organic compounds
(3S,4S)-1-Benzylpyrrolidine-3,4-diol
aDepartment of Chemistry, School of Pharmacy, Fourth Military Medical University, Changle West Road 17, 710032, Xi-An, People's Republic of China
*Correspondence e-mail: ping_an1718@yahoo.com.cn
In the title compound, C11H15NO2, the pyrrolidine ring adapts a twisted and the two hydroxyl groups are arranged in a trans conformation. The crystal packing is stabilized by intermolecular O—H⋯N and O—H⋯O hydrogen bonds. A weak C—H⋯π interaction also occurs.
Related literature
For the preparation of the title compound, see: Nagel et al. (1984); Inoguchi et al. (1990). The title compound is used in the preparation of the chiral phosphine ligand DEGphos, (+)-(3R,4R)-N-benzyl-3,4-bis(diphenylphosphino)pyrrolidine, (Nagel et al., 1984), an efficient ligand for Rh-catalysed asymmetric hydrogenation (Tang & Zhang, 2003).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2008); cell SAINT (Bruker); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: Mercury (Macrae et al., 2006) and CAMERON (Watkin et al., 1996).
Supporting information
10.1107/S1600536809055391/jj2016sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809055391/jj2016Isup2.hkl
The synthesis of the title compound is described by Nagel et al. (1984). Crystals were grown from its solution in acetone; m.p. 371–373 K.
The
could not be established from the dffraction data and was assigned based on L-tartaric acid the starting material.All the H atoms were located in difference Fourier maps. However, they were constrained by riding model approximation. C—Hmethyl=0.97 Å; C—Haryl=0.93 Å; UisoHmethyl and UisoHaryl are both 1.2 U eq(C). O—H is 0.82Å with Uiso(H)=1.5Ueq(O).
Data collection: APEX2 (Bruker, 2008); cell
SAINT (Bruker); data reduction: SAINT (Bruker); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: Mercury (Macrae et al., 2006) and CAMERON (Watkin et al., 1996).C11H15NO2 | F(000) = 208 |
Mr = 193.24 | Dx = 1.271 Mg m−3 |
Monoclinic, P21 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2yb | Cell parameters from 1279 reflections |
a = 6.0244 (10) Å | θ = 3.2–25.6° |
b = 8.1033 (14) Å | µ = 0.09 mm−1 |
c = 10.3981 (18) Å | T = 293 K |
β = 96.016 (2)° | Block, colorless |
V = 504.81 (15) Å3 | 0.31 × 0.27 × 0.14 mm |
Z = 2 |
Bruker APEXII CCD diffractometer | 1440 independent reflections |
Radiation source: fine-focus sealed tube | 1348 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.000 |
ϕ and ω scans | θmax = 25.1°, θmin = 2.0° |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | h = −7→7 |
Tmin = 0.973, Tmax = 0.987 | k = −8→9 |
1440 measured reflections | l = 0→12 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.032 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.105 | H-atom parameters constrained |
S = 1.03 | w = 1/[σ2(Fo2) + (0.080P)2] where P = (Fo2 + 2Fc2)/3 |
1440 reflections | (Δ/σ)max < 0.001 |
125 parameters | Δρmax = 0.15 e Å−3 |
1 restraint | Δρmin = −0.11 e Å−3 |
C11H15NO2 | V = 504.81 (15) Å3 |
Mr = 193.24 | Z = 2 |
Monoclinic, P21 | Mo Kα radiation |
a = 6.0244 (10) Å | µ = 0.09 mm−1 |
b = 8.1033 (14) Å | T = 293 K |
c = 10.3981 (18) Å | 0.31 × 0.27 × 0.14 mm |
β = 96.016 (2)° |
Bruker APEXII CCD diffractometer | 1440 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 1348 reflections with I > 2σ(I) |
Tmin = 0.973, Tmax = 0.987 | Rint = 0.000 |
1440 measured reflections |
R[F2 > 2σ(F2)] = 0.032 | 1 restraint |
wR(F2) = 0.105 | H-atom parameters constrained |
S = 1.03 | Δρmax = 0.15 e Å−3 |
1440 reflections | Δρmin = −0.11 e Å−3 |
125 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
N1 | 0.5935 (2) | −0.00443 (18) | 0.18867 (14) | 0.0358 (4) | |
O1 | 0.3213 (2) | −0.36878 (18) | 0.06145 (13) | 0.0451 (4) | |
H1 | 0.3166 | −0.4139 | −0.0094 | 0.068* | |
O2 | 0.8566 (2) | −0.2626 (2) | 0.03312 (13) | 0.0556 (5) | |
H2 | 0.9802 | −0.2956 | 0.0628 | 0.083* | |
C1 | 0.7231 (4) | 0.3493 (3) | 0.42248 (18) | 0.0511 (6) | |
H1A | 0.6080 | 0.3348 | 0.4744 | 0.061* | |
C2 | 0.8766 (4) | 0.4734 (3) | 0.4518 (2) | 0.0602 (6) | |
H2A | 0.8637 | 0.5423 | 0.5221 | 0.072* | |
C3 | 1.0500 (4) | 0.4951 (3) | 0.3760 (2) | 0.0582 (6) | |
H3 | 1.1551 | 0.5777 | 0.3958 | 0.070* | |
C4 | 1.0660 (4) | 0.3935 (3) | 0.2711 (2) | 0.0485 (5) | |
H4 | 1.1814 | 0.4084 | 0.2195 | 0.058* | |
C5 | 0.9109 (3) | 0.2693 (3) | 0.24219 (17) | 0.0420 (5) | |
H5 | 0.9242 | 0.2010 | 0.1715 | 0.050* | |
C6 | 0.7361 (3) | 0.2451 (3) | 0.31701 (16) | 0.0387 (4) | |
C7 | 0.5566 (3) | 0.1179 (3) | 0.28805 (19) | 0.0469 (5) | |
H7A | 0.5373 | 0.0596 | 0.3676 | 0.056* | |
H7B | 0.4178 | 0.1750 | 0.2615 | 0.056* | |
C8 | 0.3888 (3) | −0.0952 (3) | 0.14674 (19) | 0.0395 (5) | |
H8A | 0.2820 | −0.0258 | 0.0956 | 0.047* | |
H8B | 0.3203 | −0.1384 | 0.2201 | 0.047* | |
C9 | 0.4714 (3) | −0.2340 (2) | 0.06555 (16) | 0.0359 (4) | |
H9 | 0.4813 | −0.1938 | −0.0226 | 0.043* | |
C10 | 0.7077 (3) | −0.2710 (2) | 0.13021 (16) | 0.0371 (4) | |
H10 | 0.7130 | −0.3806 | 0.1702 | 0.045* | |
C11 | 0.7500 (3) | −0.1372 (3) | 0.23333 (17) | 0.0408 (5) | |
H11A | 0.7195 | −0.1779 | 0.3174 | 0.049* | |
H11B | 0.9032 | −0.0987 | 0.2389 | 0.049* |
U11 | U22 | U33 | U12 | U13 | U23 | |
N1 | 0.0299 (8) | 0.0321 (8) | 0.0458 (8) | −0.0001 (7) | 0.0055 (6) | −0.0030 (6) |
O1 | 0.0388 (8) | 0.0407 (8) | 0.0567 (7) | −0.0100 (6) | 0.0099 (6) | −0.0062 (6) |
O2 | 0.0317 (7) | 0.0791 (12) | 0.0574 (8) | 0.0028 (8) | 0.0111 (6) | −0.0130 (8) |
C1 | 0.0573 (13) | 0.0502 (14) | 0.0466 (11) | 0.0031 (11) | 0.0097 (9) | −0.0049 (9) |
C2 | 0.0732 (16) | 0.0519 (15) | 0.0531 (12) | 0.0015 (12) | −0.0049 (11) | −0.0135 (11) |
C3 | 0.0554 (14) | 0.0422 (13) | 0.0724 (13) | −0.0059 (11) | −0.0154 (11) | −0.0048 (11) |
C4 | 0.0393 (11) | 0.0412 (12) | 0.0639 (11) | −0.0001 (9) | 0.0010 (9) | 0.0071 (10) |
C5 | 0.0413 (11) | 0.0373 (11) | 0.0479 (9) | 0.0021 (9) | 0.0068 (8) | −0.0020 (8) |
C6 | 0.0412 (10) | 0.0329 (10) | 0.0419 (8) | 0.0043 (9) | 0.0038 (7) | −0.0011 (8) |
C7 | 0.0447 (12) | 0.0407 (11) | 0.0578 (11) | 0.0001 (10) | 0.0176 (10) | −0.0067 (10) |
C8 | 0.0293 (10) | 0.0364 (11) | 0.0527 (10) | 0.0002 (8) | 0.0043 (8) | −0.0003 (8) |
C9 | 0.0307 (9) | 0.0342 (11) | 0.0430 (8) | −0.0024 (8) | 0.0045 (7) | 0.0023 (8) |
C10 | 0.0316 (10) | 0.0351 (10) | 0.0447 (9) | 0.0036 (8) | 0.0046 (7) | 0.0017 (8) |
C11 | 0.0374 (11) | 0.0396 (11) | 0.0446 (9) | 0.0040 (9) | 0.0001 (7) | 0.0001 (8) |
N1—C8 | 1.463 (2) | C4—H4 | 0.9300 |
N1—C7 | 1.466 (2) | C5—C6 | 1.387 (3) |
N1—C11 | 1.473 (3) | C5—H5 | 0.9300 |
O1—C9 | 1.416 (2) | C6—C7 | 1.501 (3) |
O1—H1 | 0.8200 | C7—H7A | 0.9700 |
O2—C10 | 1.421 (2) | C7—H7B | 0.9700 |
O2—H2 | 0.8200 | C8—C9 | 1.521 (3) |
C1—C2 | 1.379 (3) | C8—H8A | 0.9700 |
C1—C6 | 1.393 (3) | C8—H8B | 0.9700 |
C1—H1A | 0.9300 | C9—C10 | 1.539 (2) |
C2—C3 | 1.384 (3) | C9—H9 | 0.9800 |
C2—H2A | 0.9300 | C10—C11 | 1.528 (3) |
C3—C4 | 1.378 (3) | C10—H10 | 0.9800 |
C3—H3 | 0.9300 | C11—H11A | 0.9700 |
C4—C5 | 1.385 (3) | C11—H11B | 0.9700 |
C8—N1—C7 | 111.39 (14) | C6—C7—H7B | 108.2 |
C8—N1—C11 | 102.61 (14) | H7A—C7—H7B | 107.3 |
C7—N1—C11 | 114.28 (14) | N1—C8—C9 | 102.85 (15) |
C9—O1—H1 | 109.5 | N1—C8—H8A | 111.2 |
C10—O2—H2 | 109.5 | C9—C8—H8A | 111.2 |
C2—C1—C6 | 121.6 (2) | N1—C8—H8B | 111.2 |
C2—C1—H1A | 119.2 | C9—C8—H8B | 111.2 |
C6—C1—H1A | 119.2 | H8A—C8—H8B | 109.1 |
C1—C2—C3 | 119.7 (2) | O1—C9—C8 | 109.99 (14) |
C1—C2—H2A | 120.1 | O1—C9—C10 | 114.91 (16) |
C3—C2—H2A | 120.1 | C8—C9—C10 | 104.09 (15) |
C4—C3—C2 | 119.6 (2) | O1—C9—H9 | 109.2 |
C4—C3—H3 | 120.2 | C8—C9—H9 | 109.2 |
C2—C3—H3 | 120.2 | C10—C9—H9 | 109.2 |
C3—C4—C5 | 120.3 (2) | O2—C10—C11 | 113.17 (16) |
C3—C4—H4 | 119.9 | O2—C10—C9 | 107.72 (13) |
C5—C4—H4 | 119.9 | C11—C10—C9 | 104.29 (15) |
C4—C5—C6 | 121.04 (19) | O2—C10—H10 | 110.5 |
C4—C5—H5 | 119.5 | C11—C10—H10 | 110.5 |
C6—C5—H5 | 119.5 | C9—C10—H10 | 110.5 |
C5—C6—C1 | 117.69 (19) | N1—C11—C10 | 104.06 (13) |
C5—C6—C7 | 123.90 (17) | N1—C11—H11A | 110.9 |
C1—C6—C7 | 118.38 (16) | C10—C11—H11A | 110.9 |
N1—C7—C6 | 116.51 (14) | N1—C11—H11B | 110.9 |
N1—C7—H7A | 108.2 | C10—C11—H11B | 110.9 |
C6—C7—H7A | 108.2 | H11A—C11—H11B | 109.0 |
N1—C7—H7B | 108.2 | ||
C6—C1—C2—C3 | −0.7 (3) | C7—N1—C8—C9 | −169.66 (15) |
C1—C2—C3—C4 | 0.7 (4) | C11—N1—C8—C9 | −46.96 (17) |
C2—C3—C4—C5 | −0.6 (3) | N1—C8—C9—O1 | 155.98 (15) |
C3—C4—C5—C6 | 0.5 (3) | N1—C8—C9—C10 | 32.37 (18) |
C4—C5—C6—C1 | −0.4 (3) | O1—C9—C10—O2 | 112.90 (17) |
C4—C5—C6—C7 | 177.2 (2) | C8—C9—C10—O2 | −126.76 (16) |
C2—C1—C6—C5 | 0.5 (3) | O1—C9—C10—C11 | −126.60 (16) |
C2—C1—C6—C7 | −177.25 (19) | C8—C9—C10—C11 | −6.25 (19) |
C8—N1—C7—C6 | −166.25 (16) | C8—N1—C11—C10 | 42.96 (18) |
C11—N1—C7—C6 | 78.0 (2) | C7—N1—C11—C10 | 163.69 (15) |
C5—C6—C7—N1 | 11.1 (3) | O2—C10—C11—N1 | 94.90 (18) |
C1—C6—C7—N1 | −171.29 (17) | C9—C10—C11—N1 | −21.88 (18) |
Cg2 is the centroid of the C1–C6 ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···N1i | 0.82 | 2.13 | 2.918 (2) | 162 |
O2—H2···O1ii | 0.82 | 2.14 | 2.914 (2) | 157 |
C10—H10···Cg2iii | 0.98 | 2.86 | 3.771 (2) | 155 |
Symmetry codes: (i) −x+1, y−1/2, −z; (ii) x+1, y, z; (iii) x, y−1, z. |
Experimental details
Crystal data | |
Chemical formula | C11H15NO2 |
Mr | 193.24 |
Crystal system, space group | Monoclinic, P21 |
Temperature (K) | 293 |
a, b, c (Å) | 6.0244 (10), 8.1033 (14), 10.3981 (18) |
β (°) | 96.016 (2) |
V (Å3) | 504.81 (15) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.09 |
Crystal size (mm) | 0.31 × 0.27 × 0.14 |
Data collection | |
Diffractometer | Bruker APEXII CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.973, 0.987 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 1440, 1440, 1348 |
Rint | 0.000 |
(sin θ/λ)max (Å−1) | 0.597 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.032, 0.105, 1.03 |
No. of reflections | 1440 |
No. of parameters | 125 |
No. of restraints | 1 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.15, −0.11 |
Computer programs: APEX2 (Bruker, 2008), SAINT (Bruker), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008), Mercury (Macrae et al., 2006) and CAMERON (Watkin et al., 1996).
Cg2 is the centroid of the C1–C6 ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···N1i | 0.82 | 2.13 | 2.918 (2) | 162 |
O2—H2···O1ii | 0.82 | 2.14 | 2.914 (2) | 157 |
C10—H10···Cg2iii | 0.98 | 2.86 | 3.771 (2) | 155 |
Symmetry codes: (i) −x+1, y−1/2, −z; (ii) x+1, y, z; (iii) x, y−1, z. |
Acknowledgements
We thank the Natural Science Foundation of China (grant No. 20802092) for financial support.
References
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The title compound (+)-(3S,4S)-1-benzylpyrrolidine-3,4-diol was obtained from L-tartaric acid by condensation with benzylamine followed by reduction with NaBH4—BF3.Et2O. This is used for preparation of the chiral phosphine ligand DEGphos ((+)-(3R,4R)-N-benzyl-3,4- bis(diphenylphosphino)pyrrolidine, (Nagel et al., 1984), an efficient ligand for Rh-catalyzed asymmetric hydrogenations (Tang & Zhang, 2003).
In the title compound, C11H15NO2, the pyrrolidine ring adapts a twisted envelope formation. The two hydroxyl groups at C9 and C10 are arranged in a trans- conformation. The dihedral angle between the mean planes of the pyrrolidine phenyl rings is 62.4 (2)°. Crystal packing is stabilized by intermolecular O—H···N and O—H···O hydrogen bonds interactions. A weak C—H···Cg2 π ring intermolecular intereaction is also observed, where Cg2 = C1–C6.