organic compounds
2-[3-(Methyldiphenylsilyl)propyl]isoindoline-1,3-dione
aDepartment of Chemistry, University of Wisconsin–Madison, 1101 University Ave, Madison, Wisconsin 53706, USA
*Correspondence e-mail: iguzei@chem.wisc.edu
In the title compound, C24H23NO2Si, the dihedral angle between the planes of the phenyl rings attached to the Si atom is 80.78 (10)°. In the crystal, the molecules form sheets lying perpendicular to [101] via C—H⋯O interactions. These sheets are stacked and linked in a three-dimensional framework by additional C—H⋯O interactions in the [10] direction.
Related literature
For literature related to drug design see: Bains & Tacke (2003); Gately & West (2007); Guzei et al. (2010a,b); Lee et al. (1996); Tsuge et al. (1985); Yoon et al. (1991); Zakai et al. (2010). For a description of the Cambridge Structural Database, see: Allen (2002). Bond distances and angles were confirmed to be typical by a Mogul structural check (Bruno et al., 2002).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 and GIS (Bruker, 2009); cell SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL, OLEX2 (Dolomanov et al., 2009) and FCF_filter (Guzei, 2007); molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL, modiCIFer (Guzei, 2007) and publCIF (Westrip, 2010).
Supporting information
10.1107/S1600536809054117/zs2024sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809054117/zs2024Isup2.hkl
The protocol described by Tsuge and co-workers (Tsuge et al., 1985) was adopted. The required amount of potassium phthalimide (7.42 g, 40 mmol, 1.1 equiv) was placed into a 250 ml round-bottom flask, which was then sealed and flushed with nitrogen three times. Dry DMF (56 ml) was syringed into the flask followed by the addition of chloropropyldiphenylmethylsilane (10 g, 36.46 mmol, 1 equiv.) The reaction was heated at 60°C for 6 h. The resulting mixture was allowed to cool to room temperature. This slurry was poured onto a minimal quantity of water and extracted 3–5 times with diethyl ether. The organic extracts were subsequently collected, dried with magnesium sulfate, and filtered. The filtrate was mixed with silica gel and evaporated under reduced pressure to afford a powder of silica gel. This powder was then loaded onto a dry-packed silica gel column and eluted using a gradient column. The fractions of interest were usually drawn out using a 8:2 hexane:ethyl acetate mixture. The fractions were then combined to afford the title compound. Further recrystallization from dichloromethane afforded large lusterous white crystals (12.47 g, 32.35 mmol, 89% yield) for X-ray crystallography. Manipulation of air and moisture sensitive compounds was performed using standard high-vacuum line techniques. All solvents and reagents were obtained from Aldrich. Chloropropyldiphenylmethylsilane was purchased from Gelest. 1H NMR spectra were obtained on a Varian Unity 500 spectrometer, 13C {H} NMR spectra were obtained on a Varian 500 spectrometer operating at 125 MHz, 29Si {H} NMR spectra were obtained on a Varian Unity spectrometer operating at 99 MHz. Mass spectra were determined on a Waters (Micromass) AutoSpec δ 0.52 (s, 3H, Me), 1.08 (m, 2H, CH2), 1.73 (m, 2H, CH2), 3.67 (t, J=7.3 Hz, 2H, CH2), 7.33 (m, 6H, ArH), 7.47 (dd, J=7.4, 1.5 Hz, 4H, ArH), 7.68 (dd, J=5.5, 3.0 Hz, 2H, ArH), 7.80 (dd, J=5.4, 3.1 Hz, 2H, ArH); 13C NMR (125 MHz, CDCl3) δ -4.6 (SiCH3), 11.5 (CH2), 23.2 (CH2), 40.9 (CH2), 123.1 (CH), 127.9 (CH), 129.2 (CH), 132.1 (CH), 133.8 (CH), 134.4 (CH), 136.6 (CH), 168.4 (CO); 29Si NMR (99 MHz, CDCl3) δ -7.62 (SiMePh2); MS (EI+) m/z (rel. intensity %) 385 (M+, 5), 370 (M—Me, 21), 308 (100), 266 (70), 197 (96), 160 (62): HRMS (EI+): calcd. for C24H23NO2Si (M+) 385.1493, found (M—Me)+ 370. 1258.
Melting points were determined on a Mel-Temp Laboratory Device. mp 57–58° C; 1H NMR (500 MHz, CDCl3)All H-atoms were placed in idealized locations and refined as riding with appropriate thermal displacement coefficients Uiso(H) = 1.2 or 1.5 times Ueq(bearing atom). The data were collected at room temperature on a Bruker SMART X2S diffractometer in the automated mode and manually processed thereafter.
Data collection: GIS (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008), OLEX2 (Dolomanov et al., 2009) and FCF_filter (Guzei, 2007); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008), modiCIFer (Guzei, 2007) and publCIF (Westrip, 2010).Fig. 1. Molecular structure of (I). The thermal ellipsoids are shown at 50% probability level. |
C24H23NO2Si | F(000) = 1632 |
Mr = 385.52 | Dx = 1.169 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2yc | Cell parameters from 3839 reflections |
a = 19.277 (3) Å | θ = 2.4–22.8° |
b = 13.238 (2) Å | µ = 0.13 mm−1 |
c = 19.272 (3) Å | T = 300 K |
β = 116.987 (6)° | Block, colourless |
V = 4382.5 (12) Å3 | 0.30 × 0.30 × 0.30 mm |
Z = 8 |
Bruker SMART X2S diffractometer | 4470 independent reflections |
Radiation source: micro-focus sealed tube | 2693 reflections with I > 2σ(I) |
Doubly curved silicon crystal monochromator | Rint = 0.051 |
ω scans | θmax = 26.5°, θmin = 1.9° |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | h = −23→21 |
Tmin = 0.964, Tmax = 0.964 | k = −16→16 |
15551 measured reflections | l = −20→24 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.053 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.175 | H-atom parameters constrained |
S = 1.02 | w = 1/[σ2(Fo2) + (0.102P)2] where P = (Fo2 + 2Fc2)/3 |
4470 reflections | (Δ/σ)max < 0.001 |
254 parameters | Δρmax = 0.20 e Å−3 |
0 restraints | Δρmin = −0.22 e Å−3 |
0 constraints |
C24H23NO2Si | V = 4382.5 (12) Å3 |
Mr = 385.52 | Z = 8 |
Monoclinic, C2/c | Mo Kα radiation |
a = 19.277 (3) Å | µ = 0.13 mm−1 |
b = 13.238 (2) Å | T = 300 K |
c = 19.272 (3) Å | 0.30 × 0.30 × 0.30 mm |
β = 116.987 (6)° |
Bruker SMART X2S diffractometer | 4470 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | 2693 reflections with I > 2σ(I) |
Tmin = 0.964, Tmax = 0.964 | Rint = 0.051 |
15551 measured reflections |
R[F2 > 2σ(F2)] = 0.053 | 0 restraints |
wR(F2) = 0.175 | H-atom parameters constrained |
S = 1.02 | Δρmax = 0.20 e Å−3 |
4470 reflections | Δρmin = −0.22 e Å−3 |
254 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Si1 | 0.49123 (4) | 0.69714 (5) | 0.07188 (4) | 0.0625 (2) | |
O1 | 0.22870 (10) | 0.74572 (11) | 0.13602 (10) | 0.0738 (5) | |
O2 | 0.28657 (14) | 0.41221 (13) | 0.16823 (14) | 0.1108 (8) | |
N1 | 0.26255 (10) | 0.57953 (12) | 0.13731 (11) | 0.0566 (5) | |
C1 | 0.52300 (14) | 0.67920 (17) | −0.00584 (15) | 0.0653 (6) | |
C2 | 0.47118 (17) | 0.6588 (2) | −0.08206 (16) | 0.0812 (8) | |
H2 | 0.4186 | 0.6520 | −0.0956 | 0.097* | |
C3 | 0.4956 (2) | 0.6483 (2) | −0.13887 (18) | 0.0995 (10) | |
H3 | 0.4593 | 0.6351 | −0.1900 | 0.119* | |
C4 | 0.5722 (2) | 0.6569 (2) | −0.1209 (2) | 0.0993 (10) | |
H4 | 0.5881 | 0.6496 | −0.1596 | 0.119* | |
C5 | 0.6249 (2) | 0.6761 (2) | −0.0473 (2) | 0.0980 (10) | |
H5 | 0.6773 | 0.6816 | −0.0349 | 0.118* | |
C6 | 0.60125 (16) | 0.6874 (2) | 0.01005 (19) | 0.0855 (8) | |
H6 | 0.6384 | 0.7010 | 0.0608 | 0.103* | |
C7 | 0.47864 (13) | 0.8354 (2) | 0.08261 (14) | 0.0651 (6) | |
C8 | 0.5175 (2) | 0.8887 (3) | 0.15175 (19) | 0.1228 (12) | |
H8 | 0.5505 | 0.8541 | 0.1967 | 0.147* | |
C9 | 0.5085 (3) | 0.9920 (4) | 0.1554 (3) | 0.1427 (17) | |
H9 | 0.5362 | 1.0256 | 0.2025 | 0.171* | |
C10 | 0.4601 (2) | 1.0448 (3) | 0.0918 (3) | 0.1084 (12) | |
H10 | 0.4534 | 1.1139 | 0.09050 | 0.130* | |
C11 | 0.42195 (19) | 0.9959 (2) | 0.0240 (2) | 0.1046 (10) | |
H11 | 0.3888 | 1.0313 | −0.0205 | 0.126* | |
C12 | 0.43174 (16) | 0.8933 (2) | 0.01984 (18) | 0.0872 (8) | |
H12 | 0.4050 | 0.8617 | −0.0282 | 0.105* | |
C13 | 0.56729 (17) | 0.6463 (3) | 0.16613 (16) | 0.1021 (10) | |
H13A | 0.6151 | 0.6823 | 0.1808 | 0.153* | |
H13B | 0.5753 | 0.5758 | 0.1603 | 0.153* | |
H13C | 0.5506 | 0.6545 | 0.2057 | 0.153* | |
C14 | 0.39646 (13) | 0.63048 (18) | 0.04274 (12) | 0.0603 (6) | |
H14A | 0.3568 | 0.6634 | −0.0030 | 0.072* | |
H14B | 0.4014 | 0.5616 | 0.0284 | 0.072* | |
C15 | 0.36934 (13) | 0.62798 (19) | 0.10561 (13) | 0.0630 (6) | |
H15A | 0.4053 | 0.5873 | 0.1489 | 0.076* | |
H15B | 0.3704 | 0.6960 | 0.1247 | 0.076* | |
C16 | 0.28795 (13) | 0.58526 (18) | 0.07650 (14) | 0.0635 (6) | |
H16A | 0.2518 | 0.6273 | 0.0344 | 0.076* | |
H16B | 0.2865 | 0.5181 | 0.0557 | 0.076* | |
C17 | 0.23600 (12) | 0.66153 (16) | 0.16301 (13) | 0.0539 (5) | |
C18 | 0.21922 (11) | 0.62472 (16) | 0.22621 (13) | 0.0542 (5) | |
C19 | 0.19309 (15) | 0.67446 (19) | 0.27256 (16) | 0.0721 (7) | |
H19 | 0.1810 | 0.7429 | 0.2658 | 0.086* | |
C20 | 0.18555 (18) | 0.6191 (2) | 0.32939 (17) | 0.0896 (8) | |
H20 | 0.1681 | 0.6508 | 0.3616 | 0.108* | |
C21 | 0.2033 (2) | 0.5187 (3) | 0.33913 (19) | 0.0996 (10) | |
H21 | 0.1974 | 0.4831 | 0.3777 | 0.120* | |
C22 | 0.22994 (18) | 0.4688 (2) | 0.29304 (19) | 0.0908 (9) | |
H22 | 0.2424 | 0.4005 | 0.3002 | 0.109* | |
C23 | 0.23748 (13) | 0.52346 (17) | 0.23615 (15) | 0.0636 (6) | |
C24 | 0.26513 (14) | 0.49367 (18) | 0.17894 (16) | 0.0691 (7) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Si1 | 0.0530 (4) | 0.0846 (5) | 0.0515 (4) | 0.0067 (3) | 0.0251 (3) | 0.0098 (3) |
O1 | 0.0954 (13) | 0.0496 (10) | 0.0769 (11) | 0.0033 (8) | 0.0396 (10) | 0.0045 (8) |
O2 | 0.158 (2) | 0.0577 (11) | 0.180 (2) | 0.0346 (11) | 0.1325 (19) | 0.0264 (12) |
N1 | 0.0634 (11) | 0.0494 (10) | 0.0682 (11) | 0.0020 (8) | 0.0397 (10) | 0.0031 (9) |
C1 | 0.0648 (15) | 0.0681 (15) | 0.0721 (16) | 0.0150 (11) | 0.0390 (13) | 0.0143 (12) |
C2 | 0.0806 (18) | 0.105 (2) | 0.0716 (17) | 0.0091 (15) | 0.0464 (15) | 0.0002 (15) |
C3 | 0.124 (3) | 0.115 (2) | 0.078 (2) | 0.015 (2) | 0.062 (2) | −0.0006 (17) |
C4 | 0.128 (3) | 0.096 (2) | 0.118 (3) | 0.030 (2) | 0.095 (3) | 0.017 (2) |
C5 | 0.089 (2) | 0.101 (2) | 0.137 (3) | 0.0220 (17) | 0.079 (2) | 0.024 (2) |
C6 | 0.0721 (18) | 0.106 (2) | 0.094 (2) | 0.0130 (14) | 0.0510 (16) | 0.0172 (16) |
C7 | 0.0525 (13) | 0.0877 (17) | 0.0616 (14) | −0.0116 (11) | 0.0314 (12) | −0.0121 (12) |
C8 | 0.155 (3) | 0.119 (3) | 0.073 (2) | −0.012 (2) | 0.033 (2) | −0.0198 (19) |
C9 | 0.204 (5) | 0.115 (3) | 0.110 (3) | −0.040 (3) | 0.072 (3) | −0.056 (3) |
C10 | 0.114 (3) | 0.086 (2) | 0.155 (4) | −0.017 (2) | 0.087 (3) | −0.035 (2) |
C11 | 0.082 (2) | 0.079 (2) | 0.132 (3) | −0.0013 (16) | 0.031 (2) | −0.014 (2) |
C12 | 0.0730 (17) | 0.0759 (19) | 0.088 (2) | −0.0038 (14) | 0.0153 (15) | −0.0160 (15) |
C13 | 0.0762 (19) | 0.147 (3) | 0.0691 (18) | 0.0160 (18) | 0.0204 (16) | 0.0311 (18) |
C14 | 0.0647 (14) | 0.0678 (14) | 0.0523 (12) | 0.0030 (11) | 0.0300 (11) | 0.0069 (10) |
C15 | 0.0629 (14) | 0.0735 (15) | 0.0577 (13) | −0.0023 (11) | 0.0318 (12) | 0.0032 (11) |
C16 | 0.0670 (15) | 0.0629 (14) | 0.0661 (15) | −0.0037 (11) | 0.0349 (13) | −0.0027 (11) |
C17 | 0.0511 (12) | 0.0451 (12) | 0.0595 (13) | −0.0003 (9) | 0.0198 (10) | −0.0006 (10) |
C18 | 0.0479 (12) | 0.0533 (12) | 0.0636 (13) | −0.0007 (9) | 0.0272 (11) | −0.0002 (10) |
C19 | 0.0773 (17) | 0.0658 (15) | 0.0805 (17) | 0.0008 (12) | 0.0422 (15) | −0.0088 (13) |
C20 | 0.101 (2) | 0.101 (2) | 0.090 (2) | 0.0022 (17) | 0.0634 (18) | −0.0063 (17) |
C21 | 0.117 (3) | 0.112 (3) | 0.101 (2) | 0.0117 (19) | 0.077 (2) | 0.0269 (19) |
C22 | 0.104 (2) | 0.0776 (18) | 0.121 (2) | 0.0234 (15) | 0.078 (2) | 0.0353 (17) |
C23 | 0.0628 (14) | 0.0561 (13) | 0.0859 (16) | 0.0079 (10) | 0.0461 (13) | 0.0131 (12) |
C24 | 0.0741 (16) | 0.0513 (14) | 0.1020 (19) | 0.0119 (11) | 0.0577 (15) | 0.0121 (12) |
Si1—C13 | 1.867 (3) | C10—H10 | 0.9300 |
Si1—C7 | 1.870 (3) | C11—C12 | 1.378 (4) |
Si1—C14 | 1.871 (2) | C11—H11 | 0.9300 |
Si1—C1 | 1.873 (3) | C12—H12 | 0.9300 |
O1—C17 | 1.211 (2) | C13—H13A | 0.9600 |
O2—C24 | 1.206 (3) | C13—H13B | 0.9600 |
N1—C24 | 1.379 (3) | C13—H13C | 0.9600 |
N1—C17 | 1.384 (3) | C14—C15 | 1.522 (3) |
N1—C16 | 1.463 (3) | C14—H14A | 0.9700 |
C1—C2 | 1.377 (4) | C14—H14B | 0.9700 |
C1—C6 | 1.401 (4) | C15—C16 | 1.516 (3) |
C2—C3 | 1.381 (4) | C15—H15A | 0.9700 |
C2—H2 | 0.9300 | C15—H15B | 0.9700 |
C3—C4 | 1.360 (4) | C16—H16A | 0.9700 |
C3—H3 | 0.9300 | C16—H16B | 0.9700 |
C4—C5 | 1.342 (5) | C17—C18 | 1.478 (3) |
C4—H4 | 0.9300 | C18—C19 | 1.376 (3) |
C5—C6 | 1.382 (4) | C18—C23 | 1.377 (3) |
C5—H5 | 0.9300 | C19—C20 | 1.379 (4) |
C6—H6 | 0.9300 | C19—H19 | 0.9300 |
C7—C12 | 1.369 (4) | C20—C21 | 1.364 (4) |
C7—C8 | 1.389 (4) | C20—H20 | 0.9300 |
C8—C9 | 1.384 (5) | C21—C22 | 1.379 (4) |
C8—H8 | 0.9300 | C21—H21 | 0.9300 |
C9—C10 | 1.351 (5) | C22—C23 | 1.375 (3) |
C9—H9 | 0.9300 | C22—H22 | 0.9300 |
C10—C11 | 1.340 (5) | C23—C24 | 1.479 (3) |
C13—Si1—C7 | 109.25 (14) | H13A—C13—H13B | 109.5 |
C13—Si1—C14 | 110.53 (12) | Si1—C13—H13C | 109.5 |
C7—Si1—C14 | 109.68 (11) | H13A—C13—H13C | 109.5 |
C13—Si1—C1 | 109.56 (13) | H13B—C13—H13C | 109.5 |
C7—Si1—C1 | 108.56 (10) | C15—C14—Si1 | 114.37 (15) |
C14—Si1—C1 | 109.22 (11) | C15—C14—H14A | 108.7 |
C24—N1—C17 | 111.09 (19) | Si1—C14—H14A | 108.7 |
C24—N1—C16 | 124.89 (18) | C15—C14—H14B | 108.7 |
C17—N1—C16 | 123.95 (18) | Si1—C14—H14B | 108.7 |
C2—C1—C6 | 115.9 (2) | H14A—C14—H14B | 107.6 |
C2—C1—Si1 | 122.39 (19) | C16—C15—C14 | 112.66 (18) |
C6—C1—Si1 | 121.7 (2) | C16—C15—H15A | 109.1 |
C1—C2—C3 | 121.5 (3) | C14—C15—H15A | 109.1 |
C1—C2—H2 | 119.3 | C16—C15—H15B | 109.1 |
C3—C2—H2 | 119.3 | C14—C15—H15B | 109.1 |
C4—C3—C2 | 120.8 (3) | H15A—C15—H15B | 107.8 |
C4—C3—H3 | 119.6 | N1—C16—C15 | 112.92 (18) |
C2—C3—H3 | 119.6 | N1—C16—H16A | 109.0 |
C5—C4—C3 | 119.8 (3) | C15—C16—H16A | 109.0 |
C5—C4—H4 | 120.1 | N1—C16—H16B | 109.0 |
C3—C4—H4 | 120.1 | C15—C16—H16B | 109.0 |
C4—C5—C6 | 120.1 (3) | H16A—C16—H16B | 107.8 |
C4—C5—H5 | 120.0 | O1—C17—N1 | 123.9 (2) |
C6—C5—H5 | 120.0 | O1—C17—C18 | 129.1 (2) |
C5—C6—C1 | 122.0 (3) | N1—C17—C18 | 106.93 (18) |
C5—C6—H6 | 119.0 | C19—C18—C23 | 121.4 (2) |
C1—C6—H6 | 119.0 | C19—C18—C17 | 131.2 (2) |
C12—C7—C8 | 114.6 (3) | C23—C18—C17 | 107.33 (19) |
C12—C7—Si1 | 121.12 (19) | C18—C19—C20 | 117.6 (2) |
C8—C7—Si1 | 124.2 (2) | C18—C19—H19 | 121.2 |
C9—C8—C7 | 121.7 (4) | C20—C19—H19 | 121.2 |
C9—C8—H8 | 119.2 | C21—C20—C19 | 121.1 (3) |
C7—C8—H8 | 119.2 | C21—C20—H20 | 119.5 |
C10—C9—C8 | 121.0 (3) | C19—C20—H20 | 119.5 |
C10—C9—H9 | 119.5 | C20—C21—C22 | 121.4 (3) |
C8—C9—H9 | 119.5 | C20—C21—H21 | 119.3 |
C11—C10—C9 | 118.9 (4) | C22—C21—H21 | 119.3 |
C11—C10—H10 | 116.0 | C23—C22—C21 | 117.8 (3) |
C9—C10—H10 | 125.0 | C23—C22—H22 | 121.1 |
C10—C11—C12 | 120.2 (4) | C21—C22—H22 | 121.1 |
C10—C11—H11 | 119.9 | C22—C23—C18 | 120.7 (2) |
C12—C11—H11 | 119.9 | C22—C23—C24 | 131.1 (2) |
C7—C12—C11 | 123.6 (3) | C18—C23—C24 | 108.15 (19) |
C7—C12—H12 | 118.2 | O2—C24—N1 | 124.2 (2) |
C11—C12—H12 | 118.2 | O2—C24—C23 | 129.3 (2) |
Si1—C13—H13A | 109.5 | N1—C24—C23 | 106.49 (19) |
Si1—C13—H13B | 109.5 | ||
C13—Si1—C1—C2 | 145.6 (2) | Si1—C14—C15—C16 | 172.75 (17) |
C7—Si1—C1—C2 | −95.1 (2) | C24—N1—C16—C15 | −98.5 (3) |
C14—Si1—C1—C2 | 24.4 (2) | C17—N1—C16—C15 | 78.4 (3) |
C13—Si1—C1—C6 | −35.4 (3) | C14—C15—C16—N1 | 178.08 (18) |
C7—Si1—C1—C6 | 83.8 (2) | C24—N1—C17—O1 | 179.8 (2) |
C14—Si1—C1—C6 | −156.6 (2) | C16—N1—C17—O1 | 2.5 (3) |
C6—C1—C2—C3 | −0.6 (4) | C24—N1—C17—C18 | −0.7 (2) |
Si1—C1—C2—C3 | 178.4 (2) | C16—N1—C17—C18 | −177.91 (18) |
C1—C2—C3—C4 | 0.6 (5) | O1—C17—C18—C19 | −1.8 (4) |
C2—C3—C4—C5 | −0.1 (5) | N1—C17—C18—C19 | 178.6 (2) |
C3—C4—C5—C6 | −0.4 (5) | O1—C17—C18—C23 | −179.6 (2) |
C4—C5—C6—C1 | 0.3 (4) | N1—C17—C18—C23 | 0.9 (2) |
C2—C1—C6—C5 | 0.2 (4) | C23—C18—C19—C20 | −0.2 (4) |
Si1—C1—C6—C5 | −178.8 (2) | C17—C18—C19—C20 | −177.7 (2) |
C13—Si1—C7—C12 | 173.6 (2) | C18—C19—C20—C21 | −0.1 (4) |
C14—Si1—C7—C12 | −65.2 (2) | C19—C20—C21—C22 | 0.4 (5) |
C1—Si1—C7—C12 | 54.1 (2) | C20—C21—C22—C23 | −0.5 (5) |
C13—Si1—C7—C8 | −3.2 (3) | C21—C22—C23—C18 | 0.3 (4) |
C14—Si1—C7—C8 | 118.1 (3) | C21—C22—C23—C24 | 178.8 (3) |
C1—Si1—C7—C8 | −122.6 (3) | C19—C18—C23—C22 | 0.1 (4) |
C12—C7—C8—C9 | 0.1 (5) | C17—C18—C23—C22 | 178.1 (2) |
Si1—C7—C8—C9 | 177.1 (3) | C19—C18—C23—C24 | −178.8 (2) |
C7—C8—C9—C10 | 1.2 (7) | C17—C18—C23—C24 | −0.8 (2) |
C8—C9—C10—C11 | −1.6 (7) | C17—N1—C24—O2 | −179.6 (3) |
C9—C10—C11—C12 | 0.6 (6) | C16—N1—C24—O2 | −2.4 (4) |
C8—C7—C12—C11 | −1.2 (4) | C17—N1—C24—C23 | 0.2 (3) |
Si1—C7—C12—C11 | −178.2 (2) | C16—N1—C24—C23 | 177.42 (18) |
C10—C11—C12—C7 | 0.9 (5) | C22—C23—C24—O2 | 1.4 (5) |
C13—Si1—C14—C15 | 52.0 (2) | C18—C23—C24—O2 | −179.9 (3) |
C7—Si1—C14—C15 | −68.50 (19) | C22—C23—C24—N1 | −178.4 (3) |
C1—Si1—C14—C15 | 172.63 (15) | C18—C23—C24—N1 | 0.4 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
C4—H4···O2i | 0.93 | 2.63 | 3.366 (4) | 137 |
C14—H14A···O1ii | 0.97 | 2.63 | 3.582 (3) | 169 |
C19—H19···O2iii | 0.93 | 2.51 | 3.310 (3) | 144 |
C22—H22···O1iv | 0.93 | 2.32 | 3.200 (3) | 157 |
Symmetry codes: (i) −x+1, −y+1, −z; (ii) −x+1/2, −y+3/2, −z; (iii) −x+1/2, y+1/2, −z+1/2; (iv) −x+1/2, y−1/2, −z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C24H23NO2Si |
Mr | 385.52 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 300 |
a, b, c (Å) | 19.277 (3), 13.238 (2), 19.272 (3) |
β (°) | 116.987 (6) |
V (Å3) | 4382.5 (12) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.13 |
Crystal size (mm) | 0.30 × 0.30 × 0.30 |
Data collection | |
Diffractometer | Bruker SMART X2S diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2009) |
Tmin, Tmax | 0.964, 0.964 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 15551, 4470, 2693 |
Rint | 0.051 |
(sin θ/λ)max (Å−1) | 0.627 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.053, 0.175, 1.02 |
No. of reflections | 4470 |
No. of parameters | 254 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.20, −0.22 |
Computer programs: GIS (Bruker, 2009), SAINT (Bruker, 2009), SHELXTL (Sheldrick, 2008), OLEX2 (Dolomanov et al., 2009) and FCF_filter (Guzei, 2007), SHELXTL (Sheldrick, 2008), modiCIFer (Guzei, 2007) and publCIF (Westrip, 2010).
D—H···A | D—H | H···A | D···A | D—H···A |
C4—H4···O2i | 0.93 | 2.63 | 3.366 (4) | 137 |
C14—H14A···O1ii | 0.97 | 2.63 | 3.582 (3) | 169 |
C19—H19···O2iii | 0.93 | 2.51 | 3.310 (3) | 144 |
C22—H22···O1iv | 0.93 | 2.32 | 3.200 (3) | 157 |
Symmetry codes: (i) −x+1, −y+1, −z; (ii) −x+1/2, −y+3/2, −z; (iii) −x+1/2, y+1/2, −z+1/2; (iv) −x+1/2, y−1/2, −z+1/2. |
Acknowledgements
We thank Dr N. J. Hill (UW-Madison) for acquiring the data and Professor R. West (UW-Madison) for his support. We gratefully acknowledge Bruker sponsorship of this publication and also acknowledge grants NIH 1 S10 RRO 8389–01 and NSF CHE-9629688 for providing NMR spectrometers, and grant NSF CHE-9304546 for providing the
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Sila phthalimides have been used in photocyclization reactions (Yoon et al., 1991), as protecting groups stabilizing reactive intermediates (Tsuge et al., 1985), and as reactants that undergo intramolecular hydrogen-abstraction (Lee et al., 1996). In our laboratory the title compound C24H23NO2Si (I) was isolated as an intermediate in the synthesis of the respective sila amine. It is a congener of 2-(((4-methoxyphenyl)dimethylsilyl)methyl)isoindoline-1,3-dione (Guzei et al., 2010a) and 2-(2-(trimethylsilyl)ethyl)isoindoline-1,3-dione (Guzei et al., 2010b) recently reported by us. These sila amines were subsequently coupled with a selection of pharmaceutical agents containing a carboxylic acid, including indomethacin and N-acetyl L-cysteine (Zakai et al., 2010) as part of our continuing efforts at drug repurposing (Gately & West, 2007) using silicon chemistry (Bains & Tacke, 2003).
In the structure of (I) the bond distances and angles are typical as confirmed by the Mogul structural check (Bruno et al., 2002). The average Si—C distance of 1.870 (3) Å for compound (I) is statistically similar to the 1.88 (2) Å average of 41 measurements for 10 related compounds in the Cambridge Structural Database (CSD; Version 1.11, September 2009 release; Allen, 2002). The Si atom exhibits a slightly imperfect tetrahedral geometry with angles ranging from 108.56 (10)° to 110.53 (12)°. The phthalate entity is expectedly planar within 0.0085 Å. The two phenyl groups exhibit a windmill-like geometry about the central silicon atom. The planes of the two phenyl groups form an angle of 80.78 (10)°. For 33 compounds in the CSD that have a central silicon atom with a methyl group, two phenyl groups and another arbitrary group attached, the planes between the two phenyl groups averaged 73 (9)°, similar to that of (I).
Each oxygen atom participates in two C—H···O interactions (Table 1) which help form the three-dimensional structure of (I). These weak interactions involving O2 form sheets of (I) perpendicular to [1 0 1]. These sheets are stacked and linked in the three-dimensional framework by the interactions involving O1 in the [1 0 1] direction.