organic compounds
endo-3,3-Dimethyl-4-oxobicyclo[3.1.0]hexan-2-yl methanesulfonate
aDepartment of Chemistry, University of Namur, 61 Rue de Bruxelles, B-5000 Namur, Belgium
*Correspondence e-mail: johan.wouters@fundp.ac.be
The endo isomer of the title compound, C9H14O4S, has been established and the conformation of the diastereoisomer is discussed. The five-membered ring adopts an The conformation of the methanesulfonate substituent is stabilized by intermolecular C—H⋯O hydrogen bonds. The crystal packing results in alternating layers of polar methanesulfonates and stacked bicyclohexanyl rings parallel to ab.
of theRelated literature
For related enantioselective syntheses, see: Krief (1994); Krief et al. (2000). For puckering parameters and theoretical torsion angles, see: Cremer & Pople (1975); Dunitz (1979).
Experimental
Crystal data
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Refinement
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Data collection: CrysAlis PRO (Oxford Diffraction, 2009); cell CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEPIII (Burnett & Johnson, 1996) and PLATON (Spek, 2009); software used to prepare material for publication: SHELXL97 .
Supporting information
10.1107/S1600536810010901/dn2550sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536810010901/dn2550Isup2.hkl
Synthesis of the compound will be detailed elsewhere.
Crystals were obtained by evaporation at 5°C of solutions in diethylether.
All H atoms were placed at idealized positions and allowed to ride on their parent atoms, with C—H = 0.97 Å and Uiso(H) = 1.2Ueq(C) for methylene groups and Uiso(H) = 1.5Ueq(C) for the methyl group.
Data collection: CrysAlis PRO (Oxford Diffraction, 2009); cell
CrysAlis PRO (Oxford Diffraction, 2009); data reduction: CrysAlis PRO (Oxford Diffraction, 2009); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEPIII (Burnett & Johnson, 1996) and PLATON (Spek, 2009); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).Fig. 1. Conformation (ORTEP view) of the title compound. Only H atoms on chiral carbons have been retained for clarity. Displacement ellipsoids for non-H atoms are drawn at the 30% probability level. |
C9H14O4S | Z = 2 |
Mr = 218.27 | F(000) = 232 |
Triclinic, P1 | Dx = 1.395 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 5.8558 (3) Å | Cell parameters from 2686 reflections |
b = 7.7497 (4) Å | θ = 3.2–32.6° |
c = 12.2527 (6) Å | µ = 0.30 mm−1 |
α = 84.290 (4)° | T = 293 K |
β = 79.531 (4)° | Prism, colorless |
γ = 72.070 (5)° | 0.35 × 0.14 × 0.12 mm |
V = 519.66 (5) Å3 |
Oxford Diffraction Xcalibur diffractometer with a Ruby (Gemini ultra Mo) detector | 3432 independent reflections |
Radiation source: fine-focus sealed tube | 2283 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.019 |
Detector resolution: 10.3712 pixels mm-1 | θmax = 32.6°, θmin = 3.2° |
ω scans | h = −8→8 |
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009) | k = −8→11 |
Tmin = 0.904, Tmax = 0.966 | l = −18→18 |
6128 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.046 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.130 | H-atom parameters constrained |
S = 0.99 | w = 1/[σ2(Fo2) + (0.0721P)2] where P = (Fo2 + 2Fc2)/3 |
3432 reflections | (Δ/σ)max < 0.001 |
130 parameters | Δρmax = 0.36 e Å−3 |
0 restraints | Δρmin = −0.31 e Å−3 |
C9H14O4S | γ = 72.070 (5)° |
Mr = 218.27 | V = 519.66 (5) Å3 |
Triclinic, P1 | Z = 2 |
a = 5.8558 (3) Å | Mo Kα radiation |
b = 7.7497 (4) Å | µ = 0.30 mm−1 |
c = 12.2527 (6) Å | T = 293 K |
α = 84.290 (4)° | 0.35 × 0.14 × 0.12 mm |
β = 79.531 (4)° |
Oxford Diffraction Xcalibur diffractometer with a Ruby (Gemini ultra Mo) detector | 3432 independent reflections |
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009) | 2283 reflections with I > 2σ(I) |
Tmin = 0.904, Tmax = 0.966 | Rint = 0.019 |
6128 measured reflections |
R[F2 > 2σ(F2)] = 0.046 | 0 restraints |
wR(F2) = 0.130 | H-atom parameters constrained |
S = 0.99 | Δρmax = 0.36 e Å−3 |
3432 reflections | Δρmin = −0.31 e Å−3 |
130 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.1819 (3) | 0.4668 (2) | 0.66360 (15) | 0.0492 (4) | |
H1 | 0.0668 | 0.4050 | 0.6508 | 0.059* | |
C2 | 0.1965 (3) | 0.6346 (2) | 0.59887 (13) | 0.0422 (3) | |
C3 | 0.2668 (3) | 0.75983 (19) | 0.66753 (13) | 0.0377 (3) | |
C4 | 0.2405 (3) | 0.6746 (2) | 0.78727 (12) | 0.0383 (3) | |
H4 | 0.0950 | 0.7502 | 0.8323 | 0.046* | |
C5 | 0.2143 (3) | 0.4885 (2) | 0.78131 (14) | 0.0474 (4) | |
H5 | 0.1187 | 0.4400 | 0.8439 | 0.057* | |
C6 | 0.4088 (4) | 0.3618 (2) | 0.70955 (15) | 0.0534 (4) | |
H6A | 0.4345 | 0.2330 | 0.7265 | 0.064* | |
H6B | 0.5558 | 0.3956 | 0.6814 | 0.064* | |
C7 | 0.5212 (3) | 0.7725 (3) | 0.61787 (15) | 0.0556 (5) | |
H7A | 0.6366 | 0.6539 | 0.6194 | 0.083* | |
H7B | 0.5646 | 0.8515 | 0.6606 | 0.083* | |
H7C | 0.5216 | 0.8202 | 0.5425 | 0.083* | |
C8 | 0.0812 (4) | 0.9504 (2) | 0.66350 (19) | 0.0642 (5) | |
H8A | 0.1226 | 1.0300 | 0.7066 | 0.096* | |
H8B | −0.0787 | 0.9425 | 0.6935 | 0.096* | |
H8C | 0.0843 | 0.9972 | 0.5879 | 0.096* | |
C9 | 0.2608 (3) | 0.7738 (2) | 1.04091 (14) | 0.0503 (4) | |
H9A | 0.2548 | 0.8619 | 1.0920 | 0.075* | |
H9B | 0.3173 | 0.6540 | 1.0740 | 0.075* | |
H9C | 0.1012 | 0.7930 | 1.0235 | 0.075* | |
O1 | 0.1502 (3) | 0.67456 (18) | 0.50596 (10) | 0.0606 (4) | |
O2 | 0.4535 (2) | 0.64888 (14) | 0.84223 (9) | 0.0421 (3) | |
O3 | 0.3691 (3) | 0.97232 (17) | 0.87030 (11) | 0.0717 (4) | |
O4 | 0.7018 (2) | 0.7375 (2) | 0.94357 (12) | 0.0761 (5) | |
S1 | 0.45905 (8) | 0.79673 (6) | 0.91953 (3) | 0.04398 (14) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0598 (11) | 0.0458 (9) | 0.0546 (10) | −0.0288 (8) | −0.0180 (8) | −0.0019 (7) |
C2 | 0.0405 (8) | 0.0438 (8) | 0.0452 (8) | −0.0140 (7) | −0.0116 (6) | −0.0025 (7) |
C3 | 0.0408 (8) | 0.0344 (7) | 0.0426 (8) | −0.0156 (6) | −0.0133 (6) | 0.0027 (6) |
C4 | 0.0353 (7) | 0.0398 (8) | 0.0421 (8) | −0.0143 (6) | −0.0058 (6) | −0.0031 (6) |
C5 | 0.0589 (10) | 0.0487 (9) | 0.0438 (9) | −0.0314 (8) | −0.0089 (7) | 0.0059 (7) |
C6 | 0.0680 (12) | 0.0369 (8) | 0.0601 (11) | −0.0172 (8) | −0.0211 (9) | 0.0017 (7) |
C7 | 0.0600 (11) | 0.0673 (12) | 0.0508 (10) | −0.0390 (10) | −0.0052 (8) | 0.0036 (9) |
C8 | 0.0767 (14) | 0.0400 (9) | 0.0783 (13) | −0.0074 (9) | −0.0359 (11) | −0.0025 (9) |
C9 | 0.0526 (10) | 0.0515 (10) | 0.0414 (8) | −0.0116 (8) | 0.0001 (7) | −0.0030 (7) |
O1 | 0.0771 (9) | 0.0638 (8) | 0.0499 (7) | −0.0244 (7) | −0.0290 (6) | 0.0015 (6) |
O2 | 0.0476 (6) | 0.0399 (6) | 0.0409 (6) | −0.0116 (5) | −0.0131 (5) | −0.0061 (4) |
O3 | 0.1261 (14) | 0.0447 (7) | 0.0544 (8) | −0.0425 (8) | −0.0113 (8) | 0.0004 (6) |
O4 | 0.0484 (8) | 0.1248 (13) | 0.0661 (9) | −0.0348 (8) | −0.0039 (6) | −0.0363 (9) |
S1 | 0.0507 (3) | 0.0491 (2) | 0.0385 (2) | −0.02405 (19) | −0.00324 (16) | −0.00920 (16) |
C1—C2 | 1.472 (2) | C6—H6B | 0.9700 |
C1—C6 | 1.503 (2) | C7—H7A | 0.9600 |
C1—C5 | 1.521 (2) | C7—H7B | 0.9600 |
C1—H1 | 0.9800 | C7—H7C | 0.9600 |
C2—O1 | 1.2066 (19) | C8—H8A | 0.9600 |
C2—C3 | 1.534 (2) | C8—H8B | 0.9600 |
C3—C7 | 1.532 (2) | C8—H8C | 0.9600 |
C3—C8 | 1.543 (2) | C9—S1 | 1.7429 (17) |
C3—C4 | 1.549 (2) | C9—H9A | 0.9600 |
C4—O2 | 1.4747 (17) | C9—H9B | 0.9600 |
C4—C5 | 1.506 (2) | C9—H9C | 0.9600 |
C4—H4 | 0.9800 | O2—S1 | 1.5687 (11) |
C5—C6 | 1.467 (3) | O3—S1 | 1.4156 (14) |
C5—H5 | 0.9800 | O4—S1 | 1.4287 (14) |
C6—H6A | 0.9700 | ||
C2—C1—C6 | 114.72 (14) | C1—C6—H6A | 117.6 |
C2—C1—C5 | 107.13 (13) | C5—C6—H6B | 117.6 |
C6—C1—C5 | 58.06 (11) | C1—C6—H6B | 117.6 |
C2—C1—H1 | 120.3 | H6A—C6—H6B | 114.7 |
C6—C1—H1 | 120.3 | C3—C7—H7A | 109.5 |
C5—C1—H1 | 120.3 | C3—C7—H7B | 109.5 |
O1—C2—C1 | 125.52 (15) | H7A—C7—H7B | 109.5 |
O1—C2—C3 | 123.47 (14) | C3—C7—H7C | 109.5 |
C1—C2—C3 | 110.94 (13) | H7A—C7—H7C | 109.5 |
C7—C3—C2 | 109.53 (13) | H7B—C7—H7C | 109.5 |
C7—C3—C8 | 109.33 (15) | C3—C8—H8A | 109.5 |
C2—C3—C8 | 108.62 (13) | C3—C8—H8B | 109.5 |
C7—C3—C4 | 115.62 (13) | H8A—C8—H8B | 109.5 |
C2—C3—C4 | 103.93 (11) | C3—C8—H8C | 109.5 |
C8—C3—C4 | 109.53 (14) | H8A—C8—H8C | 109.5 |
O2—C4—C5 | 106.44 (12) | H8B—C8—H8C | 109.5 |
O2—C4—C3 | 113.84 (11) | S1—C9—H9A | 109.5 |
C5—C4—C3 | 108.08 (12) | S1—C9—H9B | 109.5 |
O2—C4—H4 | 109.5 | H9A—C9—H9B | 109.5 |
C5—C4—H4 | 109.5 | S1—C9—H9C | 109.5 |
C3—C4—H4 | 109.5 | H9A—C9—H9C | 109.5 |
C6—C5—C4 | 116.56 (15) | H9B—C9—H9C | 109.5 |
C6—C5—C1 | 60.38 (11) | C4—O2—S1 | 120.23 (9) |
C4—C5—C1 | 108.34 (13) | O3—S1—O4 | 119.56 (10) |
C6—C5—H5 | 119.1 | O3—S1—O2 | 110.12 (7) |
C4—C5—H5 | 119.1 | O4—S1—O2 | 103.74 (8) |
C1—C5—H5 | 119.1 | O3—S1—C9 | 108.61 (9) |
C5—C6—C1 | 61.56 (12) | O4—S1—C9 | 108.62 (9) |
C5—C6—H6A | 117.6 | O2—S1—C9 | 105.24 (8) |
C6—C1—C2—O1 | 127.22 (19) | C8—C3—C4—C5 | 128.36 (15) |
C5—C1—C2—O1 | −170.65 (18) | O2—C4—C5—C6 | −66.42 (17) |
C6—C1—C2—C3 | −55.74 (19) | C3—C4—C5—C6 | 56.24 (18) |
C5—C1—C2—C3 | 6.39 (18) | O2—C4—C5—C1 | −131.81 (14) |
O1—C2—C3—C7 | −70.5 (2) | C3—C4—C5—C1 | −9.15 (18) |
C1—C2—C3—C7 | 112.43 (15) | C2—C1—C5—C6 | −108.87 (16) |
O1—C2—C3—C8 | 48.9 (2) | C2—C1—C5—C4 | 1.83 (19) |
C1—C2—C3—C8 | −128.22 (16) | C6—C1—C5—C4 | 110.70 (16) |
O1—C2—C3—C4 | 165.44 (17) | C4—C5—C6—C1 | −96.92 (16) |
C1—C2—C3—C4 | −11.67 (17) | C2—C1—C6—C5 | 95.46 (16) |
C7—C3—C4—O2 | 10.41 (18) | C5—C4—O2—S1 | −146.30 (11) |
C2—C3—C4—O2 | 130.47 (12) | C3—C4—O2—S1 | 94.74 (13) |
C8—C3—C4—O2 | −113.62 (15) | C4—O2—S1—O3 | −42.98 (13) |
C7—C3—C4—C5 | −107.61 (15) | C4—O2—S1—O4 | −172.07 (11) |
C2—C3—C4—C5 | 12.45 (16) | C4—O2—S1—C9 | 73.90 (12) |
D—H···A | D—H | H···A | D···A | D—H···A |
C4—H4···O4i | 0.98 | 2.48 | 3.302 (4) | 141 |
C9—H9B···O2ii | 0.96 | 2.54 | 3.485 (2) | 169 |
Symmetry codes: (i) x−1, y, z; (ii) −x+1, −y+1, −z+2. |
Experimental details
Crystal data | |
Chemical formula | C9H14O4S |
Mr | 218.27 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 293 |
a, b, c (Å) | 5.8558 (3), 7.7497 (4), 12.2527 (6) |
α, β, γ (°) | 84.290 (4), 79.531 (4), 72.070 (5) |
V (Å3) | 519.66 (5) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.30 |
Crystal size (mm) | 0.35 × 0.14 × 0.12 |
Data collection | |
Diffractometer | Oxford Diffraction Xcalibur diffractometer with a Ruby (Gemini ultra Mo) detector |
Absorption correction | Multi-scan (CrysAlis PRO; Oxford Diffraction, 2009) |
Tmin, Tmax | 0.904, 0.966 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 6128, 3432, 2283 |
Rint | 0.019 |
(sin θ/λ)max (Å−1) | 0.759 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.046, 0.130, 0.99 |
No. of reflections | 3432 |
No. of parameters | 130 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.36, −0.31 |
Computer programs: CrysAlis PRO (Oxford Diffraction, 2009), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEPIII (Burnett & Johnson, 1996) and PLATON (Spek, 2009).
C5—C1—C2—C3 | 6.39 (18) | C2—C1—C5—C4 | 1.83 (19) |
C1—C2—C3—C4 | −11.67 (17) | C3—C4—O2—S1 | 94.74 (13) |
C2—C3—C4—C5 | 12.45 (16) | C4—O2—S1—C9 | 73.90 (12) |
D—H···A | D—H | H···A | D···A | D—H···A |
C4—H4···O4i | 0.98 | 2.48 | 3.302 (4) | 141 |
C9—H9B···O2ii | 0.96 | 2.54 | 3.485 (2) | 169 |
Symmetry codes: (i) x−1, y, z; (ii) −x+1, −y+1, −z+2. |
Acknowledgements
This work was supported in part by the Fonds National de la Recherche Scientifique (FNRS, Belgium).
References
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Dunitz, J. (1979). X-ray Analysis and the Structure of Organic Molecules, p. 429, Ithaca: Cornell University Press. Google Scholar
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
In the course of a work involving the enantioselective synthesis of didesmethyl-deltametrinic acid (Krief et al., 2000; Krief, 1994) both the exo and endo isomers of 3,3-dimethyl-4-oxobicyclo[3.1.0]hexan-2-yl methanesulfonate were synthesized and characterized.
The X-ray crystallography study reported here determined the relative stereochemistry of the endo diasteroisomer : C(1) S, C(4) R, and C(5) R. The compound crystallizing in a centrosymetric space group, one obtains the racemic mixture S,R,R/R,S,S.
The five-membered ring C1—C5 adopts an envelope conformation. Puckering parameter Phi is 260.1 (8)° and close to the expected value of k x 36° (Cremer & Pople, 1975), suggesting that the presence of a sp2 carbon (C2) in the five-membered ring does not significantly distort its conformation. The observed values of torsion angles defining the C1—C5 ring (Table 1) fairly well follow the theoretical sequence of torsion angles -ω1, ω2, -ω2, ω1 and 0 (Dunitz, 1979) characteristic of an envelope conformation.
Atom C6 of the fused three-membered ring deviates by +1.250 (2) Å from the mean plane defined by the five atoms of the C1—C5 ring (Figure 1).
Steric effects resulting from C6 being in cis of the mesylate substituent on O2, constrain the conformation of the methanesulfonate group. Positions of the oxygen atoms O3 and O4 of the sulfonate group are further explained by intra and intermolecular CH···O hydrogen bondings. Indeed O3 forms an intramolecular H bond [O3···H4 = 2.81 Å] with H4 of C4 that carries the mesylate. An intermolecular H bond with H4 further involves O4 [C(4)—H4 ··· O4i: D···A = 3.302 (4) Å; H···A = 2.48 Å; D - H···A = 141°, i = x-1,y,z].
Packing is also reinforced by van der Waals interactions resulting in alterning layers of polar methanesulfonates and stacked bicyclohexanyl rings parallel to the ab cell planes.