organic compounds
Bonvalotidine A acetone solvate from Delphinium bonvalotii Franch
aDepartment of Chemistry and Life Sciences, Leshan Teachers College, Leshan 614004, People's Republic of China
*Correspondence e-mail: fzchen7200@163.com
The title compound (systematic name: 5,6β-dihydroxy-1α,14α,16β-trimethoxy-4-methyl-7β,8-methylenedioxy-20-ethylaconitan-6-yl acetate acetone monosolvate), C27H41NO8·C3H6O, was isolated from Delphinium bonvalotii Franch, and is a typical C19-diterpenoid alkaloid. The molecule has a lycoctonine carbon skeleton with four six-membered rings and three five-membered rings. Three six-membered rings adopt the chair conformations while the fourth adopts a boat conformation, while the five-membered rings have the envelope conformations. The solvent molecule links with the organic molecule via a classical O—H⋯O hydrogen bond. Weak C—H⋯O hydrogen bonding is present in the structure. An intramolecular O—H⋯O hydrogen bond also occurs.
Related literature
For the chemical structure of the title compound established from NMR and MS data, see: He et al. (2006). For the crystal structures of related C19-diterpenoid see: Wang et al. (2009).
Experimental
Crystal data
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Data collection
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Refinement
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Data collection: CrysAlis CCD (Oxford Diffraction, 2008); cell CrysAlis RED (Oxford Diffraction, 2008); data reduction: CrysAlis RED; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: OLEX2 (Dolomanov et al. 2009); software used to prepare material for publication: SHELXL97.
Supporting information
https://doi.org/10.1107/S1600536810047562/xu5072sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536810047562/xu5072Isup2.hkl
The title compound was isolated from the root of Delphinium bonvalotii Franch. Single crystals suitable for X-ray structure analysis were obtained by slow evaporation from an acetone solution at room temperature.
Hydroxy H atom was located in a difference Fourier map and refined isotropically. Other H atoms were located geometrically with C—H = 0.98–1.00 Å, and refined using a riding model with Uiso(H) = 1.2 Ueq(C). As no significant anomalous scatterings, Friedel pairs were merged.
The title compound, bonvalotidine A, was previously isolated from Delphinium bonvalotii Franch (He et al. 2006), and its structure was established from the NMR and MS data. In our recent investigation, it was isolation from the root of Delphinium bonvalotii Franch collected in the E'mei Mountain, Sichuan Province of P. R. China in September, 2009. A nd its
was determined. The naming conforming referred to the literature (Wang et al. 2009). The molecular structure of the title compound is shown in Fig. 1. Six-membered rings A (C1/C2/C3/C4/C5/C11) and B (C7/C8/C9/C10/C11/C17) adopt chair conformations; six-membered ring D (C8/C9/C14/C13/C16/C15) adopt a boat conformation; six-membered N-containing heterocyclic ring E (C4/C5/C11/C17/N1/C19) displays the same chair conformation; five-membered rings C (C9/C10/C12/C13/C14) and F (C5/C6/C7/C17/C11) adopt an While the five-membered O-containing heterocyclic G (O5/C7/C8/O6/C25) displays an envelope conformation.The
contains intermolecular O—H···O hydrogen bond between the hydroxyl group and carbonyl O atom. The lattice acetone molecule links with the organic molecule via O—H···O hydrogen is present in the (Table 1).For the chemical structure of the title compound established from NMR and MS data, see: He et al. (2006). For the crystal structures of related C19-diterpenoid
see: Wang et al. (2009).Data collection: CrysAlis CCD (Oxford Diffraction, 2008); cell
CrysAlis RED (Oxford Diffraction, 2008); data reduction: CrysAlis RED (Oxford Diffraction, 2008); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: OLEX2 (Dolomanov et al. 2009); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).Fig. 1. The molecular structure of thetitle compound with 30% probabiliy displacement ellipsoids for no-H atoms. Hatoms have been omitted clarity. Dashed line indicates hydrogen bonding. |
C27H41NO8·C3H6O | F(000) = 1224 |
Mr = 565.69 | Dx = 1.324 Mg m−3 |
Orthorhombic, P212121 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2ac 2ab | Cell parameters from 6568 reflections |
a = 8.4260 (8) Å | θ = 3.1–25.0° |
b = 9.5546 (7) Å | µ = 0.10 mm−1 |
c = 35.237 (3) Å | T = 120 K |
V = 2836.8 (4) Å3 | Block, colorless |
Z = 4 | 0.42 × 0.36 × 0.21 mm |
Oxford Diffraction Xcalibur Eos diffractometer | 2690 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.022 |
Graphite monochromator | θmax = 25.2°, θmin = 3.2° |
ω scan | h = −10→9 |
9839 measured reflections | k = −11→11 |
2930 independent reflections | l = −22→42 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.044 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.104 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.08 | w = 1/[σ2(Fo2) + (0.0438P)2 + 2.2374P] where P = (Fo2 + 2Fc2)/3 |
2930 reflections | (Δ/σ)max = 0.002 |
373 parameters | Δρmax = 0.69 e Å−3 |
0 restraints | Δρmin = −0.27 e Å−3 |
C27H41NO8·C3H6O | V = 2836.8 (4) Å3 |
Mr = 565.69 | Z = 4 |
Orthorhombic, P212121 | Mo Kα radiation |
a = 8.4260 (8) Å | µ = 0.10 mm−1 |
b = 9.5546 (7) Å | T = 120 K |
c = 35.237 (3) Å | 0.42 × 0.36 × 0.21 mm |
Oxford Diffraction Xcalibur Eos diffractometer | 2690 reflections with I > 2σ(I) |
9839 measured reflections | Rint = 0.022 |
2930 independent reflections |
R[F2 > 2σ(F2)] = 0.044 | 0 restraints |
wR(F2) = 0.104 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.08 | Δρmax = 0.69 e Å−3 |
2930 reflections | Δρmin = −0.27 e Å−3 |
373 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.6059 (3) | 0.7225 (2) | 0.47254 (6) | 0.0246 (5) | |
O2 | 0.7919 (3) | 0.6104 (3) | 0.35691 (7) | 0.0269 (6) | |
O3 | 0.5491 (3) | 0.5711 (2) | 0.31240 (6) | 0.0184 (5) | |
O4 | 0.4301 (4) | 0.3889 (3) | 0.28401 (7) | 0.0398 (7) | |
O5 | 0.2412 (3) | 0.4687 (2) | 0.36445 (6) | 0.0189 (5) | |
O6 | 0.2372 (3) | 0.6543 (2) | 0.32229 (6) | 0.0186 (5) | |
O7 | 0.2550 (3) | 0.9818 (2) | 0.32957 (6) | 0.0223 (5) | |
O8 | 0.0416 (3) | 0.9541 (3) | 0.40687 (7) | 0.0329 (6) | |
O9 | 0.8945 (3) | 0.6682 (3) | 0.27882 (8) | 0.0436 (7) | |
N1 | 0.4624 (3) | 0.4363 (3) | 0.43288 (7) | 0.0173 (6) | |
C1 | 0.6960 (4) | 0.6670 (3) | 0.44119 (9) | 0.0231 (7) | |
H1 | 0.7796 | 0.7371 | 0.4345 | 0.028* | |
C2 | 0.7798 (4) | 0.5360 (4) | 0.45604 (10) | 0.0271 (8) | |
H2A | 0.8683 | 0.5645 | 0.4728 | 0.033* | |
H2B | 0.7041 | 0.4806 | 0.4714 | 0.033* | |
C3 | 0.8446 (4) | 0.4447 (4) | 0.42437 (10) | 0.0271 (8) | |
H3A | 0.8870 | 0.3568 | 0.4353 | 0.033* | |
H3B | 0.9332 | 0.4940 | 0.4116 | 0.033* | |
C4 | 0.7166 (4) | 0.4097 (3) | 0.39515 (9) | 0.0214 (7) | |
C5 | 0.6632 (4) | 0.5480 (3) | 0.37573 (9) | 0.0182 (7) | |
C6 | 0.5217 (4) | 0.5115 (3) | 0.34940 (8) | 0.0161 (6) | |
H6 | 0.5173 | 0.4074 | 0.3466 | 0.019* | |
C7 | 0.3717 (4) | 0.5591 (3) | 0.37131 (9) | 0.0151 (6) | |
C8 | 0.3050 (4) | 0.7005 (3) | 0.35823 (9) | 0.0180 (7) | |
C9 | 0.4386 (4) | 0.8063 (3) | 0.35323 (8) | 0.0161 (6) | |
H9 | 0.4963 | 0.7901 | 0.3288 | 0.019* | |
C10 | 0.5551 (4) | 0.7971 (3) | 0.38791 (9) | 0.0191 (7) | |
H10 | 0.6599 | 0.8331 | 0.3789 | 0.023* | |
C11 | 0.5873 (4) | 0.6482 (3) | 0.40582 (9) | 0.0169 (7) | |
C12 | 0.4868 (5) | 0.9106 (3) | 0.41606 (9) | 0.0287 (8) | |
H12A | 0.4622 | 0.8675 | 0.4409 | 0.034* | |
H12B | 0.5654 | 0.9862 | 0.4200 | 0.034* | |
C13 | 0.3358 (4) | 0.9694 (3) | 0.39794 (9) | 0.0255 (8) | |
H13 | 0.3195 | 1.0693 | 0.4054 | 0.031* | |
C14 | 0.3782 (4) | 0.9577 (3) | 0.35576 (9) | 0.0204 (7) | |
H14 | 0.4680 | 1.0229 | 0.3501 | 0.024* | |
C15 | 0.1656 (4) | 0.7551 (3) | 0.38249 (10) | 0.0232 (7) | |
H15B | 0.0782 | 0.7794 | 0.3649 | 0.028* | |
H15A | 0.1278 | 0.6763 | 0.3983 | 0.028* | |
C16 | 0.1906 (4) | 0.8800 (3) | 0.40873 (9) | 0.0257 (8) | |
H16 | 0.2056 | 0.8445 | 0.4352 | 0.031* | |
C17 | 0.4316 (4) | 0.5675 (3) | 0.41273 (8) | 0.0158 (6) | |
H17 | 0.3575 | 0.6267 | 0.4280 | 0.019* | |
C18 | 0.7886 (4) | 0.3079 (4) | 0.36619 (10) | 0.0284 (8) | |
H18B | 0.8907 | 0.3444 | 0.3573 | 0.043* | |
H18C | 0.7162 | 0.2978 | 0.3446 | 0.043* | |
H18A | 0.8047 | 0.2164 | 0.3782 | 0.043* | |
C19 | 0.5701 (4) | 0.3402 (3) | 0.41337 (9) | 0.0202 (7) | |
H19B | 0.5099 | 0.2908 | 0.3933 | 0.024* | |
H19A | 0.6069 | 0.2690 | 0.4318 | 0.024* | |
C20 | 0.3177 (4) | 0.3659 (3) | 0.44604 (9) | 0.0234 (7) | |
H20B | 0.2703 | 0.3131 | 0.4247 | 0.028* | |
H20A | 0.2397 | 0.4371 | 0.4543 | 0.028* | |
C21 | 0.3508 (5) | 0.2660 (4) | 0.47871 (10) | 0.0301 (8) | |
H21C | 0.4115 | 0.1856 | 0.4694 | 0.045* | |
H21B | 0.2502 | 0.2336 | 0.4895 | 0.045* | |
H21A | 0.4122 | 0.3146 | 0.4983 | 0.045* | |
C22 | 0.6932 (5) | 0.8197 (4) | 0.49485 (10) | 0.0325 (9) | |
H22B | 0.7969 | 0.7796 | 0.5012 | 0.049* | |
H22A | 0.6346 | 0.8399 | 0.5182 | 0.049* | |
H22C | 0.7084 | 0.9064 | 0.4805 | 0.049* | |
C23 | 0.4946 (4) | 0.5004 (3) | 0.28192 (9) | 0.0241 (7) | |
C24 | 0.5246 (5) | 0.5798 (4) | 0.24627 (9) | 0.0305 (9) | |
H24C | 0.5160 | 0.5165 | 0.2245 | 0.046* | |
H24A | 0.6313 | 0.6204 | 0.2471 | 0.046* | |
H24B | 0.4460 | 0.6549 | 0.2438 | 0.046* | |
C25 | 0.1621 (4) | 0.5249 (3) | 0.33175 (9) | 0.0215 (7) | |
H25B | 0.1700 | 0.4587 | 0.3102 | 0.026* | |
H25A | 0.0484 | 0.5406 | 0.3374 | 0.026* | |
C26 | 0.2066 (5) | 1.1253 (3) | 0.32951 (10) | 0.0296 (8) | |
H26A | 0.1479 | 1.1457 | 0.3529 | 0.044* | |
H26C | 0.1383 | 1.1429 | 0.3075 | 0.044* | |
H26B | 0.3006 | 1.1856 | 0.3281 | 0.044* | |
C27 | 0.0114 (5) | 1.0354 (4) | 0.43882 (11) | 0.0390 (9) | |
H27A | 0.0191 | 0.9770 | 0.4616 | 0.059* | |
H27C | −0.0955 | 1.0752 | 0.4370 | 0.059* | |
H27B | 0.0895 | 1.1112 | 0.4403 | 0.059* | |
C28 | 0.9445 (5) | 0.7871 (4) | 0.27569 (11) | 0.0359 (9) | |
C29 | 1.0840 (5) | 0.8220 (5) | 0.25177 (11) | 0.0398 (10) | |
H29C | 1.1123 | 0.7409 | 0.2362 | 0.060* | |
H29A | 1.1739 | 0.8469 | 0.2681 | 0.060* | |
H29B | 1.0580 | 0.9013 | 0.2353 | 0.060* | |
C30 | 0.8676 (6) | 0.9039 (5) | 0.29680 (14) | 0.0504 (12) | |
H30B | 0.7676 | 0.8711 | 0.3079 | 0.076* | |
H30C | 0.8460 | 0.9814 | 0.2793 | 0.076* | |
H30A | 0.9384 | 0.9361 | 0.3171 | 0.076* | |
H2 | 0.769 (5) | 0.618 (5) | 0.3296 (13) | 0.059 (14)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0318 (13) | 0.0243 (12) | 0.0178 (11) | −0.0064 (11) | −0.0067 (10) | 0.0012 (10) |
O2 | 0.0167 (12) | 0.0326 (13) | 0.0315 (14) | −0.0044 (10) | 0.0015 (11) | 0.0099 (11) |
O3 | 0.0217 (11) | 0.0168 (11) | 0.0165 (10) | −0.0010 (9) | 0.0041 (9) | −0.0009 (9) |
O4 | 0.0657 (19) | 0.0266 (13) | 0.0271 (13) | −0.0164 (14) | 0.0058 (14) | −0.0070 (11) |
O5 | 0.0163 (10) | 0.0202 (11) | 0.0203 (11) | −0.0043 (10) | −0.0014 (9) | 0.0020 (9) |
O6 | 0.0179 (11) | 0.0204 (11) | 0.0174 (11) | −0.0032 (10) | −0.0009 (9) | 0.0010 (9) |
O7 | 0.0299 (12) | 0.0156 (11) | 0.0214 (11) | 0.0038 (10) | −0.0032 (11) | 0.0038 (9) |
O8 | 0.0400 (14) | 0.0306 (13) | 0.0281 (13) | 0.0117 (13) | 0.0030 (12) | −0.0015 (12) |
O9 | 0.0386 (16) | 0.0432 (16) | 0.0491 (17) | −0.0146 (14) | −0.0111 (14) | 0.0109 (14) |
N1 | 0.0213 (13) | 0.0133 (12) | 0.0175 (12) | −0.0007 (11) | 0.0019 (11) | 0.0027 (11) |
C1 | 0.0236 (17) | 0.0188 (16) | 0.0270 (17) | −0.0058 (14) | −0.0051 (15) | 0.0059 (14) |
C2 | 0.0289 (18) | 0.0255 (17) | 0.0268 (17) | −0.0038 (16) | −0.0118 (16) | 0.0082 (15) |
C3 | 0.0211 (16) | 0.0280 (17) | 0.0323 (19) | 0.0018 (16) | −0.0058 (16) | 0.0121 (16) |
C4 | 0.0194 (16) | 0.0182 (15) | 0.0265 (17) | 0.0022 (14) | 0.0038 (14) | 0.0054 (14) |
C5 | 0.0142 (15) | 0.0175 (15) | 0.0230 (16) | −0.0006 (13) | 0.0002 (14) | 0.0056 (14) |
C6 | 0.0198 (15) | 0.0131 (14) | 0.0153 (15) | −0.0009 (13) | 0.0045 (13) | 0.0031 (12) |
C7 | 0.0155 (15) | 0.0146 (14) | 0.0152 (15) | −0.0039 (13) | 0.0002 (13) | −0.0016 (13) |
C8 | 0.0195 (16) | 0.0187 (15) | 0.0157 (15) | 0.0025 (13) | −0.0004 (13) | 0.0001 (13) |
C9 | 0.0215 (15) | 0.0149 (14) | 0.0118 (14) | 0.0003 (13) | −0.0011 (13) | 0.0013 (12) |
C10 | 0.0260 (17) | 0.0144 (15) | 0.0171 (15) | −0.0048 (14) | −0.0060 (14) | 0.0024 (13) |
C11 | 0.0192 (16) | 0.0148 (15) | 0.0166 (15) | −0.0022 (13) | −0.0038 (13) | 0.0036 (12) |
C12 | 0.048 (2) | 0.0183 (16) | 0.0202 (16) | 0.0011 (17) | −0.0103 (17) | −0.0036 (14) |
C13 | 0.043 (2) | 0.0161 (15) | 0.0170 (16) | 0.0085 (16) | −0.0071 (15) | −0.0017 (13) |
C14 | 0.0310 (18) | 0.0135 (14) | 0.0167 (15) | 0.0001 (14) | −0.0027 (15) | 0.0020 (13) |
C15 | 0.0216 (16) | 0.0235 (16) | 0.0246 (17) | 0.0042 (15) | 0.0049 (14) | 0.0022 (14) |
C16 | 0.037 (2) | 0.0241 (17) | 0.0161 (16) | 0.0129 (16) | 0.0013 (15) | 0.0044 (14) |
C17 | 0.0185 (15) | 0.0127 (14) | 0.0162 (15) | −0.0012 (13) | 0.0005 (13) | −0.0014 (13) |
C18 | 0.0256 (18) | 0.0260 (17) | 0.0334 (19) | 0.0099 (15) | 0.0078 (16) | 0.0069 (15) |
C19 | 0.0223 (16) | 0.0166 (15) | 0.0218 (16) | 0.0007 (14) | 0.0025 (14) | 0.0053 (13) |
C20 | 0.0256 (17) | 0.0221 (16) | 0.0227 (17) | −0.0020 (15) | 0.0062 (15) | 0.0038 (14) |
C21 | 0.037 (2) | 0.0283 (18) | 0.0254 (19) | −0.0100 (17) | 0.0003 (16) | 0.0055 (15) |
C22 | 0.041 (2) | 0.0332 (19) | 0.0238 (18) | −0.0082 (18) | −0.0118 (17) | 0.0003 (16) |
C23 | 0.0291 (17) | 0.0205 (16) | 0.0226 (17) | 0.0002 (15) | 0.0054 (15) | −0.0046 (14) |
C24 | 0.036 (2) | 0.036 (2) | 0.0194 (16) | −0.0043 (18) | 0.0030 (16) | 0.0003 (15) |
C25 | 0.0187 (15) | 0.0217 (16) | 0.0241 (17) | −0.0033 (14) | −0.0024 (14) | 0.0023 (14) |
C26 | 0.043 (2) | 0.0215 (17) | 0.0241 (18) | 0.0090 (16) | −0.0003 (17) | 0.0026 (14) |
C27 | 0.036 (2) | 0.044 (2) | 0.037 (2) | 0.007 (2) | 0.0103 (18) | −0.0029 (18) |
C28 | 0.0307 (19) | 0.041 (2) | 0.036 (2) | −0.0108 (18) | −0.0177 (18) | 0.0152 (19) |
C29 | 0.043 (2) | 0.045 (2) | 0.032 (2) | −0.008 (2) | −0.0068 (19) | 0.0083 (19) |
C30 | 0.041 (2) | 0.048 (3) | 0.062 (3) | −0.003 (2) | 0.001 (2) | 0.017 (2) |
O1—C22 | 1.421 (4) | C12—C13 | 1.531 (5) |
O1—C1 | 1.442 (4) | C12—H12A | 0.9900 |
O2—C5 | 1.404 (4) | C12—H12B | 0.9900 |
O2—H2 | 0.99 (5) | C13—C14 | 1.533 (4) |
O3—C23 | 1.349 (4) | C13—C16 | 1.540 (5) |
O3—C6 | 1.441 (3) | C13—H13 | 1.0000 |
O4—C23 | 1.198 (4) | C14—H14 | 1.0000 |
O5—C7 | 1.419 (4) | C15—C16 | 1.524 (5) |
O5—C25 | 1.436 (4) | C15—H15B | 0.9900 |
O6—C25 | 1.429 (4) | C15—H15A | 0.9900 |
O6—C8 | 1.457 (4) | C16—H16 | 1.0000 |
O7—C14 | 1.408 (4) | C17—H17 | 1.0000 |
O7—C26 | 1.431 (4) | C18—H18B | 0.9800 |
O8—C27 | 1.391 (4) | C18—H18C | 0.9800 |
O8—C16 | 1.443 (4) | C18—H18A | 0.9800 |
O9—C28 | 1.217 (5) | C19—H19B | 0.9900 |
N1—C19 | 1.462 (4) | C19—H19A | 0.9900 |
N1—C17 | 1.464 (4) | C20—C21 | 1.521 (4) |
N1—C20 | 1.468 (4) | C20—H20B | 0.9900 |
C1—C2 | 1.530 (5) | C20—H20A | 0.9900 |
C1—C11 | 1.557 (4) | C21—H21C | 0.9800 |
C1—H1 | 1.0000 | C21—H21B | 0.9800 |
C2—C3 | 1.518 (5) | C21—H21A | 0.9800 |
C2—H2A | 0.9900 | C22—H22B | 0.9800 |
C2—H2B | 0.9900 | C22—H22A | 0.9800 |
C3—C4 | 1.528 (5) | C22—H22C | 0.9800 |
C3—H3A | 0.9900 | C23—C24 | 1.489 (5) |
C3—H3B | 0.9900 | C24—H24C | 0.9800 |
C4—C18 | 1.535 (5) | C24—H24A | 0.9800 |
C4—C19 | 1.542 (4) | C24—H24B | 0.9800 |
C4—C5 | 1.555 (4) | C25—H25B | 0.9900 |
C5—C6 | 1.550 (4) | C25—H25A | 0.9900 |
C5—C11 | 1.566 (4) | C26—H26A | 0.9800 |
C6—C7 | 1.549 (4) | C26—H26C | 0.9800 |
C6—H6 | 1.0000 | C26—H26B | 0.9800 |
C7—C8 | 1.534 (4) | C27—H27A | 0.9800 |
C7—C17 | 1.547 (4) | C27—H27C | 0.9800 |
C8—C9 | 1.523 (4) | C27—H27B | 0.9800 |
C8—C15 | 1.544 (4) | C28—C29 | 1.484 (6) |
C9—C14 | 1.536 (4) | C28—C30 | 1.490 (6) |
C9—C10 | 1.570 (4) | C29—H29C | 0.9800 |
C9—H9 | 1.0000 | C29—H29A | 0.9800 |
C10—C12 | 1.578 (4) | C29—H29B | 0.9800 |
C10—C11 | 1.579 (4) | C30—H30B | 0.9800 |
C10—H10 | 1.0000 | C30—H30C | 0.9800 |
C11—C17 | 1.541 (4) | C30—H30A | 0.9800 |
C22—O1—C1 | 113.1 (3) | C13—C14—H14 | 109.0 |
C5—O2—H2 | 110 (3) | C9—C14—H14 | 109.0 |
C23—O3—C6 | 117.9 (2) | C16—C15—C8 | 119.7 (3) |
C7—O5—C25 | 105.6 (2) | C16—C15—H15B | 107.4 |
C25—O6—C8 | 103.5 (2) | C8—C15—H15B | 107.4 |
C14—O7—C26 | 111.6 (3) | C16—C15—H15A | 107.4 |
C27—O8—C16 | 113.3 (3) | C8—C15—H15A | 107.4 |
C19—N1—C17 | 114.8 (2) | H15B—C15—H15A | 106.9 |
C19—N1—C20 | 112.1 (2) | O8—C16—C15 | 103.7 (3) |
C17—N1—C20 | 113.5 (2) | O8—C16—C13 | 114.1 (3) |
O1—C1—C2 | 106.4 (3) | C15—C16—C13 | 113.2 (3) |
O1—C1—C11 | 110.2 (3) | O8—C16—H16 | 108.5 |
C2—C1—C11 | 116.8 (3) | C15—C16—H16 | 108.5 |
O1—C1—H1 | 107.7 | C13—C16—H16 | 108.5 |
C2—C1—H1 | 107.7 | N1—C17—C11 | 110.7 (2) |
C11—C1—H1 | 107.7 | N1—C17—C7 | 118.1 (2) |
C3—C2—C1 | 112.6 (3) | C11—C17—C7 | 98.9 (2) |
C3—C2—H2A | 109.1 | N1—C17—H17 | 109.5 |
C1—C2—H2A | 109.1 | C11—C17—H17 | 109.5 |
C3—C2—H2B | 109.1 | C7—C17—H17 | 109.5 |
C1—C2—H2B | 109.1 | C4—C18—H18B | 109.5 |
H2A—C2—H2B | 107.8 | C4—C18—H18C | 109.5 |
C2—C3—C4 | 111.5 (3) | H18B—C18—H18C | 109.5 |
C2—C3—H3A | 109.3 | C4—C18—H18A | 109.5 |
C4—C3—H3A | 109.3 | H18B—C18—H18A | 109.5 |
C2—C3—H3B | 109.3 | H18C—C18—H18A | 109.5 |
C4—C3—H3B | 109.3 | N1—C19—C4 | 115.0 (3) |
H3A—C3—H3B | 108.0 | N1—C19—H19B | 108.5 |
C3—C4—C18 | 107.9 (3) | C4—C19—H19B | 108.5 |
C3—C4—C19 | 112.3 (3) | N1—C19—H19A | 108.5 |
C18—C4—C19 | 108.7 (3) | C4—C19—H19A | 108.5 |
C3—C4—C5 | 108.4 (3) | H19B—C19—H19A | 107.5 |
C18—C4—C5 | 111.1 (3) | N1—C20—C21 | 112.0 (3) |
C19—C4—C5 | 108.5 (2) | N1—C20—H20B | 109.2 |
O2—C5—C6 | 114.0 (3) | C21—C20—H20B | 109.2 |
O2—C5—C4 | 110.2 (2) | N1—C20—H20A | 109.2 |
C6—C5—C4 | 107.2 (2) | C21—C20—H20A | 109.2 |
O2—C5—C11 | 112.0 (3) | H20B—C20—H20A | 107.9 |
C6—C5—C11 | 103.2 (2) | C20—C21—H21C | 109.5 |
C4—C5—C11 | 109.9 (3) | C20—C21—H21B | 109.5 |
O3—C6—C7 | 117.8 (2) | H21C—C21—H21B | 109.5 |
O3—C6—C5 | 109.2 (2) | C20—C21—H21A | 109.5 |
C7—C6—C5 | 105.3 (2) | H21C—C21—H21A | 109.5 |
O3—C6—H6 | 108.1 | H21B—C21—H21A | 109.5 |
C7—C6—H6 | 108.1 | O1—C22—H22B | 109.5 |
C5—C6—H6 | 108.1 | O1—C22—H22A | 109.5 |
O5—C7—C8 | 101.6 (2) | H22B—C22—H22A | 109.5 |
O5—C7—C17 | 116.4 (2) | O1—C22—H22C | 109.5 |
C8—C7—C17 | 110.9 (2) | H22B—C22—H22C | 109.5 |
O5—C7—C6 | 111.6 (2) | H22A—C22—H22C | 109.5 |
C8—C7—C6 | 114.1 (2) | O4—C23—O3 | 123.4 (3) |
C17—C7—C6 | 102.7 (2) | O4—C23—C24 | 125.6 (3) |
O6—C8—C9 | 112.9 (2) | O3—C23—C24 | 111.0 (3) |
O6—C8—C7 | 98.0 (2) | C23—C24—H24C | 109.5 |
C9—C8—C7 | 110.4 (2) | C23—C24—H24A | 109.5 |
O6—C8—C15 | 106.6 (2) | H24C—C24—H24A | 109.5 |
C9—C8—C15 | 113.7 (3) | C23—C24—H24B | 109.5 |
C7—C8—C15 | 114.2 (3) | H24C—C24—H24B | 109.5 |
C8—C9—C14 | 112.0 (3) | H24A—C24—H24B | 109.5 |
C8—C9—C10 | 109.6 (2) | O6—C25—O5 | 107.8 (2) |
C14—C9—C10 | 102.4 (2) | O6—C25—H25B | 110.2 |
C8—C9—H9 | 110.9 | O5—C25—H25B | 110.2 |
C14—C9—H9 | 110.9 | O6—C25—H25A | 110.2 |
C10—C9—H9 | 110.9 | O5—C25—H25A | 110.2 |
C9—C10—C12 | 102.9 (2) | H25B—C25—H25A | 108.5 |
C9—C10—C11 | 118.0 (2) | O7—C26—H26A | 109.5 |
C12—C10—C11 | 115.5 (2) | O7—C26—H26C | 109.5 |
C9—C10—H10 | 106.6 | H26A—C26—H26C | 109.5 |
C12—C10—H10 | 106.6 | O7—C26—H26B | 109.5 |
C11—C10—H10 | 106.6 | H26A—C26—H26B | 109.5 |
C17—C11—C1 | 115.6 (2) | H26C—C26—H26B | 109.5 |
C17—C11—C5 | 98.5 (2) | O8—C27—H27A | 109.5 |
C1—C11—C5 | 111.9 (3) | O8—C27—H27C | 109.5 |
C17—C11—C10 | 111.6 (2) | H27A—C27—H27C | 109.5 |
C1—C11—C10 | 108.5 (2) | O8—C27—H27B | 109.5 |
C5—C11—C10 | 110.5 (2) | H27A—C27—H27B | 109.5 |
C13—C12—C10 | 107.1 (3) | H27C—C27—H27B | 109.5 |
C13—C12—H12A | 110.3 | O9—C28—C29 | 122.4 (4) |
C10—C12—H12A | 110.3 | O9—C28—C30 | 120.2 (4) |
C13—C12—H12B | 110.3 | C29—C28—C30 | 117.4 (3) |
C10—C12—H12B | 110.3 | C28—C29—H29C | 109.5 |
H12A—C12—H12B | 108.6 | C28—C29—H29A | 109.5 |
C12—C13—C14 | 100.6 (3) | H29C—C29—H29A | 109.5 |
C12—C13—C16 | 110.7 (3) | C28—C29—H29B | 109.5 |
C14—C13—C16 | 112.6 (3) | H29C—C29—H29B | 109.5 |
C12—C13—H13 | 110.8 | H29A—C29—H29B | 109.5 |
C14—C13—H13 | 110.8 | C28—C30—H30B | 109.5 |
C16—C13—H13 | 110.8 | C28—C30—H30C | 109.5 |
O7—C14—C13 | 116.8 (3) | H30B—C30—H30C | 109.5 |
O7—C14—C9 | 111.1 (2) | C28—C30—H30A | 109.5 |
C13—C14—C9 | 101.7 (2) | H30B—C30—H30A | 109.5 |
O7—C14—H14 | 109.0 | H30C—C30—H30A | 109.5 |
C22—O1—C1—C2 | 89.7 (3) | O2—C5—C11—C1 | −72.0 (3) |
C22—O1—C1—C11 | −142.7 (3) | C6—C5—C11—C1 | 164.8 (2) |
O1—C1—C2—C3 | 165.1 (3) | C4—C5—C11—C1 | 50.8 (3) |
C11—C1—C2—C3 | 41.5 (4) | O2—C5—C11—C10 | 49.0 (3) |
C1—C2—C3—C4 | −52.8 (4) | C6—C5—C11—C10 | −74.2 (3) |
C2—C3—C4—C18 | −175.4 (3) | C4—C5—C11—C10 | 171.8 (2) |
C2—C3—C4—C19 | −55.6 (4) | C9—C10—C11—C17 | −47.6 (4) |
C2—C3—C4—C5 | 64.2 (3) | C12—C10—C11—C17 | 74.5 (3) |
C3—C4—C5—O2 | 61.2 (3) | C9—C10—C11—C1 | −176.1 (3) |
C18—C4—C5—O2 | −57.2 (4) | C12—C10—C11—C1 | −53.9 (4) |
C19—C4—C5—O2 | −176.6 (3) | C9—C10—C11—C5 | 60.9 (4) |
C3—C4—C5—C6 | −174.2 (2) | C12—C10—C11—C5 | −176.9 (3) |
C18—C4—C5—C6 | 67.4 (3) | C9—C10—C12—C13 | 3.4 (3) |
C19—C4—C5—C6 | −52.1 (3) | C11—C10—C12—C13 | −126.5 (3) |
C3—C4—C5—C11 | −62.7 (3) | C10—C12—C13—C14 | −31.9 (3) |
C18—C4—C5—C11 | 178.8 (3) | C10—C12—C13—C16 | 87.4 (3) |
C19—C4—C5—C11 | 59.4 (3) | C26—O7—C14—C13 | 68.7 (4) |
C23—O3—C6—C7 | −93.5 (3) | C26—O7—C14—C9 | −175.3 (3) |
C23—O3—C6—C5 | 146.6 (3) | C12—C13—C14—O7 | 169.9 (3) |
O2—C5—C6—O3 | −8.6 (3) | C16—C13—C14—O7 | 52.0 (4) |
C4—C5—C6—O3 | −130.9 (3) | C12—C13—C14—C9 | 48.8 (3) |
C11—C5—C6—O3 | 113.1 (3) | C16—C13—C14—C9 | −69.1 (3) |
O2—C5—C6—C7 | −136.0 (3) | C8—C9—C14—O7 | −55.1 (3) |
C4—C5—C6—C7 | 101.8 (3) | C10—C9—C14—O7 | −172.4 (2) |
C11—C5—C6—C7 | −14.2 (3) | C8—C9—C14—C13 | 69.9 (3) |
C25—O5—C7—C8 | 32.6 (3) | C10—C9—C14—C13 | −47.3 (3) |
C25—O5—C7—C17 | 153.2 (3) | O6—C8—C15—C16 | −144.4 (3) |
C25—O5—C7—C6 | −89.4 (3) | C9—C8—C15—C16 | −19.3 (4) |
O3—C6—C7—O5 | 92.7 (3) | C7—C8—C15—C16 | 108.6 (3) |
C5—C6—C7—O5 | −145.3 (2) | C27—O8—C16—C15 | 155.1 (3) |
O3—C6—C7—C8 | −21.7 (4) | C27—O8—C16—C13 | −81.3 (4) |
C5—C6—C7—C8 | 100.2 (3) | C8—C15—C16—O8 | 144.4 (3) |
O3—C6—C7—C17 | −141.8 (3) | C8—C15—C16—C13 | 20.2 (4) |
C5—C6—C7—C17 | −19.9 (3) | C12—C13—C16—O8 | 155.7 (3) |
C25—O6—C8—C9 | 159.4 (2) | C14—C13—C16—O8 | −92.6 (3) |
C25—O6—C8—C7 | 43.2 (3) | C12—C13—C16—C15 | −86.1 (3) |
C25—O6—C8—C15 | −75.1 (3) | C14—C13—C16—C15 | 25.7 (4) |
O5—C7—C8—O6 | −46.9 (3) | C19—N1—C17—C11 | −59.0 (3) |
C17—C7—C8—O6 | −171.3 (2) | C20—N1—C17—C11 | 170.3 (3) |
C6—C7—C8—O6 | 73.4 (3) | C19—N1—C17—C7 | 53.9 (4) |
O5—C7—C8—C9 | −165.0 (2) | C20—N1—C17—C7 | −76.8 (3) |
C17—C7—C8—C9 | 70.6 (3) | C1—C11—C17—N1 | −49.6 (3) |
C6—C7—C8—C9 | −44.8 (3) | C5—C11—C17—N1 | 69.7 (3) |
O5—C7—C8—C15 | 65.4 (3) | C10—C11—C17—N1 | −174.2 (2) |
C17—C7—C8—C15 | −59.0 (3) | C1—C11—C17—C7 | −174.3 (3) |
C6—C7—C8—C15 | −174.3 (3) | C5—C11—C17—C7 | −55.0 (3) |
O6—C8—C9—C14 | 94.0 (3) | C10—C11—C17—C7 | 61.2 (3) |
C7—C8—C9—C14 | −157.4 (3) | O5—C7—C17—N1 | 49.7 (4) |
C15—C8—C9—C14 | −27.6 (4) | C8—C7—C17—N1 | 165.2 (3) |
O6—C8—C9—C10 | −153.1 (2) | C6—C7—C17—N1 | −72.6 (3) |
C7—C8—C9—C10 | −44.6 (3) | O5—C7—C17—C11 | 169.0 (2) |
C15—C8—C9—C10 | 85.3 (3) | C8—C7—C17—C11 | −75.5 (3) |
C8—C9—C10—C12 | −92.5 (3) | C6—C7—C17—C11 | 46.8 (3) |
C14—C9—C10—C12 | 26.5 (3) | C17—N1—C19—C4 | 42.6 (4) |
C8—C9—C10—C11 | 35.9 (4) | C20—N1—C19—C4 | 174.0 (3) |
C14—C9—C10—C11 | 154.9 (3) | C3—C4—C19—N1 | 77.9 (3) |
O1—C1—C11—C17 | −50.8 (3) | C18—C4—C19—N1 | −162.8 (3) |
C2—C1—C11—C17 | 70.8 (4) | C5—C4—C19—N1 | −41.9 (4) |
O1—C1—C11—C5 | −162.5 (2) | C19—N1—C20—C21 | 70.1 (3) |
C2—C1—C11—C5 | −40.9 (4) | C17—N1—C20—C21 | −157.8 (3) |
O1—C1—C11—C10 | 75.3 (3) | C6—O3—C23—O4 | −2.8 (5) |
C2—C1—C11—C10 | −163.1 (3) | C6—O3—C23—C24 | 176.8 (3) |
O2—C5—C11—C17 | 165.9 (2) | C8—O6—C25—O5 | −25.3 (3) |
C6—C5—C11—C17 | 42.8 (3) | C7—O5—C25—O6 | −5.7 (3) |
C4—C5—C11—C17 | −71.3 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H2···O3 | 0.99 (5) | 2.00 (5) | 2.605 (3) | 118 (4) |
O2—H2···O9 | 0.99 (5) | 2.13 (5) | 2.936 (4) | 138 (4) |
C24—H24A···O9 | 0.98 | 2.53 | 3.427 (5) | 153 |
C25—H25A···O2i | 0.99 | 2.36 | 3.344 (4) | 170 |
Symmetry code: (i) x−1, y, z. |
Experimental details
Crystal data | |
Chemical formula | C27H41NO8·C3H6O |
Mr | 565.69 |
Crystal system, space group | Orthorhombic, P212121 |
Temperature (K) | 120 |
a, b, c (Å) | 8.4260 (8), 9.5546 (7), 35.237 (3) |
V (Å3) | 2836.8 (4) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.10 |
Crystal size (mm) | 0.42 × 0.36 × 0.21 |
Data collection | |
Diffractometer | Oxford Diffraction Xcalibur Eos |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 9839, 2930, 2690 |
Rint | 0.022 |
(sin θ/λ)max (Å−1) | 0.599 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.044, 0.104, 1.08 |
No. of reflections | 2930 |
No. of parameters | 373 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.69, −0.27 |
Computer programs: CrysAlis CCD (Oxford Diffraction, 2008), CrysAlis RED (Oxford Diffraction, 2008), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), OLEX2 (Dolomanov et al. 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H2···O3 | 0.99 (5) | 2.00 (5) | 2.605 (3) | 118 (4) |
O2—H2···O9 | 0.99 (5) | 2.13 (5) | 2.936 (4) | 138 (4) |
C24—H24A···O9 | 0.98 | 2.53 | 3.427 (5) | 153 |
C25—H25A···O2i | 0.99 | 2.36 | 3.344 (4) | 170 |
Symmetry code: (i) x−1, y, z. |
Acknowledgements
This project was supported by the Scientific Reseach Fund of Leshan Teachers' College, China (grant No. Z0975)
References
Dolomanov, O. V., Bourhis, L. J., Gildea, R. J., Howard, J. A. K. & Puschmann, H. (2009). J. Appl. Cryst. 42, 339–341. Web of Science CrossRef CAS IUCr Journals Google Scholar
He, Y., Chen, D.-L. & Wang, F.-P. (2006). Nat. Prod. Commun. 5, 357–362. Google Scholar
Oxford Diffraction (2008). CrysAlis CCD and CrysAlis RED. Oxford Diffraction Ltd, Yarnton, England. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Wang, F.-P., Chen, Q.-H. & Liu, X.-Y. (2009). The Alkaloids: Chemistry and Bioloy, Vol. 67, edited by G. A. Cordell, pp. 1–78. New York: Elsevier. Google Scholar
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The title compound, bonvalotidine A, was previously isolated from Delphinium bonvalotii Franch (He et al. 2006), and its structure was established from the NMR and MS data. In our recent investigation, it was isolation from the root of Delphinium bonvalotii Franch collected in the E'mei Mountain, Sichuan Province of P. R. China in September, 2009. A nd its crystal structure was determined. The naming conforming referred to the literature (Wang et al. 2009). The molecular structure of the title compound is shown in Fig. 1. Six-membered rings A (C1/C2/C3/C4/C5/C11) and B (C7/C8/C9/C10/C11/C17) adopt chair conformations; six-membered ring D (C8/C9/C14/C13/C16/C15) adopt a boat conformation; six-membered N-containing heterocyclic ring E (C4/C5/C11/C17/N1/C19) displays the same chair conformation; five-membered rings C (C9/C10/C12/C13/C14) and F (C5/C6/C7/C17/C11) adopt an envelope conformation. While the five-membered O-containing heterocyclic G (O5/C7/C8/O6/C25) displays an envelope conformation.
The crystal structure contains intermolecular O—H···O hydrogen bond between the hydroxyl group and carbonyl O atom. The lattice acetone molecule links with the organic molecule via O—H···O hydrogen is present in the crystal structure (Table 1).