organic compounds
Zwitterionic form of tris({[5-(4-methoxyphenylazo)salicylidene]amino}ethyl)amine
aFaculty of Chemistry, Bu-Ali Sina University, Hamedan, Iran, and bChemistry Department, Isalmic Azad University, Buinzahra Branch, Qazvin, Iran
*Correspondence e-mail: saleh@basu.ac.ir
The title compound (systematic name: 2-{[2-(bis{2-[({2-hydroxy-5-[(4-methoxyphenyl)diazenyl]phenyl}methylidene)amino]ethyl}amino)ethyl]azaniumylidenemethyl}-4-[(4-methoxyphenyl)diazenyl]phenolate), C48H48N10O6, exists as a zwitterion in the solid state. The three arms of the tripodal molecule are located close to each other and an intramolecular hydrogen bond occurs in each arm (O—H⋯N in two arms and N—H⋯O in the zwitterionic arm). The dihedral angles between the aromatic rings in the three arms are 16.36 (14), 23.94 (14) and, for the zwitterionic arm, 37.14 (14)°. In the crystal, a weak intermoleclar N—H⋯O hydrogen bond occurs.
Related literature
For tripodal Schiff base ligands, see: Kanesato et al. (2000) and for see: Butcher et al. (2005). For further synthetic details, see: Dinçalp et al. (2007).
Experimental
Crystal data
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Refinement
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Data collection: COLLECT (Nonius, 2002); cell DENZO-SMN (Otwinowski & Minor, 1997); data reduction: DENZO-SMN; program(s) used to solve structure: SIR92 (Altomare et al., 1994); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536811004405/hb5798sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811004405/hb5798Isup2.hkl
Azo dye (5-(4-methoxyphenylazo)salicylaldehyde) was synthesized according to the literature procedure (Dinçalp et al., 2007). Then to a solution of above aldehyde (3 mmol) in ethanol (70 ml) was added tren (1 mmol) in the same solvent (10 ml) (see Scheme I). The solution was stirred for 12 h at 40°C. The resulting orange precipitate was filtered and dried in vacuum. Orange blocks of (I) were obtained by slow evaporation from a acetonitril solution at room temperature after 24 h.
The H(C) atom positions were calculated and refined in isotropic approximatiom within riding model with the Uiso(H) parameters equal to 1.2 Ueq(Ci) where U(Ci) is the equivalent thermal parameters of the carbon atoms to which corresponding H atoms are bonded. 'H atoms bonded to C atoms were placed in calculated positions with C-H distances in the range 0.95-0.99 Å and were included in the
in a riding-model approximation with Uiso(H) = 1.2Ueq(C) or 1.5Ueq(Cmethyl). H atoms bonded to O and N atoms were refined independently with isotropic displacement parameters.Data collection: COLLECT (Nonius, 2002); cell
DENZO-SMN (Otwinowski & Minor, 1997); data reduction: DENZO-SMN (Otwinowski & Minor, 1997); program(s) used to solve structure: SIR92 (Altomare et al., 1994); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. A view of the structure of (I), with displacement ellipsoids drawn at the 50% probability level. All C-bonded H atoms omitted for clarity. |
C48H48N10O6 | Z = 2 |
Mr = 860.96 | F(000) = 908 |
Triclinic, P1 | Dx = 1.301 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 10.5613 (9) Å | Cell parameters from 7794 reflections |
b = 12.1234 (5) Å | θ = 2.6–27.5° |
c = 17.2107 (9) Å | µ = 0.09 mm−1 |
α = 86.418 (3)° | T = 150 K |
β = 89.308 (2)° | Block, orange |
γ = 88.084 (3)° | 0.22 × 0.20 × 0.16 mm |
V = 2198.0 (2) Å3 |
Nonius KappaCCD diffractometer | 9781 independent reflections |
Radiation source: fine-focus sealed tube | 4152 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.071 |
Detector resolution: 9 pixels mm-1 | θmax = 27.5°, θmin = 2.6° |
ϕ scans and ω scans with κ offsets | h = −13→13 |
Absorption correction: multi-scan (SORTAV; Blessing, 1995) | k = −15→15 |
Tmin = 0.827, Tmax = 0.990 | l = −22→22 |
19855 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.062 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.187 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.99 | w = 1/[σ2(Fo2) + (0.0768P)2] where P = (Fo2 + 2Fc2)/3 |
9781 reflections | (Δ/σ)max = 0.001 |
589 parameters | Δρmax = 0.37 e Å−3 |
2 restraints | Δρmin = −0.23 e Å−3 |
C48H48N10O6 | γ = 88.084 (3)° |
Mr = 860.96 | V = 2198.0 (2) Å3 |
Triclinic, P1 | Z = 2 |
a = 10.5613 (9) Å | Mo Kα radiation |
b = 12.1234 (5) Å | µ = 0.09 mm−1 |
c = 17.2107 (9) Å | T = 150 K |
α = 86.418 (3)° | 0.22 × 0.20 × 0.16 mm |
β = 89.308 (2)° |
Nonius KappaCCD diffractometer | 9781 independent reflections |
Absorption correction: multi-scan (SORTAV; Blessing, 1995) | 4152 reflections with I > 2σ(I) |
Tmin = 0.827, Tmax = 0.990 | Rint = 0.071 |
19855 measured reflections |
R[F2 > 2σ(F2)] = 0.062 | 2 restraints |
wR(F2) = 0.187 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.99 | Δρmax = 0.37 e Å−3 |
9781 reflections | Δρmin = −0.23 e Å−3 |
589 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.2448 (2) | 0.82743 (16) | 0.82789 (12) | 0.0474 (6) | |
O2 | 0.43622 (18) | 0.45882 (17) | 0.57762 (12) | 0.0495 (6) | |
O3 | −0.0630 (2) | 0.8117 (2) | 0.50993 (12) | 0.0576 (6) | |
O4 | −0.1109 (2) | −0.08081 (19) | 0.91613 (15) | 0.0776 (8) | |
O5 | −0.47340 (19) | −0.00203 (17) | 0.79102 (13) | 0.0582 (6) | |
O6 | −0.57085 (19) | 0.29892 (18) | 1.01599 (12) | 0.0571 (6) | |
N1 | 0.3726 (2) | 0.8543 (2) | 0.56017 (14) | 0.0444 (6) | |
N2 | 0.3882 (2) | 0.74854 (19) | 0.72451 (13) | 0.0403 (6) | |
N3 | 0.3183 (3) | 0.6273 (2) | 0.50901 (14) | 0.0431 (6) | |
N4 | 0.0959 (2) | 0.8958 (2) | 0.59704 (14) | 0.0438 (6) | |
N5 | 0.0284 (2) | 0.4183 (2) | 0.88438 (14) | 0.0460 (6) | |
N6 | 0.0856 (2) | 0.3371 (2) | 0.85796 (14) | 0.0427 (6) | |
N7 | −0.0348 (2) | 0.3043 (2) | 0.66786 (13) | 0.0418 (6) | |
N8 | −0.0348 (2) | 0.2007 (2) | 0.68282 (13) | 0.0425 (6) | |
N9 | −0.2363 (2) | 0.5682 (2) | 0.77249 (14) | 0.0457 (6) | |
N10 | −0.3386 (2) | 0.5194 (2) | 0.76315 (14) | 0.0475 (7) | |
C1 | 0.4720 (3) | 0.8657 (2) | 0.61690 (17) | 0.0468 (8) | |
H1A | 0.4489 | 0.9278 | 0.6495 | 0.056* | |
H1B | 0.5521 | 0.8835 | 0.5891 | 0.056* | |
C2 | 0.4926 (3) | 0.7609 (2) | 0.66887 (17) | 0.0439 (8) | |
H2A | 0.4983 | 0.6961 | 0.6366 | 0.053* | |
H2B | 0.5733 | 0.7644 | 0.6972 | 0.053* | |
C3 | 0.3336 (3) | 0.6552 (2) | 0.73432 (15) | 0.0368 (7) | |
H3A | 0.3584 | 0.5963 | 0.7029 | 0.044* | |
C4 | 0.2343 (2) | 0.6388 (2) | 0.79291 (15) | 0.0355 (7) | |
C5 | 0.1799 (3) | 0.5360 (2) | 0.80621 (16) | 0.0393 (7) | |
H5A | 0.2052 | 0.4766 | 0.7754 | 0.047* | |
C6 | 0.0884 (3) | 0.5204 (3) | 0.86465 (17) | 0.0422 (7) | |
C7 | 0.0480 (3) | 0.6087 (3) | 0.90776 (17) | 0.0476 (8) | |
H7A | −0.0164 | 0.5984 | 0.9463 | 0.057* | |
C8 | 0.1006 (3) | 0.7108 (3) | 0.89495 (16) | 0.0459 (8) | |
H8A | 0.0728 | 0.7705 | 0.9248 | 0.055* | |
C9 | 0.1939 (3) | 0.7264 (2) | 0.83858 (16) | 0.0384 (7) | |
C10 | 0.0247 (3) | 0.2334 (2) | 0.87651 (16) | 0.0405 (7) | |
C11 | 0.0921 (3) | 0.1410 (3) | 0.85677 (18) | 0.0494 (8) | |
H11A | 0.1733 | 0.1485 | 0.8330 | 0.059* | |
C12 | 0.0447 (3) | 0.0371 (3) | 0.87057 (19) | 0.0574 (9) | |
H12A | 0.0926 | −0.0264 | 0.8564 | 0.069* | |
C13 | −0.0730 (3) | 0.0262 (3) | 0.90515 (19) | 0.0508 (8) | |
C14 | −0.1426 (3) | 0.1186 (3) | 0.92557 (17) | 0.0520 (9) | |
H14A | −0.2237 | 0.1114 | 0.9495 | 0.062* | |
C15 | −0.0925 (3) | 0.2223 (3) | 0.91061 (16) | 0.0468 (8) | |
H15A | −0.1399 | 0.2863 | 0.9242 | 0.056* | |
C16 | −0.2313 (4) | −0.0982 (3) | 0.9522 (2) | 0.0927 (15) | |
H16A | −0.2475 | −0.1775 | 0.9563 | 0.139* | |
H16B | −0.2974 | −0.0590 | 0.9208 | 0.139* | |
H16C | −0.2318 | −0.0701 | 1.0044 | 0.139* | |
C17 | 0.4180 (3) | 0.8058 (3) | 0.48855 (17) | 0.0487 (8) | |
H17A | 0.4997 | 0.7654 | 0.4989 | 0.058* | |
H17B | 0.4333 | 0.8659 | 0.4482 | 0.058* | |
C18 | 0.3250 (3) | 0.7275 (2) | 0.45807 (17) | 0.0489 (8) | |
H18A | 0.2401 | 0.7645 | 0.4544 | 0.059* | |
H18B | 0.3515 | 0.7080 | 0.4052 | 0.059* | |
C19 | 0.2148 (3) | 0.5907 (2) | 0.54053 (16) | 0.0422 (7) | |
H19A | 0.1382 | 0.6330 | 0.5325 | 0.051* | |
C20 | 0.2118 (3) | 0.4892 (2) | 0.58677 (16) | 0.0391 (7) | |
C21 | 0.0946 (3) | 0.4468 (2) | 0.61236 (16) | 0.0392 (7) | |
H21A | 0.0193 | 0.4910 | 0.6044 | 0.047* | |
C22 | 0.0871 (3) | 0.3435 (2) | 0.64833 (16) | 0.0397 (7) | |
C23 | 0.2004 (3) | 0.2813 (2) | 0.66447 (16) | 0.0411 (7) | |
H23A | 0.1959 | 0.2101 | 0.6906 | 0.049* | |
C24 | 0.3155 (3) | 0.3206 (2) | 0.64355 (15) | 0.0413 (7) | |
H24A | 0.3897 | 0.2777 | 0.6573 | 0.050* | |
C25 | 0.3276 (3) | 0.4250 (2) | 0.60136 (16) | 0.0393 (7) | |
C26 | −0.1541 (3) | 0.1589 (2) | 0.70770 (16) | 0.0404 (7) | |
C27 | −0.1660 (3) | 0.0458 (3) | 0.7050 (2) | 0.0548 (9) | |
H27A | −0.0983 | 0.0027 | 0.6844 | 0.066* | |
C28 | −0.2738 (3) | −0.0052 (3) | 0.7316 (2) | 0.0573 (9) | |
H28A | −0.2810 | −0.0826 | 0.7283 | 0.069* | |
C29 | −0.3711 (3) | 0.0563 (3) | 0.76274 (18) | 0.0453 (8) | |
C30 | −0.3613 (3) | 0.1697 (2) | 0.76609 (16) | 0.0430 (8) | |
H30A | −0.4288 | 0.2125 | 0.7873 | 0.052* | |
C31 | −0.2526 (3) | 0.2202 (2) | 0.73831 (16) | 0.0413 (7) | |
H31A | −0.2459 | 0.2979 | 0.7404 | 0.050* | |
C32 | −0.5733 (3) | 0.0585 (3) | 0.8261 (2) | 0.0722 (11) | |
H32A | −0.6401 | 0.0081 | 0.8435 | 0.108* | |
H32B | −0.6081 | 0.1147 | 0.7881 | 0.108* | |
H32C | −0.5410 | 0.0945 | 0.8709 | 0.108* | |
C33 | 0.2976 (3) | 0.9573 (3) | 0.54508 (19) | 0.0515 (9) | |
H33A | 0.2576 | 0.9564 | 0.4934 | 0.062* | |
H33B | 0.3547 | 1.0206 | 0.5436 | 0.062* | |
C34 | 0.1956 (3) | 0.9737 (3) | 0.60625 (18) | 0.0497 (8) | |
H34A | 0.2325 | 0.9617 | 0.6588 | 0.060* | |
H34B | 0.1600 | 1.0503 | 0.6006 | 0.060* | |
C35 | 0.0569 (3) | 0.8342 (2) | 0.65497 (18) | 0.0420 (7) | |
H35A | 0.0957 | 0.8376 | 0.7042 | 0.050* | |
C36 | −0.0453 (3) | 0.7596 (2) | 0.64655 (17) | 0.0379 (7) | |
C37 | −0.0930 (3) | 0.6951 (2) | 0.71012 (17) | 0.0413 (7) | |
H37A | −0.0565 | 0.7003 | 0.7599 | 0.050* | |
C38 | −0.1911 (3) | 0.6244 (2) | 0.70259 (17) | 0.0412 (7) | |
C39 | −0.2429 (3) | 0.6148 (3) | 0.62893 (18) | 0.0484 (8) | |
H39A | −0.3081 | 0.5641 | 0.6225 | 0.058* | |
C40 | −0.1999 (3) | 0.6784 (3) | 0.56589 (18) | 0.0491 (8) | |
H40A | −0.2370 | 0.6725 | 0.5164 | 0.059* | |
C41 | −0.1031 (3) | 0.7508 (3) | 0.57366 (17) | 0.0436 (8) | |
C42 | −0.3878 (3) | 0.4641 (2) | 0.83188 (18) | 0.0424 (7) | |
C43 | −0.3285 (3) | 0.4523 (2) | 0.90327 (18) | 0.0476 (8) | |
H43A | −0.2474 | 0.4822 | 0.9091 | 0.057* | |
C44 | −0.3864 (3) | 0.3974 (2) | 0.96617 (19) | 0.0484 (8) | |
H44A | −0.3451 | 0.3892 | 1.0150 | 0.058* | |
C45 | −0.5053 (3) | 0.3540 (2) | 0.95763 (18) | 0.0437 (8) | |
C46 | −0.5658 (3) | 0.3664 (2) | 0.88634 (18) | 0.0466 (8) | |
H46A | −0.6480 | 0.3384 | 0.8807 | 0.056* | |
C47 | −0.5060 (3) | 0.4197 (2) | 0.82372 (18) | 0.0445 (8) | |
H47A | −0.5461 | 0.4260 | 0.7745 | 0.053* | |
C48 | −0.5098 (3) | 0.2782 (3) | 1.08894 (19) | 0.0662 (10) | |
H48A | −0.5668 | 0.2386 | 1.1255 | 0.099* | |
H48B | −0.4884 | 0.3486 | 1.1097 | 0.099* | |
H48C | −0.4322 | 0.2331 | 1.0819 | 0.099* | |
H1 | 0.308 (4) | 0.816 (3) | 0.787 (2) | 0.103 (14)* | |
H2 | 0.392 (4) | 0.573 (3) | 0.519 (2) | 0.100 (14)* | |
H3 | 0.005 (4) | 0.867 (3) | 0.529 (2) | 0.103 (13)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0573 (14) | 0.0363 (13) | 0.0490 (14) | −0.0036 (11) | 0.0010 (11) | −0.0046 (10) |
O2 | 0.0392 (12) | 0.0557 (14) | 0.0529 (13) | −0.0072 (11) | 0.0028 (10) | 0.0031 (11) |
O3 | 0.0633 (15) | 0.0720 (16) | 0.0368 (13) | −0.0080 (13) | −0.0009 (11) | 0.0047 (11) |
O4 | 0.0704 (17) | 0.0500 (15) | 0.110 (2) | −0.0222 (14) | −0.0129 (15) | 0.0250 (14) |
O5 | 0.0429 (13) | 0.0481 (14) | 0.0844 (17) | −0.0111 (11) | 0.0115 (12) | −0.0067 (12) |
O6 | 0.0515 (13) | 0.0604 (15) | 0.0587 (15) | −0.0159 (12) | −0.0064 (11) | 0.0113 (12) |
N1 | 0.0423 (14) | 0.0430 (16) | 0.0467 (16) | −0.0039 (13) | 0.0005 (12) | 0.0069 (12) |
N2 | 0.0393 (14) | 0.0391 (15) | 0.0419 (15) | −0.0059 (12) | −0.0013 (11) | 0.0052 (12) |
N3 | 0.0450 (16) | 0.0394 (16) | 0.0443 (16) | −0.0041 (14) | −0.0011 (12) | 0.0046 (12) |
N4 | 0.0435 (15) | 0.0435 (16) | 0.0435 (16) | −0.0001 (13) | 0.0017 (12) | 0.0037 (13) |
N5 | 0.0510 (16) | 0.0430 (15) | 0.0435 (16) | −0.0004 (13) | 0.0029 (12) | 0.0005 (13) |
N6 | 0.0430 (14) | 0.0414 (16) | 0.0436 (16) | 0.0015 (13) | −0.0007 (12) | −0.0027 (13) |
N7 | 0.0406 (15) | 0.0424 (16) | 0.0421 (15) | −0.0036 (13) | −0.0012 (11) | 0.0010 (12) |
N8 | 0.0380 (14) | 0.0400 (16) | 0.0494 (16) | −0.0053 (12) | 0.0022 (11) | 0.0001 (12) |
N9 | 0.0362 (14) | 0.0437 (16) | 0.0563 (17) | 0.0001 (13) | 0.0005 (12) | 0.0020 (13) |
N10 | 0.0423 (15) | 0.0434 (16) | 0.0563 (17) | −0.0005 (13) | 0.0014 (13) | −0.0011 (13) |
C1 | 0.0449 (18) | 0.0451 (19) | 0.0500 (19) | −0.0146 (16) | 0.0008 (15) | 0.0068 (15) |
C2 | 0.0349 (16) | 0.0456 (19) | 0.0502 (19) | −0.0052 (15) | 0.0028 (14) | 0.0069 (15) |
C3 | 0.0391 (16) | 0.0346 (17) | 0.0362 (17) | −0.0026 (14) | −0.0023 (13) | 0.0011 (13) |
C4 | 0.0361 (16) | 0.0338 (17) | 0.0363 (17) | −0.0036 (14) | −0.0021 (13) | 0.0022 (14) |
C5 | 0.0417 (17) | 0.0373 (18) | 0.0386 (17) | −0.0049 (14) | −0.0070 (14) | 0.0043 (14) |
C6 | 0.0416 (17) | 0.0457 (18) | 0.0383 (17) | −0.0076 (15) | −0.0042 (14) | 0.0091 (15) |
C7 | 0.0518 (19) | 0.053 (2) | 0.0372 (18) | 0.0022 (17) | 0.0066 (15) | 0.0029 (16) |
C8 | 0.058 (2) | 0.0410 (19) | 0.0384 (18) | −0.0017 (16) | 0.0006 (15) | −0.0017 (15) |
C9 | 0.0428 (17) | 0.0359 (18) | 0.0363 (17) | −0.0045 (15) | −0.0029 (14) | 0.0027 (14) |
C10 | 0.0433 (18) | 0.0397 (19) | 0.0377 (18) | −0.0064 (16) | −0.0026 (14) | 0.0071 (14) |
C11 | 0.0462 (19) | 0.043 (2) | 0.058 (2) | 0.0001 (17) | 0.0081 (16) | −0.0002 (16) |
C12 | 0.060 (2) | 0.037 (2) | 0.075 (2) | −0.0009 (17) | 0.0048 (19) | −0.0001 (17) |
C13 | 0.054 (2) | 0.043 (2) | 0.054 (2) | −0.0083 (18) | −0.0071 (16) | 0.0164 (16) |
C14 | 0.0422 (18) | 0.068 (2) | 0.044 (2) | −0.0058 (19) | 0.0040 (15) | 0.0052 (17) |
C15 | 0.0526 (19) | 0.045 (2) | 0.0428 (19) | −0.0007 (16) | −0.0025 (15) | −0.0013 (15) |
C16 | 0.070 (3) | 0.095 (3) | 0.110 (3) | −0.047 (3) | −0.019 (2) | 0.045 (3) |
C17 | 0.0464 (18) | 0.052 (2) | 0.046 (2) | −0.0053 (16) | 0.0106 (15) | 0.0057 (16) |
C18 | 0.0484 (18) | 0.053 (2) | 0.0441 (19) | −0.0024 (17) | −0.0008 (15) | 0.0067 (16) |
C19 | 0.0408 (17) | 0.0424 (17) | 0.0440 (18) | −0.0059 (15) | 0.0021 (14) | −0.0053 (13) |
C20 | 0.0423 (17) | 0.0392 (16) | 0.0362 (17) | −0.0047 (15) | 0.0038 (13) | −0.0053 (12) |
C21 | 0.0374 (17) | 0.0362 (18) | 0.0443 (18) | 0.0005 (14) | 0.0031 (13) | −0.0066 (14) |
C22 | 0.0361 (17) | 0.0387 (18) | 0.0442 (18) | −0.0038 (15) | 0.0024 (14) | −0.0021 (14) |
C23 | 0.0442 (18) | 0.0394 (18) | 0.0398 (18) | −0.0033 (15) | −0.0009 (14) | −0.0015 (14) |
C24 | 0.0404 (17) | 0.0441 (19) | 0.0394 (18) | 0.0001 (15) | −0.0052 (14) | −0.0016 (15) |
C25 | 0.0413 (18) | 0.0425 (19) | 0.0350 (17) | −0.0046 (15) | −0.0008 (13) | −0.0070 (14) |
C26 | 0.0352 (17) | 0.0413 (19) | 0.0447 (18) | −0.0060 (15) | 0.0000 (14) | 0.0003 (15) |
C27 | 0.0396 (18) | 0.041 (2) | 0.084 (3) | −0.0007 (16) | 0.0092 (17) | −0.0078 (18) |
C28 | 0.0412 (19) | 0.040 (2) | 0.092 (3) | −0.0058 (17) | 0.0081 (18) | −0.0106 (18) |
C29 | 0.0367 (17) | 0.043 (2) | 0.056 (2) | −0.0108 (16) | 0.0003 (15) | −0.0011 (16) |
C30 | 0.0397 (17) | 0.0408 (19) | 0.0478 (19) | 0.0021 (15) | 0.0069 (14) | −0.0010 (15) |
C31 | 0.0443 (18) | 0.0352 (17) | 0.0441 (18) | −0.0046 (15) | 0.0001 (14) | 0.0022 (14) |
C32 | 0.054 (2) | 0.062 (3) | 0.100 (3) | −0.010 (2) | 0.029 (2) | −0.003 (2) |
C33 | 0.052 (2) | 0.044 (2) | 0.057 (2) | −0.0073 (17) | −0.0002 (16) | 0.0115 (16) |
C34 | 0.0513 (19) | 0.0378 (19) | 0.059 (2) | 0.0016 (16) | −0.0034 (16) | 0.0024 (16) |
C35 | 0.0391 (17) | 0.0427 (19) | 0.0432 (19) | 0.0066 (15) | −0.0024 (14) | 0.0002 (15) |
C36 | 0.0352 (16) | 0.0368 (17) | 0.0410 (18) | 0.0071 (14) | 0.0008 (13) | −0.0004 (14) |
C37 | 0.0365 (16) | 0.0456 (19) | 0.0416 (18) | 0.0012 (15) | −0.0070 (13) | 0.0000 (15) |
C38 | 0.0345 (16) | 0.0414 (18) | 0.0465 (19) | 0.0064 (15) | 0.0035 (14) | 0.0016 (15) |
C39 | 0.0434 (18) | 0.048 (2) | 0.055 (2) | −0.0021 (16) | 0.0027 (16) | −0.0147 (17) |
C40 | 0.0484 (19) | 0.061 (2) | 0.0383 (18) | 0.0025 (17) | −0.0013 (15) | −0.0097 (16) |
C41 | 0.0406 (17) | 0.050 (2) | 0.0397 (19) | 0.0070 (16) | 0.0021 (14) | −0.0007 (15) |
C42 | 0.0376 (17) | 0.0347 (18) | 0.054 (2) | 0.0017 (14) | 0.0000 (15) | 0.0007 (15) |
C43 | 0.0365 (17) | 0.0442 (19) | 0.062 (2) | 0.0005 (15) | −0.0075 (16) | 0.0000 (16) |
C44 | 0.0391 (18) | 0.051 (2) | 0.055 (2) | −0.0069 (16) | −0.0086 (15) | 0.0059 (16) |
C45 | 0.0391 (17) | 0.0350 (18) | 0.057 (2) | −0.0041 (15) | 0.0034 (15) | 0.0004 (15) |
C46 | 0.0372 (17) | 0.0437 (19) | 0.059 (2) | −0.0045 (15) | −0.0053 (16) | −0.0011 (16) |
C47 | 0.0399 (17) | 0.0423 (19) | 0.051 (2) | 0.0005 (15) | −0.0059 (15) | −0.0035 (15) |
C48 | 0.066 (2) | 0.072 (3) | 0.060 (2) | −0.018 (2) | −0.0120 (19) | 0.0141 (19) |
O1—C9 | 1.355 (3) | C17—C18 | 1.509 (4) |
O1—H1 | 0.98 (4) | C17—H17A | 0.9900 |
O2—C25 | 1.284 (3) | C17—H17B | 0.9900 |
O3—C41 | 1.355 (3) | C18—H18A | 0.9900 |
O3—H3 | 1.07 (4) | C18—H18B | 0.9900 |
O4—C13 | 1.371 (3) | C19—C20 | 1.424 (4) |
O4—C16 | 1.425 (4) | C19—H19A | 0.9500 |
O5—C29 | 1.378 (3) | C20—C21 | 1.411 (4) |
O5—C32 | 1.416 (4) | C20—C25 | 1.444 (4) |
O6—C45 | 1.366 (3) | C21—C22 | 1.366 (4) |
O6—C48 | 1.423 (3) | C21—H21A | 0.9500 |
N1—C1 | 1.459 (3) | C22—C23 | 1.414 (4) |
N1—C33 | 1.467 (4) | C23—C24 | 1.357 (4) |
N1—C17 | 1.467 (4) | C23—H23A | 0.9500 |
N2—C3 | 1.288 (3) | C24—C25 | 1.428 (4) |
N2—C2 | 1.457 (3) | C24—H24A | 0.9500 |
N3—C19 | 1.294 (3) | C26—C31 | 1.377 (4) |
N3—C18 | 1.457 (4) | C26—C27 | 1.385 (4) |
N3—H2 | 1.02 (4) | C27—C28 | 1.373 (4) |
N4—C35 | 1.281 (3) | C27—H27A | 0.9500 |
N4—C34 | 1.454 (3) | C28—C29 | 1.372 (4) |
N5—N6 | 1.245 (3) | C28—H28A | 0.9500 |
N5—C6 | 1.429 (3) | C29—C30 | 1.388 (4) |
N6—C10 | 1.447 (3) | C30—C31 | 1.385 (4) |
N7—N8 | 1.266 (3) | C30—H30A | 0.9500 |
N7—C22 | 1.417 (3) | C31—H31A | 0.9500 |
N8—C26 | 1.425 (3) | C32—H32A | 0.9800 |
N9—N10 | 1.266 (3) | C32—H32B | 0.9800 |
N9—C38 | 1.430 (4) | C32—H32C | 0.9800 |
N10—C42 | 1.424 (4) | C33—C34 | 1.514 (4) |
C1—C2 | 1.518 (4) | C33—H33A | 0.9900 |
C1—H1A | 0.9900 | C33—H33B | 0.9900 |
C1—H1B | 0.9900 | C34—H34A | 0.9900 |
C2—H2A | 0.9900 | C34—H34B | 0.9900 |
C2—H2B | 0.9900 | C35—C36 | 1.445 (4) |
C3—C4 | 1.456 (4) | C35—H35A | 0.9500 |
C3—H3A | 0.9500 | C36—C37 | 1.403 (4) |
C4—C5 | 1.395 (3) | C36—C41 | 1.414 (4) |
C4—C9 | 1.412 (4) | C37—C38 | 1.380 (4) |
C5—C6 | 1.395 (4) | C37—H37A | 0.9500 |
C5—H5A | 0.9500 | C38—C39 | 1.400 (4) |
C6—C7 | 1.393 (4) | C39—C40 | 1.373 (4) |
C7—C8 | 1.378 (4) | C39—H39A | 0.9500 |
C7—H7A | 0.9500 | C40—C41 | 1.382 (4) |
C8—C9 | 1.384 (4) | C40—H40A | 0.9500 |
C8—H8A | 0.9500 | C42—C43 | 1.383 (4) |
C10—C11 | 1.366 (4) | C42—C47 | 1.388 (4) |
C10—C15 | 1.371 (4) | C43—C44 | 1.382 (4) |
C11—C12 | 1.376 (4) | C43—H43A | 0.9500 |
C11—H11A | 0.9500 | C44—C45 | 1.390 (4) |
C12—C13 | 1.379 (4) | C44—H44A | 0.9500 |
C12—H12A | 0.9500 | C45—C46 | 1.388 (4) |
C13—C14 | 1.381 (4) | C46—C47 | 1.379 (4) |
C14—C15 | 1.388 (4) | C46—H46A | 0.9500 |
C14—H14A | 0.9500 | C47—H47A | 0.9500 |
C15—H15A | 0.9500 | C48—H48A | 0.9800 |
C16—H16A | 0.9800 | C48—H48B | 0.9800 |
C16—H16B | 0.9800 | C48—H48C | 0.9800 |
C16—H16C | 0.9800 | ||
C9—O1—H1 | 102 (2) | C22—C21—H21A | 119.3 |
C41—O3—H3 | 107 (2) | C20—C21—H21A | 119.3 |
C13—O4—C16 | 117.4 (3) | C21—C22—C23 | 118.8 (3) |
C29—O5—C32 | 117.3 (2) | C21—C22—N7 | 117.9 (3) |
C45—O6—C48 | 117.7 (2) | C23—C22—N7 | 123.2 (3) |
C1—N1—C33 | 112.3 (2) | C24—C23—C22 | 121.7 (3) |
C1—N1—C17 | 113.5 (2) | C24—C23—H23A | 119.2 |
C33—N1—C17 | 112.8 (2) | C22—C23—H23A | 119.2 |
C3—N2—C2 | 119.8 (3) | C23—C24—C25 | 121.5 (3) |
C19—N3—C18 | 124.2 (3) | C23—C24—H24A | 119.2 |
C19—N3—H2 | 111 (2) | C25—C24—H24A | 119.2 |
C18—N3—H2 | 124 (2) | O2—C25—C24 | 121.2 (3) |
C35—N4—C34 | 120.9 (3) | O2—C25—C20 | 122.4 (3) |
N6—N5—C6 | 113.1 (2) | C24—C25—C20 | 116.4 (3) |
N5—N6—C10 | 113.6 (2) | C31—C26—C27 | 118.7 (3) |
N8—N7—C22 | 113.0 (3) | C31—C26—N8 | 125.4 (3) |
N7—N8—C26 | 114.7 (3) | C27—C26—N8 | 115.8 (3) |
N10—N9—C38 | 113.0 (2) | C28—C27—C26 | 121.3 (3) |
N9—N10—C42 | 114.6 (2) | C28—C27—H27A | 119.4 |
N1—C1—C2 | 111.9 (2) | C26—C27—H27A | 119.4 |
N1—C1—H1A | 109.2 | C29—C28—C27 | 119.7 (3) |
C2—C1—H1A | 109.2 | C29—C28—H28A | 120.1 |
N1—C1—H1B | 109.2 | C27—C28—H28A | 120.1 |
C2—C1—H1B | 109.2 | C28—C29—O5 | 116.0 (3) |
H1A—C1—H1B | 107.9 | C28—C29—C30 | 120.1 (3) |
N2—C2—C1 | 110.1 (2) | O5—C29—C30 | 123.9 (3) |
N2—C2—H2A | 109.6 | C31—C30—C29 | 119.6 (3) |
C1—C2—H2A | 109.6 | C31—C30—H30A | 120.2 |
N2—C2—H2B | 109.6 | C29—C30—H30A | 120.2 |
C1—C2—H2B | 109.6 | C26—C31—C30 | 120.7 (3) |
H2A—C2—H2B | 108.2 | C26—C31—H31A | 119.7 |
N2—C3—C4 | 120.8 (3) | C30—C31—H31A | 119.7 |
N2—C3—H3A | 119.6 | O5—C32—H32A | 109.5 |
C4—C3—H3A | 119.6 | O5—C32—H32B | 109.5 |
C5—C4—C9 | 119.0 (2) | H32A—C32—H32B | 109.5 |
C5—C4—C3 | 120.7 (3) | O5—C32—H32C | 109.5 |
C9—C4—C3 | 120.3 (2) | H32A—C32—H32C | 109.5 |
C4—C5—C6 | 120.1 (3) | H32B—C32—H32C | 109.5 |
C4—C5—H5A | 120.0 | N1—C33—C34 | 112.5 (2) |
C6—C5—H5A | 120.0 | N1—C33—H33A | 109.1 |
C7—C6—C5 | 119.9 (3) | C34—C33—H33A | 109.1 |
C7—C6—N5 | 115.3 (3) | N1—C33—H33B | 109.1 |
C5—C6—N5 | 124.9 (3) | C34—C33—H33B | 109.1 |
C8—C7—C6 | 120.6 (3) | H33A—C33—H33B | 107.8 |
C8—C7—H7A | 119.7 | N4—C34—C33 | 109.4 (2) |
C6—C7—H7A | 119.7 | N4—C34—H34A | 109.8 |
C7—C8—C9 | 120.0 (3) | C33—C34—H34A | 109.8 |
C7—C8—H8A | 120.0 | N4—C34—H34B | 109.8 |
C9—C8—H8A | 120.0 | C33—C34—H34B | 109.8 |
O1—C9—C8 | 118.7 (3) | H34A—C34—H34B | 108.2 |
O1—C9—C4 | 120.9 (2) | N4—C35—C36 | 121.0 (3) |
C8—C9—C4 | 120.5 (3) | N4—C35—H35A | 119.5 |
C11—C10—C15 | 119.3 (3) | C36—C35—H35A | 119.5 |
C11—C10—N6 | 115.4 (3) | C37—C36—C41 | 117.3 (3) |
C15—C10—N6 | 125.4 (3) | C37—C36—C35 | 121.8 (3) |
C10—C11—C12 | 121.3 (3) | C41—C36—C35 | 120.9 (3) |
C10—C11—H11A | 119.3 | C38—C37—C36 | 122.0 (3) |
C12—C11—H11A | 119.3 | C38—C37—H37A | 119.0 |
C11—C12—C13 | 119.3 (3) | C36—C37—H37A | 119.0 |
C11—C12—H12A | 120.4 | C37—C38—C39 | 119.0 (3) |
C13—C12—H12A | 120.4 | C37—C38—N9 | 116.7 (3) |
O4—C13—C12 | 114.4 (3) | C39—C38—N9 | 124.2 (3) |
O4—C13—C14 | 125.3 (3) | C40—C39—C38 | 120.3 (3) |
C12—C13—C14 | 120.3 (3) | C40—C39—H39A | 119.9 |
C13—C14—C15 | 119.1 (3) | C38—C39—H39A | 119.9 |
C13—C14—H14A | 120.5 | C39—C40—C41 | 120.7 (3) |
C15—C14—H14A | 120.5 | C39—C40—H40A | 119.6 |
C10—C15—C14 | 120.8 (3) | C41—C40—H40A | 119.6 |
C10—C15—H15A | 119.6 | O3—C41—C40 | 118.9 (3) |
C14—C15—H15A | 119.6 | O3—C41—C36 | 120.5 (3) |
O4—C16—H16A | 109.5 | C40—C41—C36 | 120.6 (3) |
O4—C16—H16B | 109.5 | C43—C42—C47 | 119.4 (3) |
H16A—C16—H16B | 109.5 | C43—C42—N10 | 125.8 (3) |
O4—C16—H16C | 109.5 | C47—C42—N10 | 114.8 (3) |
H16A—C16—H16C | 109.5 | C44—C43—C42 | 120.5 (3) |
H16B—C16—H16C | 109.5 | C44—C43—H43A | 119.8 |
N1—C17—C18 | 112.3 (2) | C42—C43—H43A | 119.8 |
N1—C17—H17A | 109.1 | C43—C44—C45 | 119.7 (3) |
C18—C17—H17A | 109.1 | C43—C44—H44A | 120.1 |
N1—C17—H17B | 109.1 | C45—C44—H44A | 120.1 |
C18—C17—H17B | 109.1 | O6—C45—C46 | 115.5 (2) |
H17A—C17—H17B | 107.9 | O6—C45—C44 | 124.4 (3) |
N3—C18—C17 | 110.9 (2) | C46—C45—C44 | 120.1 (3) |
N3—C18—H18A | 109.5 | C47—C46—C45 | 119.5 (3) |
C17—C18—H18A | 109.5 | C47—C46—H46A | 120.2 |
N3—C18—H18B | 109.5 | C45—C46—H46A | 120.2 |
C17—C18—H18B | 109.5 | C46—C47—C42 | 120.7 (3) |
H18A—C18—H18B | 108.1 | C46—C47—H47A | 119.6 |
N3—C19—C20 | 122.2 (3) | C42—C47—H47A | 119.6 |
N3—C19—H19A | 118.9 | O6—C48—H48A | 109.5 |
C20—C19—H19A | 118.9 | O6—C48—H48B | 109.5 |
C21—C20—C19 | 120.0 (3) | H48A—C48—H48B | 109.5 |
C21—C20—C25 | 120.0 (3) | O6—C48—H48C | 109.5 |
C19—C20—C25 | 119.8 (3) | H48A—C48—H48C | 109.5 |
C22—C21—C20 | 121.4 (3) | H48B—C48—H48C | 109.5 |
D—H···A | D—H | H···A | D···A | D—H···A |
O3—H3···N4 | 1.07 (4) | 1.58 (4) | 2.543 (3) | 146 (3) |
O1—H1···N2 | 0.98 (4) | 1.61 (4) | 2.534 (3) | 157 (3) |
N3—H2···O2 | 1.02 (4) | 1.71 (4) | 2.585 (3) | 142 (3) |
N3—H2···O2i | 1.02 (4) | 2.48 (4) | 3.155 (3) | 123 (3) |
Symmetry code: (i) −x+1, −y+1, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C48H48N10O6 |
Mr | 860.96 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 150 |
a, b, c (Å) | 10.5613 (9), 12.1234 (5), 17.2107 (9) |
α, β, γ (°) | 86.418 (3), 89.308 (2), 88.084 (3) |
V (Å3) | 2198.0 (2) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.09 |
Crystal size (mm) | 0.22 × 0.20 × 0.16 |
Data collection | |
Diffractometer | Nonius KappaCCD diffractometer |
Absorption correction | Multi-scan (SORTAV; Blessing, 1995) |
Tmin, Tmax | 0.827, 0.990 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 19855, 9781, 4152 |
Rint | 0.071 |
(sin θ/λ)max (Å−1) | 0.649 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.062, 0.187, 0.99 |
No. of reflections | 9781 |
No. of parameters | 589 |
No. of restraints | 2 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.37, −0.23 |
Computer programs: COLLECT (Nonius, 2002), DENZO-SMN (Otwinowski & Minor, 1997), SIR92 (Altomare et al., 1994), SHELXTL (Sheldrick, 2008), PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
O3—H3···N4 | 1.07 (4) | 1.58 (4) | 2.543 (3) | 146 (3) |
O1—H1···N2 | 0.98 (4) | 1.61 (4) | 2.534 (3) | 157 (3) |
N3—H2···O2 | 1.02 (4) | 1.71 (4) | 2.585 (3) | 142 (3) |
N3—H2···O2i | 1.02 (4) | 2.48 (4) | 3.155 (3) | 123 (3) |
Symmetry code: (i) −x+1, −y+1, −z+1. |
Acknowledgements
We are grateful to Bu-Ali Sina University for financial support.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Herein, we report the synthesis and X-ray crystal structure of the title compound, (I), (Fig. 1), a tripodal Schiff base ligand containing three azo groups. For tripodal Schiff base ligands see: Kanesato et al. (2000) and for azo compounds see: Butcher et al. (2005).
The title compound adopts a cage-like conformation in the solid state. The geometry around the bridghead N atom of the compound is approximately pyramidal, since the angles C1–N1–C33, C1–N1–C17 and C33–N1–C17 have values of 112.3 (2), 113.5 (2) and 112.8 (2)°, respectively. The average of N═N bond lengths[1.25 (3) Å] is in the expected range and is in good agreement with values found in other similar compounds. Interestingly the hydrogen atom of one of three OH groups has transferred to one of three imine groups through intramolecular hydrogen bonding producing a zwitterionic compound. Three arms of tripodal ligand are located close to each other and in all of them there is an intramolecularhydrogen bonding (table 1).