metal-organic compounds
{2-Morpholino-N-[1-(2-pyridyl)ethylidene]ethanamine-κ3N,N′,N′′}bis(thiocyanato-κN)zinc(II)
aDepartment of Chemistry, University of Malaya, 50603 Kuala Lumpur, Malaysia
*Correspondence e-mail: khaledi@siswa.um.edu.my
The 2(C13H19N3O)], contains two crystallographically independent molecules. In each molecule, the ZnII ion is five-coordinated by the N,N′,N"-tridentate Schiff base and the N atoms of two thiocyanate ligands in a distorted square-pyramidal geometry. The two molecules differ mainly in the deviations from the ideal geometry, with τ values of 0.14 and 0.33. In the crystal, intermolecular C—H⋯S hydrogen bonds are observed. An intramolecular C—H⋯N hydrogen bond occurs in one of the independent molecules.
of the title compound, [Zn(NCS)Related literature
For the crystal structures of similar zinc complexes, see: Cai (2009); Chen et al. (2005). For a description of the geometry of complexes with five-coordinate metal atoms, see: Addison et al. (1984).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2007); cell SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: SHELXL97 and publCIF (Westrip, 2010).
Supporting information
10.1107/S1600536810053778/vm2068sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536810053778/vm2068Isup2.hkl
A mixture of 2-acetylpyridine (0.20 g, 1.65 mmol) and 4-(2-aminoethyl)morpholine (0.21 g, 1.65 mmol) in ethanol (20 ml) was refluxed for 2 hr followed by addition of a solution of zinc(II) acetate dihydrate (0.36 g, 1.65 mmol) and sodium thiocyanate (0.134 g, 1.65 mmol) in a minimum amount of water. The resulting solution was refluxed for 30 min, then left at room temperature. The crystals of the title complex were obtained in a few days.
The hydrogen atoms were placed at calculated positions (H—CAr = 0.95 Å; H—CMethyl = 0.98 Å; H—CMethylene = 0.99 Å) and were treated as riding on their parent atoms with U(H) set to 1.2–1.5 Ueq(C). Additional rigid-bond type restraints (DELU in SHELXL97) were placed on the displacement parameters of S1 and C14; S2 and C15; S3 and C29; S4 and C30; N10 and C3.
Data collection: APEX2 (Bruker, 2007); cell
SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008) and publCIF (Westrip, 2010).Fig. 1. Thermal ellipsoid plot of the title compound at the 30% probability level. Hydrogen atoms have been omitted for clarity. |
[Zn(NCS)2(C13H19N3O)] | Z = 4 |
Mr = 414.84 | F(000) = 856 |
Triclinic, P1 | Dx = 1.517 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 9.9203 (2) Å | Cell parameters from 7261 reflections |
b = 13.5659 (2) Å | θ = 2.5–30.5° |
c = 14.6957 (2) Å | µ = 1.59 mm−1 |
α = 112.702 (1)° | T = 100 K |
β = 91.471 (1)° | Block, yellow |
γ = 94.356 (1)° | 0.42 × 0.33 × 0.25 mm |
V = 1815.97 (5) Å3 |
Bruker APEXII CCD diffractometer | 7111 independent reflections |
Radiation source: fine-focus sealed tube | 6171 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.020 |
ϕ and ω scans | θmax = 26.0°, θmin = 2.1° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −12→12 |
Tmin = 0.554, Tmax = 0.691 | k = −16→16 |
15347 measured reflections | l = −17→18 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.027 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.072 | H-atom parameters constrained |
S = 1.02 | w = 1/[σ2(Fo2) + (0.0368P)2 + 0.8172P] where P = (Fo2 + 2Fc2)/3 |
7111 reflections | (Δ/σ)max = 0.001 |
435 parameters | Δρmax = 0.63 e Å−3 |
5 restraints | Δρmin = −0.27 e Å−3 |
[Zn(NCS)2(C13H19N3O)] | γ = 94.356 (1)° |
Mr = 414.84 | V = 1815.97 (5) Å3 |
Triclinic, P1 | Z = 4 |
a = 9.9203 (2) Å | Mo Kα radiation |
b = 13.5659 (2) Å | µ = 1.59 mm−1 |
c = 14.6957 (2) Å | T = 100 K |
α = 112.702 (1)° | 0.42 × 0.33 × 0.25 mm |
β = 91.471 (1)° |
Bruker APEXII CCD diffractometer | 7111 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 6171 reflections with I > 2σ(I) |
Tmin = 0.554, Tmax = 0.691 | Rint = 0.020 |
15347 measured reflections |
R[F2 > 2σ(F2)] = 0.027 | 5 restraints |
wR(F2) = 0.072 | H-atom parameters constrained |
S = 1.02 | Δρmax = 0.63 e Å−3 |
7111 reflections | Δρmin = −0.27 e Å−3 |
435 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Zn1 | 0.19481 (2) | 0.410155 (19) | 0.190924 (17) | 0.01900 (7) | |
S1 | 0.18204 (6) | 0.44706 (5) | 0.52312 (4) | 0.03297 (15) | |
S2 | 0.49821 (6) | 0.67240 (5) | 0.15470 (4) | 0.02846 (13) | |
O1 | 0.49220 (16) | 0.27533 (15) | 0.32934 (13) | 0.0348 (4) | |
N1 | −0.00833 (17) | 0.43646 (14) | 0.15397 (12) | 0.0199 (4) | |
N2 | 0.15687 (17) | 0.30747 (14) | 0.04303 (12) | 0.0203 (4) | |
N3 | 0.37745 (17) | 0.31359 (15) | 0.16386 (13) | 0.0220 (4) | |
N4 | 0.15900 (18) | 0.42921 (16) | 0.32803 (13) | 0.0258 (4) | |
C1 | −0.0848 (2) | 0.50901 (18) | 0.21249 (16) | 0.0250 (5) | |
H1 | −0.0550 | 0.5474 | 0.2799 | 0.030* | |
C2 | −0.2065 (2) | 0.53031 (19) | 0.17825 (18) | 0.0295 (5) | |
H2 | −0.2585 | 0.5832 | 0.2213 | 0.035* | |
C3 | −0.2508 (2) | 0.47373 (19) | 0.08096 (17) | 0.0292 (5) | |
H3 | −0.3335 | 0.4873 | 0.0559 | 0.035* | |
C4 | −0.1727 (2) | 0.39631 (19) | 0.01981 (17) | 0.0257 (5) | |
H4 | −0.2022 | 0.3550 | −0.0472 | 0.031* | |
C5 | −0.0514 (2) | 0.38077 (17) | 0.05858 (15) | 0.0203 (4) | |
C6 | 0.0427 (2) | 0.30383 (17) | −0.00108 (15) | 0.0207 (4) | |
C7 | −0.0008 (2) | 0.2307 (2) | −0.10502 (16) | 0.0303 (5) | |
H7A | 0.0643 | 0.1770 | −0.1305 | 0.045* | |
H7B | −0.0046 | 0.2726 | −0.1462 | 0.045* | |
H7C | −0.0906 | 0.1945 | −0.1065 | 0.045* | |
C8 | 0.2657 (2) | 0.24304 (18) | −0.00450 (16) | 0.0251 (5) | |
H8A | 0.2741 | 0.2412 | −0.0721 | 0.030* | |
H8B | 0.2468 | 0.1685 | −0.0090 | 0.030* | |
C9 | 0.3955 (2) | 0.29495 (19) | 0.05839 (16) | 0.0260 (5) | |
H9A | 0.4692 | 0.2479 | 0.0337 | 0.031* | |
H9B | 0.4218 | 0.3642 | 0.0529 | 0.031* | |
C10 | 0.3596 (2) | 0.20758 (18) | 0.17256 (17) | 0.0258 (5) | |
H10A | 0.4307 | 0.1628 | 0.1369 | 0.031* | |
H10B | 0.2706 | 0.1705 | 0.1409 | 0.031* | |
C11 | 0.3674 (2) | 0.2191 (2) | 0.27917 (17) | 0.0292 (5) | |
H11A | 0.2912 | 0.2582 | 0.3134 | 0.035* | |
H11B | 0.3584 | 0.1469 | 0.2815 | 0.035* | |
C12 | 0.5035 (2) | 0.3799 (2) | 0.32699 (18) | 0.0331 (6) | |
H12A | 0.5884 | 0.4205 | 0.3637 | 0.040* | |
H12B | 0.4266 | 0.4192 | 0.3599 | 0.040* | |
C13 | 0.5035 (2) | 0.3728 (2) | 0.22158 (18) | 0.0290 (5) | |
H13A | 0.5125 | 0.4461 | 0.2219 | 0.035* | |
H13B | 0.5823 | 0.3359 | 0.1896 | 0.035* | |
C14 | 0.1676 (2) | 0.43803 (17) | 0.41001 (16) | 0.0214 (4) | |
C15 | 0.3793 (2) | 0.59693 (16) | 0.17611 (15) | 0.0194 (4) | |
Zn2 | 0.30417 (2) | 0.953591 (19) | 0.691039 (17) | 0.01820 (7) | |
S3 | 0.65029 (6) | 1.07952 (5) | 0.92910 (4) | 0.03050 (14) | |
S4 | 0.05616 (6) | 1.21315 (5) | 0.63775 (4) | 0.02613 (13) | |
O2 | 0.06613 (17) | 0.85681 (14) | 0.89498 (12) | 0.0358 (4) | |
N5 | 0.29418 (19) | 0.54316 (15) | 0.19158 (14) | 0.0279 (4) | |
N6 | 0.49783 (18) | 0.98236 (14) | 0.63008 (13) | 0.0220 (4) | |
N7 | 0.31286 (18) | 0.82075 (14) | 0.56062 (12) | 0.0213 (4) | |
N8 | 0.12340 (17) | 0.84559 (14) | 0.69974 (13) | 0.0222 (4) | |
N9 | 0.40186 (18) | 1.00133 (15) | 0.82261 (13) | 0.0241 (4) | |
N10 | 0.19805 (19) | 1.06809 (15) | 0.68484 (14) | 0.0261 (4) | |
C16 | 0.5889 (2) | 1.06648 (18) | 0.67001 (16) | 0.0268 (5) | |
H16 | 0.5638 | 1.1284 | 0.7224 | 0.032* | |
C17 | 0.7190 (2) | 1.0676 (2) | 0.63832 (17) | 0.0301 (5) | |
H17 | 0.7814 | 1.1295 | 0.6675 | 0.036* | |
C18 | 0.7562 (2) | 0.9774 (2) | 0.56381 (17) | 0.0333 (6) | |
H18 | 0.8453 | 0.9755 | 0.5415 | 0.040* | |
C19 | 0.6615 (2) | 0.8887 (2) | 0.52143 (17) | 0.0304 (5) | |
H19 | 0.6847 | 0.8256 | 0.4695 | 0.036* | |
C20 | 0.5332 (2) | 0.89417 (17) | 0.55625 (15) | 0.0215 (4) | |
C21 | 0.4233 (2) | 0.80383 (18) | 0.51743 (15) | 0.0232 (5) | |
C22 | 0.4504 (3) | 0.7028 (2) | 0.43377 (17) | 0.0346 (6) | |
H22A | 0.3674 | 0.6537 | 0.4134 | 0.052* | |
H22B | 0.5214 | 0.6686 | 0.4551 | 0.052* | |
H22C | 0.4801 | 0.7197 | 0.3780 | 0.052* | |
C23 | 0.1933 (2) | 0.74271 (18) | 0.53134 (16) | 0.0274 (5) | |
H23A | 0.2126 | 0.6777 | 0.5428 | 0.033* | |
H23B | 0.1678 | 0.7213 | 0.4603 | 0.033* | |
C24 | 0.0797 (2) | 0.79550 (19) | 0.59319 (16) | 0.0279 (5) | |
H24A | 0.0490 | 0.8511 | 0.5714 | 0.033* | |
H24B | 0.0022 | 0.7411 | 0.5831 | 0.033* | |
C25 | 0.0097 (2) | 0.9010 (2) | 0.75502 (17) | 0.0299 (5) | |
H25A | −0.0732 | 0.8505 | 0.7369 | 0.036* | |
H25B | −0.0076 | 0.9618 | 0.7362 | 0.036* | |
C26 | 0.0408 (3) | 0.9423 (2) | 0.86506 (18) | 0.0344 (6) | |
H26A | 0.1213 | 0.9954 | 0.8837 | 0.041* | |
H26B | −0.0366 | 0.9789 | 0.8999 | 0.041* | |
C27 | 0.1808 (2) | 0.8079 (2) | 0.84673 (17) | 0.0297 (5) | |
H27A | 0.2018 | 0.7504 | 0.8690 | 0.036* | |
H27B | 0.2601 | 0.8621 | 0.8656 | 0.036* | |
C28 | 0.1563 (2) | 0.76110 (18) | 0.73578 (16) | 0.0257 (5) | |
H28A | 0.2382 | 0.7286 | 0.7048 | 0.031* | |
H28B | 0.0805 | 0.7038 | 0.7163 | 0.031* | |
C29 | 0.5052 (2) | 1.03434 (17) | 0.86717 (15) | 0.0221 (4) | |
C30 | 0.1385 (2) | 1.12873 (17) | 0.66588 (15) | 0.0195 (4) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Zn1 | 0.01919 (13) | 0.02094 (13) | 0.01724 (13) | −0.00064 (10) | −0.00103 (9) | 0.00842 (10) |
S1 | 0.0416 (3) | 0.0372 (3) | 0.0187 (3) | −0.0095 (3) | −0.0067 (2) | 0.0122 (2) |
S2 | 0.0309 (3) | 0.0258 (3) | 0.0314 (3) | 0.0019 (2) | 0.0092 (2) | 0.0139 (2) |
O1 | 0.0272 (9) | 0.0481 (11) | 0.0368 (10) | 0.0044 (8) | −0.0064 (7) | 0.0254 (9) |
N1 | 0.0206 (9) | 0.0204 (9) | 0.0189 (9) | −0.0010 (7) | −0.0006 (7) | 0.0085 (7) |
N2 | 0.0224 (9) | 0.0217 (9) | 0.0178 (9) | 0.0009 (7) | 0.0016 (7) | 0.0090 (7) |
N3 | 0.0185 (9) | 0.0266 (10) | 0.0238 (9) | 0.0001 (7) | −0.0003 (7) | 0.0135 (8) |
N4 | 0.0226 (9) | 0.0338 (11) | 0.0218 (10) | 0.0031 (8) | 0.0016 (8) | 0.0115 (8) |
C1 | 0.0268 (11) | 0.0226 (11) | 0.0227 (11) | 0.0014 (9) | 0.0001 (9) | 0.0060 (9) |
C2 | 0.0265 (12) | 0.0270 (12) | 0.0325 (13) | 0.0050 (10) | 0.0035 (10) | 0.0085 (10) |
C3 | 0.0220 (11) | 0.0356 (13) | 0.0326 (13) | 0.0024 (10) | −0.0024 (10) | 0.0166 (11) |
C4 | 0.0235 (11) | 0.0305 (12) | 0.0233 (11) | −0.0014 (9) | −0.0034 (9) | 0.0116 (10) |
C5 | 0.0202 (10) | 0.0220 (11) | 0.0201 (11) | −0.0032 (8) | −0.0008 (8) | 0.0107 (9) |
C6 | 0.0233 (11) | 0.0231 (11) | 0.0176 (10) | −0.0007 (9) | 0.0018 (8) | 0.0104 (9) |
C7 | 0.0302 (12) | 0.0398 (14) | 0.0171 (11) | 0.0030 (11) | −0.0005 (9) | 0.0070 (10) |
C8 | 0.0259 (11) | 0.0291 (12) | 0.0205 (11) | 0.0062 (9) | 0.0045 (9) | 0.0091 (9) |
C9 | 0.0231 (11) | 0.0328 (13) | 0.0259 (12) | 0.0058 (9) | 0.0059 (9) | 0.0146 (10) |
C10 | 0.0236 (11) | 0.0276 (12) | 0.0301 (12) | 0.0033 (9) | 0.0014 (9) | 0.0154 (10) |
C11 | 0.0285 (12) | 0.0334 (13) | 0.0335 (13) | 0.0038 (10) | 0.0003 (10) | 0.0216 (11) |
C12 | 0.0208 (11) | 0.0426 (15) | 0.0356 (14) | −0.0012 (10) | −0.0070 (10) | 0.0163 (12) |
C13 | 0.0187 (11) | 0.0347 (13) | 0.0354 (13) | 0.0004 (10) | −0.0016 (9) | 0.0162 (11) |
C14 | 0.0202 (10) | 0.0221 (11) | 0.0208 (9) | −0.0014 (8) | −0.0018 (8) | 0.0080 (9) |
C15 | 0.0252 (10) | 0.0166 (10) | 0.0155 (10) | 0.0041 (8) | −0.0013 (8) | 0.0050 (8) |
Zn2 | 0.01948 (13) | 0.01887 (13) | 0.01650 (12) | 0.00159 (9) | −0.00018 (9) | 0.00725 (10) |
S3 | 0.0260 (3) | 0.0318 (3) | 0.0302 (3) | −0.0036 (2) | −0.0090 (2) | 0.0100 (3) |
S4 | 0.0305 (3) | 0.0271 (3) | 0.0246 (3) | 0.0090 (2) | 0.0018 (2) | 0.0131 (2) |
O2 | 0.0370 (9) | 0.0446 (11) | 0.0289 (9) | −0.0068 (8) | 0.0065 (7) | 0.0194 (8) |
N5 | 0.0326 (11) | 0.0255 (10) | 0.0265 (10) | −0.0047 (8) | −0.0059 (8) | 0.0130 (8) |
N6 | 0.0259 (9) | 0.0223 (9) | 0.0187 (9) | 0.0026 (8) | 0.0026 (7) | 0.0089 (8) |
N7 | 0.0276 (10) | 0.0198 (9) | 0.0170 (9) | 0.0005 (7) | −0.0033 (7) | 0.0086 (7) |
N8 | 0.0202 (9) | 0.0255 (10) | 0.0210 (9) | −0.0024 (7) | −0.0029 (7) | 0.0102 (8) |
N9 | 0.0250 (10) | 0.0276 (10) | 0.0198 (9) | −0.0015 (8) | −0.0007 (8) | 0.0101 (8) |
N10 | 0.0296 (10) | 0.0273 (10) | 0.0250 (10) | 0.0069 (8) | 0.0042 (8) | 0.0132 (8) |
C16 | 0.0314 (12) | 0.0253 (12) | 0.0235 (11) | 0.0001 (10) | 0.0018 (9) | 0.0098 (10) |
C17 | 0.0308 (12) | 0.0376 (14) | 0.0230 (12) | −0.0053 (10) | 0.0011 (10) | 0.0146 (10) |
C18 | 0.0272 (12) | 0.0524 (16) | 0.0244 (12) | 0.0039 (11) | 0.0069 (10) | 0.0190 (12) |
C19 | 0.0339 (13) | 0.0380 (14) | 0.0199 (11) | 0.0090 (11) | 0.0064 (10) | 0.0106 (10) |
C20 | 0.0279 (11) | 0.0256 (11) | 0.0136 (10) | 0.0071 (9) | 0.0021 (8) | 0.0095 (9) |
C21 | 0.0334 (12) | 0.0245 (11) | 0.0136 (10) | 0.0073 (9) | −0.0017 (9) | 0.0089 (9) |
C22 | 0.0460 (15) | 0.0313 (13) | 0.0214 (12) | 0.0067 (11) | 0.0035 (11) | 0.0040 (10) |
C23 | 0.0358 (13) | 0.0253 (12) | 0.0185 (11) | −0.0049 (10) | −0.0071 (9) | 0.0077 (9) |
C24 | 0.0259 (11) | 0.0317 (13) | 0.0240 (12) | −0.0073 (10) | −0.0087 (9) | 0.0112 (10) |
C25 | 0.0222 (11) | 0.0342 (13) | 0.0351 (13) | −0.0021 (10) | 0.0003 (10) | 0.0166 (11) |
C26 | 0.0303 (13) | 0.0373 (14) | 0.0337 (13) | −0.0030 (11) | 0.0070 (10) | 0.0123 (11) |
C27 | 0.0306 (12) | 0.0352 (13) | 0.0261 (12) | −0.0081 (10) | −0.0031 (10) | 0.0172 (10) |
C28 | 0.0256 (11) | 0.0265 (12) | 0.0270 (12) | −0.0061 (9) | −0.0028 (9) | 0.0144 (10) |
C29 | 0.0244 (10) | 0.0232 (11) | 0.0186 (10) | 0.0015 (8) | 0.0009 (8) | 0.0084 (9) |
C30 | 0.0208 (10) | 0.0203 (10) | 0.0168 (10) | 0.0005 (8) | 0.0024 (8) | 0.0067 (8) |
Zn1—N4 | 1.9752 (18) | Zn2—N10 | 1.9702 (19) |
Zn1—N5 | 1.9858 (19) | Zn2—N9 | 1.9847 (18) |
Zn1—N2 | 2.0851 (17) | Zn2—N7 | 2.0724 (18) |
Zn1—N1 | 2.1647 (17) | Zn2—N6 | 2.2113 (18) |
Zn1—N3 | 2.2698 (18) | Zn2—N8 | 2.2662 (17) |
S1—C14 | 1.621 (2) | S3—C29 | 1.626 (2) |
S2—C15 | 1.620 (2) | S4—C30 | 1.625 (2) |
O1—C11 | 1.426 (3) | O2—C27 | 1.424 (3) |
O1—C12 | 1.428 (3) | O2—C26 | 1.426 (3) |
N1—C1 | 1.333 (3) | N6—C16 | 1.328 (3) |
N1—C5 | 1.349 (3) | N6—C20 | 1.346 (3) |
N2—C6 | 1.278 (3) | N7—C21 | 1.272 (3) |
N2—C8 | 1.459 (3) | N7—C23 | 1.464 (3) |
N3—C13 | 1.481 (3) | N8—C25 | 1.484 (3) |
N3—C9 | 1.489 (3) | N8—C24 | 1.483 (3) |
N3—C10 | 1.490 (3) | N8—C28 | 1.489 (3) |
N4—C14 | 1.164 (3) | N9—C29 | 1.162 (3) |
C1—C2 | 1.389 (3) | N10—C30 | 1.160 (3) |
C1—H1 | 0.9500 | C16—C17 | 1.384 (3) |
C2—C3 | 1.377 (3) | C16—H16 | 0.9500 |
C2—H2 | 0.9500 | C17—C18 | 1.374 (3) |
C3—C4 | 1.393 (3) | C17—H17 | 0.9500 |
C3—H3 | 0.9500 | C18—C19 | 1.392 (3) |
C4—C5 | 1.383 (3) | C18—H18 | 0.9500 |
C4—H4 | 0.9500 | C19—C20 | 1.380 (3) |
C5—C6 | 1.488 (3) | C19—H19 | 0.9500 |
C6—C7 | 1.495 (3) | C20—C21 | 1.497 (3) |
C7—H7A | 0.9800 | C21—C22 | 1.495 (3) |
C7—H7B | 0.9800 | C22—H22A | 0.9800 |
C7—H7C | 0.9800 | C22—H22B | 0.9800 |
C8—C9 | 1.518 (3) | C22—H22C | 0.9800 |
C8—H8A | 0.9900 | C23—C24 | 1.511 (3) |
C8—H8B | 0.9900 | C23—H23A | 0.9900 |
C9—H9A | 0.9900 | C23—H23B | 0.9900 |
C9—H9B | 0.9900 | C24—H24A | 0.9900 |
C10—C11 | 1.513 (3) | C24—H24B | 0.9900 |
C10—H10A | 0.9900 | C25—C26 | 1.508 (3) |
C10—H10B | 0.9900 | C25—H25A | 0.9900 |
C11—H11A | 0.9900 | C25—H25B | 0.9900 |
C11—H11B | 0.9900 | C26—H26A | 0.9900 |
C12—C13 | 1.514 (3) | C26—H26B | 0.9900 |
C12—H12A | 0.9900 | C27—C28 | 1.509 (3) |
C12—H12B | 0.9900 | C27—H27A | 0.9900 |
C13—H13A | 0.9900 | C27—H27B | 0.9900 |
C13—H13B | 0.9900 | C28—H28A | 0.9900 |
C15—N5 | 1.158 (3) | C28—H28B | 0.9900 |
N4—Zn1—N5 | 109.20 (8) | N10—Zn2—N7 | 116.72 (7) |
N4—Zn1—N2 | 144.10 (7) | N9—Zn2—N7 | 132.79 (7) |
N5—Zn1—N2 | 106.50 (7) | N10—Zn2—N6 | 103.26 (7) |
N4—Zn1—N1 | 94.84 (7) | N9—Zn2—N6 | 88.45 (7) |
N5—Zn1—N1 | 99.47 (7) | N7—Zn2—N6 | 74.79 (7) |
N2—Zn1—N1 | 75.52 (7) | N10—Zn2—N8 | 95.58 (7) |
N4—Zn1—N3 | 101.50 (7) | N9—Zn2—N8 | 104.11 (7) |
N5—Zn1—N3 | 95.61 (7) | N7—Zn2—N8 | 78.69 (7) |
N2—Zn1—N3 | 78.47 (7) | N6—Zn2—N8 | 152.32 (7) |
N1—Zn1—N3 | 152.73 (7) | C27—O2—C26 | 108.42 (17) |
C11—O1—C12 | 108.95 (17) | C15—N5—Zn1 | 158.34 (19) |
C1—N1—C5 | 118.96 (18) | C16—N6—C20 | 118.93 (19) |
C1—N1—Zn1 | 126.23 (14) | C16—N6—Zn2 | 126.84 (15) |
C5—N1—Zn1 | 114.37 (14) | C20—N6—Zn2 | 112.82 (14) |
C6—N2—C8 | 123.61 (18) | C21—N7—C23 | 123.23 (19) |
C6—N2—Zn1 | 119.77 (15) | C21—N7—Zn2 | 120.06 (15) |
C8—N2—Zn1 | 116.62 (13) | C23—N7—Zn2 | 116.11 (14) |
C13—N3—C9 | 107.76 (16) | C25—N8—C24 | 108.46 (17) |
C13—N3—C10 | 108.19 (17) | C25—N8—C28 | 108.55 (17) |
C9—N3—C10 | 108.54 (17) | C24—N8—C28 | 109.78 (17) |
C13—N3—Zn1 | 114.89 (14) | C25—N8—Zn2 | 115.82 (13) |
C9—N3—Zn1 | 99.80 (12) | C24—N8—Zn2 | 98.72 (13) |
C10—N3—Zn1 | 116.86 (13) | C28—N8—Zn2 | 114.90 (13) |
C14—N4—Zn1 | 165.19 (18) | C29—N9—Zn2 | 145.54 (17) |
N1—C1—C2 | 122.2 (2) | C30—N10—Zn2 | 169.54 (18) |
N1—C1—H1 | 118.9 | N6—C16—C17 | 122.6 (2) |
C2—C1—H1 | 118.9 | N6—C16—H16 | 118.7 |
C3—C2—C1 | 119.0 (2) | C17—C16—H16 | 118.7 |
C3—C2—H2 | 120.5 | C18—C17—C16 | 118.7 (2) |
C1—C2—H2 | 120.5 | C18—C17—H17 | 120.6 |
C2—C3—C4 | 119.1 (2) | C16—C17—H17 | 120.6 |
C2—C3—H3 | 120.5 | C17—C18—C19 | 119.1 (2) |
C4—C3—H3 | 120.5 | C17—C18—H18 | 120.4 |
C5—C4—C3 | 118.7 (2) | C19—C18—H18 | 120.4 |
C5—C4—H4 | 120.7 | C20—C19—C18 | 118.7 (2) |
C3—C4—H4 | 120.7 | C20—C19—H19 | 120.6 |
N1—C5—C4 | 122.0 (2) | C18—C19—H19 | 120.6 |
N1—C5—C6 | 114.78 (18) | N6—C20—C19 | 121.9 (2) |
C4—C5—C6 | 123.18 (19) | N6—C20—C21 | 114.45 (18) |
N2—C6—C5 | 115.26 (18) | C19—C20—C21 | 123.7 (2) |
N2—C6—C7 | 125.6 (2) | N7—C21—C22 | 125.4 (2) |
C5—C6—C7 | 119.15 (18) | N7—C21—C20 | 115.53 (19) |
C6—C7—H7A | 109.5 | C22—C21—C20 | 119.0 (2) |
C6—C7—H7B | 109.5 | C21—C22—H22A | 109.5 |
H7A—C7—H7B | 109.5 | C21—C22—H22B | 109.5 |
C6—C7—H7C | 109.5 | H22A—C22—H22B | 109.5 |
H7A—C7—H7C | 109.5 | C21—C22—H22C | 109.5 |
H7B—C7—H7C | 109.5 | H22A—C22—H22C | 109.5 |
N2—C8—C9 | 107.21 (18) | H22B—C22—H22C | 109.5 |
N2—C8—H8A | 110.3 | N7—C23—C24 | 107.55 (18) |
C9—C8—H8A | 110.3 | N7—C23—H23A | 110.2 |
N2—C8—H8B | 110.3 | C24—C23—H23A | 110.2 |
C9—C8—H8B | 110.3 | N7—C23—H23B | 110.2 |
H8A—C8—H8B | 108.5 | C24—C23—H23B | 110.2 |
N3—C9—C8 | 110.92 (17) | H23A—C23—H23B | 108.5 |
N3—C9—H9A | 109.5 | N8—C24—C23 | 111.46 (18) |
C8—C9—H9A | 109.5 | N8—C24—H24A | 109.3 |
N3—C9—H9B | 109.5 | C23—C24—H24A | 109.3 |
C8—C9—H9B | 109.5 | N8—C24—H24B | 109.3 |
H9A—C9—H9B | 108.0 | C23—C24—H24B | 109.3 |
N3—C10—C11 | 111.94 (19) | H24A—C24—H24B | 108.0 |
N3—C10—H10A | 109.2 | N8—C25—C26 | 111.31 (19) |
C11—C10—H10A | 109.2 | N8—C25—H25A | 109.4 |
N3—C10—H10B | 109.2 | C26—C25—H25A | 109.4 |
C11—C10—H10B | 109.2 | N8—C25—H25B | 109.4 |
H10A—C10—H10B | 107.9 | C26—C25—H25B | 109.4 |
O1—C11—C10 | 111.59 (18) | H25A—C25—H25B | 108.0 |
O1—C11—H11A | 109.3 | O2—C26—C25 | 111.0 (2) |
C10—C11—H11A | 109.3 | O2—C26—H26A | 109.4 |
O1—C11—H11B | 109.3 | C25—C26—H26A | 109.4 |
C10—C11—H11B | 109.3 | O2—C26—H26B | 109.4 |
H11A—C11—H11B | 108.0 | C25—C26—H26B | 109.4 |
O1—C12—C13 | 110.8 (2) | H26A—C26—H26B | 108.0 |
O1—C12—H12A | 109.5 | O2—C27—C28 | 111.75 (19) |
C13—C12—H12A | 109.5 | O2—C27—H27A | 109.3 |
O1—C12—H12B | 109.5 | C28—C27—H27A | 109.3 |
C13—C12—H12B | 109.5 | O2—C27—H27B | 109.3 |
H12A—C12—H12B | 108.1 | C28—C27—H27B | 109.3 |
N3—C13—C12 | 111.49 (18) | H27A—C27—H27B | 107.9 |
N3—C13—H13A | 109.3 | N8—C28—C27 | 110.69 (19) |
C12—C13—H13A | 109.3 | N8—C28—H28A | 109.5 |
N3—C13—H13B | 109.3 | C27—C28—H28A | 109.5 |
C12—C13—H13B | 109.3 | N8—C28—H28B | 109.5 |
H13A—C13—H13B | 108.0 | C27—C28—H28B | 109.5 |
N4—C14—S1 | 178.3 (2) | H28A—C28—H28B | 108.1 |
N5—C15—S2 | 179.9 (3) | N9—C29—S3 | 179.5 (2) |
N10—Zn2—N9 | 109.96 (8) | N10—C30—S4 | 179.1 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
C12—H12A···S1i | 0.99 | 2.84 | 3.826 (2) | 175 |
C16—H16···S2ii | 0.95 | 2.74 | 3.670 (2) | 168 |
C27—H27B···N9 | 0.99 | 2.55 | 3.421 (3) | 147 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x+1, −y+2, −z+1. |
Experimental details
Crystal data | |
Chemical formula | [Zn(NCS)2(C13H19N3O)] |
Mr | 414.84 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 100 |
a, b, c (Å) | 9.9203 (2), 13.5659 (2), 14.6957 (2) |
α, β, γ (°) | 112.702 (1), 91.471 (1), 94.356 (1) |
V (Å3) | 1815.97 (5) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 1.59 |
Crystal size (mm) | 0.42 × 0.33 × 0.25 |
Data collection | |
Diffractometer | Bruker APEXII CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.554, 0.691 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 15347, 7111, 6171 |
Rint | 0.020 |
(sin θ/λ)max (Å−1) | 0.617 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.027, 0.072, 1.02 |
No. of reflections | 7111 |
No. of parameters | 435 |
No. of restraints | 5 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.63, −0.27 |
Computer programs: APEX2 (Bruker, 2007), SAINT (Bruker, 2007), SHELXS97 (Sheldrick, 2008), X-SEED (Barbour, 2001), SHELXL97 (Sheldrick, 2008) and publCIF (Westrip, 2010).
D—H···A | D—H | H···A | D···A | D—H···A |
C12—H12A···S1i | 0.99 | 2.84 | 3.826 (2) | 175 |
C16—H16···S2ii | 0.95 | 2.74 | 3.670 (2) | 168 |
C27—H27B···N9 | 0.99 | 2.55 | 3.421 (3) | 147 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x+1, −y+2, −z+1. |
Acknowledgements
The authors thank the University of Malaya for funding this study (UMRG grant RG024/09BIO).
References
Addison, A. W., Rao, T. N., Reedijk, J., Rijn, V. J. & Verschoor, G. C. (1984). J. Chem. Soc. Dalton Trans. pp. 1349–1356. CSD CrossRef Web of Science Google Scholar
Barbour, L. J. (2001). J. Supramol. Chem. 1, 189–191. CrossRef CAS Google Scholar
Bruker (2007). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Cai, B.-H. (2009). Acta Cryst. E65, m142. Web of Science CSD CrossRef IUCr Journals Google Scholar
Chen, G., Bai, Z.-P. & Qu, S.-J. (2005). Acta Cryst. E61, m2483–m2484. Web of Science CSD CrossRef IUCr Journals Google Scholar
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Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Westrip, S. P. (2010). J. Appl. Cryst. 43, 920–925. Web of Science CrossRef CAS IUCr Journals Google Scholar
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2-morpholino-N-[1-(2-pyridyl)ethylidene]ethanamine zinc is the condensation product of the reaction of 2-acetylpyridine and 4-(2-aminoethyl)morpholine. Owing to the presence of several donor atoms and the flexibility of the morpholine ring, this Schiff base can, in principle, show ambidentate coordination behavior toward metal ions. On the other hand, thiocyanate is known to bind metal ions in different modes: N-donor, S-donor or N:S-bridging mode. The title compound is a mixed-ligand zinc(II) complex with the two ambidentate ligands. In the crystal, two geometrically slightly different molecules exist. The weighted r.m.s. fit for the superposition of the non-H atoms in both molecules is 1.5267 Å. The Schiff base ligand in the molecules acts as an N,N',N"-tridentate chelate, along with the N atoms of two isothiocyanate ligands this makes penta-coordiante zinc(II) complexes. Similar coordination environment has been reported in related mixed-ligand zinc(II) complexes (Cai, 2009; Chen et al., 2005). The geometry of the two present complexes can be determined by using the index τ = (β-α)/60, where β is the largest angle and α is the second one around the metal center. For an ideal square-pyramid τ is 0, while it is 1 in a perfect trigonal-bipyramid (Addison et al.,1984). The τ values in the two molecules are 0.14 for the Zn1 complex and 0.33 for the Zn2 complex, indicating distorted square-pyramidal geometries. The NCS groups are almost linear [178.3 (2)° and 179.9 (3)° in the Zn1 complex; 179.1 (2)° and 179.1 (2)° in the Zn2 complex], whereas the Zn—N—CS linkages are somewhat bent [158.34 (19)° and 165.19 (18)° in the Zn1 complex; 145.54 (17)° and 169.54 (18)° in the Zn2 complex]. The morpholine rings in both molecules adopt a chair conformation. The crystal structure is stabilized by intermolecular C—H···S and an intramolecular C—H···N hydrogen bond (Table 1).