = −10→10 |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | k = −10→10 |
Tmin = 0.470, Tmax = 0.506 | l = −14→13 |
11517 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.025 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.068 | H-atom parameters constrained |
S = 1.06 | w = 1/[σ2(Fo2) + (0.0401P)2 + 0.3987P] where P = (Fo2 + 2Fc2)/3 |
3049 reflections | (Δ/σ)max < 0.001 |
182 parameters | Δρmax = 1.46 e Å−3 |
0 restraints | Δρmin = −0.41 e Å−3 |
C15H10BrFO2S | γ = 111.760 (2)° |
Mr = 353.20 | V = 658.39 (5) Å3 |
Triclinic, P1 | Z = 2 |
a = 7.8908 (3) Å | Mo Kα radiation |
b = 8.3434 (3) Å | µ = 3.29 mm−1 |
c = 10.8349 (5) Å | T = 173 K |
α = 94.886 (2)° | 0.27 × 0.25 × 0.24 mm |
β = 91.995 (2)° |
Bruker SMART APEXII CCD diffractometer | 3049 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | 2844 reflections with I > 2σ(I) |
Tmin = 0.470, Tmax = 0.506 | Rint = 0.023 |
11517 measured reflections |
R[F2 > 2σ(F2)] = 0.025 | 0 restraints |
wR(F2) = 0.068 | H-atom parameters constrained |
S = 1.06 | Δρmax = 1.46 e Å−3 |
3049 reflections | Δρmin = −0.41 e Å−3 |
182 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Br | 0.59276 (3) | 0.78959 (2) | 0.522986 (16) | 0.02546 (8) | |
S | 0.18837 (6) | 0.20974 (6) | 0.09974 (4) | 0.02096 (11) | |
F | −0.07131 (19) | 0.23126 (17) | −0.50519 (11) | 0.0366 (3) | |
O1 | 0.33521 (19) | 0.67998 (17) | −0.01307 (12) | 0.0208 (3) | |
O2 | 0.3267 (2) | 0.18958 (19) | 0.18682 (15) | 0.0317 (3) | |
C1 | 0.2611 (3) | 0.4325 (2) | 0.07889 (17) | 0.0188 (3) | |
C2 | 0.3627 (2) | 0.5753 (2) | 0.17069 (17) | 0.0187 (3) | |
C3 | 0.4185 (3) | 0.5927 (2) | 0.29638 (17) | 0.0203 (4) | |
H3 | 0.3911 | 0.4969 | 0.3410 | 0.024* | |
C4 | 0.5166 (3) | 0.7593 (2) | 0.35152 (17) | 0.0206 (4) | |
C5 | 0.5612 (3) | 0.9066 (2) | 0.28757 (18) | 0.0224 (4) | |
H5 | 0.6287 | 1.0157 | 0.3287 | 0.027* | |
C6 | 0.5049 (3) | 0.8900 (2) | 0.16288 (18) | 0.0222 (4) | |
H6 | 0.5320 | 0.9858 | 0.1183 | 0.027* | |
C7 | 0.4070 (3) | 0.7241 (2) | 0.10865 (16) | 0.0193 (3) | |
C8 | 0.2486 (2) | 0.5018 (2) | −0.02943 (17) | 0.0194 (3) | |
C9 | 0.1628 (3) | 0.4294 (2) | −0.15344 (16) | 0.0191 (3) | |
C10 | 0.0112 (3) | 0.2737 (3) | −0.17292 (18) | 0.0232 (4) | |
H10 | −0.0375 | 0.2150 | −0.1053 | 0.028* | |
C11 | −0.0679 (3) | 0.2050 (3) | −0.29139 (19) | 0.0251 (4) | |
H11 | −0.1676 | 0.1002 | −0.3045 | 0.030* | |
C12 | 0.0057 (3) | 0.2968 (3) | −0.38902 (17) | 0.0250 (4) | |
C13 | 0.1530 (3) | 0.4522 (3) | −0.37401 (18) | 0.0246 (4) | |
H13 | 0.1981 | 0.5111 | −0.4422 | 0.029* | |
C14 | 0.2329 (3) | 0.5193 (2) | −0.25552 (17) | 0.0213 (4) | |
H14 | 0.3329 | 0.6240 | −0.2436 | 0.026* | |
C15 | −0.0043 (3) | 0.1923 (3) | 0.1874 (2) | 0.0305 (4) | |
H15A | −0.0611 | 0.0755 | 0.2082 | 0.046* | |
H15B | −0.0908 | 0.2214 | 0.1389 | 0.046* | |
H15C | 0.0355 | 0.2705 | 0.2622 | 0.046* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Br | 0.03353 (13) | 0.02421 (11) | 0.01639 (11) | 0.00930 (8) | −0.00282 (7) | −0.00101 (7) |
S | 0.0236 (2) | 0.0167 (2) | 0.0229 (2) | 0.00744 (17) | 0.00343 (17) | 0.00380 (17) |
F | 0.0438 (8) | 0.0409 (7) | 0.0172 (6) | 0.0084 (6) | −0.0084 (5) | 0.0006 (5) |
O1 | 0.0264 (7) | 0.0196 (6) | 0.0153 (6) | 0.0072 (5) | −0.0008 (5) | 0.0030 (5) |
O2 | 0.0285 (8) | 0.0287 (7) | 0.0405 (9) | 0.0118 (6) | −0.0019 (6) | 0.0135 (6) |
C1 | 0.0219 (9) | 0.0174 (8) | 0.0172 (8) | 0.0073 (7) | 0.0020 (7) | 0.0022 (6) |
C2 | 0.0209 (9) | 0.0181 (8) | 0.0184 (8) | 0.0085 (7) | 0.0022 (7) | 0.0029 (7) |
C3 | 0.0251 (9) | 0.0194 (8) | 0.0178 (8) | 0.0095 (7) | 0.0016 (7) | 0.0033 (7) |
C4 | 0.0226 (9) | 0.0238 (9) | 0.0154 (8) | 0.0095 (7) | 0.0000 (7) | 0.0000 (7) |
C5 | 0.0244 (9) | 0.0186 (8) | 0.0221 (9) | 0.0063 (7) | 0.0013 (7) | −0.0008 (7) |
C6 | 0.0258 (9) | 0.0188 (8) | 0.0220 (9) | 0.0073 (7) | 0.0036 (7) | 0.0054 (7) |
C7 | 0.0220 (9) | 0.0211 (8) | 0.0152 (8) | 0.0085 (7) | 0.0011 (7) | 0.0025 (7) |
C8 | 0.0198 (9) | 0.0186 (8) | 0.0194 (8) | 0.0067 (7) | 0.0020 (7) | 0.0021 (7) |
C9 | 0.0222 (9) | 0.0216 (9) | 0.0158 (8) | 0.0109 (7) | 0.0014 (7) | 0.0025 (7) |
C10 | 0.0233 (9) | 0.0272 (9) | 0.0186 (9) | 0.0081 (8) | 0.0009 (7) | 0.0056 (7) |
C11 | 0.0235 (9) | 0.0250 (9) | 0.0233 (9) | 0.0055 (8) | −0.0019 (7) | 0.0024 (7) |
C12 | 0.0289 (10) | 0.0313 (10) | 0.0158 (9) | 0.0137 (8) | −0.0046 (7) | −0.0011 (7) |
C13 | 0.0298 (10) | 0.0294 (10) | 0.0168 (9) | 0.0126 (8) | 0.0034 (7) | 0.0066 (7) |
C14 | 0.0230 (9) | 0.0227 (9) | 0.0185 (9) | 0.0084 (7) | 0.0024 (7) | 0.0033 (7) |
C15 | 0.0285 (10) | 0.0310 (10) | 0.0355 (11) | 0.0124 (9) | 0.0119 (9) | 0.0124 (9) |
Br—C4 | 1.899 (2) | C6—C7 | 1.376 (3) |
Br—O2i | 3.163 (2) | C6—H6 | 0.9300 |
S—O2 | 1.484 (2) | C8—C9 | 1.457 (3) |
S—C1 | 1.767 (2) | C9—C10 | 1.395 (3) |
S—C15 | 1.788 (2) | C9—C14 | 1.403 (3) |
F—C12 | 1.355 (2) | C10—C11 | 1.385 (3) |
O1—C8 | 1.379 (2) | C10—H10 | 0.9300 |
O1—C7 | 1.381 (2) | C11—C12 | 1.376 (3) |
C1—C8 | 1.368 (2) | C11—H11 | 0.9300 |
C1—C2 | 1.445 (2) | C12—C13 | 1.375 (3) |
C2—C3 | 1.395 (2) | C13—C14 | 1.385 (3) |
C2—C7 | 1.397 (2) | C13—H13 | 0.9300 |
C3—C4 | 1.385 (3) | C14—H14 | 0.9300 |
C3—H3 | 0.9300 | C15—H15A | 0.9600 |
C4—C5 | 1.399 (3) | C15—H15B | 0.9600 |
C5—C6 | 1.386 (3) | C15—H15C | 0.9600 |
C5—H5 | 0.9300 | ||
C4—Br—O2i | 173.37 (7) | C1—C8—C9 | 134.25 (17) |
O2—S—C1 | 107.27 (9) | O1—C8—C9 | 115.24 (15) |
O2—S—C15 | 106.10 (10) | C10—C9—C14 | 119.18 (17) |
C1—S—C15 | 98.44 (9) | C10—C9—C8 | 121.53 (17) |
C8—O1—C7 | 106.96 (14) | C14—C9—C8 | 119.28 (17) |
C8—C1—C2 | 107.05 (16) | C11—C10—C9 | 121.04 (18) |
C8—C1—S | 126.79 (14) | C11—C10—H10 | 119.5 |
C2—C1—S | 125.87 (14) | C9—C10—H10 | 119.5 |
C3—C2—C7 | 118.99 (17) | C12—C11—C10 | 117.90 (19) |
C3—C2—C1 | 135.57 (17) | C12—C11—H11 | 121.0 |
C7—C2—C1 | 105.44 (15) | C10—C11—H11 | 121.0 |
C4—C3—C2 | 116.87 (16) | F—C12—C13 | 118.59 (18) |
C4—C3—H3 | 121.6 | F—C12—C11 | 118.35 (18) |
C2—C3—H3 | 121.6 | C13—C12—C11 | 123.06 (18) |
C3—C4—C5 | 123.33 (17) | C12—C13—C14 | 118.82 (18) |
C3—C4—Br | 118.36 (14) | C12—C13—H13 | 120.6 |
C5—C4—Br | 118.31 (14) | C14—C13—H13 | 120.6 |
C6—C5—C4 | 119.97 (17) | C13—C14—C9 | 119.98 (18) |
C6—C5—H5 | 120.0 | C13—C14—H14 | 120.0 |
C4—C5—H5 | 120.0 | C9—C14—H14 | 120.0 |
C7—C6—C5 | 116.46 (17) | S—C15—H15A | 109.5 |
C7—C6—H6 | 121.8 | S—C15—H15B | 109.5 |
C5—C6—H6 | 121.8 | H15A—C15—H15B | 109.5 |
C6—C7—O1 | 125.57 (16) | S—C15—H15C | 109.5 |
C6—C7—C2 | 124.38 (17) | H15A—C15—H15C | 109.5 |
O1—C7—C2 | 110.04 (15) | H15B—C15—H15C | 109.5 |
C1—C8—O1 | 110.50 (16) | ||
O2—S—C1—C8 | 141.05 (17) | C1—C2—C7—O1 | 1.3 (2) |
C15—S—C1—C8 | −109.09 (18) | C2—C1—C8—O1 | −0.1 (2) |
O2—S—C1—C2 | −31.88 (19) | S—C1—C8—O1 | −174.17 (13) |
C15—S—C1—C2 | 77.98 (18) | C2—C1—C8—C9 | −178.79 (19) |
C8—C1—C2—C3 | 178.7 (2) | S—C1—C8—C9 | 7.2 (3) |
S—C1—C2—C3 | −7.2 (3) | C7—O1—C8—C1 | 0.9 (2) |
C8—C1—C2—C7 | −0.7 (2) | C7—O1—C8—C9 | 179.87 (15) |
S—C1—C2—C7 | 173.40 (14) | C1—C8—C9—C10 | 26.6 (3) |
C7—C2—C3—C4 | −0.4 (3) | O1—C8—C9—C10 | −152.03 (17) |
C1—C2—C3—C4 | −179.7 (2) | C1—C8—C9—C14 | −154.2 (2) |
C2—C3—C4—C5 | −0.3 (3) | O1—C8—C9—C14 | 27.2 (2) |
C2—C3—C4—Br | 179.24 (13) | C14—C9—C10—C11 | 1.5 (3) |
C3—C4—C5—C6 | 0.8 (3) | C8—C9—C10—C11 | −179.23 (18) |
Br—C4—C5—C6 | −178.77 (14) | C9—C10—C11—C12 | −1.1 (3) |
C4—C5—C6—C7 | −0.5 (3) | C10—C11—C12—F | −179.63 (17) |
C5—C6—C7—O1 | 178.50 (17) | C10—C11—C12—C13 | 0.0 (3) |
C5—C6—C7—C2 | −0.2 (3) | F—C12—C13—C14 | −179.66 (17) |
C8—O1—C7—C6 | 179.73 (18) | C11—C12—C13—C14 | 0.7 (3) |
C8—O1—C7—C2 | −1.4 (2) | C12—C13—C14—C9 | −0.3 (3) |
C3—C2—C7—C6 | 0.7 (3) | C10—C9—C14—C13 | −0.8 (3) |
C1—C2—C7—C6 | −179.82 (18) | C8—C9—C14—C13 | 179.95 (16) |
C3—C2—C7—O1 | −178.21 (16) |
Symmetry code: (i) −x+1, −y+1, −z+1. |
D—H···A | D—H | H···A | D···A | D—H···A |
C14—H14···O2ii | 0.93 | 2.58 | 3.433 (3) | 153 |
Symmetry code: (ii) −x+1, −y+1, −z. |
Experimental details
Crystal data | |
Chemical formula | C15H10BrFO2S |
Mr | 353.20 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 173 |
a, b, c (Å) | 7.8908 (3), 8.3434 (3), 10.8349 (5) |
α, β, γ (°) | 94.886 (2), 91.995 (2), 111.760 (2) |
V (Å3) | 658.39 (5) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 3.29 |
Crystal size (mm) | 0.27 × 0.25 × 0.24 |
Data collection | |
Diffractometer | Bruker SMART APEXII CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2009) |
Tmin, Tmax | 0.470, 0.506 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 11517, 3049, 2844 |
Rint | 0.023 |
(sin θ/λ)max (Å−1) | 0.652 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.025, 0.068, 1.06 |
No. of reflections | 3049 |
No. of parameters | 182 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 1.46, −0.41 |
Computer programs: APEX2 (Bruker, 2009), SAINT (Bruker, 2009), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 1998).
D—H···A | D—H | H···A | D···A | D—H···A |
C14—H14···O2i | 0.93 | 2.58 | 3.433 (3) | 153.3 |
Symmetry code: (i) −x+1, −y+1, −z. |
References
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Molecules including benzofuran moiety are of considerable interest due to a variety of their pharmacological activities (Howlett et al., 1999; Twyman & Allsop, 1999) and these compounds are occurring in natural products (Akgul & Anil, 2003; Soekamto et al., 2003). As a part of our continuing studies of the effect of side chain substituents on the solid state structures of 2-(4-fluorophenyl)-3-methylsulfinyl-1-benzofuran analogues (Choi et al., 2009a, b), we report the crystal structure of the title compound (Fig. 1).
The benzofuran unit is essentially planar, with a mean deviation of 0.010 (2) Å from the least-squares plane defined by the nine constituent atoms. The dihedral angle formed by the plane of the benzofuran and the 4-fluorophenyl ring is 26.23 (5)Å. The crystal packing (Fig. 2) is stabilized by a non-classical intermolecular C—H···O hydrogen bond between the 4-fluorophenyl H atom and the oxygen of the S═O unit, with a C14—H14···O2i (Table 1), and a Br···O halogen bond between the bromine and the oxygen of the S═O unit [Br···O2ii = 3.163 (2) Å; C—Br···O2ii = 173.37 (7)°] (Politzer et al., 2007).