organic compounds
1-(3-Bromo-2-thienyl)ethanone
aDepartment of Studies in Physics, University of Mysore, Manasagangotri, Mysore 570 006, India, bDepartment of Biotechnology, Sri Jayachamarajendra College of Engineering, Mysore 570 006, India, and cDepartment of Studies in Chemistry, University of Mysore, Manasagangotri, Mysore 570 006, India
*Correspondence e-mail: nanju_xrd@yahoo.com
In the title compound, C6H5BrOS, the non-H and aromatic H atoms lie on a crystallographic mirror plane. In the crystal, molecules are linked into chains propagating along the c axis by intermolecular C—H⋯O hydrogen bonds.
Related literature
For the uses of acetyl thiophenes, see: Ashalatha et al. (2009); Bando et al. (2010); Ito & Furukawa (1990); Lutz et al. (2005); Nakayama et al. (1989); Pelly et al. (2005); Yasuhara et al. (2002).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2004); cell SAINT (Bruker, 2004); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009) and ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: SHELXL97 and PLATON.
Supporting information
10.1107/S1600536810034677/ci5166sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536810034677/ci5166Isup2.hkl
A three-necked, round-bottomed flask was charged with CH2Cl2 (10 ml) and anhydrous AlCl3 (2.45 g, 18.4 mmol). The flask was cooled to 273 K. A dropping funnel was charged with freshly distilled acetyl chloride (1.48 g, 19.6 mmol) in CH2Cl2 (15 ml), and was added drop wise for a period of 30 min. The reaction mixture was stirred for 1 h at 273 K. The reaction mass was further cooled to 250 K. 3-Bromothiophene (1.00 g, 6.13 mmol) in CH2Cl2 (15 mL) was added drop wise for 1 h. The reaction was stirred at 250 K for 30 min and then warmed slowly to room temperature and stirred for 1 h. Then the reaction mixture was quenched on ice water (50 ml). Layers were separated and aqueous layer was repeatedly extracted with CH2Cl2 and the combined organic extracts were washed with saturated NaHCO3 (25 ml), then brine (25 ml) and finally dried over anhydrous Na2SO4. Solvent was removed by distillation at atmospheric pressure. The remaining oily mass was distilled under high vacuum (403 K at 10 mbar) to give a pale yellow oil which was crystallized in n-hexane to give 2-acetyl-3-bromothiophene (1.10 g, 88 %) as a yellow solid. Block-shaped yellow single crystals were obtained by slow evaporation of an n-hexane solution.
H atoms were placed at idealized positions and allowed to ride on their parent atoms with C–H distances in the range 0.93–0.96 Å and Uiso(H) = 1.2-1.5Ueq(carrier atom).
Data collection: APEX2 (Bruker, 2004); cell
SAINT (Bruker, 2004); data reduction: SAINT (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009) and ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008) and PLATON (Spek, 2009).C6H5BrOS | F(000) = 800 |
Mr = 205.07 | Dx = 1.896 Mg m−3 |
Orthorhombic, Cmca | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2bc 2 | Cell parameters from 1982 reflections |
a = 6.8263 (17) Å | θ = 2.5–28.4° |
b = 13.149 (4) Å | µ = 5.92 mm−1 |
c = 16.007 (4) Å | T = 293 K |
V = 1436.8 (7) Å3 | Block, yellow |
Z = 8 | 0.25 × 0.21 × 0.20 mm |
Bruker APEXII CCD area-detector diffractometer | 973 independent reflections |
Radiation source: fine-focus sealed tube | 790 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.041 |
ω and ϕ scans | θmax = 28.4°, θmin = 2.5° |
Absorption correction: multi-scan (SADABS; Sheldrick, 2001) | h = −9→9 |
Tmin = 0.313, Tmax = 0.384 | k = −17→17 |
12363 measured reflections | l = −21→20 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.027 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.067 | H-atom parameters constrained |
S = 1.06 | w = 1/[σ2(Fo2) + (0.0333P)2 + 1.3829P] where P = (Fo2 + 2Fc2)/3 |
973 reflections | (Δ/σ)max = 0.001 |
56 parameters | Δρmax = 0.68 e Å−3 |
0 restraints | Δρmin = −0.48 e Å−3 |
C6H5BrOS | V = 1436.8 (7) Å3 |
Mr = 205.07 | Z = 8 |
Orthorhombic, Cmca | Mo Kα radiation |
a = 6.8263 (17) Å | µ = 5.92 mm−1 |
b = 13.149 (4) Å | T = 293 K |
c = 16.007 (4) Å | 0.25 × 0.21 × 0.20 mm |
Bruker APEXII CCD area-detector diffractometer | 973 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 2001) | 790 reflections with I > 2σ(I) |
Tmin = 0.313, Tmax = 0.384 | Rint = 0.041 |
12363 measured reflections |
R[F2 > 2σ(F2)] = 0.027 | 0 restraints |
wR(F2) = 0.067 | H-atom parameters constrained |
S = 1.06 | Δρmax = 0.68 e Å−3 |
973 reflections | Δρmin = −0.48 e Å−3 |
56 parameters |
Refinement. Refinement on F2 for ALL reflections except those flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > σ(F2) is used only for calculating -R-factor-obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Br1 | 0.00000 | 0.01659 (3) | 0.38478 (2) | 0.0547 (1) | |
S5 | 0.00000 | 0.33480 (6) | 0.30339 (5) | 0.0463 (3) | |
O8 | 0.00000 | 0.19098 (19) | 0.51639 (13) | 0.0584 (9) | |
C2 | 0.00000 | 0.1452 (2) | 0.33378 (18) | 0.0365 (9) | |
C3 | 0.00000 | 0.1547 (3) | 0.2458 (2) | 0.0448 (10) | |
C4 | 0.00000 | 0.2530 (3) | 0.2207 (2) | 0.0479 (10) | |
C6 | 0.00000 | 0.2366 (2) | 0.37465 (17) | 0.0357 (9) | |
C7 | 0.00000 | 0.2587 (2) | 0.46527 (19) | 0.0389 (9) | |
C9 | 0.00000 | 0.3685 (3) | 0.4922 (2) | 0.0541 (11) | |
H3 | 0.00000 | 0.09970 | 0.20930 | 0.0540* | |
H4 | 0.00000 | 0.27350 | 0.16510 | 0.0570* | |
H9A | 0.13140 | 0.39450 | 0.49060 | 0.0810* | 0.500 |
H9B | −0.05010 | 0.37360 | 0.54810 | 0.0810* | 0.500 |
H9C | −0.08130 | 0.40740 | 0.45510 | 0.0810* | 0.500 |
U11 | U22 | U33 | U12 | U13 | U23 | |
Br1 | 0.0910 (3) | 0.0316 (2) | 0.0415 (2) | 0.0000 | 0.0000 | −0.0009 (1) |
S5 | 0.0590 (5) | 0.0401 (4) | 0.0397 (4) | 0.0000 | 0.0000 | 0.0117 (3) |
O8 | 0.106 (2) | 0.0408 (13) | 0.0285 (12) | 0.0000 | 0.0000 | 0.0023 (10) |
C2 | 0.0400 (16) | 0.0399 (16) | 0.0297 (14) | 0.0000 | 0.0000 | 0.0021 (12) |
C3 | 0.0512 (18) | 0.0519 (18) | 0.0314 (15) | 0.0000 | 0.0000 | −0.0035 (13) |
C4 | 0.0526 (19) | 0.063 (2) | 0.0281 (14) | 0.0000 | 0.0000 | 0.0069 (14) |
C6 | 0.0428 (16) | 0.0333 (14) | 0.0309 (15) | 0.0000 | 0.0000 | 0.0057 (11) |
C7 | 0.0482 (17) | 0.0354 (15) | 0.0332 (15) | 0.0000 | 0.0000 | −0.0021 (12) |
C9 | 0.079 (2) | 0.0385 (16) | 0.0448 (19) | 0.0000 | 0.0000 | −0.0061 (14) |
Br1—C2 | 1.878 (3) | C3—H3 | 0.93 |
S5—C4 | 1.706 (4) | C4—H4 | 0.93 |
S5—C6 | 1.723 (3) | C9—H9A | 0.96 |
O8—C7 | 1.209 (4) | C9—H9B | 0.96 |
C2—C3 | 1.414 (4) | C9—H9C | 0.96 |
C2—C6 | 1.368 (4) | C9—H9Ai | 0.96 |
C3—C4 | 1.354 (6) | C9—H9Bi | 0.96 |
C6—C7 | 1.479 (4) | C9—H9Ci | 0.96 |
C7—C9 | 1.507 (5) | ||
Br1···O8 | 3.114 (3) | C3···C3xi | 3.4158 (11) |
Br1···Br1ii | 3.7144 (12) | C3···C3ix | 3.4158 (11) |
Br1···O8ii | 3.155 (3) | C3···C3vi | 3.4158 (11) |
Br1···S5iii | 3.8453 (15) | C4···O8xvi | 3.352 (4) |
Br1···Br1iv | 3.7144 (12) | C4···O8xvii | 3.352 (4) |
Br1···O8iv | 3.155 (3) | C4···S5x | 3.5993 (17) |
Br1···S5v | 3.8453 (15) | C4···S5xi | 3.5993 (17) |
S5···C4vi | 3.5993 (17) | C4···C4x | 3.5397 (16) |
S5···Br1vii | 3.8453 (15) | C4···C4xi | 3.5397 (16) |
S5···Br1viii | 3.8453 (15) | C4···S5ix | 3.5993 (17) |
S5···C4ix | 3.5993 (17) | C4···S5vi | 3.5993 (17) |
S5···C4x | 3.5993 (17) | C4···C4ix | 3.5397 (16) |
S5···C4xi | 3.5993 (17) | C4···C4vi | 3.5397 (16) |
S5···H9Ci | 2.6700 | C7···C7xiv | 3.5970 (17) |
S5···H9C | 2.6700 | C7···C7xviii | 3.5970 (17) |
O8···Br1 | 3.114 (3) | C7···C7xix | 3.5970 (17) |
O8···C4xii | 3.352 (4) | C7···C7xv | 3.5970 (17) |
O8···C4xiii | 3.352 (4) | C9···C9xx | 3.467 (6) |
O8···Br1ii | 3.155 (3) | C9···C9xxi | 3.467 (6) |
O8···Br1iv | 3.155 (3) | H4···O8xvi | 2.4300 |
O8···H4xii | 2.4300 | H4···O8xvii | 2.4300 |
O8···H4xiii | 2.4300 | H9A···O8xviii | 2.7600 |
O8···H9Axiv | 2.7600 | H9A···O8xv | 2.7600 |
O8···H9Axv | 2.7600 | H9C···S5 | 2.6700 |
C3···C3x | 3.4158 (11) | ||
C4—S5—C6 | 92.36 (16) | C7—C9—H9B | 109.00 |
Br1—C2—C3 | 120.8 (2) | C7—C9—H9C | 109.00 |
Br1—C2—C6 | 125.7 (2) | C7—C9—H9Ai | 109.00 |
C3—C2—C6 | 113.5 (3) | C7—C9—H9Bi | 109.00 |
C2—C3—C4 | 112.3 (3) | C7—C9—H9Ci | 109.00 |
S5—C4—C3 | 111.8 (2) | H9A—C9—H9B | 109.00 |
S5—C6—C2 | 110.0 (2) | H9A—C9—H9C | 109.00 |
S5—C6—C7 | 120.1 (2) | H9A—C9—H9Ai | 138.00 |
C2—C6—C7 | 129.9 (2) | H9A—C9—H9Bi | 71.00 |
O8—C7—C6 | 121.3 (3) | H9B—C9—H9C | 109.00 |
O8—C7—C9 | 120.8 (3) | H9Ai—C9—H9B | 71.00 |
C6—C7—C9 | 118.0 (2) | H9B—C9—H9Ci | 138.00 |
C2—C3—H3 | 124.00 | H9Bi—C9—H9C | 138.00 |
C4—C3—H3 | 124.00 | H9C—C9—H9Ci | 71.00 |
S5—C4—H4 | 124.00 | H9Ai—C9—H9Bi | 109.00 |
C3—C4—H4 | 124.00 | H9Ai—C9—H9Ci | 109.00 |
C7—C9—H9A | 109.00 | H9Bi—C9—H9Ci | 109.00 |
C6—S5—C4—C3 | 0.00 | C3—C2—C6—S5 | 0.00 |
C4—S5—C6—C2 | 0.00 | C3—C2—C6—C7 | 180.00 |
C4—S5—C6—C7 | −180.00 | C2—C3—C4—S5 | 0.00 |
Br1—C2—C3—C4 | −180.00 | S5—C6—C7—O8 | −180.00 |
C6—C2—C3—C4 | 0.00 | S5—C6—C7—C9 | 0.00 |
Br1—C2—C6—S5 | 180.00 | C2—C6—C7—O8 | 0.00 |
Br1—C2—C6—C7 | 0.00 | C2—C6—C7—C9 | −180.00 |
Symmetry codes: (i) −x, y, z; (ii) x, −y, −z+1; (iii) −x, y−1/2, −z+1/2; (iv) −x, −y, −z+1; (v) x, y−1/2, −z+1/2; (vi) x+1/2, y, −z+1/2; (vii) −x, y+1/2, −z+1/2; (viii) x, y+1/2, −z+1/2; (ix) x−1/2, y, −z+1/2; (x) −x−1/2, y, −z+1/2; (xi) −x+1/2, y, −z+1/2; (xii) −x, −y+1/2, z+1/2; (xiii) x, −y+1/2, z+1/2; (xiv) x−1/2, −y+1/2, −z+1; (xv) −x+1/2, −y+1/2, −z+1; (xvi) −x, −y+1/2, z−1/2; (xvii) x, −y+1/2, z−1/2; (xviii) x+1/2, −y+1/2, −z+1; (xix) −x−1/2, −y+1/2, −z+1; (xx) x, −y+1, −z+1; (xxi) −x, −y+1, −z+1. |
D—H···A | D—H | H···A | D···A | D—H···A |
C4—H4···O8xvi | 0.93 | 2.43 | 3.352 (4) | 174 |
Symmetry code: (xvi) −x, −y+1/2, z−1/2. |
Experimental details
Crystal data | |
Chemical formula | C6H5BrOS |
Mr | 205.07 |
Crystal system, space group | Orthorhombic, Cmca |
Temperature (K) | 293 |
a, b, c (Å) | 6.8263 (17), 13.149 (4), 16.007 (4) |
V (Å3) | 1436.8 (7) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 5.92 |
Crystal size (mm) | 0.25 × 0.21 × 0.20 |
Data collection | |
Diffractometer | Bruker APEXII CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 2001) |
Tmin, Tmax | 0.313, 0.384 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 12363, 973, 790 |
Rint | 0.041 |
(sin θ/λ)max (Å−1) | 0.670 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.027, 0.067, 1.06 |
No. of reflections | 973 |
No. of parameters | 56 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.68, −0.48 |
Computer programs: APEX2 (Bruker, 2004), SAINT (Bruker, 2004), SHELXS97 (Sheldrick, 2008), PLATON (Spek, 2009) and ORTEP-3 (Farrugia, 1997), SHELXL97 (Sheldrick, 2008) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
C4—H4···O8i | 0.93 | 2.43 | 3.352 (4) | 174 |
Symmetry code: (i) −x, −y+1/2, z−1/2. |
Acknowledgements
SNS is grateful to University Grants Commission (UGC), Government of India, for financial support under the major research project [grant No. 38–220/2009 (SR)]. SNS also expresses his sincere gratitude to J. S. S. Mahavidyapeetha for the encouragement towards this research work. MM thanks the University of Mysore for awarding a project (No. DV3/136/2007–2008/24.09.09).
References
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2-Acetyl-3-bromothiophene is one of the well-known bio-active intermediate used for the construction of number of new heterocycles (Lutz et al. 2005; Pelly et al. 2005). It is used as an intermediate for the synthesis of furo[3,2-a]carbazole alkaloid, furostifoline (Ito et al. 1990) and its derivatives, which show broad pharmacological properties (Yasuhara et al. 2002). Chalcones of 2-acetyl-3-bromothiophene exhibit promising anti-inflammatory, analgesic and antibacterial activities (Ashalatha et al. 2009). Acetyl thiophenes are useful as intermediates for preparing number of pharmaceutical compounds (Bando et al. 2010). Acetyl bromothiophenes are also used for the synthesis of number of biologically active pyridazine derivatives (Nakayama et al. 1989). With this background, the title compound (I), was synthesized and we report its crystal structure here.
The non-hydrogen and aromatic hydrogen atoms of the title molecule lie on a crystallographic mirror plane (Fig. 1). The molecules are linked into a chain along the c axis by intermolecular C—H···O hydrogen bonds (Table 1).