organic compounds
2,2′-(Disulfanediyl)dibenzoic acid–N,N′-bis(3-pyridylmethyl)ethanediamide (1/1)
aDepartment of Chemistry, The University of Texas at San Antonio, One UTSA Circle, San Antonio, Texas 78249-0698, USA, bChemical Abstracts Service, 2540 Olentangy River Rd, Columbus, Ohio 43202, USA, and cDepartment of Chemistry, University of Malaya, 50603 Kuala Lumpur, Malaysia
*Correspondence e-mail: edward.tiekink@gmail.com
The 14H14N4O2·C14H10O4S2, comprises a twisted 2,2′-(disulfanediyl)dibenzoic acid molecule [dihedral angle between the benzene rings = 76.35 (10)°] and a U-shaped N,N′-bis(3-pyridylmethyl)ethanediamide molecule with the pyridyl groups lying to the same side of the central diamide moiety [C—C—C—N = 113.8 (2) and −117.6 (2)°]. The latter aggregate into supramolecular tapes propagating along the a axis via centrosymmetric eight-membered amide {⋯OCNH}2 synthons. Intramolecular N—H⋯O hydrogen bonds are observed. The 2,2′-(disulfanediyl)dibenzoic acid molecules form carboxyl–pyridine O—H⋯N hydrogen bonds, bridging a pyridine residue below the plane of the tape and one above the plane with two intervening N,N′-bis(3-pyridylmethyl)ethanediamide molecules. The supramolecular chains are consolidated in the crystal packing by C—H⋯O contacts. An intermolecular C—H⋯S interaction also occurs.
of the title cocrystal, CRelated literature
For related studies on , 2010); Broker et al. (2008); Arman et al. (2010). For crystal engineering studies on N,N′-bis(3-pyridylmethyl)ethanediamide, see: Poplaukhin & Tiekink (2010).
formation involving 2-[(2-carboxyphenyl)disulfanyl]benzoic acid, see: Broker & Tiekink (2007Experimental
Crystal data
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Refinement
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Data collection: CrystalClear (Molecular Structure Corporation & Rigaku, 2005); cell CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEPII (Johnson, 1976) and DIAMOND (Brandenburg, 2006); software used to prepare material for publication: publCIF (Westrip, 2010).
Supporting information
10.1107/S1600536810036494/hg2712sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536810036494/hg2712Isup2.hkl
Equimolar amounts of 2-[(2-carboxyphenyl)disulfanyl]benzoic acid (Fluka) and N,N'-bis(3-pyridylmethyl)ethanediamide (Poplaukhin & Tiekink, 2010) were dissolved in a 1:1 ethanol/chloroform mixture. Crystals were harvested after a few days of slow evaporation.
C-bound H-atoms were placed in calculated positions (C–H 0.95–0.99 Å) and were included in the
in the riding model approximation with Uiso(H) set to 1.2–1.5Ueq(C). The O– and N-bound H-atoms were located in a difference Fourier map and were refined with distance restraints of O–H 0.840±0.001 Å and N—H = 0.880±0.001 Å, and with Uiso(H) = yUeq(carrier atom); y = 1.5 for O and y = 1.2 for N.Data collection: CrystalClear (Molecular Structure Corporation & Rigaku, 2005); cell
CrystalClear (Molecular Structure Corporation & Rigaku, 2005); data reduction: CrystalClear (Molecular Structure Corporation & Rigaku, 2005); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEPII (Johnson, 1976) and DIAMOND (Brandenburg, 2006); software used to prepare material for publication: publCIF (Westrip, 2010).Fig. 1. Molecular structure of 2-[(2-carboxyphenyl)disulfanyl]benzoic acid found in the structure of (I) showing atom-labelling scheme and displacement ellipsoids at the 50% probability level. | |
Fig. 2. Molecular structure of N,N'-bis(3-pyridylmethyl)ethanediamide found in the structure of (I) showing atom-labelling scheme and displacement ellipsoids at the 50% probability level. | |
Fig. 3. Supramolecular chain along the a axis in (I). The O—H···N and N—H···O hydrogen bonds are shown as orange dashed lines. | |
Fig. 4. End-on view of the supramolecular chain along the a axis in (I). The O—H···N and N—H···O hydrogen bonds are shown as orange dashed lines. | |
Fig. 5. View in projection down the a axis in (I) showing the crystal packing. The O—H···N and N—H···O hydrogen bonds are shown as orange dashed lines, and C—H···O interactions are shown as blue dashed lines. |
C14H14N4O2·C14H10O4S2 | Z = 2 |
Mr = 576.63 | F(000) = 600 |
Triclinic, P1 | Dx = 1.368 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71069 Å |
a = 10.015 (3) Å | Cell parameters from 5721 reflections |
b = 10.310 (3) Å | θ = 2.2–40.6° |
c = 14.795 (4) Å | µ = 0.24 mm−1 |
α = 86.910 (16)° | T = 98 K |
β = 78.052 (15)° | Block, colourless |
γ = 69.554 (10)° | 0.50 × 0.19 × 0.10 mm |
V = 1400.1 (7) Å3 |
Rigaku AFC12K/SATURN724 diffractometer | 6365 independent reflections |
Radiation source: fine-focus sealed tube | 5644 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.031 |
ω scans | θmax = 27.5°, θmin = 2.2° |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | h = −10→13 |
Tmin = 0.755, Tmax = 1.000 | k = −12→13 |
10806 measured reflections | l = −18→19 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.051 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.120 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.09 | w = 1/[σ2(Fo2) + (0.0472P)2 + 0.7689P] where P = (Fo2 + 2Fc2)/3 |
6365 reflections | (Δ/σ)max = 0.001 |
373 parameters | Δρmax = 0.36 e Å−3 |
4 restraints | Δρmin = −0.41 e Å−3 |
C14H14N4O2·C14H10O4S2 | γ = 69.554 (10)° |
Mr = 576.63 | V = 1400.1 (7) Å3 |
Triclinic, P1 | Z = 2 |
a = 10.015 (3) Å | Mo Kα radiation |
b = 10.310 (3) Å | µ = 0.24 mm−1 |
c = 14.795 (4) Å | T = 98 K |
α = 86.910 (16)° | 0.50 × 0.19 × 0.10 mm |
β = 78.052 (15)° |
Rigaku AFC12K/SATURN724 diffractometer | 6365 independent reflections |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | 5644 reflections with I > 2σ(I) |
Tmin = 0.755, Tmax = 1.000 | Rint = 0.031 |
10806 measured reflections |
R[F2 > 2σ(F2)] = 0.051 | 4 restraints |
wR(F2) = 0.120 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.09 | Δρmax = 0.36 e Å−3 |
6365 reflections | Δρmin = −0.41 e Å−3 |
373 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S1 | 0.95625 (5) | 0.47011 (5) | 0.27148 (3) | 0.02334 (12) | |
S2 | 0.77520 (5) | 0.41447 (5) | 0.31055 (3) | 0.02470 (12) | |
O1 | 0.57298 (14) | 0.09350 (15) | 0.05444 (10) | 0.0277 (3) | |
O2 | 0.92729 (14) | −0.08648 (15) | −0.06739 (10) | 0.0274 (3) | |
O3 | 1.18914 (15) | 0.52923 (14) | 0.18911 (10) | 0.0261 (3) | |
O4 | 1.20535 (15) | 0.73668 (15) | 0.14860 (11) | 0.0292 (3) | |
H1o | 1.2938 (7) | 0.688 (2) | 0.1330 (18) | 0.044* | |
O5 | 0.57421 (16) | 0.29499 (15) | 0.34728 (10) | 0.0274 (3) | |
O6 | 0.49044 (17) | 0.21673 (18) | 0.48313 (10) | 0.0324 (4) | |
H2o | 0.437 (2) | 0.194 (3) | 0.4549 (17) | 0.049* | |
N1 | 0.48914 (18) | 0.59287 (18) | 0.10362 (12) | 0.0262 (4) | |
N2 | 0.78541 (17) | 0.12250 (17) | 0.06156 (11) | 0.0222 (3) | |
H1n | 0.8801 (4) | 0.093 (2) | 0.0407 (14) | 0.027* | |
N3 | 0.70914 (17) | −0.09173 (17) | −0.08631 (12) | 0.0231 (3) | |
H2n | 0.6141 (4) | −0.064 (2) | −0.0674 (15) | 0.028* | |
N4 | 0.67717 (19) | −0.14651 (19) | −0.39347 (12) | 0.0283 (4) | |
C1 | 0.6801 (2) | 0.3730 (2) | 0.10738 (13) | 0.0212 (4) | |
C2 | 0.5347 (2) | 0.4577 (2) | 0.12348 (13) | 0.0233 (4) | |
H2 | 0.4635 | 0.4178 | 0.1500 | 0.028* | |
C3 | 0.5902 (2) | 0.6486 (2) | 0.06698 (16) | 0.0332 (5) | |
H3 | 0.5598 | 0.7446 | 0.0540 | 0.040* | |
C4 | 0.7377 (2) | 0.5712 (3) | 0.04726 (17) | 0.0363 (5) | |
H4 | 0.8066 | 0.6133 | 0.0200 | 0.044* | |
C5 | 0.7829 (2) | 0.4320 (2) | 0.06776 (15) | 0.0293 (4) | |
H5 | 0.8834 | 0.3773 | 0.0548 | 0.035* | |
C6 | 0.7231 (2) | 0.2239 (2) | 0.13762 (13) | 0.0222 (4) | |
H6A | 0.7947 | 0.2082 | 0.1778 | 0.027* | |
H6B | 0.6360 | 0.2085 | 0.1750 | 0.027* | |
C7 | 0.7054 (2) | 0.06452 (19) | 0.02830 (13) | 0.0209 (4) | |
C8 | 0.7929 (2) | −0.0458 (2) | −0.04751 (13) | 0.0225 (4) | |
C9 | 0.7676 (2) | −0.2038 (2) | −0.15588 (14) | 0.0249 (4) | |
H9A | 0.7105 | −0.2664 | −0.1422 | 0.030* | |
H9B | 0.8694 | −0.2581 | −0.1517 | 0.030* | |
C10 | 0.7639 (2) | −0.1524 (2) | −0.25316 (14) | 0.0253 (4) | |
C11 | 0.6821 (2) | −0.1873 (2) | −0.30620 (14) | 0.0253 (4) | |
H11 | 0.6266 | −0.2430 | −0.2794 | 0.030* | |
C12 | 0.7536 (3) | −0.0680 (3) | −0.43111 (17) | 0.0391 (5) | |
H12 | 0.7508 | −0.0393 | −0.4930 | 0.047* | |
C13 | 0.8371 (4) | −0.0266 (4) | −0.3833 (2) | 0.0588 (8) | |
H13 | 0.8907 | 0.0300 | −0.4115 | 0.071* | |
C14 | 0.8410 (3) | −0.0696 (3) | −0.29329 (19) | 0.0517 (7) | |
H14 | 0.8972 | −0.0418 | −0.2590 | 0.062* | |
C15 | 0.9789 (2) | 0.7291 (2) | 0.23181 (13) | 0.0219 (4) | |
C16 | 0.8894 (2) | 0.65541 (19) | 0.27535 (13) | 0.0220 (4) | |
C17 | 0.7493 (2) | 0.7285 (2) | 0.32319 (14) | 0.0269 (4) | |
H17 | 0.6887 | 0.6794 | 0.3536 | 0.032* | |
C18 | 0.6974 (2) | 0.8720 (2) | 0.32683 (16) | 0.0321 (5) | |
H18 | 0.6020 | 0.9204 | 0.3601 | 0.039* | |
C19 | 0.7833 (2) | 0.9455 (2) | 0.28253 (16) | 0.0327 (5) | |
H19 | 0.7472 | 1.0438 | 0.2850 | 0.039* | |
C20 | 0.9230 (2) | 0.8740 (2) | 0.23438 (14) | 0.0273 (4) | |
H20 | 0.9814 | 0.9243 | 0.2027 | 0.033* | |
C21 | 1.1338 (2) | 0.6551 (2) | 0.18689 (13) | 0.0221 (4) | |
C22 | 0.7479 (2) | 0.40288 (19) | 0.43378 (13) | 0.0220 (4) | |
C23 | 0.6509 (2) | 0.3389 (2) | 0.48074 (13) | 0.0223 (4) | |
C24 | 0.6283 (2) | 0.3319 (2) | 0.57712 (14) | 0.0279 (4) | |
H24 | 0.5644 | 0.2871 | 0.6089 | 0.033* | |
C25 | 0.6978 (2) | 0.3893 (2) | 0.62702 (15) | 0.0315 (5) | |
H25 | 0.6802 | 0.3855 | 0.6925 | 0.038* | |
C26 | 0.7928 (2) | 0.4519 (2) | 0.58043 (15) | 0.0293 (4) | |
H26 | 0.8411 | 0.4909 | 0.6142 | 0.035* | |
C27 | 0.8185 (2) | 0.4583 (2) | 0.48487 (15) | 0.0274 (4) | |
H27 | 0.8849 | 0.5009 | 0.4538 | 0.033* | |
C28 | 0.5689 (2) | 0.2819 (2) | 0.43016 (14) | 0.0230 (4) |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0235 (2) | 0.0226 (2) | 0.0238 (3) | −0.00938 (18) | −0.00082 (18) | −0.00458 (17) |
S2 | 0.0287 (3) | 0.0311 (3) | 0.0190 (2) | −0.0164 (2) | −0.00315 (19) | −0.00354 (18) |
O1 | 0.0151 (6) | 0.0334 (8) | 0.0350 (8) | −0.0080 (6) | −0.0035 (6) | −0.0117 (6) |
O2 | 0.0158 (6) | 0.0346 (8) | 0.0316 (8) | −0.0075 (6) | −0.0036 (6) | −0.0119 (6) |
O3 | 0.0243 (7) | 0.0246 (7) | 0.0284 (8) | −0.0087 (6) | −0.0019 (6) | −0.0029 (6) |
O4 | 0.0231 (7) | 0.0279 (8) | 0.0345 (8) | −0.0095 (6) | −0.0013 (6) | 0.0058 (6) |
O5 | 0.0319 (7) | 0.0352 (8) | 0.0198 (7) | −0.0171 (6) | −0.0054 (6) | −0.0021 (6) |
O6 | 0.0339 (8) | 0.0519 (10) | 0.0230 (8) | −0.0280 (8) | −0.0084 (6) | 0.0042 (7) |
N1 | 0.0260 (8) | 0.0275 (9) | 0.0246 (9) | −0.0091 (7) | −0.0045 (7) | 0.0016 (7) |
N2 | 0.0174 (7) | 0.0259 (8) | 0.0224 (8) | −0.0060 (6) | −0.0026 (6) | −0.0078 (6) |
N3 | 0.0165 (7) | 0.0258 (8) | 0.0271 (9) | −0.0065 (6) | −0.0036 (6) | −0.0092 (7) |
N4 | 0.0274 (9) | 0.0337 (9) | 0.0264 (9) | −0.0136 (7) | −0.0053 (7) | −0.0017 (7) |
C1 | 0.0234 (9) | 0.0260 (9) | 0.0156 (9) | −0.0097 (8) | −0.0041 (7) | −0.0029 (7) |
C2 | 0.0229 (9) | 0.0274 (10) | 0.0206 (10) | −0.0106 (8) | −0.0030 (7) | −0.0009 (7) |
C3 | 0.0323 (11) | 0.0325 (11) | 0.0360 (12) | −0.0133 (9) | −0.0082 (9) | 0.0091 (9) |
C4 | 0.0283 (11) | 0.0410 (13) | 0.0415 (13) | −0.0176 (10) | −0.0044 (9) | 0.0127 (10) |
C5 | 0.0221 (9) | 0.0364 (11) | 0.0295 (11) | −0.0105 (8) | −0.0059 (8) | 0.0048 (9) |
C6 | 0.0227 (9) | 0.0259 (9) | 0.0186 (9) | −0.0086 (7) | −0.0038 (7) | −0.0046 (7) |
C7 | 0.0183 (8) | 0.0229 (9) | 0.0232 (10) | −0.0078 (7) | −0.0063 (7) | −0.0020 (7) |
C8 | 0.0198 (9) | 0.0254 (9) | 0.0229 (10) | −0.0074 (7) | −0.0047 (7) | −0.0035 (7) |
C9 | 0.0245 (9) | 0.0247 (9) | 0.0262 (10) | −0.0069 (8) | −0.0069 (8) | −0.0085 (8) |
C10 | 0.0244 (9) | 0.0281 (10) | 0.0241 (10) | −0.0097 (8) | −0.0037 (8) | −0.0069 (8) |
C11 | 0.0249 (9) | 0.0293 (10) | 0.0242 (10) | −0.0125 (8) | −0.0035 (8) | −0.0043 (8) |
C12 | 0.0478 (14) | 0.0460 (14) | 0.0329 (13) | −0.0273 (12) | −0.0095 (10) | 0.0035 (10) |
C13 | 0.082 (2) | 0.080 (2) | 0.0464 (16) | −0.0664 (19) | −0.0207 (15) | 0.0162 (15) |
C14 | 0.0701 (19) | 0.076 (2) | 0.0388 (14) | −0.0562 (17) | −0.0209 (13) | 0.0040 (13) |
C15 | 0.0218 (9) | 0.0252 (9) | 0.0187 (9) | −0.0076 (7) | −0.0046 (7) | −0.0005 (7) |
C16 | 0.0248 (9) | 0.0230 (9) | 0.0190 (9) | −0.0079 (7) | −0.0057 (7) | −0.0022 (7) |
C17 | 0.0247 (10) | 0.0277 (10) | 0.0264 (11) | −0.0080 (8) | −0.0027 (8) | −0.0001 (8) |
C18 | 0.0261 (10) | 0.0280 (11) | 0.0333 (12) | −0.0020 (8) | 0.0004 (8) | −0.0006 (8) |
C19 | 0.0372 (12) | 0.0220 (10) | 0.0323 (12) | −0.0042 (9) | −0.0034 (9) | 0.0013 (8) |
C20 | 0.0298 (10) | 0.0251 (10) | 0.0262 (10) | −0.0107 (8) | −0.0030 (8) | 0.0037 (8) |
C21 | 0.0232 (9) | 0.0276 (10) | 0.0175 (9) | −0.0108 (8) | −0.0044 (7) | −0.0003 (7) |
C22 | 0.0228 (9) | 0.0231 (9) | 0.0197 (9) | −0.0073 (7) | −0.0036 (7) | −0.0038 (7) |
C23 | 0.0207 (9) | 0.0256 (9) | 0.0212 (10) | −0.0073 (7) | −0.0062 (7) | −0.0015 (7) |
C24 | 0.0250 (10) | 0.0384 (11) | 0.0219 (10) | −0.0129 (9) | −0.0046 (8) | 0.0003 (8) |
C25 | 0.0325 (11) | 0.0457 (13) | 0.0180 (10) | −0.0143 (10) | −0.0069 (8) | −0.0015 (9) |
C26 | 0.0301 (10) | 0.0372 (11) | 0.0253 (11) | −0.0139 (9) | −0.0108 (8) | −0.0039 (8) |
C27 | 0.0272 (10) | 0.0312 (10) | 0.0277 (11) | −0.0126 (8) | −0.0086 (8) | −0.0030 (8) |
C28 | 0.0195 (9) | 0.0252 (9) | 0.0240 (10) | −0.0076 (7) | −0.0031 (7) | −0.0030 (7) |
S1—C16 | 1.790 (2) | C9—C10 | 1.510 (3) |
S1—S2 | 2.0514 (9) | C9—H9A | 0.9900 |
S2—C22 | 1.791 (2) | C9—H9B | 0.9900 |
O1—C7 | 1.233 (2) | C10—C14 | 1.376 (3) |
O2—C8 | 1.237 (2) | C10—C11 | 1.386 (3) |
O3—C21 | 1.222 (2) | C11—H11 | 0.9500 |
O4—C21 | 1.321 (2) | C12—C13 | 1.382 (3) |
O4—H1o | 0.841 (15) | C12—H12 | 0.9500 |
O5—C28 | 1.219 (2) | C13—C14 | 1.384 (4) |
O6—C28 | 1.319 (2) | C13—H13 | 0.9500 |
O6—H2o | 0.84 (2) | C14—H14 | 0.9500 |
N1—C3 | 1.339 (3) | C15—C20 | 1.400 (3) |
N1—C2 | 1.343 (3) | C15—C16 | 1.407 (3) |
N2—C7 | 1.331 (2) | C15—C21 | 1.494 (3) |
N2—C6 | 1.459 (2) | C16—C17 | 1.395 (3) |
N2—H1n | 0.880 (12) | C17—C18 | 1.387 (3) |
N3—C8 | 1.328 (2) | C17—H17 | 0.9500 |
N3—C9 | 1.464 (2) | C18—C19 | 1.382 (3) |
N3—H2n | 0.880 (13) | C18—H18 | 0.9500 |
N4—C12 | 1.326 (3) | C19—C20 | 1.389 (3) |
N4—C11 | 1.342 (3) | C19—H19 | 0.9500 |
C1—C5 | 1.386 (3) | C20—H20 | 0.9500 |
C1—C2 | 1.390 (3) | C22—C27 | 1.396 (3) |
C1—C6 | 1.514 (3) | C22—C23 | 1.407 (3) |
C2—H2 | 0.9500 | C23—C24 | 1.399 (3) |
C3—C4 | 1.388 (3) | C23—C28 | 1.489 (3) |
C3—H3 | 0.9500 | C24—C25 | 1.388 (3) |
C4—C5 | 1.383 (3) | C24—H24 | 0.9500 |
C4—H4 | 0.9500 | C25—C26 | 1.381 (3) |
C5—H5 | 0.9500 | C25—H25 | 0.9500 |
C6—H6A | 0.9900 | C26—C27 | 1.386 (3) |
C6—H6B | 0.9900 | C26—H26 | 0.9500 |
C7—C8 | 1.534 (3) | C27—H27 | 0.9500 |
C16—S1—S2 | 105.30 (7) | N4—C12—C13 | 122.2 (2) |
C22—S2—S1 | 105.35 (7) | N4—C12—H12 | 118.9 |
C21—O4—H1O | 108 (2) | C13—C12—H12 | 118.9 |
C28—O6—H2O | 113 (2) | C12—C13—C14 | 118.5 (2) |
C3—N1—C2 | 117.81 (18) | C12—C13—H13 | 120.8 |
C7—N2—C6 | 121.95 (16) | C14—C13—H13 | 120.8 |
C7—N2—H1N | 119 (2) | C10—C14—C13 | 120.4 (2) |
C6—N2—H1N | 119 (2) | C10—C14—H14 | 119.8 |
C8—N3—C9 | 123.05 (16) | C13—C14—H14 | 119.8 |
C8—N3—H2N | 122 (2) | C20—C15—C16 | 119.16 (18) |
C9—N3—H2N | 114 (2) | C20—C15—C21 | 119.88 (17) |
C12—N4—C11 | 118.65 (18) | C16—C15—C21 | 120.90 (17) |
C5—C1—C2 | 117.70 (18) | C17—C16—C15 | 119.16 (18) |
C5—C1—C6 | 121.89 (18) | C17—C16—S1 | 120.49 (15) |
C2—C1—C6 | 120.31 (17) | C15—C16—S1 | 120.34 (15) |
N1—C2—C1 | 123.64 (18) | C18—C17—C16 | 120.66 (19) |
N1—C2—H2 | 118.2 | C18—C17—H17 | 119.7 |
C1—C2—H2 | 118.2 | C16—C17—H17 | 119.7 |
N1—C3—C4 | 122.4 (2) | C19—C18—C17 | 120.6 (2) |
N1—C3—H3 | 118.8 | C19—C18—H18 | 119.7 |
C4—C3—H3 | 118.8 | C17—C18—H18 | 119.7 |
C5—C4—C3 | 119.1 (2) | C18—C19—C20 | 119.35 (19) |
C5—C4—H4 | 120.4 | C18—C19—H19 | 120.3 |
C3—C4—H4 | 120.4 | C20—C19—H19 | 120.3 |
C4—C5—C1 | 119.31 (19) | C19—C20—C15 | 121.01 (19) |
C4—C5—H5 | 120.3 | C19—C20—H20 | 119.5 |
C1—C5—H5 | 120.3 | C15—C20—H20 | 119.5 |
N2—C6—C1 | 114.21 (16) | O3—C21—O4 | 123.62 (18) |
N2—C6—H6A | 108.7 | O3—C21—C15 | 121.66 (17) |
C1—C6—H6A | 108.7 | O4—C21—C15 | 114.67 (17) |
N2—C6—H6B | 108.7 | C27—C22—C23 | 118.96 (18) |
C1—C6—H6B | 108.7 | C27—C22—S2 | 121.54 (16) |
H6A—C6—H6B | 107.6 | C23—C22—S2 | 119.48 (14) |
O1—C7—N2 | 124.84 (18) | C24—C23—C22 | 119.26 (17) |
O1—C7—C8 | 121.27 (16) | C24—C23—C28 | 119.37 (18) |
N2—C7—C8 | 113.89 (16) | C22—C23—C28 | 121.35 (17) |
O2—C8—N3 | 125.32 (18) | C25—C24—C23 | 121.1 (2) |
O2—C8—C7 | 121.87 (16) | C25—C24—H24 | 119.5 |
N3—C8—C7 | 112.80 (16) | C23—C24—H24 | 119.5 |
N3—C9—C10 | 113.04 (17) | C26—C25—C24 | 119.32 (19) |
N3—C9—H9A | 109.0 | C26—C25—H25 | 120.3 |
C10—C9—H9A | 109.0 | C24—C25—H25 | 120.3 |
N3—C9—H9B | 109.0 | C25—C26—C27 | 120.63 (18) |
C10—C9—H9B | 109.0 | C25—C26—H26 | 119.7 |
H9A—C9—H9B | 107.8 | C27—C26—H26 | 119.7 |
C14—C10—C11 | 117.0 (2) | C26—C27—C22 | 120.76 (19) |
C14—C10—C9 | 122.02 (18) | C26—C27—H27 | 119.6 |
C11—C10—C9 | 121.01 (18) | C22—C27—H27 | 119.6 |
N4—C11—C10 | 123.35 (19) | O5—C28—O6 | 123.38 (17) |
N4—C11—H11 | 118.3 | O5—C28—C23 | 122.65 (18) |
C10—C11—H11 | 118.3 | O6—C28—C23 | 113.97 (17) |
C16—S1—S2—C22 | −88.85 (9) | C20—C15—C16—S1 | 178.78 (15) |
C3—N1—C2—C1 | −0.6 (3) | C21—C15—C16—S1 | −4.0 (2) |
C5—C1—C2—N1 | −0.7 (3) | S2—S1—C16—C17 | 16.77 (17) |
C6—C1—C2—N1 | 175.91 (17) | S2—S1—C16—C15 | −164.61 (14) |
C2—N1—C3—C4 | 1.6 (3) | C15—C16—C17—C18 | 1.0 (3) |
N1—C3—C4—C5 | −1.4 (4) | S1—C16—C17—C18 | 179.59 (17) |
C3—C4—C5—C1 | 0.1 (3) | C16—C17—C18—C19 | 0.5 (3) |
C2—C1—C5—C4 | 0.9 (3) | C17—C18—C19—C20 | −0.3 (3) |
C6—C1—C5—C4 | −175.63 (19) | C18—C19—C20—C15 | −1.4 (3) |
C7—N2—C6—C1 | −96.1 (2) | C16—C15—C20—C19 | 2.9 (3) |
C5—C1—C6—N2 | −69.8 (2) | C21—C15—C20—C19 | −174.42 (19) |
C2—C1—C6—N2 | 113.8 (2) | C20—C15—C21—O3 | 174.69 (18) |
C6—N2—C7—O1 | 3.2 (3) | C16—C15—C21—O3 | −2.5 (3) |
C6—N2—C7—C8 | −176.49 (17) | C20—C15—C21—O4 | −2.8 (3) |
C9—N3—C8—O2 | 3.2 (3) | C16—C15—C21—O4 | 179.98 (17) |
C9—N3—C8—C7 | −175.71 (17) | S1—S2—C22—C27 | 14.52 (18) |
O1—C7—C8—O2 | −172.03 (19) | S1—S2—C22—C23 | −166.75 (14) |
N2—C7—C8—O2 | 7.7 (3) | C27—C22—C23—C24 | −0.3 (3) |
O1—C7—C8—N3 | 6.9 (3) | S2—C22—C23—C24 | −179.10 (15) |
N2—C7—C8—N3 | −173.41 (17) | C27—C22—C23—C28 | 178.05 (18) |
C8—N3—C9—C10 | −101.3 (2) | S2—C22—C23—C28 | −0.7 (3) |
N3—C9—C10—C14 | 62.5 (3) | C22—C23—C24—C25 | 1.3 (3) |
N3—C9—C10—C11 | −117.6 (2) | C28—C23—C24—C25 | −177.13 (19) |
C12—N4—C11—C10 | −0.4 (3) | C23—C24—C25—C26 | −1.3 (3) |
C14—C10—C11—N4 | 1.1 (3) | C24—C25—C26—C27 | 0.3 (3) |
C9—C10—C11—N4 | −178.77 (18) | C25—C26—C27—C22 | 0.6 (3) |
C11—N4—C12—C13 | −0.3 (4) | C23—C22—C27—C26 | −0.6 (3) |
N4—C12—C13—C14 | 0.3 (5) | S2—C22—C27—C26 | 178.14 (16) |
C11—C10—C14—C13 | −1.1 (4) | C24—C23—C28—O5 | 173.73 (19) |
C9—C10—C14—C13 | 178.8 (3) | C22—C23—C28—O5 | −4.6 (3) |
C12—C13—C14—C10 | 0.4 (5) | C24—C23—C28—O6 | −6.2 (3) |
C20—C15—C16—C17 | −2.6 (3) | C22—C23—C28—O6 | 175.45 (18) |
C21—C15—C16—C17 | 174.65 (18) |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H1n···O2 | 0.88 (1) | 2.37 (2) | 2.736 (2) | 105 (1) |
N2—H1n···O2i | 0.88 (1) | 2.03 (1) | 2.789 (3) | 144 (2) |
N3—H2n···O1 | 0.88 (1) | 2.37 (2) | 2.698 (2) | 103 (1) |
N3—H2n···O1ii | 0.88 (1) | 1.97 (1) | 2.773 (3) | 151 (2) |
O4—H1o···N1iii | 0.84 (2) | 1.83 (2) | 2.664 (3) | 175 (1) |
O6—H2o···N4ii | 0.84 (2) | 1.80 (2) | 2.641 (3) | 179 (4) |
C2—H2···O3iv | 0.95 | 2.53 | 3.220 (3) | 129 |
C3—H3···O1v | 0.95 | 2.48 | 3.261 (3) | 139 |
C9—H9b···S1i | 0.99 | 2.73 | 3.370 (2) | 123 |
Symmetry codes: (i) −x+2, −y, −z; (ii) −x+1, −y, −z; (iii) x+1, y, z; (iv) x−1, y, z; (v) −x+1, −y+1, −z. |
Experimental details
Crystal data | |
Chemical formula | C14H14N4O2·C14H10O4S2 |
Mr | 576.63 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 98 |
a, b, c (Å) | 10.015 (3), 10.310 (3), 14.795 (4) |
α, β, γ (°) | 86.910 (16), 78.052 (15), 69.554 (10) |
V (Å3) | 1400.1 (7) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.24 |
Crystal size (mm) | 0.50 × 0.19 × 0.10 |
Data collection | |
Diffractometer | Rigaku AFC12K/SATURN724 diffractometer |
Absorption correction | Multi-scan (ABSCOR; Higashi, 1995) |
Tmin, Tmax | 0.755, 1.000 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 10806, 6365, 5644 |
Rint | 0.031 |
(sin θ/λ)max (Å−1) | 0.650 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.051, 0.120, 1.09 |
No. of reflections | 6365 |
No. of parameters | 373 |
No. of restraints | 4 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.36, −0.41 |
Computer programs: CrystalClear (Molecular Structure Corporation & Rigaku, 2005), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEPII (Johnson, 1976) and DIAMOND (Brandenburg, 2006), publCIF (Westrip, 2010).
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H1n···O2 | 0.880 (12) | 2.37 (2) | 2.736 (2) | 105.4 (12) |
N2—H1n···O2i | 0.880 (12) | 2.026 (10) | 2.789 (3) | 144.4 (17) |
N3—H2n···O1 | 0.880 (13) | 2.37 (2) | 2.698 (2) | 102.6 (12) |
N3—H2n···O1ii | 0.880 (13) | 1.971 (10) | 2.773 (3) | 151.0 (18) |
O4—H1o···N1iii | 0.841 (15) | 1.825 (15) | 2.664 (3) | 175.4 (14) |
O6—H2o···N4ii | 0.84 (2) | 1.80 (2) | 2.641 (3) | 179 (4) |
C2—H2···O3iv | 0.95 | 2.53 | 3.220 (3) | 129 |
C3—H3···O1v | 0.95 | 2.48 | 3.261 (3) | 139 |
C9—H9b···S1i | 0.99 | 2.73 | 3.370 (2) | 123 |
Symmetry codes: (i) −x+2, −y, −z; (ii) −x+1, −y, −z; (iii) x+1, y, z; (iv) x−1, y, z; (v) −x+1, −y+1, −z. |
References
Arman, H. D., Kaulgud, T. & Tiekink, E. R. T. (2010). Acta Cryst. E66, o2117. Web of Science CSD CrossRef IUCr Journals Google Scholar
Brandenburg, K. (2006). DIAMOND. Crystal Impact GbR, Bonn, Germany. Google Scholar
Broker, G. A., Bettens, R. P. A. & Tiekink, E. R. T. (2008). CrystEngComm, 10, 879–887. Web of Science CSD CrossRef CAS Google Scholar
Broker, G. A. & Tiekink, E. R. T. (2007). CrystEngComm, 9, 1096–1109. Web of Science CSD CrossRef CAS Google Scholar
Broker, G. A. & Tiekink, E. R. T. (2010). Acta Cryst. E66, o705. Web of Science CSD CrossRef IUCr Journals Google Scholar
Higashi, T. (1995). ABSCOR. Rigaku Corporation, Tokyo, Japan. Google Scholar
Johnson, C. K. (1976). ORTEPII. Report ORNL-5138. Oak Ridge National Laboratory, Tennessee, USA. Google Scholar
Molecular Structure Corporation & Rigaku (2005). CrystalClear. MSC, The Woodlands, Texas, USA, and Rigaku Corporation, Tokyo, Japan. Google Scholar
Poplaukhin, P. & Tiekink, E. R. T. (2010). CrystEngComm, 12, 1302–1306. Web of Science CSD CrossRef Google Scholar
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
As a continuation of studies into the phenomenon of co-crystallization of 2-[(2-carboxyphenyl)disulfanyl]benzoic acid (Broker & Tiekink, 2007; Broker et al., 2008; Broker & Tiekink, 2010; Arman et al., 2010), the co-crystallization of 2,2'-(disulfanediyl)dibenzoic acid and N,N'-bis(3-pyridylmethyl)ethanediamide (Poplaukhin & Tiekink, 2010) was investigated. The asymmetric unit of the resulting co-crystal contains one molecule of 2,2'-(disulfanediyl)dibenzoic acid, Fig. 1, and N,N'-bis(3-pyridylmethyl)ethanediamide, Fig. 2.
The 2,2'-(disulfanediyl)dibenzoic acid molecule adopts the expected conformation (Broker & Tiekink, 2007), stabilized in part by two close S···O(carbonyl) interactions, i.e. S1···O3 = 2.6520 (18) Å and S2···O5 = 2.6593 (19) Å; the dihedral angle formed between the benzene rings = 76.35 (10) °. The N,N'-bis(3-pyridylmethyl)ethanediamide molecule adopts a U-shape with the pyridyl groups lying to the same side of the central diamide moiety [C2—C1—C6—N2 = 113.8 (2) ° and N3—C9—C10—C11 = -117.6 (2) °]; the dihedral angle formed between the pyridyl rings = 72.24 (12) °. The pyridine-N atoms are each directed to the same side of the molecule.
Supramolecular tapes are formed comprising alternately orientated U-shaped N,N'-bis(3-pyridylmethyl)ethanediamide molecules and mediated by centrosymmetric eight-membered amide {···OCNH}2 synthons, Fig. 3; intramolecular N—H···O contacts are also noted, Table 1. This arrangement results in successive pairs of pyridine residues of the N,N'-bis(3-pyridylmethyl)oxamide molecules being orientated above and below the plane of the tape. The 2,2'-(disulfanediyl)dibenzoic acid molecules form carboxylic acid-OH···N-pyridine interactions so that a bridge is formed between a pyridine residue below the plane of the tape and one above the plane with two intervening N,N'-bis(3-pyridylmethyl)oxamide molecules. In summary, amide-mediated chains are gird by N,N'-bis(3-pyridylmethyl)oxamide molecules as highlighted in the end-on view shown in Fig. 4. The tapes are orientated along the a direction with the most prominent connection between them being of the type C—H···O, Fig. 5.