organic compounds
2-[(4-Methoxybenzyl)iminomethyl]phenol
aResearch Centre of Bioorganic Chemistry, Department of Chemistry, Faculty of Science, Chulalongkorn University, Bangkok, 10330, Thailand
*Correspondence e-mail: nongnuj.j@chula.ac.th
In the title Schiff base compound, C15H15NO2, prepared from 4-methoxybenzylamine and salicylaldehyde, an intramolecular O—H⋯N hydrogen bonds influences the molecular conformation; the two aromatic rings form a dihedral angle of 73.5 (1)°. In the crystal, weak intermolecular C—H⋯O interactions link the molecules into chains propagating in [010].
Related literature
For background to Schiff base ligands and their biological activity, see: Adsule et al. (2006); Karthikeyan et al. (2006). For related structures, see: Phurat et al. (2010); Tariq et al. (2010); Khalaji & Simpson (2009). For the graph-set analysis of hydrogen-bond patterns, see: Bernstein et al. (1995). For details of the synthesis, see: Phurat et al. (2010); Kannappan et al. (2005).
Experimental
Crystal data
|
Data collection
|
Refinement
|
Data collection: APEX2 (Bruker, 2008); cell SAINT (Bruker, 2008); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: publCIF (Westrip, 2010).
Supporting information
https://doi.org/10.1107/S1600536810048282/cv2800sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536810048282/cv2800Isup2.hkl
The title compound was prepared according to the method reported in the literature (Kannappan et al., 2005; Phurat et al., 2010). 4-Methoxybenzylamine (2.50 ml.2.63 g, 0.02 mol) was added to a stirred ethanol solution of salicylaldehyde (2.50 ml, 2.86 g, 0.02 mol). The reaction mixture was stirred at reflux for 2 h and then the mixture was allowed to stand at room temperature for 1 week to give yellow cystals suitable for X-ray diffraction analysis.
H-atoms were geometrically positioned (C—H 0.93-0.97 Å, O—H 0.82 Å) and refined using a riding model, with Uiso= 1.2-1.5 Ueq of the parent atom. The
could not be determined and therefore 1,086 Friedel opposites were merged.Schiff base complexes have gained importance from physiological and pharmacological activities point of view (Adsule et al., 2006; Karthikeyan et al., 2006). As a part of our research focused on the area of transition metal complex-based anticancer agents, the title compound (I) has been prepared as a ligand by Schiff base reaction between 4-methoxybenzylamine and salicylaldehyde.
The molecule of (I) (Fig. 1) adopts a V-shape structure. The dihedral angle between the methoxybenzene ring and 2-methyliminophenol moiety is 73.5 (1)°. The 2-methyliminophenol (C1 to C7, N1 and O1) moiety is nearly planar (r.m.s. deviation = 0.021 Å). The methoxybenzene and 2-methyliminophenol groups are located on the opposite side of the C=N bond, showing an E configuration. The bond lengths and angles in (I) are normal and comparable with those observed in the related compounds (Phurat et al., 2010; Tariq et al., 2010; Khalaji & Simpson, 2009). Intramolecular O—H···N hydrogen bond (Table 1) generates a S(6) ring (Bernstein et al., 1995).
In the
weak intermolecular C—H···O interactions (Table 1) link the molecules into chains propagated in direction [010].For background to Schiff base ligands and their biological activity, see: Adsule et al. (2006); Karthikeyan et al. (2006). For related structures, see: Phurat et al. (2010); Tariq et al. (2010); Khalaji & Simpson (2009). For the graph-set analysis of hydrogen-bond patterns, see: Bernstein et al. (1995). For details of the synthesis, see: Phurat et al. (2010); Kannappan et al. (2005).
Data collection: APEX2 (Bruker, 2008); cell
SAINT (Bruker, 2008); data reduction: SAINT (Bruker, 2008); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: publCIF (Westrip, 2010).Fig. 1. The molecular structure of (I) with displacement ellipsoids for the non-hydrogen atoms drawn at the 30% probability level. Hydrogen bond is shown as a dashed line. |
C15H15NO2 | F(000) = 512 |
Mr = 241.28 | Dx = 1.228 Mg m−3 |
Orthorhombic, P212121 | Mo Kα radiation, λ = 0.71073 Å |
a = 5.7190 (8) Å | µ = 0.08 mm−1 |
b = 12.7229 (19) Å | T = 293 K |
c = 17.936 (3) Å | Needle, yellow |
V = 1305.0 (3) Å3 | 0.3 × 0.18 × 0.04 mm |
Z = 4 |
Bruker SMART APEXII CCD area-detector diffractometer | 1177 reflections with I > 2σ(I) |
Radiation source: Mo Kα | Rint = 0.040 |
Graphite monochromator | θmax = 26.5°, θmin = 2.0° |
φ and ω scans | h = −7→7 |
5776 measured reflections | k = −15→14 |
1573 independent reflections | l = −20→22 |
Refinement on F2 | 0 restraints |
Least-squares matrix: full | H-atom parameters constrained |
R[F2 > 2σ(F2)] = 0.051 | w = 1/[σ2(Fo2) + (0.1P)2] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.162 | (Δ/σ)max < 0.001 |
S = 1.13 | Δρmax = 0.15 e Å−3 |
1573 reflections | Δρmin = −0.16 e Å−3 |
164 parameters |
C15H15NO2 | V = 1305.0 (3) Å3 |
Mr = 241.28 | Z = 4 |
Orthorhombic, P212121 | Mo Kα radiation |
a = 5.7190 (8) Å | µ = 0.08 mm−1 |
b = 12.7229 (19) Å | T = 293 K |
c = 17.936 (3) Å | 0.3 × 0.18 × 0.04 mm |
Bruker SMART APEXII CCD area-detector diffractometer | 1177 reflections with I > 2σ(I) |
5776 measured reflections | Rint = 0.040 |
1573 independent reflections |
R[F2 > 2σ(F2)] = 0.051 | 0 restraints |
wR(F2) = 0.162 | H-atom parameters constrained |
S = 1.13 | Δρmax = 0.15 e Å−3 |
1573 reflections | Δρmin = −0.16 e Å−3 |
164 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.7854 (7) | 0.1595 (3) | 0.54878 (17) | 0.0795 (9) | |
H1 | 0.642 | 0.183 | 0.5308 | 0.095* | |
C2 | 0.8661 (10) | 0.0614 (3) | 0.5283 (2) | 0.1029 (14) | |
H2 | 0.7787 | 0.0191 | 0.4965 | 0.123* | |
C3 | 1.0749 (9) | 0.0274 (3) | 0.5552 (3) | 0.1095 (15) | |
H3 | 1.1283 | −0.039 | 0.5417 | 0.131* | |
C4 | 1.2087 (7) | 0.0879 (3) | 0.6015 (2) | 0.0909 (11) | |
H4 | 1.3499 | 0.0627 | 0.6199 | 0.109* | |
C5 | 1.1300 (5) | 0.1875 (2) | 0.62042 (17) | 0.0668 (8) | |
C6 | 0.9144 (5) | 0.2235 (2) | 0.59563 (14) | 0.0570 (6) | |
C7 | 0.8246 (5) | 0.3261 (2) | 0.61737 (18) | 0.0675 (7) | |
H7 | 0.6806 | 0.3482 | 0.599 | 0.081* | |
C8 | 0.8369 (7) | 0.4881 (3) | 0.6807 (3) | 0.1079 (14) | |
H8A | 0.7999 | 0.4889 | 0.7335 | 0.129* | |
H8B | 0.6929 | 0.4989 | 0.6532 | 0.129* | |
C9 | 1.0065 (6) | 0.5755 (3) | 0.6632 (2) | 0.0814 (10) | |
C10 | 1.1673 (7) | 0.6086 (3) | 0.71468 (18) | 0.0783 (9) | |
H10 | 1.1688 | 0.5775 | 0.7616 | 0.094* | |
C11 | 1.3269 (6) | 0.6865 (2) | 0.69908 (16) | 0.0695 (8) | |
H11 | 1.4343 | 0.7077 | 0.735 | 0.083* | |
C12 | 1.3254 (6) | 0.7330 (2) | 0.62925 (15) | 0.0642 (7) | |
C13 | 1.1673 (8) | 0.7010 (3) | 0.57680 (19) | 0.0836 (10) | |
H13 | 1.1667 | 0.7319 | 0.5298 | 0.1* | |
C14 | 1.0094 (7) | 0.6231 (3) | 0.5935 (2) | 0.0892 (11) | |
H14 | 0.9025 | 0.6018 | 0.5575 | 0.107* | |
C15 | 1.6382 (7) | 0.8487 (3) | 0.6610 (2) | 0.0891 (10) | |
H15A | 1.73 | 0.904 | 0.6394 | 0.134* | |
H15B | 1.7389 | 0.7919 | 0.6754 | 0.134* | |
H15C | 1.5573 | 0.8749 | 0.704 | 0.134* | |
N1 | 0.9379 (4) | 0.3862 (2) | 0.66067 (15) | 0.0790 (7) | |
O1 | 1.2662 (4) | 0.2479 (2) | 0.66466 (15) | 0.0979 (8) | |
H1A | 1.1921 | 0.2997 | 0.6782 | 0.147* | |
O2 | 1.4738 (5) | 0.81229 (18) | 0.60808 (11) | 0.0847 (7) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.082 (2) | 0.070 (2) | 0.0865 (18) | −0.0248 (18) | −0.0068 (17) | 0.0110 (16) |
C2 | 0.129 (4) | 0.069 (2) | 0.110 (3) | −0.037 (3) | 0.019 (3) | −0.015 (2) |
C3 | 0.138 (4) | 0.055 (2) | 0.135 (3) | −0.009 (3) | 0.063 (3) | −0.006 (2) |
C4 | 0.079 (2) | 0.075 (2) | 0.119 (3) | 0.015 (2) | 0.026 (2) | 0.031 (2) |
C5 | 0.0600 (15) | 0.0640 (17) | 0.0764 (16) | −0.0006 (15) | 0.0024 (14) | 0.0127 (14) |
C6 | 0.0554 (14) | 0.0459 (14) | 0.0696 (14) | −0.0079 (12) | 0.0013 (12) | 0.0121 (12) |
C7 | 0.0515 (13) | 0.0542 (16) | 0.0968 (18) | −0.0058 (14) | 0.0057 (14) | 0.0154 (15) |
C8 | 0.091 (2) | 0.068 (2) | 0.165 (3) | −0.010 (2) | 0.043 (3) | −0.030 (2) |
C9 | 0.081 (2) | 0.0504 (17) | 0.113 (2) | 0.0010 (16) | 0.026 (2) | −0.0255 (18) |
C10 | 0.099 (2) | 0.0543 (16) | 0.0814 (18) | 0.0031 (19) | 0.0169 (18) | −0.0043 (15) |
C11 | 0.0839 (19) | 0.0552 (16) | 0.0694 (16) | 0.0009 (16) | −0.0002 (15) | −0.0039 (13) |
C12 | 0.0789 (18) | 0.0457 (14) | 0.0680 (14) | 0.0075 (16) | 0.0052 (14) | −0.0091 (12) |
C13 | 0.108 (3) | 0.072 (2) | 0.0708 (16) | 0.004 (2) | −0.0044 (18) | −0.0100 (15) |
C14 | 0.095 (2) | 0.073 (2) | 0.099 (2) | 0.001 (2) | −0.008 (2) | −0.030 (2) |
C15 | 0.097 (2) | 0.070 (2) | 0.100 (2) | −0.015 (2) | 0.008 (2) | −0.0039 (17) |
N1 | 0.0726 (15) | 0.0577 (15) | 0.1068 (17) | −0.0101 (14) | 0.0126 (15) | −0.0071 (14) |
O1 | 0.0699 (13) | 0.111 (2) | 0.1132 (17) | 0.0012 (16) | −0.0258 (14) | 0.0017 (16) |
O2 | 0.1129 (18) | 0.0647 (13) | 0.0765 (12) | −0.0104 (13) | 0.0065 (13) | 0.0056 (11) |
C1—C2 | 1.381 (6) | C8—H8B | 0.97 |
C1—C6 | 1.383 (4) | C9—C10 | 1.369 (5) |
C1—H1 | 0.93 | C9—C14 | 1.390 (5) |
C2—C3 | 1.359 (7) | C10—C11 | 1.376 (5) |
C2—H2 | 0.93 | C10—H10 | 0.93 |
C3—C4 | 1.366 (6) | C11—C12 | 1.385 (4) |
C3—H3 | 0.93 | C11—H11 | 0.93 |
C4—C5 | 1.387 (5) | C12—C13 | 1.367 (5) |
C4—H4 | 0.93 | C12—O2 | 1.372 (4) |
C5—O1 | 1.352 (4) | C13—C14 | 1.374 (5) |
C5—C6 | 1.389 (4) | C13—H13 | 0.93 |
C6—C7 | 1.456 (4) | C14—H14 | 0.93 |
C7—N1 | 1.268 (4) | C15—O2 | 1.413 (4) |
C7—H7 | 0.93 | C15—H15A | 0.96 |
C8—N1 | 1.464 (4) | C15—H15B | 0.96 |
C8—C9 | 1.509 (5) | C15—H15C | 0.96 |
C8—H8A | 0.97 | O1—H1A | 0.82 |
C2—C1—C6 | 121.0 (4) | C10—C9—C14 | 117.7 (3) |
C2—C1—H1 | 119.5 | C10—C9—C8 | 121.2 (4) |
C6—C1—H1 | 119.5 | C14—C9—C8 | 121.0 (4) |
C3—C2—C1 | 119.1 (4) | C9—C10—C11 | 122.0 (3) |
C3—C2—H2 | 120.4 | C9—C10—H10 | 119 |
C1—C2—H2 | 120.4 | C11—C10—H10 | 119 |
C2—C3—C4 | 121.9 (4) | C10—C11—C12 | 119.2 (3) |
C2—C3—H3 | 119 | C10—C11—H11 | 120.4 |
C4—C3—H3 | 119 | C12—C11—H11 | 120.4 |
C3—C4—C5 | 118.8 (4) | C13—C12—O2 | 116.0 (3) |
C3—C4—H4 | 120.6 | C13—C12—C11 | 119.9 (3) |
C5—C4—H4 | 120.6 | O2—C12—C11 | 124.1 (3) |
O1—C5—C4 | 118.5 (3) | C12—C13—C14 | 120.0 (3) |
O1—C5—C6 | 120.8 (3) | C12—C13—H13 | 120 |
C4—C5—C6 | 120.7 (3) | C14—C13—H13 | 120 |
C1—C6—C5 | 118.3 (3) | C13—C14—C9 | 121.2 (3) |
C1—C6—C7 | 120.1 (3) | C13—C14—H14 | 119.4 |
C5—C6—C7 | 121.6 (3) | C9—C14—H14 | 119.4 |
N1—C7—C6 | 121.6 (3) | O2—C15—H15A | 109.5 |
N1—C7—H7 | 119.2 | O2—C15—H15B | 109.5 |
C6—C7—H7 | 119.2 | H15A—C15—H15B | 109.5 |
N1—C8—C9 | 110.4 (3) | O2—C15—H15C | 109.5 |
N1—C8—H8A | 109.6 | H15A—C15—H15C | 109.5 |
C9—C8—H8A | 109.6 | H15B—C15—H15C | 109.5 |
N1—C8—H8B | 109.6 | C7—N1—C8 | 118.9 (3) |
C9—C8—H8B | 109.6 | C5—O1—H1A | 109.5 |
H8A—C8—H8B | 108.1 | C12—O2—C15 | 117.8 (2) |
C6—C1—C2—C3 | 0.5 (5) | C14—C9—C10—C11 | 0.4 (5) |
C1—C2—C3—C4 | −0.6 (6) | C8—C9—C10—C11 | 178.5 (3) |
C2—C3—C4—C5 | −1.1 (6) | C9—C10—C11—C12 | −0.1 (5) |
C3—C4—C5—O1 | −178.3 (3) | C10—C11—C12—C13 | −0.3 (4) |
C3—C4—C5—C6 | 2.9 (5) | C10—C11—C12—O2 | 179.0 (3) |
C2—C1—C6—C5 | 1.3 (4) | O2—C12—C13—C14 | −179.0 (3) |
C2—C1—C6—C7 | −179.2 (3) | C11—C12—C13—C14 | 0.3 (5) |
O1—C5—C6—C1 | 178.2 (3) | C12—C13—C14—C9 | 0.0 (5) |
C4—C5—C6—C1 | −3.0 (4) | C10—C9—C14—C13 | −0.3 (5) |
O1—C5—C6—C7 | −1.3 (4) | C8—C9—C14—C13 | −178.4 (3) |
C4—C5—C6—C7 | 177.5 (3) | C6—C7—N1—C8 | −179.6 (3) |
C1—C6—C7—N1 | 179.4 (3) | C9—C8—N1—C7 | −125.6 (4) |
C5—C6—C7—N1 | −1.0 (4) | C13—C12—O2—C15 | 179.2 (3) |
N1—C8—C9—C10 | −89.5 (4) | C11—C12—O2—C15 | 0.0 (4) |
N1—C8—C9—C14 | 88.6 (5) |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1A···N1 | 0.82 | 1.85 | 2.574 (3) | 146 |
C11—H11···O1i | 0.93 | 2.54 | 3.464 (4) | 175 |
Symmetry code: (i) −x+3, y+1/2, −z+3/2. |
Experimental details
Crystal data | |
Chemical formula | C15H15NO2 |
Mr | 241.28 |
Crystal system, space group | Orthorhombic, P212121 |
Temperature (K) | 293 |
a, b, c (Å) | 5.7190 (8), 12.7229 (19), 17.936 (3) |
V (Å3) | 1305.0 (3) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.08 |
Crystal size (mm) | 0.3 × 0.18 × 0.04 |
Data collection | |
Diffractometer | Bruker SMART APEXII CCD area-detector |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 5776, 1573, 1177 |
Rint | 0.040 |
(sin θ/λ)max (Å−1) | 0.628 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.051, 0.162, 1.13 |
No. of reflections | 1573 |
No. of parameters | 164 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.15, −0.16 |
Computer programs: APEX2 (Bruker, 2008), SAINT (Bruker, 2008), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997), publCIF (Westrip, 2010).
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1A···N1 | 0.82 | 1.85 | 2.574 (3) | 146.4 |
C11—H11···O1i | 0.93 | 2.54 | 3.464 (4) | 174.8 |
Symmetry code: (i) −x+3, y+1/2, −z+3/2. |
Acknowledgements
This work was supported by the 90th Anniversary of Chulalongkorn University Fund (Ratchadaphisek Somphot Endowment Fund) to CP, the Research Funds from the Faculty of Science (A1B1), the Thailand Research Fund (TRF) to NM, and the Thai Government Stimulus Package 2 (TKK2555) under the Project for Establishment of Comprehensive Center for Innovative Food, Health Products and Agrigulture and Center for Petroleum Petrochemicals and Advanced Materials.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Schiff base complexes have gained importance from physiological and pharmacological activities point of view (Adsule et al., 2006; Karthikeyan et al., 2006). As a part of our research focused on the area of transition metal complex-based anticancer agents, the title compound (I) has been prepared as a ligand by Schiff base reaction between 4-methoxybenzylamine and salicylaldehyde.
The molecule of (I) (Fig. 1) adopts a V-shape structure. The dihedral angle between the methoxybenzene ring and 2-methyliminophenol moiety is 73.5 (1)°. The 2-methyliminophenol (C1 to C7, N1 and O1) moiety is nearly planar (r.m.s. deviation = 0.021 Å). The methoxybenzene and 2-methyliminophenol groups are located on the opposite side of the C=N bond, showing an E configuration. The bond lengths and angles in (I) are normal and comparable with those observed in the related compounds (Phurat et al., 2010; Tariq et al., 2010; Khalaji & Simpson, 2009). Intramolecular O—H···N hydrogen bond (Table 1) generates a S(6) ring (Bernstein et al., 1995).
In the crystal structure, weak intermolecular C—H···O interactions (Table 1) link the molecules into chains propagated in direction [010].