organic compounds
1,3-Dimethyl-5-methylsulfonyl-1H-pyrazolo[4,3-e][1,2,4]triazine
aDepartment of Chemistry, University of Podlasie, ul. 3 Maja 54, 08-110 Siedlce, Poland
*Correspondence e-mail: kar@uph.edu.pl
In the title compound, C7H9N5O2S, the pyrazolo[4,3-e][1,2,4]triazine fused-ring system is essentially planar [maximum deviation = 0.0420 (3) Å]. In the crystal, molecules related by twofold axes are linked into a molecular net via intermolecular C—H⋯O and C—H⋯N hydrogen bonds. π–π interactions are observed between the triazine and pyrazole rings of molecules related by the the twofold axis and inversion symmetry with centroid–centroid distances of 3.778 (3) and 3.416 (3) Å, respectively.
Related literature
For background to ). For our work on the development of convenient synthetic approaches for the construction of biologically active heterocycles, see: Karczmarzyk et al. (2007). For related structures, see: Hirata et al. (1996); Rykowski et al. (2000); Cherng-Chyi et al. (1994).
see: Ingall (1984Experimental
Crystal data
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Refinement
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Data collection: KM4B8 (Gałdecki et al., 1996); cell KM4B8; data reduction: DATAPROC (Gałdecki et al., 1995); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: SHELXL97 and WinGX (Farrugia, 1999).
Supporting information
https://doi.org/10.1107/S1600536810047264/pv2349sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536810047264/pv2349Isup2.hkl
To a solution of 2,3-dimethyl-5-methylsulfanyl-1H-pyrazolo[4,3-e][1,2,4]triazine (1 mmol) in benzene (20 ml), water (30 ml), potassium manganate (VII) (3 mmol), catalitic amounts of tetrabuthylammonium bromide (0.2 mmol) and acetic acid (1.5 ml) were added. The reaction mixture was stirred at room temperature for 1 h. A
of Na2S2O5 in water was then added to the mixture until the purple colour disappeared. The organic layer was separated and the aqueos phase was extracted with benzene (3x10 ml). The combined organic extracts were dried over anhydrous MgSO4 and concentrated in vacuo. The residue was purified by on silica gel (eluent: chloroform) to afford the title compound as a yellow solid. Crystals suitable for X-ray were grown by slow evaporation of an ethanol solution.The H atoms were positioned geometrically and treated as riding on their C atoms, with C—H distances of 0.96 Å and were included in the
with Uiso(H) = 1.5Ueq(C).Sulfones have proven to be valuable synthons for the synthesis of a wide variety of biologically active heterocyclic systems (Ingall, 1984). As an extension of our efforts directed towards the development of convenient synthetic approaches for the construction of biologically active heterocycles (Karczmarzyk et al., 2007), we report herein the crystal and molecular structure of the title compound.
The geometry (bond lengths, angles and planarity) of the title molecule (I) is very similar to those observed in closely related structures (Hirata et al., 1996; Rykowski et al., 2000). In the title molecule, a substitution by methylsulfonyl group in the 1,2,4-triazine ring results in a significant deformation of the endocyclic angles N2—C3—N4 of 130.3 (4)° and C3—N4—C5 of 110.6 (4)°. This effect is caused probably by the strong electron-withdrawing property of SO2CH3 substituent and has been reported in similar structures (Cherng-Chyi et al., 1994).
In the π-electron systems of the pyrazolo[4,3-e][1,2,4]triazine fused rings belonging to inversion- (one side) and 2-fold axis- (other side) related molecules overlap each other, with centroid-to-centroid separation of 3.416 (3) Å between the pyrazole ring at (x, y, z) and triazine ring at (-x, 1 - y, -z), and 3.778 (3) Å between pyrazole ring at (x, y, z) and triazine ring at (-x, y, 1/2 - z). The π···π distances are 3.2375 (18) and 3.2719 (18) Å, respectively.
the molecules related by 2-fold axes are linked into molecular net via intermolecular C—H···O and C—H···N hydrogen bonds (Fig. 2 and Tab. 1). In addition, theFor background to
see: Ingall (1984). For our work on the development of convenient synthetic approaches for the construction of biologically active heterocycles, see: Karczmarzyk et al. (2007). For related structures, see: Hirata et al. (1996); Rykowski et al. (2000); Cherng-Chyi et al. (1994).Data collection: KM4B8 (Gałdecki et al., 1996); cell
KM4B8 (Gałdecki et al., 1996); data reduction: DATAPROC (Gałdecki et al., 1995); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008) and WinGX (Farrugia, 1999).C7H9N5O2S | F(000) = 944 |
Mr = 227.25 | Dx = 1.500 Mg m−3 |
Monoclinic, C2/c | Melting point: 444 K |
Hall symbol: -C 2yc | Mo Kα radiation, λ = 0.71073 Å |
a = 17.901 (1) Å | Cell parameters from 25 reflections |
b = 8.1268 (7) Å | θ = 4.4–25.2° |
c = 14.203 (3) Å | µ = 0.31 mm−1 |
β = 103.17 (1)° | T = 293 K |
V = 2011.9 (5) Å3 | Prism, colourless |
Z = 8 | 0.40 × 0.30 × 0.10 mm |
Kuma KM-4 four-circle diffractometer | 1085 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.064 |
Graphite monochromator | θmax = 30.1°, θmin = 2.3° |
ω–2θ scans | h = −25→24 |
Absorption correction: ψ scan (North et al., 1968) | k = −1→11 |
Tmin = 0.860, Tmax = 0.980 | l = −1→19 |
3688 measured reflections | 2 standard reflections every 100 reflections |
2948 independent reflections | intensity decay: 1.4% |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.069 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.227 | H-atom parameters constrained |
S = 1.02 | w = 1/[σ2(Fo2) + (0.1P)2] where P = (Fo2 + 2Fc2)/3 |
2948 reflections | (Δ/σ)max < 0.001 |
139 parameters | Δρmax = 0.81 e Å−3 |
0 restraints | Δρmin = −0.72 e Å−3 |
C7H9N5O2S | V = 2011.9 (5) Å3 |
Mr = 227.25 | Z = 8 |
Monoclinic, C2/c | Mo Kα radiation |
a = 17.901 (1) Å | µ = 0.31 mm−1 |
b = 8.1268 (7) Å | T = 293 K |
c = 14.203 (3) Å | 0.40 × 0.30 × 0.10 mm |
β = 103.17 (1)° |
Kuma KM-4 four-circle diffractometer | 1085 reflections with I > 2σ(I) |
Absorption correction: ψ scan (North et al., 1968) | Rint = 0.064 |
Tmin = 0.860, Tmax = 0.980 | 2 standard reflections every 100 reflections |
3688 measured reflections | intensity decay: 1.4% |
2948 independent reflections |
R[F2 > 2σ(F2)] = 0.069 | 0 restraints |
wR(F2) = 0.227 | H-atom parameters constrained |
S = 1.02 | Δρmax = 0.81 e Å−3 |
2948 reflections | Δρmin = −0.72 e Å−3 |
139 parameters |
Experimental. Yield: 95% and m.p. 444 K. 1H NMR (CDCl3) δ: 2.77 (s, 3H), 3.57 (s, 3H), 4.39 (s, 3H); IR (KBr,ν, cm-1): 2920, 1330, 1120; MS (m/z, %): 227 (8) [M+], 199 (32), 120 (21), 95 (51), 79 (94), 67 (28), 52 (100). Analysis calculated for C7H9N5O2S: C 37.00, H 3.99, N 30.82%; found: C 37.01, H 3.85, N 30.76%. |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S12 | 0.15935 (7) | 0.15917 (15) | 0.19815 (10) | 0.0433 (4) | |
O13 | 0.1310 (2) | 0.0271 (5) | 0.1348 (3) | 0.0748 (13) | |
O14 | 0.1737 (2) | 0.1313 (5) | 0.3001 (3) | 0.0765 (13) | |
N1 | 0.0756 (2) | 0.6040 (5) | 0.1881 (3) | 0.0412 (10) | |
N2 | 0.1192 (2) | 0.4699 (5) | 0.2062 (3) | 0.0373 (9) | |
N4 | 0.02186 (19) | 0.2860 (5) | 0.1191 (3) | 0.0361 (9) | |
N7 | −0.0502 (2) | 0.6833 (5) | 0.0994 (3) | 0.0388 (9) | |
N8 | −0.1138 (2) | 0.6061 (5) | 0.0483 (3) | 0.0435 (10) | |
C3 | 0.0915 (2) | 0.3259 (5) | 0.1696 (3) | 0.0317 (9) | |
C5 | −0.0227 (2) | 0.4200 (5) | 0.1003 (3) | 0.0336 (10) | |
C6 | 0.0051 (2) | 0.5751 (5) | 0.1322 (3) | 0.0332 (10) | |
C9 | −0.0993 (2) | 0.4447 (6) | 0.0469 (3) | 0.0377 (11) | |
C10 | −0.0494 (3) | 0.8619 (6) | 0.1113 (4) | 0.0586 (15) | |
H10A | −0.0770 | 0.8909 | 0.1594 | 0.088* | |
H10B | −0.0732 | 0.9128 | 0.0509 | 0.088* | |
H10C | 0.0027 | 0.8995 | 0.1315 | 0.088* | |
C11 | −0.1567 (3) | 0.3236 (6) | −0.0021 (4) | 0.0567 (14) | |
H11A | −0.2011 | 0.3804 | −0.0381 | 0.085* | |
H11B | −0.1712 | 0.2539 | 0.0453 | 0.085* | |
H11C | −0.1350 | 0.2579 | −0.0454 | 0.085* | |
C15 | 0.2416 (3) | 0.2357 (8) | 0.1689 (5) | 0.0646 (17) | |
H15A | 0.2807 | 0.1526 | 0.1803 | 0.097* | |
H15B | 0.2593 | 0.3302 | 0.2083 | 0.097* | |
H15C | 0.2303 | 0.2669 | 0.1020 | 0.097* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S12 | 0.0358 (6) | 0.0407 (7) | 0.0504 (7) | 0.0015 (6) | 0.0035 (5) | 0.0050 (6) |
O13 | 0.058 (2) | 0.044 (2) | 0.108 (3) | 0.0052 (19) | −0.011 (2) | −0.022 (2) |
O14 | 0.075 (3) | 0.096 (3) | 0.057 (2) | 0.030 (2) | 0.012 (2) | 0.036 (2) |
N1 | 0.0313 (19) | 0.047 (2) | 0.042 (2) | −0.0005 (18) | 0.0021 (16) | −0.0085 (19) |
N2 | 0.0316 (18) | 0.038 (2) | 0.039 (2) | 0.0034 (17) | 0.0013 (15) | 0.0006 (18) |
N4 | 0.0315 (18) | 0.040 (2) | 0.035 (2) | −0.0049 (16) | 0.0025 (16) | 0.0024 (17) |
N7 | 0.0339 (19) | 0.040 (2) | 0.040 (2) | 0.0048 (18) | 0.0033 (16) | −0.0033 (18) |
N8 | 0.0247 (18) | 0.063 (3) | 0.041 (2) | 0.0028 (18) | 0.0028 (16) | 0.000 (2) |
C3 | 0.0264 (18) | 0.036 (2) | 0.031 (2) | −0.0035 (19) | 0.0035 (16) | 0.001 (2) |
C5 | 0.0250 (19) | 0.045 (3) | 0.030 (2) | 0.000 (2) | 0.0058 (16) | 0.003 (2) |
C6 | 0.027 (2) | 0.041 (3) | 0.030 (2) | 0.0020 (19) | 0.0049 (16) | −0.006 (2) |
C9 | 0.025 (2) | 0.051 (3) | 0.035 (3) | −0.004 (2) | 0.0017 (18) | 0.007 (2) |
C10 | 0.057 (3) | 0.052 (3) | 0.061 (4) | 0.014 (3) | 0.000 (3) | −0.003 (3) |
C11 | 0.036 (2) | 0.065 (3) | 0.062 (3) | −0.022 (3) | −0.005 (2) | 0.006 (3) |
C15 | 0.035 (3) | 0.073 (4) | 0.089 (4) | 0.009 (3) | 0.020 (3) | 0.023 (3) |
S12—O13 | 1.418 (4) | C5—C6 | 1.393 (6) |
S12—O14 | 1.430 (4) | C5—C9 | 1.423 (6) |
S12—C15 | 1.733 (5) | C9—C11 | 1.476 (6) |
S12—C3 | 1.803 (4) | C10—H10A | 0.9600 |
N1—N2 | 1.331 (5) | C10—H10B | 0.9600 |
N1—C6 | 1.350 (5) | C10—H10C | 0.9600 |
N2—C3 | 1.330 (5) | C11—H11A | 0.9600 |
N4—C3 | 1.329 (5) | C11—H11B | 0.9600 |
N4—C5 | 1.340 (5) | C11—H11C | 0.9600 |
N7—C6 | 1.326 (5) | C15—H15A | 0.9600 |
N7—N8 | 1.357 (5) | C15—H15B | 0.9600 |
N7—C10 | 1.461 (6) | C15—H15C | 0.9600 |
N8—C9 | 1.338 (6) | ||
O13—S12—O14 | 118.6 (3) | N8—C9—C5 | 107.3 (4) |
O13—S12—C15 | 108.7 (3) | N8—C9—C11 | 123.0 (4) |
O14—S12—C15 | 109.4 (3) | C5—C9—C11 | 129.8 (4) |
O13—S12—C3 | 107.5 (2) | N7—C10—H10A | 109.5 |
O14—S12—C3 | 107.6 (2) | N7—C10—H10B | 109.5 |
C15—S12—C3 | 104.0 (2) | H10A—C10—H10B | 109.5 |
N2—N1—C6 | 113.5 (4) | N7—C10—H10C | 109.5 |
N1—N2—C3 | 119.7 (3) | H10A—C10—H10C | 109.5 |
C3—N4—C5 | 110.6 (4) | H10B—C10—H10C | 109.5 |
C6—N7—N8 | 110.5 (4) | C9—C11—H11A | 109.5 |
C6—N7—C10 | 129.1 (4) | C9—C11—H11B | 109.5 |
N8—N7—C10 | 120.4 (4) | H11A—C11—H11B | 109.5 |
C9—N8—N7 | 108.6 (3) | C9—C11—H11C | 109.5 |
N4—C3—N2 | 130.3 (4) | H11A—C11—H11C | 109.5 |
N4—C3—S12 | 116.0 (3) | H11B—C11—H11C | 109.5 |
N2—C3—S12 | 113.6 (3) | S12—C15—H15A | 109.5 |
N4—C5—C6 | 121.3 (4) | S12—C15—H15B | 109.5 |
N4—C5—C9 | 132.7 (4) | H15A—C15—H15B | 109.5 |
C6—C5—C9 | 106.0 (4) | S12—C15—H15C | 109.5 |
N7—C6—N1 | 127.9 (4) | H15A—C15—H15C | 109.5 |
N7—C6—C5 | 107.7 (4) | H15B—C15—H15C | 109.5 |
N1—C6—C5 | 124.4 (4) | ||
C6—N1—N2—C3 | 0.2 (6) | C10—N7—C6—N1 | 2.4 (8) |
C6—N7—N8—C9 | −0.8 (5) | N8—N7—C6—C5 | 1.0 (5) |
C10—N7—N8—C9 | 179.0 (4) | C10—N7—C6—C5 | −178.8 (5) |
C5—N4—C3—N2 | 4.2 (6) | N2—N1—C6—N7 | −177.7 (4) |
C5—N4—C3—S12 | −178.4 (3) | N2—N1—C6—C5 | 3.7 (6) |
N1—N2—C3—N4 | −4.5 (7) | N4—C5—C6—N7 | 177.2 (4) |
N1—N2—C3—S12 | 178.1 (3) | C9—C5—C6—N7 | −0.8 (5) |
O13—S12—C3—N4 | 17.9 (4) | N4—C5—C6—N1 | −3.9 (7) |
O14—S12—C3—N4 | −110.9 (4) | C9—C5—C6—N1 | 178.1 (4) |
C15—S12—C3—N4 | 133.0 (4) | N7—N8—C9—C5 | 0.2 (5) |
O13—S12—C3—N2 | −164.3 (3) | N7—N8—C9—C11 | 179.5 (4) |
O14—S12—C3—N2 | 66.9 (4) | N4—C5—C9—N8 | −177.3 (4) |
C15—S12—C3—N2 | −49.2 (4) | C6—C5—C9—N8 | 0.3 (5) |
C3—N4—C5—C6 | 0.0 (6) | N4—C5—C9—C11 | 3.5 (8) |
C3—N4—C5—C9 | 177.3 (4) | C6—C5—C9—C11 | −178.9 (5) |
N8—N7—C6—N1 | −177.9 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
C10—H10C···O13i | 0.96 | 2.51 | 3.442 (7) | 163 |
C11—H11B···O14ii | 0.96 | 2.42 | 3.341 (7) | 161 |
C15—H15A···N2iii | 0.96 | 2.59 | 3.466 (7) | 152 |
Cg(pyrazole)···Cg(triazine)ii | 3.778 (3) | |||
Cg(pyrazole)···Cg(triazine)iv | 3.416 (3) |
Symmetry codes: (i) x, y+1, z; (ii) −x, y, −z+1/2; (iii) −x+1/2, y−1/2, −z+1/2; (iv) x+1/2, y+3/2, z. |
Experimental details
Crystal data | |
Chemical formula | C7H9N5O2S |
Mr | 227.25 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 293 |
a, b, c (Å) | 17.901 (1), 8.1268 (7), 14.203 (3) |
β (°) | 103.17 (1) |
V (Å3) | 2011.9 (5) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.31 |
Crystal size (mm) | 0.40 × 0.30 × 0.10 |
Data collection | |
Diffractometer | Kuma KM-4 four-circle |
Absorption correction | ψ scan (North et al., 1968) |
Tmin, Tmax | 0.860, 0.980 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 3688, 2948, 1085 |
Rint | 0.064 |
(sin θ/λ)max (Å−1) | 0.705 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.069, 0.227, 1.02 |
No. of reflections | 2948 |
No. of parameters | 139 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.81, −0.72 |
Computer programs: KM4B8 (Gałdecki et al., 1996), DATAPROC (Gałdecki et al., 1995), SHELXS97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 1997), SHELXL97 (Sheldrick, 2008) and WinGX (Farrugia, 1999).
D—H···A | D—H | H···A | D···A | D—H···A |
C10—H10C···O13i | 0.96 | 2.51 | 3.442 (7) | 163 |
C11—H11B···O14ii | 0.96 | 2.42 | 3.341 (7) | 161 |
C15—H15A···N2iii | 0.96 | 2.59 | 3.466 (7) | 152 |
Symmetry codes: (i) x, y+1, z; (ii) −x, y, −z+1/2; (iii) −x+1/2, y−1/2, −z+1/2. |
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Sulfones have proven to be valuable synthons for the synthesis of a wide variety of biologically active heterocyclic systems (Ingall, 1984). As an extension of our efforts directed towards the development of convenient synthetic approaches for the construction of biologically active heterocycles (Karczmarzyk et al., 2007), we report herein the crystal and molecular structure of the title compound.
The geometry (bond lengths, angles and planarity) of the title molecule (I) is very similar to those observed in closely related structures (Hirata et al., 1996; Rykowski et al., 2000). In the title molecule, a substitution by methylsulfonyl group in the 1,2,4-triazine ring results in a significant deformation of the endocyclic angles N2—C3—N4 of 130.3 (4)° and C3—N4—C5 of 110.6 (4)°. This effect is caused probably by the strong electron-withdrawing property of SO2CH3 substituent and has been reported in similar structures (Cherng-Chyi et al., 1994).
In the crystal structure, the molecules related by 2-fold axes are linked into molecular net via intermolecular C—H···O and C—H···N hydrogen bonds (Fig. 2 and Tab. 1). In addition, the π-electron systems of the pyrazolo[4,3-e][1,2,4]triazine fused rings belonging to inversion- (one side) and 2-fold axis- (other side) related molecules overlap each other, with centroid-to-centroid separation of 3.416 (3) Å between the pyrazole ring at (x, y, z) and triazine ring at (-x, 1 - y, -z), and 3.778 (3) Å between pyrazole ring at (x, y, z) and triazine ring at (-x, y, 1/2 - z). The π···π distances are 3.2375 (18) and 3.2719 (18) Å, respectively.