metal-organic compounds
Bis[μ-4-(methylamino)benzoato]-κ3O,O′:O;κ3O:O,O′-bis{aqua[4-(methylamino)benzoato-κ2O,O′](nicotinamide-κN)cadmium(II)}
aDepartment of Physics, Hacettepe University, 06800 Beytepe, Ankara, Turkey, bDepartment of Chemistry, Ankara University, 06100 Tandoğan, Ankara, Turkey, cDepartment of Physics, Karabük University, 78050 Karabük, Turkey, and dDepartment of Chemistry, Kafkas University, 36100 Kars, Turkey
*Correspondence e-mail: merzifon@hacettepe.edu.tr
In the dinuclear centrosymmetric CdII compound, [Cd2(C8H8NO2)4(C6H6N2O)2(H2O)2], the metal atom is chelated by two carboxylate groups from 4-(methylamino)benzoate (PMAB) anions, and coordinated by one nicotinamide and one water molecule; a carboxylate O atom from the adjacent PMAB anion bridges to the Cd atom, completing the irregular seven-coordination geometry. In the crystal, intermolecular O—H⋯O, N—H⋯O and C—H⋯O hydrogen bonds link the molecules into a three-dimensional network. π–π contacts between the pyridine rings [centroid–centroid distance = 3.965 (1) Å] may further stabilize the structure. A weak C—H⋯π interaction also occurs.
Related literature
For niacin, see: Krishnamachari (1974). For N,N-diethylnicotinamide, see: Bigoli et al. (1972). For related structures, see: Greenaway et al. (1984); Hökelek & Necefoğlu (1996); Hökelek et al. (2009a,b,c,d, 2010).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2007); cell SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: Mercury (Macrae et al., 2006); software used to prepare material for publication: WinGX (Farrugia, 1999) and PLATON (Spek, 2009).
Supporting information
https://doi.org/10.1107/S1600536810046258/xu5083sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536810046258/xu5083Isup2.hkl
The title compound was prepared by the reaction of 3CdSO4.H2O (1.08 g, 5 mmol) in H2O (30 ml) and NA (1.22 g, 10 mmol) in H2O (20 ml) with sodium 4-(methylamino)benzoate (1.73 g, 10 mmol) in H2O (150 ml). The mixture was filtered and set aside to crystallize at ambient temperature for one week, giving colorless single crystals.
Atoms H3A, H4A (for NH), H2A, H2B (for NH2) and H61, H62 (for H2O) were located in a difference Fourier map and refined isotropically. The remaining H atoms were positioned geometrically with C—H = 0.93 and 0.96 Å for aromatic and methyl H atoms and constrained to ride on their parent atoms, with Uiso(H) = xUeq(C), where x = 1.5 for methyl H and x = 1.2 for aromatic H atoms.
As a part of our ongoing investigation on transition metal complexes of nicotinamide (NA), one form of niacin (Krishnamachari, 1974), and/or the nicotinic acid derivative N,N-diethylnicotinamide (DENA), an important respiratory stimulant (Bigoli et al., 1972), the title compound was synthesized and its
is reported herein.The title compound, (I), consists of dimeric units located around a
centre and made up of two Cd cations, four 4-methylaminobenzoate (PMAB) anions, two nicotinamide (NA) ligands and two water molecules (Fig. 1). Each Cd(II) unit is chelated by the carboxylate O atoms of the two PMAB anions, and the two monomeric units are bridged through the two oxygen atoms of the two carboxylate groups about an inversion center. The of each CdII atom is seven. The Cd1···Cd1i distance is 3.8204 (14) Å and O4-Cd1-O4i angle is 77.12 (5)° (symmetry code: (i) -x, -y, 1 - z).The average Cd-O bond length (Table 1) is 2.4013 (14) Å, and the Cd atom is displaced out of the least-squares planes of the carboxylate groups (O1/C1/O2) and (O3/C9/O4) by 0.4159 (1) and 0.4085 (1) Å, respectively. In (I), the O1-Cd1-O2 and O3-Cd1-O4 angles are 55.71 (5) and 117.52 (4) °, respectively. The corresponding O-M-O (where M is a metal) angles are 55.96 (4)° and 53.78 (4)° in [Cd2(DMAB)4(NA)2(H2O)2] (Hökelek et al., 2010), 52.91 (4)° and 53.96 (4)° in [Cd(FB)2(INA)2(H2O)].H2O (Hökelek et al., 2009a), 60.70 (4)° in [Co(DMAB)2(INA)(H2O)2] (Hökelek et al., 2009b), 58.45 (9)° in [Mn(DMAB)2(INA)(H2O)2] (Hökelek et al., 2009c), 60.03 (6)° in [Zn(MAB)2(INA)2].H2O (Hökelek et al., 2009d), 58.3 (3)° in [Zn2(DENA)2(HB)4].2H2O (Hökelek & Necefoğlu, 1996) [where NA, INA, DENA, HB, FB, MAB and DMAB are nicotinamide, isonicotinamide, N,N-diethylnicotinamide, 4-hydroxybenzoate, 4-formylbenzoate, 4-methylaminobenzoate and 4-dimethylaminobenzoate, respectively] and 55.2 (1)° in [Cu(Asp)2(py)2] (where Asp is acetylsalicylate and py is pyridine) (Greenaway et al., 1984).
The dihedral angles between the planar carboxylate groups and the adjacent benzene rings A (C2-C7) and B (C10-C15) are 9.86 (16) and 11.74 (11) °, respectively, while those between rings A, B, C (N1/C17-C21), D (Cd1/O1/O2/C1) and E (Cd1/O3/O4/C9) are A/B = 88.35 (6), A/C = 62.90 (7), B/C = 73.43 (6) and D/E = 63.44 (5)°.
In the π–π contact between the pyridine rings, Cg3—Cg3i [symmetry code: (i) 1 - x, -1 - y, 1 - z, where Cg3 is the centroid of the ring C (N3/C17-C21)] may further stabilize the structure, with centroid-centroid distance of 3.965 (1) Å. There also exists a weak C-H···π interaction (Table 2).
intermolecular O-H···O, N-H···O and C-H···O hydrogen bonds (Table 2) link the molecules into a three-dimensional network, in which they may be effective in the stabilization of the structure. TheFor niacin, see: Krishnamachari (1974). For N,N-diethylnicotinamide, see: Bigoli et al. (1972). For related structures, see: Greenaway et al. (1984); Hökelek & Necefoğlu (1996); Hökelek et al. (2009a,b,c,d, 2010).
Data collection: APEX2 (Bruker, 2007); cell
SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: Mercury (Macrae et al., 2006); software used to prepare material for publication: WinGX (Farrugia, 1999) and PLATON (Spek, 2009).Fig. 1. The molecular structure of the title compound with the atom-numbering scheme. Displacement ellipsoids are drawn at the 40% probability level. Primed atoms are generated by the symmetry operators: (') - x, - y, 1 - z. |
[Cd2(C8H8NO2)4(C6H6N2O)2(H2O)2] | Z = 1 |
Mr = 1105.72 | F(000) = 560 |
Triclinic, P1 | Dx = 1.637 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 9.5286 (2) Å | Cell parameters from 9941 reflections |
b = 10.1734 (2) Å | θ = 2.4–28.4° |
c = 13.2876 (3) Å | µ = 1.02 mm−1 |
α = 72.831 (3)° | T = 100 K |
β = 75.741 (3)° | Block, colorless |
γ = 67.172 (2)° | 0.37 × 0.26 × 0.10 mm |
V = 1121.51 (5) Å3 |
Bruker Kappa APEXII CCD area-detector diffractometer | 5581 independent reflections |
Radiation source: fine-focus sealed tube | 5250 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.023 |
φ and ω scans | θmax = 28.4°, θmin = 1.6° |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | h = −12→12 |
Tmin = 0.734, Tmax = 0.901 | k = −13→13 |
20025 measured reflections | l = −17→16 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.024 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.061 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.08 | w = 1/[σ2(Fo2) + (0.0294P)2 + 0.9733P] where P = (Fo2 + 2Fc2)/3 |
5581 reflections | (Δ/σ)max < 0.001 |
324 parameters | Δρmax = 1.77 e Å−3 |
1 restraint | Δρmin = −0.48 e Å−3 |
[Cd2(C8H8NO2)4(C6H6N2O)2(H2O)2] | γ = 67.172 (2)° |
Mr = 1105.72 | V = 1121.51 (5) Å3 |
Triclinic, P1 | Z = 1 |
a = 9.5286 (2) Å | Mo Kα radiation |
b = 10.1734 (2) Å | µ = 1.02 mm−1 |
c = 13.2876 (3) Å | T = 100 K |
α = 72.831 (3)° | 0.37 × 0.26 × 0.10 mm |
β = 75.741 (3)° |
Bruker Kappa APEXII CCD area-detector diffractometer | 5581 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 5250 reflections with I > 2σ(I) |
Tmin = 0.734, Tmax = 0.901 | Rint = 0.023 |
20025 measured reflections |
R[F2 > 2σ(F2)] = 0.024 | 1 restraint |
wR(F2) = 0.061 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.08 | Δρmax = 1.77 e Å−3 |
5581 reflections | Δρmin = −0.48 e Å−3 |
324 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cd1 | 0.183285 (14) | 0.043205 (13) | 0.484176 (10) | 0.01391 (5) | |
O1 | 0.08486 (15) | 0.16573 (15) | 0.62175 (12) | 0.0210 (3) | |
O2 | 0.32071 (15) | 0.00805 (14) | 0.62305 (11) | 0.0175 (3) | |
O3 | 0.04603 (16) | 0.29436 (15) | 0.38267 (12) | 0.0234 (3) | |
O4 | −0.01778 (15) | 0.10432 (14) | 0.39110 (11) | 0.0175 (3) | |
O5 | 0.37181 (18) | −0.60649 (17) | 0.33609 (16) | 0.0357 (4) | |
O6 | 0.37108 (16) | 0.12104 (15) | 0.36256 (12) | 0.0188 (3) | |
H61 | 0.357 (3) | 0.205 (4) | 0.357 (2) | 0.039 (8)* | |
H62 | 0.462 (4) | 0.084 (3) | 0.366 (2) | 0.042 (8)* | |
N1 | 0.32666 (17) | −0.18369 (16) | 0.44351 (13) | 0.0157 (3) | |
N2 | 0.1327 (2) | −0.4634 (2) | 0.38591 (18) | 0.0281 (4) | |
H2A | 0.071 (3) | −0.385 (3) | 0.400 (2) | 0.037 (7)* | |
H2B | 0.099 (3) | −0.528 (3) | 0.380 (2) | 0.039 (8)* | |
N3 | 0.1429 (3) | 0.0766 (2) | 1.10668 (16) | 0.0335 (4) | |
H3A | 0.051 (4) | 0.113 (4) | 1.137 (3) | 0.053 (9)* | |
N4 | −0.3405 (3) | 0.5412 (3) | −0.00800 (18) | 0.0413 (5) | |
H4A | −0.345 (5) | 0.491 (5) | −0.048 (3) | 0.100 (17)* | |
C1 | 0.2004 (2) | 0.09189 (19) | 0.66971 (15) | 0.0155 (3) | |
C2 | 0.1916 (2) | 0.0959 (2) | 0.78140 (15) | 0.0170 (3) | |
C3 | 0.0524 (2) | 0.1725 (2) | 0.83657 (17) | 0.0232 (4) | |
H3 | −0.0311 | 0.2287 | 0.8004 | 0.028* | |
C4 | 0.0371 (2) | 0.1661 (2) | 0.94354 (18) | 0.0276 (4) | |
H4 | −0.0565 | 0.2179 | 0.9785 | 0.033* | |
C5 | 0.1613 (2) | 0.0820 (2) | 1.00047 (16) | 0.0240 (4) | |
C6 | 0.3012 (2) | 0.0073 (2) | 0.94509 (17) | 0.0251 (4) | |
H6 | 0.3854 | −0.0478 | 0.9808 | 0.030* | |
C7 | 0.3151 (2) | 0.0148 (2) | 0.83732 (16) | 0.0227 (4) | |
H7 | 0.4091 | −0.0354 | 0.8017 | 0.027* | |
C8 | 0.2541 (4) | −0.0243 (3) | 1.1746 (2) | 0.0446 (6) | |
H8A | 0.2118 | −0.0199 | 1.2474 | 0.067* | |
H8B | 0.3456 | 0.0014 | 1.1554 | 0.067* | |
H8C | 0.2792 | −0.1218 | 1.1661 | 0.067* | |
C9 | −0.0265 (2) | 0.23868 (19) | 0.35120 (15) | 0.0163 (3) | |
C10 | −0.1183 (2) | 0.32451 (19) | 0.26270 (15) | 0.0171 (3) | |
C11 | −0.2098 (2) | 0.2690 (2) | 0.23138 (16) | 0.0207 (4) | |
H11 | −0.2212 | 0.1806 | 0.2710 | 0.025* | |
C12 | −0.2835 (2) | 0.3414 (2) | 0.14353 (18) | 0.0265 (4) | |
H12 | −0.3439 | 0.3015 | 0.1251 | 0.032* | |
C13 | −0.2687 (2) | 0.4745 (2) | 0.08146 (18) | 0.0288 (5) | |
C14 | −0.1827 (3) | 0.5343 (2) | 0.1148 (2) | 0.0324 (5) | |
H14 | −0.1749 | 0.6246 | 0.0769 | 0.039* | |
C15 | −0.1087 (2) | 0.4601 (2) | 0.20394 (18) | 0.0248 (4) | |
H15 | −0.0520 | 0.5016 | 0.2246 | 0.030* | |
C16 | −0.3123 (3) | 0.6668 (3) | −0.0834 (2) | 0.0487 (7) | |
H16A | −0.3610 | 0.6892 | −0.1446 | 0.073* | |
H16B | −0.2034 | 0.6454 | −0.1052 | 0.073* | |
H16C | −0.3538 | 0.7491 | −0.0506 | 0.073* | |
C17 | 0.2634 (2) | −0.26755 (19) | 0.42175 (15) | 0.0157 (3) | |
H17 | 0.1566 | −0.2411 | 0.4335 | 0.019* | |
C18 | 0.3509 (2) | −0.39229 (19) | 0.38237 (15) | 0.0164 (3) | |
C19 | 0.5101 (2) | −0.4288 (2) | 0.36180 (18) | 0.0221 (4) | |
H19 | 0.5715 | −0.5092 | 0.3328 | 0.027* | |
C20 | 0.5760 (2) | −0.3436 (2) | 0.38513 (19) | 0.0244 (4) | |
H20 | 0.6823 | −0.3663 | 0.3725 | 0.029* | |
C21 | 0.4810 (2) | −0.2241 (2) | 0.42749 (17) | 0.0193 (4) | |
H21 | 0.5258 | −0.1694 | 0.4456 | 0.023* | |
C22 | 0.2834 (2) | −0.4945 (2) | 0.36559 (16) | 0.0188 (4) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cd1 | 0.01123 (7) | 0.01258 (7) | 0.01849 (7) | −0.00263 (5) | −0.00261 (5) | −0.00593 (5) |
O1 | 0.0179 (6) | 0.0192 (6) | 0.0262 (7) | −0.0015 (5) | −0.0074 (5) | −0.0088 (6) |
O2 | 0.0140 (6) | 0.0195 (6) | 0.0188 (6) | −0.0045 (5) | −0.0017 (5) | −0.0063 (5) |
O3 | 0.0197 (7) | 0.0205 (7) | 0.0329 (8) | −0.0079 (5) | −0.0083 (6) | −0.0050 (6) |
O4 | 0.0160 (6) | 0.0144 (6) | 0.0197 (7) | −0.0047 (5) | −0.0032 (5) | −0.0003 (5) |
O5 | 0.0222 (7) | 0.0254 (8) | 0.0654 (12) | −0.0095 (6) | 0.0063 (7) | −0.0276 (8) |
O6 | 0.0144 (6) | 0.0140 (6) | 0.0246 (7) | −0.0028 (5) | −0.0022 (5) | −0.0031 (5) |
N1 | 0.0139 (7) | 0.0135 (7) | 0.0195 (8) | −0.0047 (6) | −0.0023 (6) | −0.0035 (6) |
N2 | 0.0165 (8) | 0.0182 (8) | 0.0551 (13) | −0.0045 (7) | −0.0054 (8) | −0.0178 (8) |
N3 | 0.0388 (11) | 0.0394 (11) | 0.0193 (9) | −0.0110 (9) | 0.0017 (8) | −0.0103 (8) |
N4 | 0.0413 (12) | 0.0427 (13) | 0.0295 (11) | −0.0085 (10) | −0.0138 (9) | 0.0059 (10) |
C1 | 0.0152 (8) | 0.0129 (7) | 0.0199 (9) | −0.0072 (6) | −0.0012 (7) | −0.0037 (7) |
C2 | 0.0170 (8) | 0.0171 (8) | 0.0187 (9) | −0.0080 (7) | −0.0005 (7) | −0.0054 (7) |
C3 | 0.0185 (9) | 0.0243 (9) | 0.0265 (10) | −0.0051 (7) | −0.0019 (8) | −0.0092 (8) |
C4 | 0.0214 (10) | 0.0338 (11) | 0.0274 (11) | −0.0078 (9) | 0.0038 (8) | −0.0146 (9) |
C5 | 0.0299 (10) | 0.0247 (9) | 0.0199 (10) | −0.0138 (8) | 0.0017 (8) | −0.0070 (8) |
C6 | 0.0236 (10) | 0.0280 (10) | 0.0213 (10) | −0.0049 (8) | −0.0052 (8) | −0.0060 (8) |
C7 | 0.0184 (9) | 0.0268 (10) | 0.0211 (10) | −0.0043 (8) | −0.0016 (7) | −0.0085 (8) |
C8 | 0.0619 (18) | 0.0446 (15) | 0.0201 (11) | −0.0107 (13) | −0.0055 (11) | −0.0079 (10) |
C9 | 0.0109 (8) | 0.0155 (8) | 0.0193 (9) | −0.0021 (6) | 0.0002 (6) | −0.0045 (7) |
C10 | 0.0143 (8) | 0.0138 (8) | 0.0188 (9) | −0.0019 (6) | −0.0010 (7) | −0.0024 (7) |
C11 | 0.0209 (9) | 0.0163 (8) | 0.0233 (10) | −0.0036 (7) | −0.0057 (7) | −0.0037 (7) |
C12 | 0.0258 (10) | 0.0246 (10) | 0.0279 (11) | −0.0039 (8) | −0.0096 (8) | −0.0061 (8) |
C13 | 0.0226 (10) | 0.0263 (10) | 0.0242 (10) | 0.0016 (8) | −0.0048 (8) | 0.0011 (8) |
C14 | 0.0267 (11) | 0.0198 (10) | 0.0364 (13) | −0.0050 (8) | −0.0034 (9) | 0.0093 (9) |
C15 | 0.0200 (9) | 0.0173 (9) | 0.0328 (11) | −0.0068 (7) | −0.0034 (8) | 0.0007 (8) |
C16 | 0.0348 (14) | 0.0494 (16) | 0.0388 (15) | −0.0064 (12) | −0.0058 (11) | 0.0129 (12) |
C17 | 0.0125 (8) | 0.0144 (8) | 0.0200 (9) | −0.0045 (6) | −0.0021 (6) | −0.0039 (7) |
C18 | 0.0157 (8) | 0.0123 (8) | 0.0210 (9) | −0.0056 (6) | −0.0021 (7) | −0.0029 (7) |
C19 | 0.0161 (9) | 0.0146 (8) | 0.0334 (11) | −0.0036 (7) | 0.0009 (8) | −0.0081 (8) |
C20 | 0.0118 (8) | 0.0186 (9) | 0.0414 (12) | −0.0052 (7) | 0.0001 (8) | −0.0079 (8) |
C21 | 0.0152 (8) | 0.0142 (8) | 0.0292 (10) | −0.0061 (7) | −0.0047 (7) | −0.0035 (7) |
C22 | 0.0185 (9) | 0.0140 (8) | 0.0245 (10) | −0.0058 (7) | −0.0035 (7) | −0.0046 (7) |
Cd1—N1 | 2.3265 (15) | C6—H6 | 0.9300 |
Cd1—O1 | 2.3170 (14) | C7—C6 | 1.387 (3) |
Cd1—O2 | 2.3844 (13) | C7—H7 | 0.9300 |
Cd1—O3 | 2.5099 (15) | C8—H8A | 0.9600 |
Cd1—O4 | 2.3185 (14) | C8—H8B | 0.9600 |
Cd1—O4i | 2.5625 (13) | C8—H8C | 0.9600 |
Cd1—O6 | 2.3152 (14) | C9—C10 | 1.489 (3) |
Cd1—C1 | 2.7077 (18) | C10—C11 | 1.397 (3) |
O1—C1 | 1.267 (2) | C10—C15 | 1.395 (3) |
O2—C1 | 1.276 (2) | C11—C12 | 1.376 (3) |
O3—C9 | 1.249 (2) | C11—H11 | 0.9300 |
O4—C9 | 1.289 (2) | C12—C13 | 1.402 (3) |
O5—C22 | 1.232 (2) | C12—H12 | 0.9300 |
O6—H61 | 0.80 (3) | C13—N4 | 1.381 (3) |
O6—H62 | 0.81 (3) | C13—C14 | 1.401 (4) |
N1—C17 | 1.344 (2) | C14—H14 | 0.9300 |
N1—C21 | 1.343 (2) | C15—C14 | 1.393 (3) |
N2—C22 | 1.319 (3) | C15—H15 | 0.9300 |
N2—H2A | 0.83 (3) | C16—N4 | 1.444 (3) |
N2—H2B | 0.86 (3) | C16—H16A | 0.9600 |
N3—C5 | 1.366 (3) | C16—H16B | 0.9600 |
N3—C8 | 1.439 (4) | C16—H16C | 0.9600 |
N3—H3A | 0.86 (3) | C17—C18 | 1.391 (2) |
N4—H4A | 0.86 (4) | C17—H17 | 0.9300 |
C2—C1 | 1.478 (3) | C19—C18 | 1.390 (3) |
C2—C3 | 1.400 (3) | C19—C20 | 1.385 (3) |
C2—C7 | 1.390 (3) | C19—H19 | 0.9300 |
C3—H3 | 0.9300 | C20—H20 | 0.9300 |
C4—C3 | 1.377 (3) | C21—C20 | 1.383 (3) |
C4—H4 | 0.9300 | C21—H21 | 0.9300 |
C5—C4 | 1.407 (3) | C22—C18 | 1.507 (2) |
C5—C6 | 1.399 (3) | ||
O1—Cd1—O2 | 55.71 (5) | C3—C4—H4 | 119.6 |
O1—Cd1—O3 | 80.21 (5) | C5—C4—H4 | 119.6 |
O1—Cd1—O4 | 106.64 (5) | N3—C5—C4 | 119.6 (2) |
O1—Cd1—O4i | 79.05 (5) | N3—C5—C6 | 122.2 (2) |
O1—Cd1—N1 | 143.81 (5) | C6—C5—C4 | 118.18 (19) |
O1—Cd1—C1 | 27.83 (5) | C5—C6—H6 | 119.8 |
O2—Cd1—O3 | 121.55 (5) | C7—C6—C5 | 120.5 (2) |
O2—Cd1—O4i | 91.77 (4) | C7—C6—H6 | 119.8 |
O2—Cd1—C1 | 28.12 (5) | C2—C7—H7 | 119.3 |
O3—Cd1—O4i | 117.52 (4) | C6—C7—C2 | 121.35 (18) |
O3—Cd1—C1 | 103.17 (5) | C6—C7—H7 | 119.3 |
O4—Cd1—O2 | 161.16 (5) | N3—C8—H8A | 109.5 |
O4—Cd1—O3 | 54.22 (4) | N3—C8—H8B | 109.5 |
O4—Cd1—O4i | 77.12 (5) | N3—C8—H8C | 109.5 |
O4—Cd1—N1 | 98.06 (5) | H8A—C8—H8B | 109.5 |
O4—Cd1—C1 | 133.53 (5) | H8A—C8—H8C | 109.5 |
O4i—Cd1—C1 | 82.17 (5) | H8B—C8—H8C | 109.5 |
O6—Cd1—O1 | 112.54 (5) | O3—C9—O4 | 120.79 (17) |
O6—Cd1—O2 | 88.69 (5) | O3—C9—C10 | 120.31 (17) |
O6—Cd1—O3 | 73.74 (5) | O4—C9—C10 | 118.82 (16) |
O6—Cd1—O4 | 105.81 (5) | C11—C10—C9 | 121.45 (17) |
O6—Cd1—O4i | 165.88 (5) | C15—C10—C9 | 120.91 (18) |
O6—Cd1—N1 | 84.67 (5) | C15—C10—C11 | 117.54 (18) |
O6—Cd1—C1 | 104.26 (5) | C10—C11—H11 | 119.1 |
N1—Cd1—O2 | 95.16 (5) | C12—C11—C10 | 121.82 (19) |
N1—Cd1—O3 | 135.97 (5) | C12—C11—H11 | 119.1 |
N1—Cd1—O4i | 81.23 (5) | C11—C12—C13 | 120.8 (2) |
N1—Cd1—C1 | 119.34 (6) | C11—C12—H12 | 119.6 |
C1—O1—Cd1 | 93.51 (11) | C13—C12—H12 | 119.6 |
C1—O2—Cd1 | 90.17 (11) | N4—C13—C12 | 119.0 (2) |
C9—O3—Cd1 | 88.13 (11) | N4—C13—C14 | 123.2 (2) |
Cd1—O4—Cd1i | 102.88 (5) | C14—C13—C12 | 117.8 (2) |
C9—O4—Cd1 | 95.93 (11) | C13—C14—H14 | 119.6 |
C9—O4—Cd1i | 139.46 (11) | C15—C14—C13 | 120.8 (2) |
Cd1—O6—H61 | 113 (2) | C15—C14—H14 | 119.6 |
Cd1—O6—H62 | 124 (2) | C10—C15—H15 | 119.5 |
H61—O6—H62 | 102 (3) | C14—C15—C10 | 121.1 (2) |
C17—N1—Cd1 | 123.06 (12) | C14—C15—H15 | 119.5 |
C21—N1—Cd1 | 118.29 (12) | N4—C16—H16A | 109.5 |
C21—N1—C17 | 118.08 (15) | N4—C16—H16B | 109.5 |
C22—N2—H2A | 123 (2) | N4—C16—H16C | 109.5 |
C22—N2—H2B | 116.2 (19) | H16A—C16—H16B | 109.5 |
H2A—N2—H2B | 120 (3) | H16A—C16—H16C | 109.5 |
C5—N3—C8 | 123.2 (2) | H16B—C16—H16C | 109.5 |
C5—N3—H3A | 117 (2) | N1—C17—C18 | 122.70 (16) |
C8—N3—H3A | 117 (2) | N1—C17—H17 | 118.6 |
C13—N4—C16 | 121.7 (2) | C18—C17—H17 | 118.6 |
C13—N4—H4A | 122 (3) | C17—C18—C22 | 123.63 (16) |
C16—N4—H4A | 103 (3) | C19—C18—C17 | 118.41 (17) |
O1—C1—Cd1 | 58.66 (9) | C19—C18—C22 | 117.89 (16) |
O1—C1—O2 | 119.58 (17) | C18—C19—H19 | 120.5 |
O1—C1—C2 | 119.89 (16) | C20—C19—C18 | 119.07 (17) |
O2—C1—Cd1 | 61.71 (10) | C20—C19—H19 | 120.5 |
O2—C1—C2 | 120.41 (17) | C19—C20—H20 | 120.6 |
C2—C1—Cd1 | 167.59 (12) | C21—C20—C19 | 118.87 (17) |
C3—C2—C1 | 120.01 (17) | C21—C20—H20 | 120.6 |
C7—C2—C1 | 121.66 (17) | N1—C21—C20 | 122.78 (17) |
C7—C2—C3 | 118.10 (18) | N1—C21—H21 | 118.6 |
C2—C3—H3 | 119.4 | C20—C21—H21 | 118.6 |
C4—C3—C2 | 121.1 (2) | O5—C22—N2 | 122.37 (18) |
C4—C3—H3 | 119.4 | O5—C22—C18 | 118.50 (17) |
C3—C4—C5 | 120.76 (19) | N2—C22—C18 | 119.10 (16) |
O2—Cd1—O1—C1 | −5.82 (10) | O6—Cd1—C1—C2 | −161.5 (6) |
O3—Cd1—O1—C1 | −145.30 (11) | N1—Cd1—C1—O1 | −156.66 (10) |
O4—Cd1—O1—C1 | 166.82 (10) | N1—Cd1—C1—O2 | 33.58 (12) |
O4i—Cd1—O1—C1 | 93.97 (11) | N1—Cd1—C1—C2 | −69.7 (6) |
O6—Cd1—O1—C1 | −77.59 (11) | Cd1—O1—C1—O2 | 10.37 (17) |
N1—Cd1—O1—C1 | 35.80 (15) | Cd1—O1—C1—C2 | −165.67 (14) |
O1—Cd1—O2—C1 | 5.76 (10) | Cd1—O2—C1—O1 | −10.05 (16) |
O3—Cd1—O2—C1 | 54.46 (11) | Cd1—O2—C1—C2 | 165.96 (14) |
O4—Cd1—O2—C1 | −16.57 (19) | Cd1—O3—C9—O4 | 9.37 (17) |
O4i—Cd1—O2—C1 | −69.69 (10) | Cd1—O3—C9—C10 | −167.39 (15) |
O6—Cd1—O2—C1 | 124.42 (10) | Cd1—O4—C9—O3 | −10.20 (18) |
N1—Cd1—O2—C1 | −151.05 (10) | Cd1i—O4—C9—O3 | 107.6 (2) |
O1—Cd1—O3—C9 | −124.35 (11) | Cd1—O4—C9—C10 | 166.61 (13) |
O2—Cd1—O3—C9 | −163.39 (10) | Cd1i—O4—C9—C10 | −75.6 (2) |
O4—Cd1—O3—C9 | −5.50 (10) | Cd1—N1—C17—C18 | 170.27 (14) |
O4i—Cd1—O3—C9 | −52.25 (12) | C21—N1—C17—C18 | −0.8 (3) |
O6—Cd1—O3—C9 | 118.55 (11) | Cd1—N1—C21—C20 | −168.42 (16) |
N1—Cd1—O3—C9 | 54.71 (13) | C17—N1—C21—C20 | 3.1 (3) |
C1—Cd1—O3—C9 | −140.19 (11) | C8—N3—C5—C4 | 169.5 (2) |
O1—Cd1—O4—Cd1i | −74.23 (6) | C8—N3—C5—C6 | −11.1 (4) |
O1—Cd1—O4—C9 | 69.63 (11) | C3—C2—C1—Cd1 | −75.0 (6) |
O2—Cd1—O4—Cd1i | −55.11 (15) | C3—C2—C1—O1 | 4.7 (3) |
O2—Cd1—O4—C9 | 88.75 (17) | C3—C2—C1—O2 | −171.30 (17) |
O3—Cd1—O4—Cd1i | −138.50 (7) | C7—C2—C1—Cd1 | 99.4 (6) |
O3—Cd1—O4—C9 | 5.36 (10) | C7—C2—C1—O1 | 179.06 (17) |
O4i—Cd1—O4—Cd1i | 0.0 | C7—C2—C1—O2 | 3.1 (3) |
O4i—Cd1—O4—C9 | 143.86 (12) | C1—C2—C3—C4 | 173.52 (18) |
O6—Cd1—O4—Cd1i | 165.74 (5) | C7—C2—C3—C4 | −1.0 (3) |
O6—Cd1—O4—C9 | −50.40 (11) | C1—C2—C7—C6 | −173.35 (18) |
N1—Cd1—O4—Cd1i | 79.03 (5) | C3—C2—C7—C6 | 1.1 (3) |
N1—Cd1—O4—C9 | −137.11 (11) | C5—C4—C3—C2 | 0.0 (3) |
C1—Cd1—O4—Cd1i | −65.79 (7) | N3—C5—C4—C3 | −179.5 (2) |
C1—Cd1—O4—C9 | 78.07 (12) | C6—C5—C4—C3 | 1.0 (3) |
O1—Cd1—N1—C17 | 105.36 (15) | N3—C5—C6—C7 | 179.6 (2) |
O1—Cd1—N1—C21 | −83.55 (16) | C4—C5—C6—C7 | −1.0 (3) |
O2—Cd1—N1—C17 | 138.80 (14) | C2—C7—C6—C5 | −0.1 (3) |
O2—Cd1—N1—C21 | −50.11 (15) | O3—C9—C10—C11 | −175.08 (17) |
O3—Cd1—N1—C17 | −73.07 (16) | O3—C9—C10—C15 | 8.7 (3) |
O3—Cd1—N1—C21 | 98.02 (15) | O4—C9—C10—C11 | 8.1 (3) |
O4—Cd1—N1—C17 | −27.75 (15) | O4—C9—C10—C15 | −168.09 (17) |
O4i—Cd1—N1—C17 | 47.80 (14) | C9—C10—C11—C12 | −173.83 (18) |
O4—Cd1—N1—C21 | 143.34 (14) | C15—C10—C11—C12 | 2.5 (3) |
O4i—Cd1—N1—C21 | −141.11 (15) | C9—C10—C15—C14 | 173.80 (19) |
O6—Cd1—N1—C17 | −133.01 (15) | C11—C10—C15—C14 | −2.5 (3) |
O6—Cd1—N1—C21 | 38.08 (14) | C10—C11—C12—C13 | 0.3 (3) |
C1—Cd1—N1—C17 | 123.62 (14) | C11—C12—C13—N4 | 177.9 (2) |
C1—Cd1—N1—C21 | −65.29 (15) | C11—C12—C13—C14 | −3.0 (3) |
O1—Cd1—C1—O2 | −169.76 (17) | C12—C13—N4—C16 | −171.1 (2) |
O1—Cd1—C1—C2 | 87.0 (6) | C14—C13—N4—C16 | 9.9 (4) |
O2—Cd1—C1—O1 | 169.76 (17) | N4—C13—C14—C15 | −178.1 (2) |
O2—Cd1—C1—C2 | −103.2 (6) | C12—C13—C14—C15 | 2.9 (3) |
O3—Cd1—C1—O1 | 35.18 (11) | C10—C15—C14—C13 | −0.1 (3) |
O3—Cd1—C1—O2 | −134.59 (10) | N1—C17—C18—C19 | −2.0 (3) |
O3—Cd1—C1—C2 | 122.2 (6) | N1—C17—C18—C22 | 174.98 (18) |
O4—Cd1—C1—O1 | −17.53 (13) | C20—C19—C18—C17 | 2.6 (3) |
O4i—Cd1—C1—O1 | −81.36 (11) | C20—C19—C18—C22 | −174.56 (19) |
O4—Cd1—C1—O2 | 172.70 (9) | C18—C19—C20—C21 | −0.5 (3) |
O4i—Cd1—C1—O2 | 108.88 (10) | N1—C21—C20—C19 | −2.5 (3) |
O4—Cd1—C1—C2 | 69.5 (6) | O5—C22—C18—C17 | −175.9 (2) |
O4i—Cd1—C1—C2 | 5.6 (6) | O5—C22—C18—C19 | 1.1 (3) |
O6—Cd1—C1—O1 | 111.46 (11) | N2—C22—C18—C17 | 2.1 (3) |
O6—Cd1—C1—O2 | −58.31 (11) | N2—C22—C18—C19 | 179.1 (2) |
Symmetry code: (i) −x, −y, −z+1. |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2A···O1i | 0.83 (3) | 2.13 (3) | 2.921 (2) | 160 (2) |
N2—H2B···O3ii | 0.86 (3) | 2.05 (3) | 2.901 (3) | 170 (3) |
O6—H61···O5iii | 0.79 (4) | 1.91 (4) | 2.692 (2) | 167 (3) |
O6—H62···O2iv | 0.81 (4) | 1.94 (4) | 2.743 (2) | 179 (3) |
C11—H11···O2i | 0.93 | 2.39 | 3.299 (2) | 165 |
C17—H17···O1i | 0.93 | 2.36 | 3.216 (3) | 153 |
C21—H21···O2iv | 0.93 | 2.45 | 3.252 (3) | 145 |
C19—H19···Cg3v | 0.93 | 2.74 | 3.537 (2) | 144 |
Symmetry codes: (i) −x, −y, −z+1; (ii) x, y−1, z; (iii) x, y+1, z; (iv) −x+1, −y, −z+1; (v) x+1, y−1, z. |
Experimental details
Crystal data | |
Chemical formula | [Cd2(C8H8NO2)4(C6H6N2O)2(H2O)2] |
Mr | 1105.72 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 100 |
a, b, c (Å) | 9.5286 (2), 10.1734 (2), 13.2876 (3) |
α, β, γ (°) | 72.831 (3), 75.741 (3), 67.172 (2) |
V (Å3) | 1121.51 (5) |
Z | 1 |
Radiation type | Mo Kα |
µ (mm−1) | 1.02 |
Crystal size (mm) | 0.37 × 0.26 × 0.10 |
Data collection | |
Diffractometer | Bruker Kappa APEXII CCD area-detector |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.734, 0.901 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 20025, 5581, 5250 |
Rint | 0.023 |
(sin θ/λ)max (Å−1) | 0.669 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.024, 0.061, 1.08 |
No. of reflections | 5581 |
No. of parameters | 324 |
No. of restraints | 1 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 1.77, −0.48 |
Computer programs: APEX2 (Bruker, 2007), SAINT (Bruker, 2007), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), Mercury (Macrae et al., 2006), WinGX (Farrugia, 1999) and PLATON (Spek, 2009).
Cd1—N1 | 2.3265 (15) | Cd1—O4 | 2.3185 (14) |
Cd1—O1 | 2.3170 (14) | Cd1—O4i | 2.5625 (13) |
Cd1—O2 | 2.3844 (13) | Cd1—O6 | 2.3152 (14) |
Cd1—O3 | 2.5099 (15) |
Symmetry code: (i) −x, −y, −z+1. |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2A···O1i | 0.83 (3) | 2.13 (3) | 2.921 (2) | 160 (2) |
N2—H2B···O3ii | 0.86 (3) | 2.05 (3) | 2.901 (3) | 170 (3) |
O6—H61···O5iii | 0.79 (4) | 1.91 (4) | 2.692 (2) | 167 (3) |
O6—H62···O2iv | 0.81 (4) | 1.94 (4) | 2.743 (2) | 179 (3) |
C11—H11···O2i | 0.93 | 2.39 | 3.299 (2) | 165 |
C17—H17···O1i | 0.93 | 2.36 | 3.216 (3) | 153 |
C21—H21···O2iv | 0.93 | 2.45 | 3.252 (3) | 145 |
C19—H19···Cg3v | 0.93 | 2.74 | 3.537 (2) | 144 |
Symmetry codes: (i) −x, −y, −z+1; (ii) x, y−1, z; (iii) x, y+1, z; (iv) −x+1, −y, −z+1; (v) x+1, y−1, z. |
Acknowledgements
The authors are indebted to Anadolu University and the Medicinal Plants and Medicine Research Centre of Anadolu University, Eskişehir, Turkey, for the use of X-ray diffractometer. This work was supported financially by Kafkas University Research Fund (grant No. 2009-FEF-03).
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
As a part of our ongoing investigation on transition metal complexes of nicotinamide (NA), one form of niacin (Krishnamachari, 1974), and/or the nicotinic acid derivative N,N-diethylnicotinamide (DENA), an important respiratory stimulant (Bigoli et al., 1972), the title compound was synthesized and its crystal structure is reported herein.
The title compound, (I), consists of dimeric units located around a crystallographic symmetry centre and made up of two Cd cations, four 4-methylaminobenzoate (PMAB) anions, two nicotinamide (NA) ligands and two water molecules (Fig. 1). Each Cd(II) unit is chelated by the carboxylate O atoms of the two PMAB anions, and the two monomeric units are bridged through the two oxygen atoms of the two carboxylate groups about an inversion center. The coordination number of each CdII atom is seven. The Cd1···Cd1i distance is 3.8204 (14) Å and O4-Cd1-O4i angle is 77.12 (5)° (symmetry code: (i) -x, -y, 1 - z).
The average Cd-O bond length (Table 1) is 2.4013 (14) Å, and the Cd atom is displaced out of the least-squares planes of the carboxylate groups (O1/C1/O2) and (O3/C9/O4) by 0.4159 (1) and 0.4085 (1) Å, respectively. In (I), the O1-Cd1-O2 and O3-Cd1-O4 angles are 55.71 (5) and 117.52 (4) °, respectively. The corresponding O-M-O (where M is a metal) angles are 55.96 (4)° and 53.78 (4)° in [Cd2(DMAB)4(NA)2(H2O)2] (Hökelek et al., 2010), 52.91 (4)° and 53.96 (4)° in [Cd(FB)2(INA)2(H2O)].H2O (Hökelek et al., 2009a), 60.70 (4)° in [Co(DMAB)2(INA)(H2O)2] (Hökelek et al., 2009b), 58.45 (9)° in [Mn(DMAB)2(INA)(H2O)2] (Hökelek et al., 2009c), 60.03 (6)° in [Zn(MAB)2(INA)2].H2O (Hökelek et al., 2009d), 58.3 (3)° in [Zn2(DENA)2(HB)4].2H2O (Hökelek & Necefoğlu, 1996) [where NA, INA, DENA, HB, FB, MAB and DMAB are nicotinamide, isonicotinamide, N,N-diethylnicotinamide, 4-hydroxybenzoate, 4-formylbenzoate, 4-methylaminobenzoate and 4-dimethylaminobenzoate, respectively] and 55.2 (1)° in [Cu(Asp)2(py)2] (where Asp is acetylsalicylate and py is pyridine) (Greenaway et al., 1984).
The dihedral angles between the planar carboxylate groups and the adjacent benzene rings A (C2-C7) and B (C10-C15) are 9.86 (16) and 11.74 (11) °, respectively, while those between rings A, B, C (N1/C17-C21), D (Cd1/O1/O2/C1) and E (Cd1/O3/O4/C9) are A/B = 88.35 (6), A/C = 62.90 (7), B/C = 73.43 (6) and D/E = 63.44 (5)°.
In the crystal structure, intermolecular O-H···O, N-H···O and C-H···O hydrogen bonds (Table 2) link the molecules into a three-dimensional network, in which they may be effective in the stabilization of the structure. The π–π contact between the pyridine rings, Cg3—Cg3i [symmetry code: (i) 1 - x, -1 - y, 1 - z, where Cg3 is the centroid of the ring C (N3/C17-C21)] may further stabilize the structure, with centroid-centroid distance of 3.965 (1) Å. There also exists a weak C-H···π interaction (Table 2).