organic compounds
1′-Methyl-4′-(1-naphthyl)-1′′,2′′,3′′,4′′-tetrahydroindane-2-spiro-2′-pyrrolidine-3′-spiro-2′′-naphthalene-1,3,1′′-trione
aDepartment of Physics, Kalasalingam University, Krishnankoil 626 190, India, bLaboratory of X-ray Crystallography, Indian Institute of Chemical Technology, Hyderabad 500 007, India, and cDepartment of Organic Chemistry, University of Madras, Guindy Campus, Chennai 600 025, India
*Correspondence e-mail: s_selvanayagam@rediffmail.com
In the title compound, C32H25NO3, the pyrrolidine ring adopts an whereas the cyclohexanone ring in the tetrahydronaphthalene fused-ring system adopts a half-chair conformation. The indanedione unit is oriented at an angle of 58.9 (1)° with respect to the naphthyl ring system. Three intramolecular C—H⋯O close contacts and an intramolecular C—H⋯π interaction are observed. In the crystal, molecules associate via C—H⋯O hydrogen bonds, forming a helical chain with a C(10) motif along the b axis.
Related literature
For general background to pyrrolidine derivatives, see: Bello et al. (2010); Pettersson et al. (2011). For related structures, see: Abdul Ajees et al. (2002); Selvanayagam et al. (2005). For ring puckering parameters, see: Cremer & Pople (1975); Nardelli (1983).
Experimental
Crystal data
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Data collection
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Refinement
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Data collection: SMART (Bruker, 2001); cell SAINT (Bruker, 2001); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and PLATON (Spek, 2009); software used to prepare material for publication: SHELXL97 and PLATON.
Supporting information
10.1107/S1600536811004880/ng5116sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811004880/ng5116Isup2.hkl
To a mixture of ninhydrin (1mmol), sarcosine (1mmol) and 2-napthalidene- 1,2,3,4-tetrahydronaphthalene-1-ones (1mmol) was added and heated under reflux in methanol (20ml) until the disappearance of the starting materials as evidenced by TLC. The solvent was removed under vacuo. The crude product was subjected to
using petroleum ether-ethyl acetate as Single crystals were grown by slow evaporation from methanol.H atoms were placed in idealized positions and allowed to ride on their parent atoms, with C—H distances of 0.93-0.97 Å, and Uiso(H) = 1.5Ueq(C) for methyl H and Uiso(H) = 1.2Ueq(C,N) for all other H atoms. Due to the lack of anomalous scatterers the
was not determined from the X-ray diffraction data and Friedel pairs were merged. The of (I) is unknown.Data collection: SMART (Bruker, 2001); cell
SAINT (Bruker, 2001); data reduction: SAINT (Bruker, 2001); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and PLATON (Spek, 2009); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008) and PLATON (Spek, 2009).Fig. 1. The molecular structure of the title compound, showing the atom-numbering scheme. Displacement ellipsoids are drawn at the 30% probability level | |
Fig. 2. Molecular packing of the title compound, viewed along the a axis; H-bonds are shown as dashed lines. For the sake of clarity, H atoms, not involved in hydrogen bonds, have been omitted |
C32H25NO3 | F(000) = 992 |
Mr = 471.53 | Dx = 1.311 Mg m−3 |
Orthorhombic, P212121 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2ac 2ab | Cell parameters from 18128 reflections |
a = 10.8442 (9) Å | θ = 2.2–27.7° |
b = 11.431 (1) Å | µ = 0.08 mm−1 |
c = 19.2701 (16) Å | T = 292 K |
V = 2388.7 (3) Å3 | Block, colourless |
Z = 4 | 0.24 × 0.22 × 0.20 mm |
Bruker SMART APEX CCD area-detector diffractometer | 2941 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.025 |
Graphite monochromator | θmax = 28.0°, θmin = 2.1° |
ω scans | h = −14→14 |
28122 measured reflections | k = −15→14 |
3233 independent reflections | l = −24→25 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.039 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.112 | H-atom parameters constrained |
S = 1.10 | w = 1/[σ2(Fo2) + (0.0796P)2 + 0.0432P] where P = (Fo2 + 2Fc2)/3 |
3233 reflections | (Δ/σ)max < 0.001 |
326 parameters | Δρmax = 0.23 e Å−3 |
0 restraints | Δρmin = −0.16 e Å−3 |
C32H25NO3 | V = 2388.7 (3) Å3 |
Mr = 471.53 | Z = 4 |
Orthorhombic, P212121 | Mo Kα radiation |
a = 10.8442 (9) Å | µ = 0.08 mm−1 |
b = 11.431 (1) Å | T = 292 K |
c = 19.2701 (16) Å | 0.24 × 0.22 × 0.20 mm |
Bruker SMART APEX CCD area-detector diffractometer | 2941 reflections with I > 2σ(I) |
28122 measured reflections | Rint = 0.025 |
3233 independent reflections |
R[F2 > 2σ(F2)] = 0.039 | 0 restraints |
wR(F2) = 0.112 | H-atom parameters constrained |
S = 1.10 | Δρmax = 0.23 e Å−3 |
3233 reflections | Δρmin = −0.16 e Å−3 |
326 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.39079 (16) | 0.65842 (13) | 0.26515 (8) | 0.0626 (4) | |
O2 | 0.27742 (18) | 1.00671 (13) | 0.15142 (9) | 0.0670 (4) | |
O3 | 0.19107 (14) | 0.83352 (13) | 0.03036 (7) | 0.0548 (4) | |
N1 | 0.42985 (14) | 0.79880 (14) | 0.13310 (8) | 0.0437 (3) | |
C1 | 0.32344 (15) | 0.80317 (14) | 0.17897 (8) | 0.0373 (3) | |
C2 | 0.22397 (15) | 0.73033 (13) | 0.13771 (8) | 0.0344 (3) | |
C3 | 0.30573 (15) | 0.64431 (14) | 0.09301 (8) | 0.0379 (3) | |
H3 | 0.2908 | 0.6644 | 0.0443 | 0.045* | |
C4 | 0.43936 (17) | 0.67881 (18) | 0.10855 (11) | 0.0500 (4) | |
H4A | 0.4747 | 0.6285 | 0.1439 | 0.060* | |
H4B | 0.4897 | 0.6743 | 0.0670 | 0.060* | |
C5 | 0.34951 (17) | 0.75451 (17) | 0.25266 (9) | 0.0453 (4) | |
C6 | 0.32235 (18) | 0.8468 (2) | 0.30327 (9) | 0.0526 (5) | |
C7 | 0.3266 (2) | 0.8410 (3) | 0.37595 (11) | 0.0731 (7) | |
H7 | 0.3516 | 0.7735 | 0.3989 | 0.088* | |
C8 | 0.2919 (3) | 0.9403 (4) | 0.41183 (14) | 0.0961 (12) | |
H8 | 0.2931 | 0.9388 | 0.4601 | 0.115* | |
C9 | 0.2557 (3) | 1.0410 (4) | 0.37891 (19) | 0.0943 (11) | |
H9 | 0.2323 | 1.1056 | 0.4051 | 0.113* | |
C10 | 0.2536 (2) | 1.0476 (2) | 0.30753 (15) | 0.0730 (7) | |
H10 | 0.2307 | 1.1161 | 0.2849 | 0.088* | |
C11 | 0.28692 (19) | 0.94840 (19) | 0.27055 (11) | 0.0530 (5) | |
C12 | 0.29105 (18) | 0.93236 (16) | 0.19442 (10) | 0.0463 (4) | |
C13 | 0.12866 (17) | 0.66910 (15) | 0.18410 (9) | 0.0412 (4) | |
H13A | 0.0767 | 0.6198 | 0.1554 | 0.049* | |
H13B | 0.1716 | 0.6188 | 0.2166 | 0.049* | |
C14 | 0.04745 (18) | 0.75315 (19) | 0.22442 (9) | 0.0474 (4) | |
H14A | −0.0166 | 0.7092 | 0.2480 | 0.057* | |
H14B | 0.0968 | 0.7921 | 0.2595 | 0.057* | |
C15 | −0.01132 (16) | 0.84350 (17) | 0.17879 (9) | 0.0451 (4) | |
C16 | −0.1179 (2) | 0.90178 (19) | 0.19927 (13) | 0.0607 (6) | |
H16 | −0.1524 | 0.8854 | 0.2424 | 0.073* | |
C17 | −0.17298 (18) | 0.9832 (2) | 0.15681 (15) | 0.0664 (6) | |
H17 | −0.2446 | 1.0208 | 0.1713 | 0.080* | |
C18 | −0.1227 (2) | 1.0096 (2) | 0.09295 (15) | 0.0639 (6) | |
H18 | −0.1602 | 1.0648 | 0.0644 | 0.077* | |
C19 | −0.01693 (18) | 0.95372 (18) | 0.07168 (11) | 0.0517 (4) | |
H19 | 0.0173 | 0.9716 | 0.0287 | 0.062* | |
C20 | 0.03943 (16) | 0.87038 (16) | 0.11414 (9) | 0.0417 (4) | |
C21 | 0.15470 (15) | 0.81437 (15) | 0.08854 (8) | 0.0379 (3) | |
C22 | 0.27640 (16) | 0.51479 (15) | 0.10044 (9) | 0.0392 (3) | |
C23 | 0.17262 (16) | 0.46728 (15) | 0.06386 (8) | 0.0394 (3) | |
C24 | 0.09433 (18) | 0.53423 (18) | 0.02056 (10) | 0.0481 (4) | |
H24 | 0.1111 | 0.6134 | 0.0144 | 0.058* | |
C25 | −0.0049 (2) | 0.4864 (2) | −0.01248 (12) | 0.0605 (5) | |
H25 | −0.0552 | 0.5332 | −0.0400 | 0.073* | |
C26 | −0.0314 (2) | 0.3677 (2) | −0.00510 (14) | 0.0702 (6) | |
H26 | −0.0985 | 0.3352 | −0.0281 | 0.084* | |
C27 | 0.0406 (2) | 0.3001 (2) | 0.03549 (13) | 0.0656 (6) | |
H27 | 0.0218 | 0.2211 | 0.0401 | 0.079* | |
C28 | 0.1443 (2) | 0.34598 (15) | 0.07131 (10) | 0.0480 (4) | |
C29 | 0.2201 (2) | 0.27509 (17) | 0.11260 (11) | 0.0577 (5) | |
H29 | 0.2024 | 0.1958 | 0.1169 | 0.069* | |
C30 | 0.3187 (2) | 0.32053 (19) | 0.14624 (12) | 0.0600 (5) | |
H30 | 0.3686 | 0.2725 | 0.1732 | 0.072* | |
C31 | 0.34582 (19) | 0.44138 (18) | 0.14031 (10) | 0.0509 (4) | |
H31 | 0.4130 | 0.4716 | 0.1644 | 0.061* | |
C32 | 0.54458 (19) | 0.8442 (2) | 0.16095 (12) | 0.0592 (5) | |
H32A | 0.5318 | 0.9224 | 0.1777 | 0.089* | |
H32B | 0.6061 | 0.8450 | 0.1251 | 0.089* | |
H32C | 0.5718 | 0.7954 | 0.1985 | 0.089* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0718 (9) | 0.0584 (8) | 0.0577 (8) | 0.0018 (8) | −0.0114 (7) | 0.0189 (7) |
O2 | 0.0855 (12) | 0.0406 (7) | 0.0750 (10) | 0.0010 (8) | −0.0074 (9) | 0.0104 (7) |
O3 | 0.0616 (8) | 0.0629 (8) | 0.0400 (6) | 0.0169 (7) | 0.0096 (6) | 0.0150 (6) |
N1 | 0.0374 (7) | 0.0486 (8) | 0.0451 (7) | −0.0078 (6) | 0.0025 (6) | 0.0002 (7) |
C1 | 0.0399 (8) | 0.0374 (8) | 0.0346 (7) | −0.0028 (7) | −0.0015 (6) | 0.0035 (6) |
C2 | 0.0358 (7) | 0.0346 (7) | 0.0327 (7) | −0.0020 (6) | 0.0013 (6) | 0.0028 (6) |
C3 | 0.0376 (8) | 0.0387 (8) | 0.0373 (7) | 0.0012 (6) | 0.0013 (6) | −0.0007 (6) |
C4 | 0.0375 (8) | 0.0540 (10) | 0.0584 (10) | −0.0019 (8) | 0.0070 (8) | −0.0072 (9) |
C5 | 0.0437 (9) | 0.0532 (10) | 0.0391 (8) | −0.0092 (8) | −0.0046 (7) | 0.0081 (7) |
C6 | 0.0436 (9) | 0.0732 (13) | 0.0409 (8) | −0.0159 (9) | −0.0009 (7) | −0.0064 (9) |
C7 | 0.0628 (13) | 0.115 (2) | 0.0416 (9) | −0.0265 (14) | −0.0014 (9) | −0.0075 (12) |
C8 | 0.0746 (17) | 0.162 (3) | 0.0520 (13) | −0.036 (2) | 0.0115 (13) | −0.0458 (19) |
C9 | 0.0712 (17) | 0.124 (3) | 0.0873 (19) | −0.0207 (19) | 0.0137 (15) | −0.062 (2) |
C10 | 0.0568 (12) | 0.0728 (14) | 0.0895 (17) | −0.0096 (12) | 0.0046 (12) | −0.0365 (14) |
C11 | 0.0445 (9) | 0.0590 (11) | 0.0554 (10) | −0.0092 (9) | 0.0025 (8) | −0.0154 (9) |
C12 | 0.0448 (9) | 0.0405 (8) | 0.0535 (9) | −0.0047 (8) | −0.0013 (8) | −0.0034 (8) |
C13 | 0.0425 (8) | 0.0435 (8) | 0.0377 (7) | −0.0075 (7) | 0.0048 (7) | 0.0055 (7) |
C14 | 0.0445 (8) | 0.0577 (10) | 0.0399 (8) | −0.0105 (8) | 0.0119 (7) | −0.0032 (8) |
C15 | 0.0366 (8) | 0.0483 (9) | 0.0505 (9) | −0.0072 (7) | 0.0051 (7) | −0.0137 (8) |
C16 | 0.0459 (10) | 0.0619 (12) | 0.0744 (14) | −0.0072 (9) | 0.0156 (10) | −0.0261 (11) |
C17 | 0.0381 (9) | 0.0605 (12) | 0.1007 (17) | 0.0060 (9) | 0.0001 (11) | −0.0292 (13) |
C18 | 0.0488 (10) | 0.0517 (11) | 0.0913 (17) | 0.0112 (9) | −0.0177 (11) | −0.0161 (11) |
C19 | 0.0484 (10) | 0.0489 (10) | 0.0577 (10) | 0.0064 (8) | −0.0114 (8) | −0.0061 (9) |
C20 | 0.0362 (8) | 0.0430 (8) | 0.0459 (8) | 0.0014 (7) | −0.0026 (7) | −0.0069 (7) |
C21 | 0.0363 (7) | 0.0403 (8) | 0.0370 (7) | 0.0020 (7) | 0.0021 (6) | 0.0024 (6) |
C22 | 0.0406 (8) | 0.0386 (8) | 0.0383 (7) | 0.0046 (7) | 0.0025 (7) | −0.0006 (6) |
C23 | 0.0432 (8) | 0.0371 (8) | 0.0379 (7) | 0.0018 (7) | 0.0034 (7) | −0.0026 (6) |
C24 | 0.0519 (10) | 0.0474 (9) | 0.0449 (9) | −0.0006 (8) | −0.0057 (8) | 0.0011 (7) |
C25 | 0.0532 (11) | 0.0731 (14) | 0.0551 (11) | −0.0015 (11) | −0.0117 (9) | −0.0020 (11) |
C26 | 0.0621 (13) | 0.0746 (15) | 0.0740 (15) | −0.0168 (12) | −0.0070 (11) | −0.0181 (13) |
C27 | 0.0706 (14) | 0.0475 (10) | 0.0789 (14) | −0.0110 (11) | 0.0082 (12) | −0.0151 (11) |
C28 | 0.0580 (11) | 0.0361 (8) | 0.0501 (9) | 0.0004 (8) | 0.0097 (8) | −0.0059 (7) |
C29 | 0.0759 (14) | 0.0347 (8) | 0.0625 (11) | 0.0090 (9) | 0.0135 (11) | 0.0012 (8) |
C30 | 0.0762 (14) | 0.0471 (10) | 0.0566 (11) | 0.0250 (10) | 0.0023 (11) | 0.0087 (9) |
C31 | 0.0531 (10) | 0.0507 (10) | 0.0488 (10) | 0.0124 (9) | −0.0060 (8) | −0.0002 (8) |
C32 | 0.0446 (9) | 0.0717 (13) | 0.0613 (11) | −0.0167 (10) | −0.0039 (9) | 0.0028 (11) |
O1—C5 | 1.210 (3) | C14—H14B | 0.9700 |
O2—C12 | 1.196 (2) | C15—C16 | 1.391 (3) |
O3—C21 | 1.208 (2) | C15—C20 | 1.396 (3) |
N1—C32 | 1.451 (2) | C16—C17 | 1.376 (4) |
N1—C1 | 1.454 (2) | C16—H16 | 0.9300 |
N1—C4 | 1.455 (3) | C17—C18 | 1.379 (4) |
C1—C12 | 1.547 (2) | C17—H17 | 0.9300 |
C1—C5 | 1.551 (2) | C18—C19 | 1.376 (3) |
C1—C2 | 1.578 (2) | C18—H18 | 0.9300 |
C2—C13 | 1.535 (2) | C19—C20 | 1.397 (3) |
C2—C21 | 1.544 (2) | C19—H19 | 0.9300 |
C2—C3 | 1.580 (2) | C20—C21 | 1.489 (2) |
C3—C22 | 1.521 (2) | C22—C31 | 1.364 (3) |
C3—C4 | 1.531 (2) | C22—C23 | 1.435 (2) |
C3—H3 | 0.9800 | C23—C24 | 1.415 (3) |
C4—H4A | 0.9700 | C23—C28 | 1.428 (2) |
C4—H4B | 0.9700 | C24—C25 | 1.365 (3) |
C5—C6 | 1.466 (3) | C24—H24 | 0.9300 |
C6—C11 | 1.376 (3) | C25—C26 | 1.394 (4) |
C6—C7 | 1.403 (3) | C25—H25 | 0.9300 |
C7—C8 | 1.381 (5) | C26—C27 | 1.348 (4) |
C7—H7 | 0.9300 | C26—H26 | 0.9300 |
C8—C9 | 1.372 (5) | C27—C28 | 1.419 (3) |
C8—H8 | 0.9300 | C27—H27 | 0.9300 |
C9—C10 | 1.378 (5) | C28—C29 | 1.402 (3) |
C9—H9 | 0.9300 | C29—C30 | 1.354 (3) |
C10—C11 | 1.387 (3) | C29—H29 | 0.9300 |
C10—H10 | 0.9300 | C30—C31 | 1.417 (3) |
C11—C12 | 1.479 (3) | C30—H30 | 0.9300 |
C13—C14 | 1.517 (3) | C31—H31 | 0.9300 |
C13—H13A | 0.9700 | C32—H32A | 0.9600 |
C13—H13B | 0.9700 | C32—H32B | 0.9600 |
C14—C15 | 1.499 (3) | C32—H32C | 0.9600 |
C14—H14A | 0.9700 | ||
C32—N1—C1 | 116.31 (15) | C15—C14—H14B | 109.1 |
C32—N1—C4 | 113.40 (16) | C13—C14—H14B | 109.1 |
C1—N1—C4 | 106.64 (14) | H14A—C14—H14B | 107.8 |
N1—C1—C12 | 109.27 (14) | C16—C15—C20 | 118.4 (2) |
N1—C1—C5 | 113.54 (14) | C16—C15—C14 | 121.12 (18) |
C12—C1—C5 | 101.98 (14) | C20—C15—C14 | 120.50 (16) |
N1—C1—C2 | 102.60 (12) | C17—C16—C15 | 121.1 (2) |
C12—C1—C2 | 116.46 (14) | C17—C16—H16 | 119.5 |
C5—C1—C2 | 113.37 (13) | C15—C16—H16 | 119.5 |
C13—C2—C21 | 108.26 (13) | C16—C17—C18 | 120.4 (2) |
C13—C2—C1 | 114.05 (12) | C16—C17—H17 | 119.8 |
C21—C2—C1 | 108.27 (12) | C18—C17—H17 | 119.8 |
C13—C2—C3 | 114.30 (13) | C19—C18—C17 | 119.6 (2) |
C21—C2—C3 | 109.00 (12) | C19—C18—H18 | 120.2 |
C1—C2—C3 | 102.69 (12) | C17—C18—H18 | 120.2 |
C22—C3—C4 | 115.47 (15) | C18—C19—C20 | 120.5 (2) |
C22—C3—C2 | 115.93 (13) | C18—C19—H19 | 119.8 |
C4—C3—C2 | 105.32 (13) | C20—C19—H19 | 119.8 |
C22—C3—H3 | 106.5 | C15—C20—C19 | 120.02 (17) |
C4—C3—H3 | 106.5 | C15—C20—C21 | 122.15 (17) |
C2—C3—H3 | 106.5 | C19—C20—C21 | 117.83 (16) |
N1—C4—C3 | 103.85 (14) | O3—C21—C20 | 120.24 (16) |
N1—C4—H4A | 111.0 | O3—C21—C2 | 121.55 (15) |
C3—C4—H4A | 111.0 | C20—C21—C2 | 118.21 (14) |
N1—C4—H4B | 111.0 | C31—C22—C23 | 118.48 (17) |
C3—C4—H4B | 111.0 | C31—C22—C3 | 122.43 (17) |
H4A—C4—H4B | 109.0 | C23—C22—C3 | 119.09 (15) |
O1—C5—C6 | 126.50 (17) | C24—C23—C28 | 117.09 (17) |
O1—C5—C1 | 125.10 (17) | C24—C23—C22 | 123.75 (16) |
C6—C5—C1 | 108.31 (16) | C28—C23—C22 | 119.15 (16) |
C11—C6—C7 | 120.4 (2) | C25—C24—C23 | 122.1 (2) |
C11—C6—C5 | 111.01 (16) | C25—C24—H24 | 118.9 |
C7—C6—C5 | 128.6 (2) | C23—C24—H24 | 118.9 |
C8—C7—C6 | 116.9 (3) | C24—C25—C26 | 120.3 (2) |
C8—C7—H7 | 121.5 | C24—C25—H25 | 119.9 |
C6—C7—H7 | 121.5 | C26—C25—H25 | 119.9 |
C9—C8—C7 | 122.4 (3) | C27—C26—C25 | 119.9 (2) |
C9—C8—H8 | 118.8 | C27—C26—H26 | 120.1 |
C7—C8—H8 | 118.8 | C25—C26—H26 | 120.1 |
C8—C9—C10 | 120.8 (3) | C26—C27—C28 | 121.9 (2) |
C8—C9—H9 | 119.6 | C26—C27—H27 | 119.0 |
C10—C9—H9 | 119.6 | C28—C27—H27 | 119.0 |
C9—C10—C11 | 117.7 (3) | C29—C28—C27 | 121.79 (19) |
C9—C10—H10 | 121.2 | C29—C28—C23 | 119.48 (19) |
C11—C10—H10 | 121.2 | C27—C28—C23 | 118.72 (19) |
C6—C11—C10 | 121.8 (2) | C30—C29—C28 | 120.87 (18) |
C6—C11—C12 | 109.95 (17) | C30—C29—H29 | 119.6 |
C10—C11—C12 | 128.2 (2) | C28—C29—H29 | 119.6 |
O2—C12—C11 | 126.53 (19) | C29—C30—C31 | 119.94 (19) |
O2—C12—C1 | 124.96 (17) | C29—C30—H30 | 120.0 |
C11—C12—C1 | 108.43 (16) | C31—C30—H30 | 120.0 |
C14—C13—C2 | 113.59 (14) | C22—C31—C30 | 122.0 (2) |
C14—C13—H13A | 108.8 | C22—C31—H31 | 119.0 |
C2—C13—H13A | 108.8 | C30—C31—H31 | 119.0 |
C14—C13—H13B | 108.8 | N1—C32—H32A | 109.5 |
C2—C13—H13B | 108.8 | N1—C32—H32B | 109.5 |
H13A—C13—H13B | 107.7 | H32A—C32—H32B | 109.5 |
C15—C14—C13 | 112.50 (14) | N1—C32—H32C | 109.5 |
C15—C14—H14A | 109.1 | H32A—C32—H32C | 109.5 |
C13—C14—H14A | 109.1 | H32B—C32—H32C | 109.5 |
C32—N1—C1—C12 | 64.5 (2) | C5—C1—C12—C11 | −5.58 (18) |
C4—N1—C1—C12 | −167.92 (15) | C2—C1—C12—C11 | 118.38 (16) |
C32—N1—C1—C5 | −48.6 (2) | C21—C2—C13—C14 | −55.95 (19) |
C4—N1—C1—C5 | 78.99 (18) | C1—C2—C13—C14 | 64.64 (19) |
C32—N1—C1—C2 | −171.34 (16) | C3—C2—C13—C14 | −177.63 (14) |
C4—N1—C1—C2 | −43.74 (17) | C2—C13—C14—C15 | 51.9 (2) |
N1—C1—C2—C13 | 151.52 (14) | C13—C14—C15—C16 | 157.93 (17) |
C12—C1—C2—C13 | −89.21 (17) | C13—C14—C15—C20 | −21.5 (2) |
C5—C1—C2—C13 | 28.67 (19) | C20—C15—C16—C17 | 0.6 (3) |
N1—C1—C2—C21 | −87.90 (15) | C14—C15—C16—C17 | −178.84 (18) |
C12—C1—C2—C21 | 31.37 (18) | C15—C16—C17—C18 | −0.6 (3) |
C5—C1—C2—C21 | 149.25 (14) | C16—C17—C18—C19 | 0.1 (3) |
N1—C1—C2—C3 | 27.30 (15) | C17—C18—C19—C20 | 0.3 (3) |
C12—C1—C2—C3 | 146.57 (14) | C16—C15—C20—C19 | −0.2 (3) |
C5—C1—C2—C3 | −95.55 (15) | C14—C15—C20—C19 | 179.24 (17) |
C13—C2—C3—C22 | 1.7 (2) | C16—C15—C20—C21 | 178.65 (16) |
C21—C2—C3—C22 | −119.53 (15) | C14—C15—C20—C21 | −1.9 (3) |
C1—C2—C3—C22 | 125.80 (14) | C18—C19—C20—C15 | −0.2 (3) |
C13—C2—C3—C4 | −127.23 (16) | C18—C19—C20—C21 | −179.14 (17) |
C21—C2—C3—C4 | 111.49 (16) | C15—C20—C21—O3 | 174.69 (18) |
C1—C2—C3—C4 | −3.18 (16) | C19—C20—C21—O3 | −6.4 (3) |
C32—N1—C4—C3 | 171.27 (16) | C15—C20—C21—C2 | −4.2 (2) |
C1—N1—C4—C3 | 41.97 (18) | C19—C20—C21—C2 | 174.68 (16) |
C22—C3—C4—N1 | −151.38 (14) | C13—C2—C21—O3 | −146.97 (17) |
C2—C3—C4—N1 | −22.13 (18) | C1—C2—C21—O3 | 88.92 (19) |
N1—C1—C5—O1 | −54.7 (2) | C3—C2—C21—O3 | −22.1 (2) |
C12—C1—C5—O1 | −172.11 (18) | C13—C2—C21—C20 | 31.93 (19) |
C2—C1—C5—O1 | 61.9 (2) | C1—C2—C21—C20 | −92.19 (16) |
N1—C1—C5—C6 | 122.12 (16) | C3—C2—C21—C20 | 156.82 (14) |
C12—C1—C5—C6 | 4.71 (18) | C4—C3—C22—C31 | 22.4 (2) |
C2—C1—C5—C6 | −121.30 (15) | C2—C3—C22—C31 | −101.47 (19) |
O1—C5—C6—C11 | 174.55 (19) | C4—C3—C22—C23 | −157.10 (15) |
C1—C5—C6—C11 | −2.2 (2) | C2—C3—C22—C23 | 79.05 (19) |
O1—C5—C6—C7 | −6.6 (3) | C31—C22—C23—C24 | −179.52 (17) |
C1—C5—C6—C7 | 176.6 (2) | C3—C22—C23—C24 | 0.0 (3) |
C11—C6—C7—C8 | 1.1 (3) | C31—C22—C23—C28 | 1.1 (2) |
C5—C6—C7—C8 | −177.6 (2) | C3—C22—C23—C28 | −179.40 (15) |
C6—C7—C8—C9 | −0.6 (4) | C28—C23—C24—C25 | 0.6 (3) |
C7—C8—C9—C10 | −0.6 (5) | C22—C23—C24—C25 | −178.80 (18) |
C8—C9—C10—C11 | 1.3 (4) | C23—C24—C25—C26 | −0.9 (3) |
C7—C6—C11—C10 | −0.5 (3) | C24—C25—C26—C27 | 0.8 (4) |
C5—C6—C11—C10 | 178.48 (18) | C25—C26—C27—C28 | −0.3 (4) |
C7—C6—C11—C12 | 179.53 (19) | C26—C27—C28—C29 | −179.0 (2) |
C5—C6—C11—C12 | −1.5 (2) | C26—C27—C28—C23 | −0.1 (3) |
C9—C10—C11—C6 | −0.7 (4) | C24—C23—C28—C29 | 178.86 (18) |
C9—C10—C11—C12 | 179.3 (2) | C22—C23—C28—C29 | −1.7 (3) |
C6—C11—C12—O2 | −172.2 (2) | C24—C23—C28—C27 | −0.1 (3) |
C10—C11—C12—O2 | 7.8 (4) | C22—C23—C28—C27 | 179.34 (17) |
C6—C11—C12—C1 | 4.7 (2) | C27—C28—C29—C30 | 179.9 (2) |
C10—C11—C12—C1 | −175.3 (2) | C23—C28—C29—C30 | 0.9 (3) |
N1—C1—C12—O2 | 50.9 (2) | C28—C29—C30—C31 | 0.4 (3) |
C5—C1—C12—O2 | 171.4 (2) | C23—C22—C31—C30 | 0.3 (3) |
C2—C1—C12—O2 | −64.7 (2) | C3—C22—C31—C30 | −179.19 (18) |
N1—C1—C12—C11 | −126.03 (16) | C29—C30—C31—C22 | −1.1 (3) |
Cg1 is centroid of the C1/C5/C6/C11/C12 ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
C3—H3···O3 | 0.98 | 2.23 | 2.772 (2) | 114 |
C4—H4A···O1 | 0.97 | 2.53 | 3.072 (3) | 115 |
C13—H13B···O1 | 0.97 | 2.59 | 3.246 (3) | 125 |
C29—H29···O2i | 0.93 | 2.40 | 3.218 (2) | 146 |
C17—H17···O1ii | 0.93 | 2.55 | 3.442 (3) | 163 |
C14—H14B···Cg1 | 0.97 | 2.51 | 3.146 (2) | 123 |
Symmetry codes: (i) x, y−1, z; (ii) −x, y+1/2, −z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C32H25NO3 |
Mr | 471.53 |
Crystal system, space group | Orthorhombic, P212121 |
Temperature (K) | 292 |
a, b, c (Å) | 10.8442 (9), 11.431 (1), 19.2701 (16) |
V (Å3) | 2388.7 (3) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.08 |
Crystal size (mm) | 0.24 × 0.22 × 0.20 |
Data collection | |
Diffractometer | Bruker SMART APEX CCD area-detector diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 28122, 3233, 2941 |
Rint | 0.025 |
(sin θ/λ)max (Å−1) | 0.661 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.039, 0.112, 1.10 |
No. of reflections | 3233 |
No. of parameters | 326 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.23, −0.16 |
Computer programs: SMART (Bruker, 2001), SAINT (Bruker, 2001), SHELXS97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997) and PLATON (Spek, 2009), SHELXL97 (Sheldrick, 2008) and PLATON (Spek, 2009).
Cg1 is centroid of the C1/C5/C6/C11/C12 ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
C3—H3···O3 | 0.98 | 2.23 | 2.772 (2) | 114 |
C4—H4A···O1 | 0.97 | 2.53 | 3.072 (3) | 115 |
C13—H13B···O1 | 0.97 | 2.59 | 3.246 (3) | 125 |
C29—H29···O2i | 0.93 | 2.40 | 3.218 (2) | 146 |
C17—H17···O1ii | 0.93 | 2.55 | 3.442 (3) | 163 |
C14—H14B···Cg1 | 0.97 | 2.51 | 3.146 (2) | 123 |
Symmetry codes: (i) x, y−1, z; (ii) −x, y+1/2, −z+1/2. |
Acknowledgements
SS acknowledges the Department of Science and Technology (DST), India, for providing computing facilities under the DST-Fast Track Scheme and also thanks the Vice Chancellor and management of Kalasalingam University, Krishnankoil, for their support and encouragement.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Pyrrolidine derivatives are used as norepinephrine reuptake inhibitors and 5-HT(1A) partial agonists for treating neuropsychiatric disorders including depression and anxiety (Pettersson et al., 2011). These derivatives are used as alpha-mannosidase inhibitors and with antitumor activities against hematological and solid malignancies (Bello et al., 2010). In view of these importance, we have undertaken the crystal structure determination of the title compound, a pyrrolidine derivative, and the results are presented here.
The molecular structure of (I) is illustrated in Fig. 1. The C—C bond lengths in the pyrrolidine ring are somewhat longer in particular at two spiro junctions C1 and C2 and the C—N bond lengths are somewhat shorter than normal values. This may be due to steric forces of the bulky substituents at atoms C1 and C2 of the pyrrolidine ring (Abdul Ajees et al., 2002; Selvanayagam et al., 2005).
The sum of the angles at N1 of the pyrrolidine ring [336.3°] is in accordance with sp3 hybridization. The short contacts H3···H24 (2.12 Å) and H4A···H31 (1.96 Å) result in substantial widening of the C24—C23—C22 and C31—C22—C3 bond angles [123.8 (2)° and 122.4 (2)°, respectively].
The indanedione moiety is planar with a maximum deviation of 0.051 (3) Å for atom C9. The keto O atoms O1 and O2 deviate from this system by 0.115 (2) and 0.177 (2) Å, respectively. The naphthyl group is also planar with a maximum deviation of 0.013 (2) Å for atom C30. This group is oriented at an angle of 58.9° with respect to the indanedione moiety.
Pyrrolidine ring is in an envelope conformation, with puckering parameters q2 = 0.406 (2) Å and ϕ = 5.3 (2) °, and with atom N1 deviating 0.601 (2) Å from the least-squares plane passing through the remaining four atoms (C1-C4) of that ring (Cremer & Pople, 1975). The cyclohexanone ring in the tetrahydro naphthalin ring system has a half-chair conformation with the lowest asymmetry parameters of ΔC2(C2-C13) = 0.070 (1)° (Nardelli, 1983).
The molecular structure is influenced by an intramolecular C—H···O hydrogen bonds and weak C—H···π interactions. In the molecular packing, C—H···O hydrogen bonds involving atoms C17 and O1 link symmetry related molecules to form a helical shape arrangement in the unit cell (Fig. 2 and Table 1). In addition to this another C—H···O hydrogen bonds form a C(10) chain motif in the unit cell.