organic compounds
3-tert-Butyl-1H-isochromene-1-thione
aOrganic and Medicinal Chemistry Research Laboratory, Organic Chemistry Division, School of Advanced Sciences, VIT University, Vellore 632 014, Tamil Nadu, India, bSolid State and Structural Chemistry Unit, Indian Institute of Science, Bangalore 560 012, Karnataka, India, and cDepartment of Physics, Faculty of Arts and Sciences, Erciyes University, 38039 Kayseri, Turkey
*Correspondence e-mail: akkurt@erciyes.edu.tr
The title compound, C13H14OS, crystallizes with two independent molecules in the The contains three voids of 197 Å3, but the residual electron density (highest peak = 0.24 e Å−3 and deepest hole = −0.18 e Å−3) in the difference Fourier map suggests no solvent molecule occupies this void. The is stabilized by π–π interactions between the isocoumarin ring systems, with centroid–centroid distances of 3.6793 (14) and 3.6566 (15) Å.
Related literature
For the et al. (2007a,b, 2009); Manivel et al. (2008); Basvanag et al. (2009); Henerson & Hill (1982).
and synthesis of isocoumarin and its thioanalogues, see: HathwarExperimental
Crystal data
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Data collection: SMART (Bruker, 2004); cell SAINT (Bruker, 2004); data reduction: SAINT; program(s) used to solve structure: SIR97 (Altomare et al., 1999); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999) and PLATON (Spek, 2009).
Supporting information
https://doi.org/10.1107/S1600536810019422/fj2306sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536810019422/fj2306Isup2.hkl
The 3-tert-butyl-1H-isochromen-1-one and Lawessons reagent were taken in toluene (1:1 ratio) and refluxed for 1 h. Then the reaction mass was quenched with water, extracted with dichloromethane, washed with water, dried, concentrated and purified by
to get the titled compound. Single crystals of the title compound were obtained via recrystalization from a chloroform solution.All H-atoms were placed in calculated positions (C—H = 0.93 and 0.96 Å) and were included in the
in the riding model approximation, with Uiso(H) set to 1.2 or 1.5Ueq(C). In the there is an 197 Å3 void, but the low electron density (0.24 e.Å-3) in the difference Fourier map suggests no solvent molecule occupying this void.Isocoumarins are isolated in a great variety of microorganisms, plants, and insects, and have been shown to have considerable biological activity.
and its derivatives are of a wide variety of microbial plant and insect sources and in synthesis of other medicinal compounds (Manivel et al., 2008, Basvanag et al., 2009). Sulfur containing have been known and a number of substituted thioisocoumarins, (Henerson et al., 1982) have been prepared. Most methods available for the construction of thioisocoumarin nucleus suffer from one or more drawbacks, such as the long reaction time required obtaining a good yield of the desired product or the use of expensive and hazardous reagents and solvents. Herewith, we are reporting the synthesis of 3-tert-butyl-1H-isochromene-1-thione using Lawessons reagent.The isocoumarin moieties in the symmetric unit of the title compound, (I), (Fig. 1a and Fig. 1 b), are essentially parallel to each other with a small dihedral angle of 1.20 (7) °.
In the molecular structure of (I), there exist C—H···S and C—H···O intramolecular interactions (Table 1, Fig. 2). In adition, π-π interactions are observed between the isocoumarin ring systems [Cg2···Cg4(x, y, z) = 3.6793 (14) Å and Cg2···Cg5(x, y, 1 + z) = 3.6566 (15) Å; where Cg2, Cg4 and Cg5 are the centroids of the C1–C6, O2'/C1'/C6'–C9' and C1'–C6' rings, respectively]. There is no classic hydrogen bonds in the structure.
For the
and synthesis of isocoumarin and its thioanalogues, see: Hathwar et al. (2007a,b, 2009); Manivel et al. (2008); Basvanag et al. (2009); Henerson & Hill (1982).Data collection: SMART (Bruker, 2004); cell
SAINT (Bruker, 2004); data reduction: SAINT (Bruker, 2004); program(s) used to solve structure: SIR97 (Altomare et al., 1999); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999) and PLATON (Spek, 2009).C13H14OS | Dx = 1.166 Mg m−3 |
Mr = 218.31 | Mo Kα radiation, λ = 0.71073 Å |
Trigonal, R3 | Cell parameters from 856 reflections |
Hall symbol: -R 3 | θ = 1.9–24.7° |
a = 43.2799 (16) Å | µ = 0.23 mm−1 |
c = 6.9025 (5) Å | T = 293 K |
V = 11197.2 (10) Å3 | Block, yellow |
Z = 36 | 0.31 × 0.18 × 0.15 mm |
F(000) = 4176 |
Bruker SMART CCD area-detector diffractometer | 5943 independent reflections |
Radiation source: fine-focus sealed tube | 3409 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.047 |
ω scans | θmax = 28.0°, θmin = 1.6° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −57→57 |
Tmin = 0.932, Tmax = 0.966 | k = −56→56 |
33028 measured reflections | l = −9→9 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.074 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.161 | H-atom parameters constrained |
S = 1.09 | w = 1/[σ2(Fo2) + (0.0599P)2 + 4.5485P] where P = (Fo2 + 2Fc2)/3 |
5943 reflections | (Δ/σ)max = 0.001 |
271 parameters | Δρmax = 0.24 e Å−3 |
0 restraints | Δρmin = −0.18 e Å−3 |
C13H14OS | Z = 36 |
Mr = 218.31 | Mo Kα radiation |
Trigonal, R3 | µ = 0.23 mm−1 |
a = 43.2799 (16) Å | T = 293 K |
c = 6.9025 (5) Å | 0.31 × 0.18 × 0.15 mm |
V = 11197.2 (10) Å3 |
Bruker SMART CCD area-detector diffractometer | 5943 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 3409 reflections with I > 2σ(I) |
Tmin = 0.932, Tmax = 0.966 | Rint = 0.047 |
33028 measured reflections |
R[F2 > 2σ(F2)] = 0.074 | 0 restraints |
wR(F2) = 0.161 | H-atom parameters constrained |
S = 1.09 | Δρmax = 0.24 e Å−3 |
5943 reflections | Δρmin = −0.18 e Å−3 |
271 parameters |
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell esds are taken into account in the estimation of distances, angles and torsion angles |
Refinement. Refinement on F2 for ALL reflections except those flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > σ(F2) is used only for calculating -R-factor-obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S1 | 0.81419 (2) | −0.00817 (2) | 0.78291 (13) | 0.0811 (3) | |
O1 | 0.87826 (4) | 0.04385 (4) | 0.7757 (3) | 0.0606 (7) | |
C1 | 0.86386 (7) | 0.09888 (6) | 0.7809 (3) | 0.0502 (8) | |
C2 | 0.85585 (8) | 0.12659 (7) | 0.7850 (4) | 0.0631 (10) | |
C3 | 0.82145 (9) | 0.11923 (8) | 0.7911 (4) | 0.0729 (11) | |
C4 | 0.79363 (8) | 0.08436 (9) | 0.7932 (4) | 0.0720 (11) | |
C5 | 0.80057 (7) | 0.05677 (7) | 0.7903 (4) | 0.0635 (10) | |
C6 | 0.83556 (6) | 0.06358 (6) | 0.7841 (3) | 0.0492 (8) | |
C7 | 0.84331 (7) | 0.03469 (6) | 0.7812 (4) | 0.0548 (9) | |
C8 | 0.90635 (6) | 0.07871 (6) | 0.7703 (3) | 0.0516 (8) | |
C9 | 0.89948 (7) | 0.10530 (6) | 0.7739 (3) | 0.0535 (8) | |
C10 | 0.94129 (7) | 0.07913 (7) | 0.7620 (4) | 0.0639 (10) | |
C11 | 0.97229 (7) | 0.11727 (8) | 0.7400 (5) | 0.0878 (13) | |
C12 | 0.94624 (9) | 0.06357 (9) | 0.9523 (5) | 0.0979 (16) | |
C13 | 0.94106 (9) | 0.05714 (9) | 0.5875 (5) | 0.1021 (16) | |
S1' | 0.77849 (2) | 0.11691 (2) | 0.28420 (12) | 0.0772 (3) | |
O2' | 0.76501 (4) | 0.05251 (4) | 0.2971 (3) | 0.0574 (6) | |
C1' | 0.83413 (6) | 0.06544 (6) | 0.2874 (3) | 0.0465 (8) | |
C2' | 0.86926 (6) | 0.07253 (7) | 0.2822 (4) | 0.0574 (9) | |
C3' | 0.89714 (7) | 0.10670 (8) | 0.2764 (4) | 0.0649 (10) | |
C4' | 0.89068 (7) | 0.13502 (7) | 0.2747 (4) | 0.0660 (10) | |
C5' | 0.85652 (7) | 0.12899 (6) | 0.2800 (3) | 0.0579 (9) | |
C6' | 0.82767 (6) | 0.09412 (6) | 0.2863 (3) | 0.0459 (8) | |
C7' | 0.79136 (6) | 0.08729 (6) | 0.2900 (3) | 0.0520 (8) | |
C8' | 0.77110 (6) | 0.02397 (6) | 0.2971 (4) | 0.0521 (8) | |
C9' | 0.80418 (6) | 0.02988 (6) | 0.2925 (3) | 0.0524 (9) | |
C10' | 0.73624 (7) | −0.01086 (6) | 0.3019 (5) | 0.0680 (10) | |
C11' | 0.74338 (8) | −0.04203 (7) | 0.2923 (5) | 0.0903 (13) | |
C12' | 0.71642 (9) | −0.01317 (8) | 0.4895 (6) | 0.1127 (16) | |
C13' | 0.71430 (8) | −0.01215 (8) | 0.1256 (6) | 0.1090 (16) | |
H2 | 0.87430 | 0.15020 | 0.78360 | 0.0760* | |
H3 | 0.81660 | 0.13790 | 0.79390 | 0.0880* | |
H4 | 0.77020 | 0.07960 | 0.79660 | 0.0870* | |
H5 | 0.78180 | 0.03330 | 0.79240 | 0.0760* | |
H9 | 0.91830 | 0.12870 | 0.77170 | 0.0640* | |
H11A | 0.96880 | 0.12780 | 0.62590 | 0.1320* | |
H11B | 0.99420 | 0.11690 | 0.72860 | 0.1320* | |
H11C | 0.97330 | 0.13100 | 0.85160 | 0.1320* | |
H12A | 0.94830 | 0.07890 | 1.05820 | 0.1460* | |
H12B | 0.96750 | 0.06190 | 0.94440 | 0.1460* | |
H12C | 0.92600 | 0.04030 | 0.97290 | 0.1460* | |
H13A | 0.92160 | 0.03310 | 0.59980 | 0.1540* | |
H13B | 0.96320 | 0.05700 | 0.58270 | 0.1540* | |
H13C | 0.93820 | 0.06750 | 0.47070 | 0.1540* | |
H2' | 0.87380 | 0.05370 | 0.28280 | 0.0690* | |
H3' | 0.92050 | 0.11100 | 0.27370 | 0.0780* | |
H4' | 0.90970 | 0.15830 | 0.26980 | 0.0790* | |
H5' | 0.85250 | 0.14820 | 0.27940 | 0.0700* | |
H9' | 0.80810 | 0.01060 | 0.29270 | 0.0630* | |
H11D | 0.75560 | −0.04070 | 0.17380 | 0.1360* | |
H11E | 0.72110 | −0.06410 | 0.29670 | 0.1360* | |
H11F | 0.75790 | −0.04080 | 0.40050 | 0.1360* | |
H12D | 0.72880 | −0.01600 | 0.59730 | 0.1690* | |
H12E | 0.69270 | −0.03330 | 0.48330 | 0.1690* | |
H12F | 0.71530 | 0.00830 | 0.50580 | 0.1690* | |
H13D | 0.71030 | 0.00780 | 0.12930 | 0.1630* | |
H13E | 0.69180 | −0.03400 | 0.12730 | 0.1630* | |
H13F | 0.72700 | −0.01110 | 0.00950 | 0.1630* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0696 (5) | 0.0415 (4) | 0.1141 (7) | 0.0142 (3) | −0.0067 (4) | −0.0026 (4) |
O1 | 0.0547 (11) | 0.0442 (10) | 0.0807 (13) | 0.0231 (8) | −0.0041 (9) | −0.0046 (8) |
C1 | 0.0629 (16) | 0.0480 (14) | 0.0398 (14) | 0.0278 (13) | 0.0024 (11) | −0.0030 (11) |
C2 | 0.082 (2) | 0.0539 (16) | 0.0593 (17) | 0.0383 (15) | 0.0031 (14) | −0.0037 (13) |
C3 | 0.100 (2) | 0.079 (2) | 0.0639 (19) | 0.063 (2) | 0.0030 (16) | −0.0045 (15) |
C4 | 0.0701 (19) | 0.097 (2) | 0.0658 (19) | 0.0544 (19) | 0.0005 (15) | −0.0057 (17) |
C5 | 0.0550 (16) | 0.0694 (18) | 0.0613 (17) | 0.0275 (14) | 0.0006 (13) | −0.0017 (14) |
C6 | 0.0540 (14) | 0.0494 (14) | 0.0420 (14) | 0.0243 (12) | −0.0004 (11) | −0.0034 (11) |
C7 | 0.0536 (15) | 0.0482 (14) | 0.0561 (16) | 0.0206 (12) | −0.0047 (12) | −0.0036 (12) |
C8 | 0.0493 (14) | 0.0467 (14) | 0.0497 (15) | 0.0171 (12) | −0.0020 (11) | −0.0034 (11) |
C9 | 0.0575 (15) | 0.0429 (13) | 0.0497 (15) | 0.0173 (12) | 0.0015 (12) | −0.0028 (11) |
C10 | 0.0535 (16) | 0.0663 (17) | 0.0679 (19) | 0.0270 (14) | −0.0014 (13) | −0.0039 (14) |
C11 | 0.0572 (18) | 0.082 (2) | 0.107 (3) | 0.0220 (16) | 0.0055 (17) | 0.0042 (18) |
C12 | 0.080 (2) | 0.115 (3) | 0.111 (3) | 0.058 (2) | 0.0003 (19) | 0.028 (2) |
C13 | 0.081 (2) | 0.117 (3) | 0.121 (3) | 0.059 (2) | −0.004 (2) | −0.037 (2) |
S1' | 0.0796 (5) | 0.0522 (4) | 0.1108 (7) | 0.0413 (4) | 0.0313 (4) | 0.0127 (4) |
O2' | 0.0444 (9) | 0.0391 (9) | 0.0862 (13) | 0.0191 (8) | 0.0055 (8) | −0.0002 (8) |
C1' | 0.0473 (13) | 0.0459 (13) | 0.0432 (14) | 0.0209 (11) | 0.0008 (11) | −0.0034 (10) |
C2' | 0.0506 (15) | 0.0635 (16) | 0.0586 (17) | 0.0288 (13) | −0.0024 (12) | −0.0038 (13) |
C3' | 0.0444 (15) | 0.077 (2) | 0.0610 (18) | 0.0212 (14) | −0.0013 (12) | −0.0015 (14) |
C4' | 0.0506 (16) | 0.0582 (17) | 0.0604 (18) | 0.0055 (13) | 0.0034 (13) | −0.0005 (13) |
C5' | 0.0616 (17) | 0.0445 (14) | 0.0561 (16) | 0.0178 (12) | 0.0086 (13) | −0.0021 (12) |
C6' | 0.0447 (13) | 0.0410 (12) | 0.0430 (14) | 0.0147 (11) | 0.0056 (10) | −0.0042 (10) |
C7' | 0.0559 (15) | 0.0414 (13) | 0.0536 (16) | 0.0205 (12) | 0.0112 (12) | −0.0004 (11) |
C8' | 0.0507 (14) | 0.0364 (12) | 0.0675 (17) | 0.0206 (11) | −0.0047 (12) | −0.0061 (11) |
C9' | 0.0539 (15) | 0.0396 (13) | 0.0665 (17) | 0.0255 (12) | −0.0043 (12) | −0.0069 (11) |
C10' | 0.0500 (15) | 0.0382 (14) | 0.105 (2) | 0.0140 (12) | −0.0103 (16) | −0.0065 (14) |
C11' | 0.0727 (19) | 0.0383 (15) | 0.147 (3) | 0.0181 (14) | −0.023 (2) | −0.0098 (17) |
C12' | 0.078 (2) | 0.061 (2) | 0.158 (4) | 0.0039 (17) | 0.041 (2) | 0.006 (2) |
C13' | 0.072 (2) | 0.063 (2) | 0.168 (4) | 0.0157 (17) | −0.047 (2) | −0.012 (2) |
S1—C7 | 1.641 (2) | C13—H13A | 0.9600 |
S1'—C7' | 1.634 (3) | C13—H13B | 0.9600 |
O1—C8 | 1.386 (3) | C13—H13C | 0.9600 |
O1—C7 | 1.359 (4) | C1'—C2' | 1.393 (4) |
O2'—C8' | 1.386 (3) | C1'—C6' | 1.402 (4) |
O2'—C7' | 1.361 (3) | C1'—C9' | 1.434 (3) |
C1—C6 | 1.401 (3) | C2'—C3' | 1.364 (4) |
C1—C2 | 1.405 (4) | C3'—C4' | 1.387 (4) |
C1—C9 | 1.424 (5) | C4'—C5' | 1.367 (5) |
C2—C3 | 1.359 (6) | C5'—C6' | 1.398 (3) |
C3—C4 | 1.382 (5) | C6'—C7' | 1.447 (4) |
C4—C5 | 1.369 (5) | C8'—C9' | 1.323 (4) |
C5—C6 | 1.391 (4) | C8'—C10' | 1.509 (4) |
C6—C7 | 1.448 (4) | C10'—C11' | 1.529 (4) |
C8—C9 | 1.325 (4) | C10'—C12' | 1.529 (5) |
C8—C10 | 1.504 (4) | C10'—C13' | 1.527 (5) |
C10—C11 | 1.528 (4) | C2'—H2' | 0.9300 |
C10—C12 | 1.539 (5) | C3'—H3' | 0.9300 |
C10—C13 | 1.532 (4) | C4'—H4' | 0.9300 |
C2—H2 | 0.9300 | C5'—H5' | 0.9300 |
C3—H3 | 0.9300 | C9'—H9' | 0.9300 |
C4—H4 | 0.9300 | C11'—H11D | 0.9600 |
C5—H5 | 0.9300 | C11'—H11E | 0.9600 |
C9—H9 | 0.9300 | C11'—H11F | 0.9600 |
C11—H11A | 0.9600 | C12'—H12D | 0.9600 |
C11—H11B | 0.9600 | C12'—H12E | 0.9600 |
C11—H11C | 0.9600 | C12'—H12F | 0.9600 |
C12—H12C | 0.9600 | C13'—H13D | 0.9600 |
C12—H12A | 0.9600 | C13'—H13E | 0.9600 |
C12—H12B | 0.9600 | C13'—H13F | 0.9600 |
S1'···C5'i | 3.681 (2) | H9···H11A | 2.4200 |
S1···H3'ii | 3.0200 | H9···H11C | 2.4000 |
S1···H11Ciii | 3.0800 | H9'···C11' | 2.5800 |
S1···H5 | 2.7800 | H9'···H2' | 2.5000 |
S1'···H11Eiv | 3.1800 | H9'···H11D | 2.3900 |
S1'···H5' | 2.7900 | H9'···H11F | 2.3200 |
S1'···H5'i | 3.0100 | H11A···H9 | 2.4200 |
S1'···H2v | 3.2000 | H11A···H13C | 2.5000 |
O1···H13A | 2.4700 | H11A···C9 | 2.8400 |
O1···H12C | 2.5400 | H11B···H12B | 2.5400 |
O2'···H12F | 2.5000 | H11B···H13B | 2.4600 |
O2'···H13D | 2.4700 | H11C···H9 | 2.4000 |
C1'···C6 | 3.431 (3) | H11C···C9 | 2.8600 |
C1'···C6vi | 3.476 (3) | H11C···H12A | 2.4200 |
C2···C5' | 3.487 (3) | H11C···S1ix | 3.0800 |
C2···C5'vii | 3.418 (3) | H11D···H13F | 2.4600 |
C3'···C9vi | 3.471 (3) | H11D···C9' | 2.8300 |
C3'···C9 | 3.437 (3) | H11D···H9' | 2.3900 |
C4···C7'vii | 3.435 (3) | H11E···H12E | 2.5700 |
C4···C7' | 3.479 (3) | H11E···H13E | 2.5100 |
C5'···S1'i | 3.681 (2) | H11E···S1'x | 3.1800 |
C5'···C2 | 3.487 (3) | H11F···C9' | 2.7900 |
C5'···C2vi | 3.418 (3) | H11F···H12D | 2.4400 |
C6···C1'vii | 3.476 (3) | H11F···H9' | 2.3200 |
C6···C1' | 3.431 (3) | H12A···H11C | 2.4200 |
C7'···C4vi | 3.435 (3) | H12B···H13B | 2.5000 |
C7'···C4 | 3.479 (3) | H12B···H11B | 2.5400 |
C9···C3' | 3.437 (3) | H12C···H13A | 2.5900 |
C9···C3'vii | 3.471 (3) | H12C···O1 | 2.5400 |
C9···H11A | 2.8400 | H12D···H11F | 2.4400 |
C9···H11C | 2.8600 | H12D···H5 | 2.5900 |
C9'···H11F | 2.7900 | H12E···H13E | 2.4600 |
C9'···H11D | 2.8300 | H12E···H11E | 2.5700 |
C11···H9 | 2.6300 | H12F···O2' | 2.5000 |
C11'···H9' | 2.5800 | H12F···H13Eiv | 2.5900 |
H2···H9 | 2.5000 | H13A···H12C | 2.5900 |
H2···S1'v | 3.2000 | H13A···O1 | 2.4700 |
H2'···H9' | 2.5000 | H13B···H12B | 2.5000 |
H3'···S1viii | 3.0200 | H13B···H11B | 2.4600 |
H5···H12D | 2.5900 | H13C···H11A | 2.5000 |
H5···S1 | 2.7800 | H13D···O2' | 2.4700 |
H5'···S1' | 2.7900 | H13E···H11E | 2.5100 |
H5'···S1'i | 3.0100 | H13E···H12E | 2.4600 |
H9···C11 | 2.6300 | H13E···H12Fx | 2.5900 |
H9···H2 | 2.5000 | H13F···H11D | 2.4600 |
C7—O1—C8 | 124.1 (2) | H13A—C13—H13B | 109.00 |
C7'—O2'—C8' | 123.9 (2) | C2'—C1'—C6' | 118.9 (2) |
C2—C1—C6 | 118.4 (3) | C2'—C1'—C9' | 122.6 (2) |
C2—C1—C9 | 122.6 (2) | C6'—C1'—C9' | 118.5 (3) |
C6—C1—C9 | 119.0 (2) | C1'—C2'—C3' | 121.1 (3) |
C1—C2—C3 | 120.6 (3) | C2'—C3'—C4' | 119.9 (3) |
C2—C3—C4 | 120.7 (3) | C3'—C4'—C5' | 120.5 (3) |
C3—C4—C5 | 120.1 (4) | C4'—C5'—C6' | 120.3 (3) |
C4—C5—C6 | 120.4 (3) | C1'—C6'—C5' | 119.3 (3) |
C1—C6—C7 | 119.2 (3) | C1'—C6'—C7' | 119.7 (2) |
C5—C6—C7 | 121.0 (2) | C5'—C6'—C7' | 120.9 (2) |
C1—C6—C5 | 119.8 (2) | S1'—C7'—O2' | 116.3 (2) |
S1—C7—C6 | 126.7 (2) | S1'—C7'—C6' | 126.93 (18) |
O1—C7—C6 | 117.0 (2) | O2'—C7'—C6' | 116.8 (2) |
S1—C7—O1 | 116.3 (2) | O2'—C8'—C9' | 119.8 (2) |
O1—C8—C10 | 110.1 (2) | O2'—C8'—C10' | 110.5 (2) |
C9—C8—C10 | 130.6 (2) | C9'—C8'—C10' | 129.7 (2) |
O1—C8—C9 | 119.3 (3) | C1'—C9'—C8' | 121.2 (2) |
C1—C9—C8 | 121.5 (2) | C8'—C10'—C11' | 109.8 (3) |
C8—C10—C12 | 108.7 (3) | C8'—C10'—C12' | 109.4 (2) |
C8—C10—C13 | 109.2 (3) | C8'—C10'—C13' | 108.2 (2) |
C8—C10—C11 | 110.6 (2) | C11'—C10'—C12' | 109.5 (3) |
C11—C10—C13 | 108.8 (3) | C11'—C10'—C13' | 109.2 (3) |
C12—C10—C13 | 111.0 (3) | C12'—C10'—C13' | 110.8 (3) |
C11—C10—C12 | 108.6 (3) | C1'—C2'—H2' | 120.00 |
C3—C2—H2 | 120.00 | C3'—C2'—H2' | 119.00 |
C1—C2—H2 | 120.00 | C2'—C3'—H3' | 120.00 |
C2—C3—H3 | 120.00 | C4'—C3'—H3' | 120.00 |
C4—C3—H3 | 120.00 | C3'—C4'—H4' | 120.00 |
C3—C4—H4 | 120.00 | C5'—C4'—H4' | 120.00 |
C5—C4—H4 | 120.00 | C4'—C5'—H5' | 120.00 |
C6—C5—H5 | 120.00 | C6'—C5'—H5' | 120.00 |
C4—C5—H5 | 120.00 | C1'—C9'—H9' | 119.00 |
C1—C9—H9 | 119.00 | C8'—C9'—H9' | 119.00 |
C8—C9—H9 | 119.00 | C10'—C11'—H11D | 109.00 |
C10—C11—H11B | 109.00 | C10'—C11'—H11E | 109.00 |
C10—C11—H11C | 109.00 | C10'—C11'—H11F | 109.00 |
C10—C11—H11A | 109.00 | H11D—C11'—H11E | 110.00 |
H11A—C11—H11C | 110.00 | H11D—C11'—H11F | 109.00 |
H11B—C11—H11C | 110.00 | H11E—C11'—H11F | 110.00 |
H11A—C11—H11B | 109.00 | C10'—C12'—H12D | 110.00 |
C10—C12—H12A | 109.00 | C10'—C12'—H12E | 109.00 |
C10—C12—H12B | 109.00 | C10'—C12'—H12F | 110.00 |
H12A—C12—H12B | 109.00 | H12D—C12'—H12E | 109.00 |
H12A—C12—H12C | 109.00 | H12D—C12'—H12F | 110.00 |
C10—C12—H12C | 109.00 | H12E—C12'—H12F | 110.00 |
H12B—C12—H12C | 110.00 | C10'—C13'—H13D | 109.00 |
C10—C13—H13B | 110.00 | C10'—C13'—H13E | 109.00 |
C10—C13—H13C | 109.00 | C10'—C13'—H13F | 109.00 |
C10—C13—H13A | 109.00 | H13D—C13'—H13E | 110.00 |
H13A—C13—H13C | 109.00 | H13D—C13'—H13F | 110.00 |
H13B—C13—H13C | 110.00 | H13E—C13'—H13F | 109.00 |
C8—O1—C7—S1 | 178.89 (18) | C10—C8—C9—C1 | 179.7 (2) |
C8—O1—C7—C6 | −0.9 (4) | O1—C8—C10—C11 | 175.6 (2) |
C7—O1—C8—C9 | 1.2 (3) | O1—C8—C10—C12 | −65.3 (3) |
C7—O1—C8—C10 | −179.1 (2) | O1—C8—C10—C13 | 55.9 (3) |
C8'—O2'—C7'—S1' | 178.1 (2) | C6'—C1'—C2'—C3' | 0.1 (4) |
C8'—O2'—C7'—C6' | −1.3 (3) | C9'—C1'—C2'—C3' | 179.7 (2) |
C7'—O2'—C8'—C9' | 0.9 (4) | C2'—C1'—C6'—C5' | 0.0 (3) |
C7'—O2'—C8'—C10' | −178.9 (2) | C2'—C1'—C6'—C7' | 179.5 (2) |
C9—C1—C2—C3 | 179.8 (2) | C9'—C1'—C6'—C5' | −179.56 (19) |
C2—C1—C6—C5 | 0.3 (3) | C9'—C1'—C6'—C7' | −0.1 (3) |
C6—C1—C2—C3 | −0.3 (4) | C2'—C1'—C9'—C8' | −179.9 (2) |
C6—C1—C9—C8 | 0.0 (3) | C6'—C1'—C9'—C8' | −0.4 (3) |
C9—C1—C6—C5 | −179.8 (2) | C1'—C2'—C3'—C4' | −0.3 (4) |
C9—C1—C6—C7 | 0.3 (3) | C2'—C3'—C4'—C5' | 0.4 (4) |
C2—C1—C6—C7 | −179.6 (2) | C3'—C4'—C5'—C6' | −0.3 (4) |
C2—C1—C9—C8 | 180.0 (2) | C4'—C5'—C6'—C1' | 0.1 (3) |
C1—C2—C3—C4 | −0.1 (4) | C4'—C5'—C6'—C7' | −179.4 (2) |
C2—C3—C4—C5 | 0.4 (4) | C1'—C6'—C7'—S1' | −178.42 (17) |
C3—C4—C5—C6 | −0.4 (4) | C1'—C6'—C7'—O2' | 0.9 (3) |
C4—C5—C6—C7 | 179.9 (2) | C5'—C6'—C7'—S1' | 1.1 (3) |
C4—C5—C6—C1 | 0.0 (4) | C5'—C6'—C7'—O2' | −179.7 (2) |
C1—C6—C7—O1 | 0.1 (3) | O2'—C8'—C9'—C1' | 0.0 (4) |
C5—C6—C7—S1 | 0.5 (4) | C10'—C8'—C9'—C1' | 179.7 (3) |
C5—C6—C7—O1 | −179.8 (2) | O2'—C8'—C10'—C11' | 177.4 (2) |
C1—C6—C7—S1 | −179.63 (19) | O2'—C8'—C10'—C12' | −62.5 (3) |
O1—C8—C9—C1 | −0.8 (3) | O2'—C8'—C10'—C13' | 58.3 (3) |
C9—C8—C10—C11 | −4.8 (4) | C9'—C8'—C10'—C11' | −2.4 (4) |
C9—C8—C10—C12 | 114.3 (3) | C9'—C8'—C10'—C12' | 117.8 (3) |
C9—C8—C10—C13 | −124.5 (3) | C9'—C8'—C10'—C13' | −121.5 (3) |
Symmetry codes: (i) −x+5/3, −y+1/3, −z+1/3; (ii) x−y, x−1, −z+1; (iii) x−y, x−1, −z+2; (iv) −y+2/3, x−y−2/3, z+1/3; (v) −x+5/3, −y+1/3, −z+4/3; (vi) x, y, z−1; (vii) x, y, z+1; (viii) y+1, −x+y+1, −z+1; (ix) y+1, −x+y+1, −z+2; (x) −x+y+4/3, −x+2/3, z−1/3. |
D—H···A | D—H | H···A | D···A | D—H···A |
C5—H5···S1 | 0.93 | 2.78 | 3.148 (3) | 105 |
C5′—H5′···S1′ | 0.93 | 2.79 | 3.149 (3) | 104 |
C12—H12C···O1 | 0.96 | 2.54 | 2.891 (5) | 102 |
C12′—H12F···O2′ | 0.96 | 2.50 | 2.879 (4) | 103 |
C13—H13A···O1 | 0.96 | 2.47 | 2.800 (5) | 100 |
C13′—H13D···O2′ | 0.96 | 2.47 | 2.812 (4) | 101 |
Experimental details
Crystal data | |
Chemical formula | C13H14OS |
Mr | 218.31 |
Crystal system, space group | Trigonal, R3 |
Temperature (K) | 293 |
a, c (Å) | 43.2799 (16), 6.9025 (5) |
V (Å3) | 11197.2 (10) |
Z | 36 |
Radiation type | Mo Kα |
µ (mm−1) | 0.23 |
Crystal size (mm) | 0.31 × 0.18 × 0.15 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.932, 0.966 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 33028, 5943, 3409 |
Rint | 0.047 |
(sin θ/λ)max (Å−1) | 0.661 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.074, 0.161, 1.09 |
No. of reflections | 5943 |
No. of parameters | 271 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.24, −0.18 |
Computer programs: SMART (Bruker, 2004), SAINT (Bruker, 2004), SIR97 (Altomare et al., 1999), SHELXL97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 1997), WinGX (Farrugia, 1999) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
C5—H5···S1 | 0.93 | 2.78 | 3.148 (3) | 105 |
C5'—H5'···S1' | 0.93 | 2.79 | 3.149 (3) | 104 |
C12—H12C···O1 | 0.96 | 2.54 | 2.891 (5) | 102 |
C12'—H12F···O2' | 0.96 | 2.50 | 2.879 (4) | 103 |
C13—H13A···O1 | 0.96 | 2.47 | 2.800 (5) | 100 |
C13'—H13D···O2' | 0.96 | 2.47 | 2.812 (4) | 101 |
Acknowledgements
We thank the Department of Science and Technology, India, for use of the CCD facility set up under the IRHPA–DST program at IISc. We thank Professor T. N. Guru Row, IISc, Bangalore, for the data collection. FNK thanks the DST for Fast Track Proposal funding.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Isocoumarins are isolated in a great variety of microorganisms, plants, and insects, and have been shown to have considerable biological activity. Isocoumarins and its derivatives are secondary metabolites of a wide variety of microbial plant and insect sources and in synthesis of other medicinal compounds (Manivel et al., 2008, Basvanag et al., 2009). Sulfur containing isocoumarins have been known and a number of substituted thioisocoumarins, (Henerson et al., 1982) have been prepared. Most methods available for the construction of thioisocoumarin nucleus suffer from one or more drawbacks, such as the long reaction time required obtaining a good yield of the desired product or the use of expensive and hazardous reagents and solvents. Herewith, we are reporting the synthesis of 3-tert-butyl-1H-isochromene-1-thione using Lawessons reagent.
The isocoumarin moieties in the symmetric unit of the title compound, (I), (Fig. 1a and Fig. 1 b), are essentially parallel to each other with a small dihedral angle of 1.20 (7) °.
In the molecular structure of (I), there exist C—H···S and C—H···O intramolecular interactions (Table 1, Fig. 2). In adition, π-π interactions are observed between the isocoumarin ring systems [Cg2···Cg4(x, y, z) = 3.6793 (14) Å and Cg2···Cg5(x, y, 1 + z) = 3.6566 (15) Å; where Cg2, Cg4 and Cg5 are the centroids of the C1–C6, O2'/C1'/C6'–C9' and C1'–C6' rings, respectively]. There is no classic hydrogen bonds in the structure.