organic compounds
N-(6-{2-[6-(2,2-Dimethylpropanamido)-2-pyridyl]ethyl}-2-pyridyl)-2,2-dimethylpropanamide
aX-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia, and bDepartment of Chemistry, Bengal Engineering and Science University, Shibpur, Howrah 711 103, West Bengal, India
*Correspondence e-mail: hkfun@usm.my
The title compound, C22H30N4O2, lies about a crystallographic inversion center. The whole molecule is disordered over two positions with a refined occupancy ratio of 0.636 (10):0.364 (10). The pyridine rings are approximately planar, with maximum deviations of 0.033 (10) and 0.063 (17) Å for the major and minor components, respectively. The mean planes of the pyridine rings form dihedral angles of 17 (2)° in the major component and 18 (2)° in the minor component with the respective formamide groups attached to them. In the crystal packing, intermolecular N—H⋯O and C—H⋯O hydrogen bonds link the molecules into two-dimensional networks parallel to the ab plane.
Related literature
For the importance of dicarboxylic acids and their derivatives, see: Garcia-Tellado et al. (1990); Geib et al. (1993); Karle et al. (1997); Goswami, Dey, Fun et al. (2005); Goswami et al. (2006, 2008). For a related structure, see: Goswami, Dey, Chantrapromma et al. (2005). For the preparation, see: Yamada & Momose (1981); Goswami et al. (1989).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2009); cell SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).
Supporting information
https://doi.org/10.1107/S1600536810023068/sj5021sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536810023068/sj5021Isup2.hkl
The title compound is synthesized by a known reaction procedure (Yamada & Momose, 1981; Goswami et al., 1989) as follows. In a round-bottomed flask, N-(6-bromomethyl-pyridine-2-yl)-2,2-dimethyl propionamide (500 mg, 1.84 mmol) and Co(PPh3)3Cl (1.76 g, 2 mmol) was kept under nitrogen atmosphere. Dry, degassed benzene (50 ml) was added dropwise to the flask maintaining at 0–15 °C temperature around the flask. The reaction was continued for half an hour. The deep green colour turns blue, an indication of the completion of the reaction. Then benzene was evaporated and the product extracted with CHCl3. The solvent was then evaporated and purified by silica gel (100–200 mesh)
using ethyl acetate and petroleum ether (1:4) as Single crystals were grown by slow evaporation of a chloroform-methanol (8:2) solution of 1,2-bis(2-pivaloylamino-6-pyridyl)ethane (m.p. = 489–491 K, 194 mg, yield = 55%).All the H atoms were positioned geometrically [C–H = 0.93 to 0.97 Å; N–H = 0.86 Å] and were refined using a riding model, with Uiso(H) = 1.2 Ueq(C, N) or 1.5 Ueq(C). Rigid bond restraint (SAME) was applied to the pyridine ring. The whole molecule is disordered over two positions with a refined ratio of 0.636 (10): 0.364 (10). In the final difference Fourier map, the highest peak and the deepest hole are 0.66 and 0.37 Å from H11D and H11A, respectively.
The recognition of biologically important substrates like dicarboxylic acids by bis-pyridine amide is one of the most important areas of research in supramolecular chemistry as well as in the design of materials through new crystal engineering (Garcia-Tellado et al., 1990; Geib et al., 1993; Karle et al., 1997; Goswami, Dey, Fun et al., 2005; Goswami et al., 2006, 2008). The title compound can be used as receptor for dicarboxylic acids with the ethylene group acting as a spacer.
The title compound, (Fig. 1), lies about a crystallographic inversion center (symmetry code = -x, -y + 1, -z + 1). The molecule has a whole-molecule disorder over two positions with a refined ratio of 0.636 (10): 0.364 (10). In the molecule, the pyridine rings (C1–C5/N1) are approximately planar with the maximum deviations of 0.033 (10) Å at N1A and 0.063 (17) Å at C1B for the major and minor components, respectively. The mean planes of these pyridine rings form dihedral angles of 17 (2)° in the major component and 18 (2)° in the minor component with the respective formamide groups (N2/C6/O1) attached to them. This
is closely related to that of N-[6-(hydroxymethyl)pyridin-2-yl]-2,2-dimethylpropanamide (Goswami, Dey, Chantrapromma et al., 2005).In the crystal packing (Fig. 2 & Fig. 3), intermolecular N—H···O and C—H···O hydrogen bonds (Table 1) link the molecules into a two-dimensional network parallel to the ab plane.
For the importance of dicarboxylic acids and their derivatives, see: Garcia-Tellado et al. (1990); Geib et al. (1993); Karle et al. (1997); Goswami, Dey, Fun et al. (2005); Goswami et al. (2006, 2008). For a related structure, see: Goswami, Dey, Chantrapromma et al. (2005). For the preparation, see: Yamada & Momose (1981); Goswami et al. (1989).
Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).C22H30N4O2 | F(000) = 824 |
Mr = 382.50 | Dx = 1.163 Mg m−3 |
Orthorhombic, Pbca | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ac 2ab | Cell parameters from 2706 reflections |
a = 11.7933 (3) Å | θ = 2.9–20.5° |
b = 10.3648 (2) Å | µ = 0.08 mm−1 |
c = 17.8667 (4) Å | T = 296 K |
V = 2183.94 (9) Å3 | Block, colourless |
Z = 4 | 0.36 × 0.15 × 0.10 mm |
Bruker SMART APEXII CCD area-detector diffractometer | 3221 independent reflections |
Radiation source: fine-focus sealed tube | 1678 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.076 |
φ and ω scans | θmax = 30.1°, θmin = 2.3° |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | h = −13→16 |
Tmin = 0.973, Tmax = 0.992 | k = −14→14 |
36712 measured reflections | l = −25→25 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.062 | H-atom parameters constrained |
wR(F2) = 0.161 | w = 1/[σ2(Fo2) + (0.0587P)2 + 0.3829P] where P = (Fo2 + 2Fc2)/3 |
S = 1.03 | (Δ/σ)max < 0.001 |
3221 reflections | Δρmax = 0.17 e Å−3 |
256 parameters | Δρmin = −0.16 e Å−3 |
12 restraints | Extinction correction: SHELXTL (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0034 (10) |
C22H30N4O2 | V = 2183.94 (9) Å3 |
Mr = 382.50 | Z = 4 |
Orthorhombic, Pbca | Mo Kα radiation |
a = 11.7933 (3) Å | µ = 0.08 mm−1 |
b = 10.3648 (2) Å | T = 296 K |
c = 17.8667 (4) Å | 0.36 × 0.15 × 0.10 mm |
Bruker SMART APEXII CCD area-detector diffractometer | 3221 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | 1678 reflections with I > 2σ(I) |
Tmin = 0.973, Tmax = 0.992 | Rint = 0.076 |
36712 measured reflections |
R[F2 > 2σ(F2)] = 0.062 | 12 restraints |
wR(F2) = 0.161 | H-atom parameters constrained |
S = 1.03 | Δρmax = 0.17 e Å−3 |
3221 reflections | Δρmin = −0.16 e Å−3 |
256 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
O1A | 0.2767 (12) | 0.0598 (8) | 0.3040 (6) | 0.079 (3) | 0.636 (10) |
N2A | 0.2446 (11) | 0.2679 (14) | 0.3392 (8) | 0.0476 (18) | 0.636 (10) |
H2AB | 0.2485 | 0.3473 | 0.3255 | 0.057* | 0.636 (10) |
N1A | 0.1312 (9) | 0.3395 (8) | 0.4318 (5) | 0.067 (3) | 0.636 (10) |
C1A | 0.0598 (10) | 0.3242 (10) | 0.4903 (5) | 0.073 (3) | 0.636 (10) |
C2A | 0.0520 (10) | 0.2138 (8) | 0.5303 (5) | 0.073 (4) | 0.636 (10) |
H2AA | 0.0077 | 0.2109 | 0.5734 | 0.087* | 0.636 (10) |
C3A | 0.1097 (10) | 0.1060 (9) | 0.5071 (4) | 0.0587 (19) | 0.636 (10) |
H3AA | 0.1019 | 0.0277 | 0.5320 | 0.070* | 0.636 (10) |
C4A | 0.1794 (11) | 0.1177 (8) | 0.4459 (6) | 0.055 (3) | 0.636 (10) |
H4AA | 0.2226 | 0.0480 | 0.4297 | 0.066* | 0.636 (10) |
C5A | 0.1845 (7) | 0.2338 (8) | 0.4088 (4) | 0.041 (2) | 0.636 (10) |
C6A | 0.2935 (10) | 0.1758 (9) | 0.2969 (5) | 0.049 (3) | 0.636 (10) |
C7A | 0.3538 (9) | 0.2266 (9) | 0.2207 (8) | 0.052 (3) | 0.636 (10) |
C8A | 0.2636 (6) | 0.2620 (9) | 0.1715 (3) | 0.127 (4) | 0.636 (10) |
H8AA | 0.2196 | 0.1869 | 0.1594 | 0.191* | 0.636 (10) |
H8AB | 0.2945 | 0.2982 | 0.1264 | 0.191* | 0.636 (10) |
H8AC | 0.2160 | 0.3247 | 0.1955 | 0.191* | 0.636 (10) |
C9A | 0.4357 (6) | 0.1286 (6) | 0.1954 (5) | 0.113 (3) | 0.636 (10) |
H9AA | 0.3960 | 0.0511 | 0.1820 | 0.169* | 0.636 (10) |
H9AB | 0.4881 | 0.1101 | 0.2351 | 0.169* | 0.636 (10) |
H9AC | 0.4764 | 0.1605 | 0.1528 | 0.169* | 0.636 (10) |
C10A | 0.4251 (6) | 0.3487 (4) | 0.2434 (4) | 0.0838 (18) | 0.636 (10) |
H10A | 0.4634 | 0.3820 | 0.2001 | 0.126* | 0.636 (10) |
H10B | 0.4800 | 0.3251 | 0.2806 | 0.126* | 0.636 (10) |
H10C | 0.3754 | 0.4136 | 0.2632 | 0.126* | 0.636 (10) |
C11A | −0.0048 (12) | 0.4445 (9) | 0.5168 (6) | 0.146 (4) | 0.636 (10) |
H11A | −0.0847 | 0.4225 | 0.5164 | 0.175* | 0.636 (10) |
H11B | 0.0159 | 0.4583 | 0.5687 | 0.175* | 0.636 (10) |
O1B | 0.304 (2) | 0.0619 (16) | 0.3078 (10) | 0.089 (5) | 0.364 (10) |
N2B | 0.257 (2) | 0.254 (2) | 0.3499 (15) | 0.050 (4) | 0.364 (10) |
H2BB | 0.2879 | 0.3288 | 0.3476 | 0.060* | 0.364 (10) |
N1B | 0.1365 (16) | 0.3484 (15) | 0.4367 (9) | 0.066 (5) | 0.364 (10) |
C1B | 0.0801 (16) | 0.3399 (14) | 0.5017 (7) | 0.049 (3) | 0.364 (10) |
C2B | 0.0611 (19) | 0.2206 (16) | 0.5319 (7) | 0.086 (8) | 0.364 (10) |
H2BA | 0.0090 | 0.2085 | 0.5704 | 0.103* | 0.364 (10) |
C3B | 0.122 (2) | 0.1198 (19) | 0.5029 (11) | 0.094 (7) | 0.364 (10) |
H3BA | 0.1199 | 0.0415 | 0.5283 | 0.113* | 0.364 (10) |
C4B | 0.1855 (19) | 0.1273 (16) | 0.4388 (12) | 0.066 (6) | 0.364 (10) |
H4BA | 0.2232 | 0.0567 | 0.4184 | 0.079* | 0.364 (10) |
C5B | 0.1887 (18) | 0.2479 (16) | 0.4074 (11) | 0.064 (5) | 0.364 (10) |
C6B | 0.2962 (18) | 0.1758 (18) | 0.2901 (10) | 0.062 (6) | 0.364 (10) |
C7B | 0.3565 (14) | 0.2338 (18) | 0.2344 (14) | 0.053 (4) | 0.364 (10) |
C8B | 0.4674 (12) | 0.272 (3) | 0.2505 (7) | 0.187 (10) | 0.364 (10) |
H8BA | 0.4664 | 0.3372 | 0.2884 | 0.281* | 0.364 (10) |
H8BB | 0.5022 | 0.3051 | 0.2060 | 0.281* | 0.364 (10) |
H8BC | 0.5097 | 0.1986 | 0.2681 | 0.281* | 0.364 (10) |
C9B | 0.2959 (17) | 0.340 (2) | 0.1898 (11) | 0.210 (12) | 0.364 (10) |
H9BA | 0.2871 | 0.4152 | 0.2207 | 0.314* | 0.364 (10) |
H9BB | 0.2227 | 0.3098 | 0.1743 | 0.314* | 0.364 (10) |
H9BC | 0.3402 | 0.3617 | 0.1465 | 0.314* | 0.364 (10) |
C10B | 0.3652 (19) | 0.1244 (13) | 0.1673 (7) | 0.145 (7) | 0.364 (10) |
H10D | 0.4015 | 0.1616 | 0.1243 | 0.218* | 0.364 (10) |
H10E | 0.2904 | 0.0961 | 0.1540 | 0.218* | 0.364 (10) |
H10F | 0.4088 | 0.0522 | 0.1847 | 0.218* | 0.364 (10) |
C11B | 0.0373 (8) | 0.4652 (12) | 0.5286 (4) | 0.060 (3) | 0.364 (10) |
H11C | 0.1012 | 0.5200 | 0.5412 | 0.072* | 0.364 (10) |
H11D | −0.0062 | 0.4514 | 0.5740 | 0.072* | 0.364 (10) |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1A | 0.128 (6) | 0.036 (3) | 0.072 (3) | −0.004 (3) | 0.017 (3) | −0.009 (2) |
N2A | 0.055 (3) | 0.041 (4) | 0.047 (3) | 0.007 (2) | 0.015 (3) | 0.003 (3) |
N1A | 0.081 (5) | 0.049 (4) | 0.070 (5) | −0.001 (3) | 0.044 (4) | −0.002 (3) |
C1A | 0.076 (5) | 0.076 (4) | 0.065 (5) | 0.005 (3) | 0.020 (4) | −0.016 (3) |
C2A | 0.077 (5) | 0.071 (6) | 0.070 (6) | −0.011 (4) | 0.025 (4) | −0.001 (4) |
C3A | 0.073 (4) | 0.060 (3) | 0.042 (3) | −0.007 (3) | 0.001 (3) | 0.008 (2) |
C4A | 0.074 (5) | 0.043 (4) | 0.048 (4) | −0.007 (3) | −0.006 (3) | 0.016 (3) |
C5A | 0.042 (3) | 0.040 (4) | 0.041 (3) | 0.008 (3) | 0.004 (3) | −0.006 (3) |
C6A | 0.060 (5) | 0.043 (5) | 0.044 (3) | −0.003 (3) | 0.001 (3) | 0.014 (3) |
C7A | 0.069 (4) | 0.046 (3) | 0.043 (5) | −0.007 (2) | 0.013 (3) | −0.004 (3) |
C8A | 0.085 (3) | 0.235 (10) | 0.062 (2) | −0.026 (5) | −0.013 (3) | 0.065 (4) |
C9A | 0.106 (4) | 0.073 (3) | 0.159 (6) | 0.004 (3) | 0.073 (4) | −0.025 (3) |
C10A | 0.094 (4) | 0.071 (3) | 0.086 (3) | −0.021 (2) | 0.025 (3) | 0.000 (2) |
C11A | 0.181 (9) | 0.091 (4) | 0.165 (8) | 0.045 (7) | 0.105 (6) | 0.014 (6) |
O1B | 0.129 (11) | 0.062 (7) | 0.074 (6) | 0.041 (6) | 0.040 (6) | 0.027 (5) |
N2B | 0.069 (7) | 0.025 (3) | 0.056 (7) | 0.001 (4) | −0.002 (4) | 0.010 (4) |
N1B | 0.085 (9) | 0.054 (7) | 0.060 (7) | 0.018 (5) | −0.008 (6) | −0.015 (5) |
C1B | 0.061 (5) | 0.059 (5) | 0.027 (3) | −0.004 (4) | −0.006 (3) | −0.005 (3) |
C2B | 0.098 (13) | 0.129 (18) | 0.030 (6) | 0.019 (10) | 0.008 (6) | 0.015 (7) |
C3B | 0.118 (14) | 0.079 (9) | 0.086 (10) | −0.020 (8) | 0.007 (8) | 0.038 (7) |
C4B | 0.062 (8) | 0.084 (13) | 0.051 (7) | 0.021 (8) | 0.014 (5) | −0.013 (8) |
C5B | 0.071 (9) | 0.055 (7) | 0.068 (9) | −0.035 (6) | −0.004 (7) | 0.013 (6) |
C6B | 0.059 (9) | 0.059 (10) | 0.068 (8) | 0.028 (7) | 0.002 (6) | −0.039 (6) |
C7B | 0.044 (5) | 0.083 (8) | 0.032 (6) | 0.021 (5) | 0.003 (3) | −0.019 (4) |
C8B | 0.096 (10) | 0.37 (3) | 0.095 (7) | −0.108 (14) | 0.009 (7) | −0.006 (14) |
C9B | 0.203 (19) | 0.23 (2) | 0.196 (17) | 0.135 (15) | 0.127 (15) | 0.154 (15) |
C10B | 0.218 (17) | 0.124 (8) | 0.094 (7) | −0.057 (11) | 0.095 (10) | −0.047 (6) |
C11B | 0.063 (4) | 0.098 (9) | 0.019 (2) | 0.020 (4) | 0.000 (3) | −0.010 (3) |
O1A—C6A | 1.225 (11) | O1B—C6B | 1.23 (2) |
N2A—C6A | 1.348 (17) | N2B—C5B | 1.31 (3) |
N2A—C5A | 1.473 (14) | N2B—C6B | 1.42 (3) |
N2A—H2AB | 0.8600 | N2B—H2BB | 0.8600 |
N1A—C5A | 1.328 (7) | N1B—C5B | 1.318 (13) |
N1A—C1A | 1.352 (7) | N1B—C1B | 1.341 (12) |
C1A—C2A | 1.353 (8) | C1B—C2B | 1.368 (13) |
C1A—C11A | 1.536 (13) | C1B—C11B | 1.47 (2) |
C2A—C3A | 1.372 (7) | C2B—C3B | 1.368 (13) |
C2A—H2AA | 0.9300 | C2B—H2BA | 0.9300 |
C3A—C4A | 1.374 (8) | C3B—C4B | 1.372 (13) |
C3A—H3AA | 0.9300 | C3B—H3BA | 0.9300 |
C4A—C5A | 1.375 (7) | C4B—C5B | 1.372 (13) |
C4A—H4AA | 0.9300 | C4B—H4BA | 0.9300 |
C6A—C7A | 1.624 (14) | C6B—C7B | 1.36 (3) |
C7A—C8A | 1.429 (14) | C7B—C8B | 1.39 (2) |
C7A—C9A | 1.473 (12) | C7B—C9B | 1.54 (2) |
C7A—C10A | 1.572 (12) | C7B—C10B | 1.65 (2) |
C8A—H8AA | 0.9600 | C8B—H8BA | 0.9600 |
C8A—H8AB | 0.9600 | C8B—H8BB | 0.9600 |
C8A—H8AC | 0.9600 | C8B—H8BC | 0.9600 |
C9A—H9AA | 0.9600 | C9B—H9BA | 0.9600 |
C9A—H9AB | 0.9600 | C9B—H9BB | 0.9600 |
C9A—H9AC | 0.9600 | C9B—H9BC | 0.9600 |
C10A—H10A | 0.9600 | C10B—H10D | 0.9600 |
C10A—H10B | 0.9600 | C10B—H10E | 0.9600 |
C10A—H10C | 0.9600 | C10B—H10F | 0.9600 |
C11A—C11Ai | 1.302 (17) | C11B—C11Bi | 1.530 (19) |
C11A—H11A | 0.9700 | C11B—H11C | 0.9700 |
C11A—H11B | 0.9700 | C11B—H11D | 0.9700 |
C6A—N2A—C5A | 120.6 (11) | C5B—N2B—C6B | 140 (2) |
C6A—N2A—H2AB | 119.7 | C5B—N2B—H2BB | 109.9 |
C5A—N2A—H2AB | 119.7 | C6B—N2B—H2BB | 109.9 |
C5A—N1A—C1A | 116.0 (7) | C5B—N1B—C1B | 121.6 (13) |
N1A—C1A—C2A | 123.4 (8) | N1B—C1B—C2B | 118.8 (13) |
N1A—C1A—C11A | 116.9 (8) | N1B—C1B—C11B | 113.3 (11) |
C2A—C1A—C11A | 119.4 (8) | C2B—C1B—C11B | 127.7 (12) |
C1A—C2A—C3A | 119.7 (8) | C1B—C2B—C3B | 117.1 (14) |
C1A—C2A—H2AA | 120.2 | C1B—C2B—H2BA | 121.5 |
C3A—C2A—H2AA | 120.2 | C3B—C2B—H2BA | 121.5 |
C2A—C3A—C4A | 117.8 (8) | C2B—C3B—C4B | 124.0 (14) |
C2A—C3A—H3AA | 121.1 | C2B—C3B—H3BA | 118.0 |
C4A—C3A—H3AA | 121.1 | C4B—C3B—H3BA | 118.0 |
C3A—C4A—C5A | 119.1 (7) | C5B—C4B—C3B | 114.1 (13) |
C3A—C4A—H4AA | 120.4 | C5B—C4B—H4BA | 123.0 |
C5A—C4A—H4AA | 120.4 | C3B—C4B—H4BA | 123.0 |
N1A—C5A—C4A | 123.5 (6) | N2B—C5B—N1B | 124.3 (18) |
N1A—C5A—N2A | 106.9 (8) | N2B—C5B—C4B | 112.4 (17) |
C4A—C5A—N2A | 129.6 (8) | N1B—C5B—C4B | 123.0 (14) |
O1A—C6A—N2A | 124.5 (10) | O1B—C6B—C7B | 125.0 (17) |
O1A—C6A—C7A | 118.5 (10) | O1B—C6B—N2B | 112 (2) |
N2A—C6A—C7A | 115.3 (9) | C7B—C6B—N2B | 118 (2) |
C8A—C7A—C9A | 118.5 (10) | C6B—C7B—C8B | 118 (2) |
C8A—C7A—C10A | 110.5 (7) | C6B—C7B—C9B | 116.9 (15) |
C9A—C7A—C10A | 106.5 (7) | C8B—C7B—C9B | 109.9 (16) |
C8A—C7A—C6A | 105.8 (8) | C6B—C7B—C10B | 105.0 (15) |
C9A—C7A—C6A | 108.6 (7) | C8B—C7B—C10B | 106.5 (14) |
C10A—C7A—C6A | 106.3 (9) | C9B—C7B—C10B | 98.3 (16) |
C7A—C8A—H8AA | 109.5 | C7B—C8B—H8BA | 109.5 |
C7A—C8A—H8AB | 109.5 | C7B—C8B—H8BB | 109.5 |
H8AA—C8A—H8AB | 109.5 | H8BA—C8B—H8BB | 109.5 |
C7A—C8A—H8AC | 109.5 | C7B—C8B—H8BC | 109.5 |
H8AA—C8A—H8AC | 109.5 | H8BA—C8B—H8BC | 109.5 |
H8AB—C8A—H8AC | 109.5 | H8BB—C8B—H8BC | 109.5 |
C7A—C9A—H9AA | 109.5 | C7B—C9B—H9BA | 109.5 |
C7A—C9A—H9AB | 109.5 | C7B—C9B—H9BB | 109.5 |
H9AA—C9A—H9AB | 109.5 | H9BA—C9B—H9BB | 109.5 |
C7A—C9A—H9AC | 109.5 | C7B—C9B—H9BC | 109.5 |
H9AA—C9A—H9AC | 109.5 | H9BA—C9B—H9BC | 109.5 |
H9AB—C9A—H9AC | 109.5 | H9BB—C9B—H9BC | 109.5 |
C7A—C10A—H10A | 109.5 | C7B—C10B—H10D | 109.5 |
C7A—C10A—H10B | 109.5 | C7B—C10B—H10E | 109.5 |
H10A—C10A—H10B | 109.5 | H10D—C10B—H10E | 109.5 |
C7A—C10A—H10C | 109.5 | C7B—C10B—H10F | 109.5 |
H10A—C10A—H10C | 109.5 | H10D—C10B—H10F | 109.5 |
H10B—C10A—H10C | 109.5 | H10E—C10B—H10F | 109.5 |
C11Ai—C11A—C1A | 122.2 (9) | C1B—C11B—C11Bi | 113.2 (10) |
C11Ai—C11A—H11A | 106.8 | C1B—C11B—H11C | 108.9 |
C1A—C11A—H11A | 106.8 | C11Bi—C11B—H11C | 108.9 |
C11Ai—C11A—H11B | 106.8 | C1B—C11B—H11D | 108.9 |
C1A—C11A—H11B | 106.8 | C11Bi—C11B—H11D | 108.9 |
H11A—C11A—H11B | 106.6 | H11C—C11B—H11D | 107.8 |
Symmetry code: (i) −x, −y+1, −z+1. |
D—H···A | D—H | H···A | D···A | D—H···A |
C10A—H10C···O1Aii | 0.96 | 2.46 | 3.409 (12) | 171 |
N2A—H2AB···O1Aii | 0.86 | 2.26 | 3.100 (16) | 168 |
Symmetry code: (ii) −x+1/2, y+1/2, z. |
Experimental details
Crystal data | |
Chemical formula | C22H30N4O2 |
Mr | 382.50 |
Crystal system, space group | Orthorhombic, Pbca |
Temperature (K) | 296 |
a, b, c (Å) | 11.7933 (3), 10.3648 (2), 17.8667 (4) |
V (Å3) | 2183.94 (9) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.08 |
Crystal size (mm) | 0.36 × 0.15 × 0.10 |
Data collection | |
Diffractometer | Bruker SMART APEXII CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2009) |
Tmin, Tmax | 0.973, 0.992 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 36712, 3221, 1678 |
Rint | 0.076 |
(sin θ/λ)max (Å−1) | 0.706 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.062, 0.161, 1.03 |
No. of reflections | 3221 |
No. of parameters | 256 |
No. of restraints | 12 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.17, −0.16 |
Computer programs: APEX2 (Bruker, 2009), SAINT (Bruker, 2009), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
C10A—H10C···O1Ai | 0.96 | 2.46 | 3.409 (12) | 170.6 |
N2A—H2AB···O1Ai | 0.86 | 2.26 | 3.100 (16) | 167.5 |
Symmetry code: (i) −x+1/2, y+1/2, z. |
Acknowledgements
HKF and WSL thank Universiti Sains Malaysia (USM) for the Research University Golden Goose Grant (No. 1001/PFIZIK/811012). NKD, DS and SG thank the DST [SR/S1/OC-13/2005] and CSIR [01 (1913)/04/EMR-II], Government of India, for financial support. WSL also thanks the Malaysian Government and USM for the award of a Research Fellowship. NKD also thanks the UGC, Government of India, for a Research Fellowship.
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The recognition of biologically important substrates like dicarboxylic acids by bis-pyridine amide is one of the most important areas of research in supramolecular chemistry as well as in the design of materials through new crystal engineering (Garcia-Tellado et al., 1990; Geib et al., 1993; Karle et al., 1997; Goswami, Dey, Fun et al., 2005; Goswami et al., 2006, 2008). The title compound can be used as receptor for dicarboxylic acids with the ethylene group acting as a spacer.
The title compound, (Fig. 1), lies about a crystallographic inversion center (symmetry code = -x, -y + 1, -z + 1). The molecule has a whole-molecule disorder over two positions with a refined ratio of 0.636 (10): 0.364 (10). In the molecule, the pyridine rings (C1–C5/N1) are approximately planar with the maximum deviations of 0.033 (10) Å at N1A and 0.063 (17) Å at C1B for the major and minor components, respectively. The mean planes of these pyridine rings form dihedral angles of 17 (2)° in the major component and 18 (2)° in the minor component with the respective formamide groups (N2/C6/O1) attached to them. This crystal structure is closely related to that of N-[6-(hydroxymethyl)pyridin-2-yl]-2,2-dimethylpropanamide (Goswami, Dey, Chantrapromma et al., 2005).
In the crystal packing (Fig. 2 & Fig. 3), intermolecular N—H···O and C—H···O hydrogen bonds (Table 1) link the molecules into a two-dimensional network parallel to the ab plane.