organic compounds
Tetraimidazolium piperazinediium bis(benzene-1,3,5-tricarboxylate) dihydrate
aThe State Key Laboratory Breeding Base of Basic Science of Stomatology, Hubei Province and School of Stomatology, Wuhan University 430072, People's Republic of China, and bCollege of Chemistry and Molecular Science, Wuhan University 430072, People's Republic of China
*Correspondence e-mail: lizhian2001@126.com
During the crystallization of the title compound, 4C3H5N2+·C4H12N2+·2C9H3O63−·2H2O, the acidic protons were transferred to the imidazole and piperazine N atoms, forming the final 4:1:2:2 hydrated mixed salt. The mean planes of the three carboxylate groups in the anion are twisted with respect to the the central benzene ring, making dihedral angles of 13.5 (1), 14.5 (1) and 16.9 (1)°. In the crystal, the component ions are linked into a three-dimensional network by a combination of intermolecular N—H⋯O, O—H⋯O and weak C—H⋯O hydrogen bonds. Further stabilization is provided by π-π stacking interactions with centroid–centroid distances of 3.393 (2) Å and weak C=O⋯π interactions [O–centroid = 3.363 (2) Å].
Related literature
For applications of multi-component piperazine compounds, see: Jacobs et al. (2009); Oswald et al. (2002); Wang & Jia (2008). For examples of compounds containing weak anion–π interactions, see: Schottel et al. (2008); Gao et al. (2009).
Experimental
Crystal data
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Refinement
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Data collection: SMART (Bruker, 2001); cell SAINT-Plus (Bruker, 2001); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009); software used to prepare material for publication: PLATON.
Supporting information
https://doi.org/10.1107/S1600536810041310/lh5148sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536810041310/lh5148Isup2.hkl
All the reagents and solvents were used as obtained without further purification. Piperazine hexahydrate (0.2 mmol, 38.8 mg), imidazole (0.2 mmol, 13.6 mg) and benzene 1,3,5-tricarboxylic acid (0.1 mmol, 42.0 mg) were dissolved in 95% methanol (20 ml). The resulting colorless solution was kept in air for two weeks. Colorless blocks of the title compound suitable for single-crystal X-ray
were grown by slow evaporation of the solution at the bottom of the vessel.H atoms bonded to C atoms were positioned geometrically with C–H = 0.93Å (aromatic) and 0.97 Å (methylene) and refined in a riding-model approximation [Uiso(H) = 1.2Ueq(C). H atoms bonded to N and O atoms were found in Fourier difference maps with N—H and were refined freely with Uiso(H)= 1.2Ueq(N) or 1.5Ueq(O).
Piperazine has been used in the manufacture of anthelmintic vermicide. In order to improve its pharmaceutical effect, piperazine has been made into tablets containing two or more components (Jacobs et al., 2009; Oswald et al., 2002; Wang & Jia, 2008). In this paper, we report a new four-component piperazine containing adduct and the
is presented herein.The formula unit of the title compound is shown in Fig. 1. The
is composed of two imidazolium cations, half a piperazinium cation, one benzene 1,3,5-tricarboxylate trianion and one water molecule. During the crystallization, the carboxylic acid protons of benzene-1,3,5-tricarboxylic acid were transferred to the imidazole and piperazine nitrogen atoms, forming the 4:1:2:2 organic adduct (imidazolium: piperazinium: benzene 1,3,5-tricarboxylate: water). Delocalization of charges on the the imidazolium and the benzene-1,3,5-tricarboxylate ions are reflected in the bond distances of C15—N3, C15—N4, C9—O5 and C9—O6. The mean planes of the three carboxylate groups in the anion twisted away from the central benzene ring with dihedral angles of 13.5 (1)°, 14.5 (1)° and 16.9 (1)°.In the crystal packing, the component ions are linked into a complex three-dimensional network by a combination of N—H···O, O—H···O and C—H···O hydrogen bonds (Table 1 and Figure 2). A PLATON (Spek, 2009) analysis shows that the π···π interaction [Cg1···Cg1(1 - x, 1 - y, 2 - z) = 3.393 (2) Å, dihedral angle = 0°, Cg1 is the centroid defined by atoms N3/N4/C13—C15] and a C=O···π interaction (C9···Cg2 = 3.472 (2) Å, O5···Cg2 = 3.363 (2)Å and C9=O5···Cg2 = 84.4 (2)°, Cg2 is th centroid defined by atoms N1/N2/C10—C12). These types of weak interactions have previously been studied (Gao et al., 2009, Schottel et al., 2008).
is further consolidated by aFor applications of multi-component piperazine compounds, see: Jacobs et al. (2009); Oswald et al. (2002); Wang & Jia (2008). For examples of compounds containing weak anion–π interactions, see: Schottel et al. (2008); Gao et al. (2009).
Data collection: SMART (Bruker, 2001); cell
SAINT-Plus (Bruker, 2001); data reduction: SAINT-Plus (Bruker, 2001); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009); software used to prepare material for publication: PLATON (Spek, 2009).Fig. 1. The formula unit of the title compound. The displacement ellipsoids are drawn at the 30% probability level. Hydrogen bonds are shown as dashed lines. Atoms marked with 'A' are at the position of (1 - x, 1 - y, 1 - z). | |
Fig. 2. Part of the title crystal structure, showing the three-dimensional network linked by N—H···O, O—H···O and C—H···O hydrogen bonds represented by dashed lines. For the sake of clarity, the H atoms not involved in the hydrogen-bonds pattern have been omitted. Color code: C, black; H, white; N, blue; O, red. |
4C3H5N2+·C4H12N2+·2C9H3O63−·2H2O | Z = 1 |
Mr = 814.78 | F(000) = 428 |
Triclinic, P1 | Dx = 1.474 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 7.1548 (4) Å | Cell parameters from 2102 reflections |
b = 9.9424 (5) Å | θ = 2.4–23.2° |
c = 13.3567 (7) Å | µ = 0.12 mm−1 |
α = 96.895 (1)° | T = 298 K |
β = 95.201 (1)° | Block, colorless |
γ = 101.439 (2)° | 0.20 × 0.13 × 0.10 mm |
V = 918.11 (8) Å3 |
Bruker SMART APEX CCD area-detector diffractometer | 3925 independent reflections |
Radiation source: fine focus sealed Siemens Mo tube | 2757 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.029 |
0.3° wide ω scans | θmax = 27.0°, θmin = 2.4° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −8→9 |
Tmin = 0.967, Tmax = 0.989 | k = −11→12 |
10341 measured reflections | l = −17→17 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.045 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.122 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.04 | w = 1/[σ2(Fo2) + (0.0631P)2 + 0.0369P] where P = (Fo2 + 2Fc2)/3 |
3925 reflections | (Δ/σ)max = 0.001 |
286 parameters | Δρmax = 0.31 e Å−3 |
0 restraints | Δρmin = −0.19 e Å−3 |
4C3H5N2+·C4H12N2+·2C9H3O63−·2H2O | γ = 101.439 (2)° |
Mr = 814.78 | V = 918.11 (8) Å3 |
Triclinic, P1 | Z = 1 |
a = 7.1548 (4) Å | Mo Kα radiation |
b = 9.9424 (5) Å | µ = 0.12 mm−1 |
c = 13.3567 (7) Å | T = 298 K |
α = 96.895 (1)° | 0.20 × 0.13 × 0.10 mm |
β = 95.201 (1)° |
Bruker SMART APEX CCD area-detector diffractometer | 3925 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 2757 reflections with I > 2σ(I) |
Tmin = 0.967, Tmax = 0.989 | Rint = 0.029 |
10341 measured reflections |
R[F2 > 2σ(F2)] = 0.045 | 0 restraints |
wR(F2) = 0.122 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.04 | Δρmax = 0.31 e Å−3 |
3925 reflections | Δρmin = −0.19 e Å−3 |
286 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.2128 (2) | −0.05764 (17) | 0.89657 (11) | 0.0263 (4) | |
C2 | 0.1004 (2) | −0.17749 (17) | 0.84080 (11) | 0.0263 (4) | |
H2 | 0.0409 | −0.2481 | 0.8743 | 0.032* | |
C3 | 0.0756 (2) | −0.19338 (17) | 0.73487 (11) | 0.0274 (4) | |
C4 | 0.1609 (2) | −0.08588 (18) | 0.68651 (12) | 0.0295 (4) | |
H4 | 0.1465 | −0.0964 | 0.6159 | 0.035* | |
C5 | 0.2676 (2) | 0.03761 (17) | 0.74101 (12) | 0.0267 (4) | |
C6 | 0.2947 (2) | 0.04896 (17) | 0.84640 (12) | 0.0274 (4) | |
H6 | 0.3694 | 0.1297 | 0.8838 | 0.033* | |
C7 | 0.2458 (2) | −0.04026 (18) | 1.01134 (12) | 0.0297 (4) | |
C8 | −0.0459 (2) | −0.32408 (19) | 0.67241 (12) | 0.0332 (4) | |
C9 | 0.3502 (2) | 0.15651 (19) | 0.68720 (13) | 0.0310 (4) | |
C10 | 0.2728 (3) | −0.0067 (2) | 1.32738 (13) | 0.0391 (5) | |
H10 | 0.3430 | 0.0790 | 1.3175 | 0.047* | |
C11 | 0.1114 (3) | −0.2190 (2) | 1.29964 (14) | 0.0432 (5) | |
H11 | 0.0505 | −0.3063 | 1.2661 | 0.052* | |
C12 | 0.1222 (3) | −0.1753 (2) | 1.39965 (13) | 0.0421 (5) | |
H12 | 0.0702 | −0.2261 | 1.4484 | 0.051* | |
C13 | 0.2479 (3) | 0.3752 (2) | 0.99158 (14) | 0.0401 (5) | |
H13 | 0.2379 | 0.2876 | 1.0111 | 0.048* | |
C14 | 0.2247 (3) | 0.4896 (2) | 1.04845 (14) | 0.0396 (5) | |
H14 | 0.1949 | 0.4961 | 1.1150 | 0.048* | |
C15 | 0.2920 (3) | 0.5449 (2) | 0.90127 (14) | 0.0400 (5) | |
H15 | 0.3176 | 0.5954 | 0.8480 | 0.048* | |
C16 | 0.3894 (3) | 0.4987 (2) | 0.58396 (13) | 0.0422 (5) | |
H16A | 0.3773 | 0.5318 | 0.6539 | 0.051* | |
H16B | 0.2710 | 0.4341 | 0.5557 | 0.051* | |
C17 | 0.5803 (3) | 0.3814 (2) | 0.47501 (14) | 0.0462 (5) | |
H17A | 0.4688 | 0.3126 | 0.4428 | 0.055* | |
H17B | 0.6910 | 0.3387 | 0.4747 | 0.055* | |
N1 | 0.2057 (2) | −0.11215 (17) | 1.25638 (11) | 0.0396 (4) | |
H1A | 0.217 (3) | −0.111 (2) | 1.1923 (16) | 0.048* | |
N2 | 0.2245 (2) | −0.04171 (17) | 1.41557 (11) | 0.0389 (4) | |
H2A | 0.265 (3) | 0.014 (2) | 1.4745 (16) | 0.047* | |
N3 | 0.2891 (2) | 0.41179 (16) | 0.89917 (12) | 0.0374 (4) | |
H3A | 0.320 (3) | 0.355 (2) | 0.8468 (14) | 0.045* | |
N4 | 0.2528 (2) | 0.59528 (17) | 0.99092 (11) | 0.0361 (4) | |
H4A | 0.240 (3) | 0.686 (2) | 1.0107 (14) | 0.043* | |
N5 | 0.5516 (2) | 0.42669 (17) | 0.58090 (11) | 0.0388 (4) | |
H5A | 0.667 (3) | 0.486 (2) | 0.6204 (14) | 0.047* | |
H5B | 0.520 (3) | 0.350 (2) | 0.6120 (15) | 0.047* | |
O1 | 0.3047 (2) | 0.07841 (13) | 1.05718 (9) | 0.0488 (4) | |
O2 | 0.21058 (18) | −0.14867 (12) | 1.05409 (8) | 0.0379 (3) | |
O3 | −0.15144 (18) | −0.40803 (13) | 0.71833 (9) | 0.0450 (4) | |
O4 | −0.0363 (2) | −0.34118 (16) | 0.58017 (9) | 0.0617 (5) | |
O5 | 0.3573 (2) | 0.13542 (13) | 0.59351 (9) | 0.0436 (3) | |
O6 | 0.41142 (19) | 0.27435 (12) | 0.73950 (9) | 0.0415 (3) | |
O7 | 0.4407 (2) | 0.26393 (16) | 1.22724 (10) | 0.0498 (4) | |
H7A | 0.407 (3) | 0.201 (3) | 1.1749 (19) | 0.075* | |
H7B | 0.342 (3) | 0.306 (3) | 1.2364 (18) | 0.075* |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0326 (9) | 0.0259 (9) | 0.0207 (8) | 0.0069 (7) | 0.0028 (6) | 0.0045 (6) |
C2 | 0.0329 (9) | 0.0236 (9) | 0.0223 (8) | 0.0025 (7) | 0.0046 (6) | 0.0073 (6) |
C3 | 0.0293 (8) | 0.0277 (10) | 0.0243 (8) | 0.0042 (7) | 0.0023 (6) | 0.0038 (7) |
C4 | 0.0368 (9) | 0.0330 (10) | 0.0186 (7) | 0.0064 (8) | 0.0040 (6) | 0.0047 (7) |
C5 | 0.0301 (9) | 0.0256 (9) | 0.0265 (8) | 0.0071 (7) | 0.0068 (6) | 0.0069 (7) |
C6 | 0.0330 (9) | 0.0218 (9) | 0.0261 (8) | 0.0036 (7) | 0.0025 (7) | 0.0027 (7) |
C7 | 0.0397 (10) | 0.0282 (10) | 0.0213 (8) | 0.0080 (8) | 0.0034 (7) | 0.0026 (7) |
C8 | 0.0360 (9) | 0.0336 (11) | 0.0256 (8) | 0.0009 (8) | −0.0006 (7) | 0.0013 (7) |
C9 | 0.0357 (9) | 0.0301 (10) | 0.0307 (9) | 0.0095 (8) | 0.0088 (7) | 0.0103 (7) |
C10 | 0.0498 (11) | 0.0398 (12) | 0.0308 (9) | 0.0124 (9) | 0.0099 (8) | 0.0090 (8) |
C11 | 0.0501 (11) | 0.0425 (12) | 0.0332 (10) | 0.0025 (9) | 0.0019 (8) | 0.0040 (9) |
C12 | 0.0477 (11) | 0.0478 (13) | 0.0322 (10) | 0.0064 (10) | 0.0094 (8) | 0.0140 (9) |
C13 | 0.0473 (11) | 0.0327 (11) | 0.0427 (10) | 0.0080 (9) | 0.0089 (8) | 0.0128 (9) |
C14 | 0.0465 (11) | 0.0394 (12) | 0.0352 (10) | 0.0105 (9) | 0.0087 (8) | 0.0086 (8) |
C15 | 0.0500 (11) | 0.0342 (12) | 0.0376 (10) | 0.0081 (9) | 0.0112 (8) | 0.0097 (8) |
C16 | 0.0441 (11) | 0.0506 (13) | 0.0269 (9) | −0.0014 (9) | 0.0040 (8) | 0.0040 (8) |
C17 | 0.0566 (12) | 0.0361 (12) | 0.0432 (11) | 0.0085 (10) | −0.0001 (9) | 0.0013 (9) |
N1 | 0.0508 (10) | 0.0500 (11) | 0.0216 (7) | 0.0155 (8) | 0.0074 (7) | 0.0090 (7) |
N2 | 0.0487 (9) | 0.0454 (11) | 0.0233 (7) | 0.0121 (8) | 0.0055 (7) | 0.0035 (7) |
N3 | 0.0446 (9) | 0.0289 (9) | 0.0390 (9) | 0.0081 (7) | 0.0091 (7) | 0.0020 (7) |
N4 | 0.0434 (9) | 0.0264 (9) | 0.0391 (8) | 0.0086 (7) | 0.0076 (7) | 0.0037 (7) |
N5 | 0.0455 (10) | 0.0309 (9) | 0.0344 (8) | −0.0067 (8) | −0.0049 (7) | 0.0143 (7) |
O1 | 0.0874 (11) | 0.0259 (7) | 0.0268 (6) | 0.0060 (7) | −0.0025 (6) | −0.0047 (5) |
O2 | 0.0642 (9) | 0.0285 (7) | 0.0213 (6) | 0.0072 (6) | 0.0072 (5) | 0.0076 (5) |
O3 | 0.0521 (8) | 0.0360 (8) | 0.0371 (7) | −0.0124 (6) | 0.0057 (6) | 0.0016 (6) |
O4 | 0.0783 (11) | 0.0614 (10) | 0.0263 (7) | −0.0223 (8) | 0.0034 (7) | −0.0059 (6) |
O5 | 0.0648 (9) | 0.0375 (8) | 0.0297 (7) | 0.0058 (6) | 0.0163 (6) | 0.0107 (5) |
O6 | 0.0592 (8) | 0.0252 (7) | 0.0393 (7) | 0.0009 (6) | 0.0146 (6) | 0.0079 (6) |
O7 | 0.0637 (10) | 0.0433 (9) | 0.0349 (7) | −0.0004 (7) | 0.0066 (7) | −0.0058 (6) |
C1—C6 | 1.382 (2) | C12—H12 | 0.9300 |
C1—C2 | 1.385 (2) | C13—C14 | 1.337 (3) |
C1—C7 | 1.513 (2) | C13—N3 | 1.369 (2) |
C2—C3 | 1.396 (2) | C13—H13 | 0.9300 |
C2—H2 | 0.9300 | C14—N4 | 1.369 (2) |
C3—C4 | 1.382 (2) | C14—H14 | 0.9300 |
C3—C8 | 1.517 (2) | C15—N3 | 1.317 (2) |
C4—C5 | 1.390 (2) | C15—N4 | 1.318 (2) |
C4—H4 | 0.9300 | C15—H15 | 0.9300 |
C5—C6 | 1.391 (2) | C16—N5 | 1.481 (3) |
C5—C9 | 1.506 (2) | C16—C17i | 1.497 (3) |
C6—H6 | 0.9300 | C16—H16A | 0.9700 |
C7—O1 | 1.236 (2) | C16—H16B | 0.9700 |
C7—O2 | 1.272 (2) | C17—N5 | 1.477 (2) |
C8—O4 | 1.233 (2) | C17—C16i | 1.497 (3) |
C8—O3 | 1.265 (2) | C17—H17A | 0.9700 |
C9—O5 | 1.251 (2) | C17—H17B | 0.9700 |
C9—O6 | 1.264 (2) | N1—H1A | 0.87 (2) |
C10—N1 | 1.307 (2) | N2—H2A | 0.90 (2) |
C10—N2 | 1.324 (2) | N3—H3A | 0.915 (19) |
C10—H10 | 0.9300 | N4—H4A | 0.93 (2) |
C11—C12 | 1.345 (3) | N5—H5A | 0.98 (2) |
C11—N1 | 1.361 (2) | N5—H5B | 0.91 (2) |
C11—H11 | 0.9300 | O7—H7A | 0.86 (3) |
C12—N2 | 1.365 (2) | O7—H7B | 0.90 (3) |
C6—C1—C2 | 119.32 (14) | N3—C13—H13 | 126.6 |
C6—C1—C7 | 119.29 (14) | C13—C14—N4 | 107.51 (16) |
C2—C1—C7 | 121.39 (15) | C13—C14—H14 | 126.2 |
C1—C2—C3 | 120.66 (15) | N4—C14—H14 | 126.2 |
C1—C2—H2 | 119.7 | N3—C15—N4 | 109.13 (17) |
C3—C2—H2 | 119.7 | N3—C15—H15 | 125.4 |
C4—C3—C2 | 118.85 (14) | N4—C15—H15 | 125.4 |
C4—C3—C8 | 119.66 (14) | N5—C16—C17i | 110.90 (16) |
C2—C3—C8 | 121.48 (15) | N5—C16—H16A | 109.5 |
C3—C4—C5 | 121.49 (14) | C17i—C16—H16A | 109.5 |
C3—C4—H4 | 119.3 | N5—C16—H16B | 109.5 |
C5—C4—H4 | 119.3 | C17i—C16—H16B | 109.5 |
C4—C5—C6 | 118.38 (15) | H16A—C16—H16B | 108.0 |
C4—C5—C9 | 120.74 (14) | N5—C17—C16i | 111.07 (16) |
C6—C5—C9 | 120.88 (15) | N5—C17—H17A | 109.4 |
C1—C6—C5 | 121.22 (15) | C16i—C17—H17A | 109.4 |
C1—C6—H6 | 119.4 | N5—C17—H17B | 109.4 |
C5—C6—H6 | 119.4 | C16i—C17—H17B | 109.4 |
O1—C7—O2 | 124.44 (15) | H17A—C17—H17B | 108.0 |
O1—C7—C1 | 117.75 (16) | C10—N1—C11 | 108.59 (15) |
O2—C7—C1 | 117.81 (14) | C10—N1—H1A | 124.3 (14) |
O4—C8—O3 | 124.28 (16) | C11—N1—H1A | 127.1 (14) |
O4—C8—C3 | 117.93 (16) | C10—N2—C12 | 108.49 (16) |
O3—C8—C3 | 117.79 (14) | C10—N2—H2A | 122.6 (13) |
O5—C9—O6 | 122.58 (16) | C12—N2—H2A | 128.7 (13) |
O5—C9—C5 | 119.37 (16) | C15—N3—C13 | 108.45 (16) |
O6—C9—C5 | 118.05 (14) | C15—N3—H3A | 125.6 (13) |
N1—C10—N2 | 108.95 (18) | C13—N3—H3A | 125.7 (12) |
N1—C10—H10 | 125.5 | C15—N4—C14 | 108.03 (16) |
N2—C10—H10 | 125.5 | C15—N4—H4A | 126.1 (12) |
C12—C11—N1 | 107.52 (17) | C14—N4—H4A | 125.8 (12) |
C12—C11—H11 | 126.2 | C17—N5—C16 | 110.82 (14) |
N1—C11—H11 | 126.2 | C17—N5—H5A | 113.0 (11) |
C11—C12—N2 | 106.45 (17) | C16—N5—H5A | 110.0 (11) |
C11—C12—H12 | 126.8 | C17—N5—H5B | 108.4 (13) |
N2—C12—H12 | 126.8 | C16—N5—H5B | 107.1 (13) |
C14—C13—N3 | 106.88 (17) | H5A—N5—H5B | 107.3 (16) |
C14—C13—H13 | 126.6 | H7A—O7—H7B | 108 (2) |
C6—C1—C2—C3 | 2.5 (2) | C4—C3—C8—O3 | −166.35 (16) |
C7—C1—C2—C3 | −178.26 (15) | C2—C3—C8—O3 | 12.2 (3) |
C1—C2—C3—C4 | −1.7 (3) | C4—C5—C9—O5 | −14.7 (3) |
C1—C2—C3—C8 | 179.66 (15) | C6—C5—C9—O5 | 165.86 (16) |
C2—C3—C4—C5 | −1.0 (3) | C4—C5—C9—O6 | 165.85 (16) |
C8—C3—C4—C5 | 177.65 (15) | C6—C5—C9—O6 | −13.6 (2) |
C3—C4—C5—C6 | 2.9 (3) | N1—C11—C12—N2 | −0.3 (2) |
C3—C4—C5—C9 | −176.58 (15) | N3—C13—C14—N4 | −0.3 (2) |
C2—C1—C6—C5 | −0.5 (2) | N2—C10—N1—C11 | −0.1 (2) |
C7—C1—C6—C5 | −179.78 (15) | C12—C11—N1—C10 | 0.3 (2) |
C4—C5—C6—C1 | −2.1 (2) | N1—C10—N2—C12 | 0.0 (2) |
C9—C5—C6—C1 | 177.32 (15) | C11—C12—N2—C10 | 0.2 (2) |
C6—C1—C7—O1 | 17.1 (2) | N4—C15—N3—C13 | −0.5 (2) |
C2—C1—C7—O1 | −162.20 (16) | C14—C13—N3—C15 | 0.5 (2) |
C6—C1—C7—O2 | −163.16 (15) | N3—C15—N4—C14 | 0.3 (2) |
C2—C1—C7—O2 | 17.6 (2) | C13—C14—N4—C15 | 0.0 (2) |
C4—C3—C8—O4 | 13.2 (3) | C16i—C17—N5—C16 | 56.2 (2) |
C2—C3—C8—O4 | −168.22 (17) | C17i—C16—N5—C17 | −56.1 (2) |
Symmetry code: (i) −x+1, −y+1, −z+1. |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···O2 | 0.87 (2) | 1.83 (2) | 2.6870 (18) | 166.9 (19) |
N2—H2A···O5ii | 0.90 (2) | 1.86 (2) | 2.7522 (19) | 177.4 (19) |
N3—H3A···O6 | 0.915 (19) | 1.80 (2) | 2.701 (2) | 168.8 (18) |
N4—H4A···O2iii | 0.93 (2) | 1.74 (2) | 2.668 (2) | 176.6 (18) |
N5—H5A···O3iv | 0.98 (2) | 1.83 (2) | 2.7872 (19) | 166.7 (17) |
N5—H5A···O4iv | 0.98 (2) | 2.60 (2) | 3.366 (2) | 135.7 (14) |
N5—H5B···O5 | 0.91 (2) | 2.19 (2) | 2.985 (2) | 145.2 (16) |
N5—H5B···O6 | 0.91 (2) | 2.10 (2) | 2.888 (2) | 145.1 (18) |
O7—H7A···O1 | 0.86 (3) | 1.86 (3) | 2.7184 (17) | 171 (2) |
O7—H7B···O3v | 0.90 (3) | 1.95 (3) | 2.840 (2) | 169 (2) |
C10—H10···O7 | 0.93 | 2.35 | 3.217 (3) | 156 |
C12—H12···O4ii | 0.93 | 2.32 | 3.244 (2) | 175 |
C13—H13···O1 | 0.93 | 2.36 | 3.267 (2) | 164 |
C14—H14···O3v | 0.93 | 2.51 | 3.372 (2) | 154 |
C15—H15···O7vi | 0.93 | 2.38 | 3.186 (2) | 145 |
C16—H16B···O4vii | 0.97 | 2.32 | 3.200 (2) | 150 |
C16—H16A···O7vi | 0.97 | 2.48 | 3.207 (2) | 132 |
Symmetry codes: (ii) x, y, z+1; (iii) x, y+1, z; (iv) x+1, y+1, z; (v) −x, −y, −z+2; (vi) −x+1, −y+1, −z+2; (vii) −x, −y, −z+1. |
Experimental details
Crystal data | |
Chemical formula | 4C3H5N2+·C4H12N2+·2C9H3O63−·2H2O |
Mr | 814.78 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 298 |
a, b, c (Å) | 7.1548 (4), 9.9424 (5), 13.3567 (7) |
α, β, γ (°) | 96.895 (1), 95.201 (1), 101.439 (2) |
V (Å3) | 918.11 (8) |
Z | 1 |
Radiation type | Mo Kα |
µ (mm−1) | 0.12 |
Crystal size (mm) | 0.20 × 0.13 × 0.10 |
Data collection | |
Diffractometer | Bruker SMART APEX CCD area-detector |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.967, 0.989 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 10341, 3925, 2757 |
Rint | 0.029 |
(sin θ/λ)max (Å−1) | 0.639 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.045, 0.122, 1.04 |
No. of reflections | 3925 |
No. of parameters | 286 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.31, −0.19 |
Computer programs: SMART (Bruker, 2001), SAINT-Plus (Bruker, 2001), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009), PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···O2 | 0.87 (2) | 1.83 (2) | 2.6870 (18) | 166.9 (19) |
N2—H2A···O5i | 0.90 (2) | 1.86 (2) | 2.7522 (19) | 177.4 (19) |
N3—H3A···O6 | 0.915 (19) | 1.80 (2) | 2.701 (2) | 168.8 (18) |
N4—H4A···O2ii | 0.93 (2) | 1.74 (2) | 2.668 (2) | 176.6 (18) |
N5—H5A···O3iii | 0.98 (2) | 1.83 (2) | 2.7872 (19) | 166.7 (17) |
N5—H5A···O4iii | 0.98 (2) | 2.60 (2) | 3.366 (2) | 135.7 (14) |
N5—H5B···O5 | 0.91 (2) | 2.19 (2) | 2.985 (2) | 145.2 (16) |
N5—H5B···O6 | 0.91 (2) | 2.10 (2) | 2.888 (2) | 145.1 (18) |
O7—H7A···O1 | 0.86 (3) | 1.86 (3) | 2.7184 (17) | 171 (2) |
O7—H7B···O3iv | 0.90 (3) | 1.95 (3) | 2.840 (2) | 169 (2) |
C10—H10···O7 | 0.93 | 2.35 | 3.217 (3) | 155.9 |
C12—H12···O4i | 0.93 | 2.32 | 3.244 (2) | 174.8 |
C13—H13···O1 | 0.93 | 2.36 | 3.267 (2) | 164.1 |
C14—H14···O3iv | 0.93 | 2.51 | 3.372 (2) | 154.0 |
C15—H15···O7v | 0.93 | 2.38 | 3.186 (2) | 145.4 |
C16—H16B···O4vi | 0.97 | 2.32 | 3.200 (2) | 150.1 |
C16—H16A···O7v | 0.97 | 2.48 | 3.207 (2) | 131.7 |
Symmetry codes: (i) x, y, z+1; (ii) x, y+1, z; (iii) x+1, y+1, z; (iv) −x, −y, −z+2; (v) −x+1, −y+1, −z+2; (vi) −x, −y, −z+1. |
Acknowledgements
We thank Dr Gui-Huan Du for helpful discussions about the structure.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Piperazine has been used in the manufacture of anthelmintic vermicide. In order to improve its pharmaceutical effect, piperazine has been made into tablets containing two or more components (Jacobs et al., 2009; Oswald et al., 2002; Wang & Jia, 2008). In this paper, we report a new four-component piperazine containing adduct and the crystal structure is presented herein.
The formula unit of the title compound is shown in Fig. 1. The asymmetric unit is composed of two imidazolium cations, half a piperazinium cation, one benzene 1,3,5-tricarboxylate trianion and one water molecule. During the crystallization, the carboxylic acid protons of benzene-1,3,5-tricarboxylic acid were transferred to the imidazole and piperazine nitrogen atoms, forming the 4:1:2:2 organic adduct (imidazolium: piperazinium: benzene 1,3,5-tricarboxylate: water). Delocalization of charges on the the imidazolium and the benzene-1,3,5-tricarboxylate ions are reflected in the bond distances of C15—N3, C15—N4, C9—O5 and C9—O6. The mean planes of the three carboxylate groups in the anion twisted away from the central benzene ring with dihedral angles of 13.5 (1)°, 14.5 (1)° and 16.9 (1)°.
In the crystal packing, the component ions are linked into a complex three-dimensional network by a combination of N—H···O, O—H···O and C—H···O hydrogen bonds (Table 1 and Figure 2). A PLATON (Spek, 2009) analysis shows that the crystal structure is further consolidated by a π···π interaction [Cg1···Cg1(1 - x, 1 - y, 2 - z) = 3.393 (2) Å, dihedral angle = 0°, Cg1 is the centroid defined by atoms N3/N4/C13—C15] and a C=O···π interaction (C9···Cg2 = 3.472 (2) Å, O5···Cg2 = 3.363 (2)Å and C9=O5···Cg2 = 84.4 (2)°, Cg2 is th centroid defined by atoms N1/N2/C10—C12). These types of weak interactions have previously been studied (Gao et al., 2009, Schottel et al., 2008).