metal-organic compounds
(6,6′-Dimethyl-2,2′-bipyridine-κ2N,N′)diiodidomercury(II)
aSchool of Chemistry, Damghan University, Damghan, Iran, and bIslamic Azad University, Shahr-e-Rey Branch, Tehran, Iran
*Correspondence e-mail: robabeh_alizadeh@yahoo.com
In the title complex, [HgI2(C12H12N2)], the HgII atom has a distorted tetrahedral coordination formed by two N atoms of the 6,6′-dimethyl-2,2′-bipyridine ligand and two terminal I atoms [N—Hg—N = 70.1 (2) and I—Hg—I = 130.59 (3)°]. The crystal packing features π–π contacts between the pyridine rings of adjacent molecules [centroid–centroid distance = 3.773 (5) Å] and also between a pyridine ring of one molecule and the five-membered chelate ring of an adjacent molecule [centroid–centroid distance = 3.668 (4) Å].
Related literature
For the structures of metal complexes with a 6,6′-dimethyl-2,2′-bipyridine ligand, see: Akbarzadeh Torbati et al. (2010); Alizadeh et al. (2010); Alizadeh, Kalateh, Ebadi et al. (2009); Alizadeh, Kalateh, Khoshtarkib et al. (2009); Alizadeh, Khoshtarkib et al. (2009); Itoh et al. (2005); Kou et al. (2008); Onggo et al. (2005).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2007); cell SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).
Supporting information
10.1107/S1600536811004041/ya2136sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811004041/ya2136Isup2.hkl
For the preparation of the title compound, a solution of 6,6'-dimethyl-2,2'-bipyridine (0.28 g, 1.50 mmol) in acetonitrile (10 ml) was added to a solution of HgI2 (0.68 g, 1.50 mmol) in methanol (10 ml), and the resulting colorless mixture was stirred for 30 min at 313 K. It was then left to evaporate slowly at room temperature. After six days, colorless prismatic crystals of the title compound, suitable for X-ray diffraction experiment, were isolated (yield 0.71 g; 74.1%).
All H atoms were positioned geometrically, with C—H 0.93 and 0.96 Å for aromatics and methyl hydrogen atoms, respectively, and constrained to ride on their parent atoms, with Uiso(H)=1.2Ueq. The highest residual density peak and the deepest hole (1.22 and -1.23 e A°-3) are located at distances of 0.83 and 0.82 Å from the Hg1 atom respectively.
Data collection: APEX2 (Bruker, 2007); cell
SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).[HgI2(C12H12N2)] | F(000) = 1136 |
Mr = 638.63 | Dx = 2.785 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 1223 reflections |
a = 8.8096 (18) Å | θ = 2.2–29.2° |
b = 12.025 (2) Å | µ = 14.14 mm−1 |
c = 14.693 (3) Å | T = 298 K |
β = 101.88 (3)° | Prism, colorless |
V = 1523.2 (5) Å3 | 0.16 × 0.15 × 0.12 mm |
Z = 4 |
Bruker APEXII CCD area-detector diffractometer | 4057 independent reflections |
Radiation source: fine-focus sealed tube | 3409 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.051 |
ϕ and ω scans | θmax = 29.2°, θmin = 2.2° |
Absorption correction: multi-scan (SADABS; Bruker, 2001) | h = −11→12 |
Tmin = 0.128, Tmax = 0.186 | k = −16→13 |
9361 measured reflections | l = −20→17 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.040 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.095 | H-atom parameters constrained |
S = 1.10 | w = 1/[σ2(Fo2) + (0.0397P)2 + 3.5854P] where P = (Fo2 + 2Fc2)/3 |
4057 reflections | (Δ/σ)max = 0.001 |
154 parameters | Δρmax = 1.22 e Å−3 |
0 restraints | Δρmin = −1.23 e Å−3 |
[HgI2(C12H12N2)] | V = 1523.2 (5) Å3 |
Mr = 638.63 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 8.8096 (18) Å | µ = 14.14 mm−1 |
b = 12.025 (2) Å | T = 298 K |
c = 14.693 (3) Å | 0.16 × 0.15 × 0.12 mm |
β = 101.88 (3)° |
Bruker APEXII CCD area-detector diffractometer | 4057 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2001) | 3409 reflections with I > 2σ(I) |
Tmin = 0.128, Tmax = 0.186 | Rint = 0.051 |
9361 measured reflections |
R[F2 > 2σ(F2)] = 0.040 | 0 restraints |
wR(F2) = 0.095 | H-atom parameters constrained |
S = 1.10 | Δρmax = 1.22 e Å−3 |
4057 reflections | Δρmin = −1.23 e Å−3 |
154 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.6805 (9) | 0.4904 (8) | 0.1498 (7) | 0.065 (2) | |
H1A | 0.6238 | 0.5560 | 0.1595 | 0.077* | |
H1B | 0.7749 | 0.4868 | 0.1960 | 0.077* | |
H1C | 0.6186 | 0.4258 | 0.1547 | 0.077* | |
C2 | 0.7174 (7) | 0.4943 (6) | 0.0569 (5) | 0.0493 (16) | |
C3 | 0.6678 (9) | 0.4111 (7) | −0.0091 (6) | 0.061 (2) | |
H3 | 0.6079 | 0.3520 | 0.0042 | 0.073* | |
C4 | 0.7097 (10) | 0.4188 (7) | −0.0941 (7) | 0.069 (2) | |
H4 | 0.6773 | 0.3644 | −0.1388 | 0.083* | |
C5 | 0.7983 (9) | 0.5055 (7) | −0.1137 (6) | 0.060 (2) | |
H5 | 0.8272 | 0.5100 | −0.1710 | 0.072* | |
C6 | 0.8444 (7) | 0.5869 (6) | −0.0461 (5) | 0.0478 (15) | |
C7 | 0.9441 (7) | 0.6807 (6) | −0.0608 (4) | 0.0445 (14) | |
C8 | 0.9964 (10) | 0.6955 (9) | −0.1438 (6) | 0.066 (2) | |
H8 | 0.9628 | 0.6477 | −0.1936 | 0.079* | |
C9 | 1.0961 (13) | 0.7794 (10) | −0.1518 (8) | 0.080 (3) | |
H9 | 1.1294 | 0.7900 | −0.2073 | 0.096* | |
C10 | 1.1474 (10) | 0.8489 (8) | −0.0772 (8) | 0.074 (3) | |
H10 | 1.2190 | 0.9046 | −0.0812 | 0.089* | |
C11 | 1.0915 (9) | 0.8353 (7) | 0.0045 (7) | 0.0592 (19) | |
C12 | 1.1391 (11) | 0.9092 (8) | 0.0862 (8) | 0.079 (3) | |
H12A | 1.1882 | 0.8659 | 0.1389 | 0.094* | |
H12B | 1.0493 | 0.9456 | 0.0998 | 0.094* | |
H12C | 1.2106 | 0.9640 | 0.0728 | 0.094* | |
N1 | 0.8032 (6) | 0.5792 (4) | 0.0366 (4) | 0.0399 (11) | |
N2 | 0.9903 (6) | 0.7526 (5) | 0.0104 (4) | 0.0452 (12) | |
I1 | 1.05284 (6) | 0.68838 (5) | 0.30203 (4) | 0.06506 (16) | |
I2 | 0.61128 (6) | 0.85868 (4) | 0.09788 (4) | 0.05659 (14) | |
Hg1 | 0.86805 (3) | 0.73253 (2) | 0.139654 (19) | 0.04718 (9) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.051 (4) | 0.060 (5) | 0.081 (6) | −0.010 (3) | 0.009 (4) | 0.019 (4) |
C2 | 0.041 (3) | 0.037 (3) | 0.066 (4) | 0.003 (2) | 0.003 (3) | 0.005 (3) |
C3 | 0.047 (3) | 0.045 (4) | 0.082 (6) | 0.004 (3) | −0.005 (4) | −0.010 (4) |
C4 | 0.062 (4) | 0.056 (5) | 0.077 (6) | 0.008 (4) | −0.012 (4) | −0.027 (4) |
C5 | 0.057 (4) | 0.068 (5) | 0.051 (4) | 0.014 (4) | 0.004 (3) | −0.018 (4) |
C6 | 0.041 (3) | 0.058 (4) | 0.042 (3) | 0.019 (3) | 0.002 (2) | −0.005 (3) |
C7 | 0.045 (3) | 0.051 (4) | 0.039 (3) | 0.014 (3) | 0.012 (2) | 0.006 (3) |
C8 | 0.066 (5) | 0.088 (6) | 0.047 (4) | 0.020 (4) | 0.020 (4) | 0.009 (4) |
C9 | 0.087 (6) | 0.094 (8) | 0.070 (6) | 0.019 (6) | 0.041 (5) | 0.034 (6) |
C10 | 0.062 (5) | 0.065 (6) | 0.107 (8) | 0.009 (4) | 0.046 (5) | 0.028 (5) |
C11 | 0.050 (4) | 0.045 (4) | 0.088 (6) | 0.003 (3) | 0.026 (4) | 0.017 (4) |
C12 | 0.074 (6) | 0.053 (5) | 0.116 (8) | −0.016 (4) | 0.034 (6) | −0.012 (5) |
N1 | 0.038 (2) | 0.036 (3) | 0.045 (3) | 0.005 (2) | 0.006 (2) | −0.002 (2) |
N2 | 0.045 (3) | 0.040 (3) | 0.054 (3) | 0.006 (2) | 0.021 (2) | 0.006 (2) |
I1 | 0.0656 (3) | 0.0743 (4) | 0.0493 (3) | 0.0076 (3) | −0.0020 (2) | −0.0064 (2) |
I2 | 0.0534 (2) | 0.0536 (3) | 0.0609 (3) | 0.0024 (2) | 0.0073 (2) | −0.0054 (2) |
Hg1 | 0.05023 (14) | 0.04953 (15) | 0.04286 (13) | −0.00229 (11) | 0.01209 (10) | −0.00399 (11) |
C1—C2 | 1.468 (12) | C8—C9 | 1.359 (15) |
C1—H1A | 0.9600 | C8—H8 | 0.9300 |
C1—H1B | 0.9600 | C9—C10 | 1.379 (16) |
C1—H1C | 0.9600 | C9—H9 | 0.9300 |
C2—N1 | 1.340 (9) | C10—C11 | 1.398 (13) |
C2—C3 | 1.399 (10) | C10—H10 | 0.9300 |
C3—C4 | 1.377 (14) | C11—N2 | 1.351 (9) |
C3—H3 | 0.9300 | C11—C12 | 1.483 (14) |
C4—C5 | 1.367 (13) | C12—H12A | 0.9600 |
C4—H4 | 0.9300 | C12—H12B | 0.9600 |
C5—C6 | 1.394 (10) | C12—H12C | 0.9600 |
C5—H5 | 0.9300 | N1—Hg1 | 2.380 (5) |
C6—N1 | 1.341 (9) | N2—Hg1 | 2.381 (6) |
C6—C7 | 1.473 (11) | I1—Hg1 | 2.6503 (10) |
C7—N2 | 1.354 (9) | I2—Hg1 | 2.6876 (7) |
C7—C8 | 1.401 (10) | ||
C2—C1—H1A | 109.5 | C8—C9—C10 | 119.5 (9) |
C2—C1—H1B | 109.5 | C8—C9—H9 | 120.2 |
H1A—C1—H1B | 109.5 | C10—C9—H9 | 120.2 |
C2—C1—H1C | 109.5 | C9—C10—C11 | 119.8 (9) |
H1A—C1—H1C | 109.5 | C9—C10—H10 | 120.1 |
H1B—C1—H1C | 109.5 | C11—C10—H10 | 120.1 |
N1—C2—C3 | 120.0 (8) | N2—C11—C10 | 119.7 (9) |
N1—C2—C1 | 118.4 (7) | N2—C11—C12 | 118.1 (8) |
C3—C2—C1 | 121.6 (7) | C10—C11—C12 | 122.3 (8) |
C4—C3—C2 | 118.5 (8) | C11—C12—H12A | 109.5 |
C4—C3—H3 | 120.8 | C11—C12—H12B | 109.5 |
C2—C3—H3 | 120.8 | H12A—C12—H12B | 109.5 |
C5—C4—C3 | 120.9 (8) | C11—C12—H12C | 109.5 |
C5—C4—H4 | 119.5 | H12A—C12—H12C | 109.5 |
C3—C4—H4 | 119.5 | H12B—C12—H12C | 109.5 |
C4—C5—C6 | 118.7 (8) | C2—N1—C6 | 121.6 (6) |
C4—C5—H5 | 120.6 | C2—N1—Hg1 | 121.4 (5) |
C6—C5—H5 | 120.6 | C6—N1—Hg1 | 116.7 (5) |
N1—C6—C5 | 120.2 (8) | C11—N2—C7 | 121.2 (7) |
N1—C6—C7 | 117.8 (6) | C11—N2—Hg1 | 122.6 (6) |
C5—C6—C7 | 121.9 (7) | C7—N2—Hg1 | 116.0 (4) |
N2—C7—C8 | 119.4 (7) | N1—Hg1—N2 | 70.1 (2) |
N2—C7—C6 | 118.0 (6) | N1—Hg1—I1 | 116.12 (12) |
C8—C7—C6 | 122.6 (7) | N2—Hg1—I1 | 116.33 (14) |
C9—C8—C7 | 120.3 (9) | N1—Hg1—I2 | 102.20 (12) |
C9—C8—H8 | 119.8 | N2—Hg1—I2 | 104.98 (13) |
C7—C8—H8 | 119.8 | I1—Hg1—I2 | 130.59 (3) |
N1—C2—C3—C4 | 0.3 (10) | C5—C6—N1—Hg1 | −174.1 (5) |
C1—C2—C3—C4 | −178.5 (7) | C7—C6—N1—Hg1 | 8.4 (7) |
C2—C3—C4—C5 | 0.2 (12) | C10—C11—N2—C7 | 1.4 (11) |
C3—C4—C5—C6 | −0.7 (12) | C12—C11—N2—C7 | −178.7 (7) |
C4—C5—C6—N1 | 0.6 (10) | C10—C11—N2—Hg1 | −173.7 (6) |
C4—C5—C6—C7 | 177.9 (6) | C12—C11—N2—Hg1 | 6.2 (10) |
N1—C6—C7—N2 | 1.0 (8) | C8—C7—N2—C11 | −3.1 (10) |
C5—C6—C7—N2 | −176.4 (6) | C6—C7—N2—C11 | 174.8 (6) |
N1—C6—C7—C8 | 178.7 (6) | C8—C7—N2—Hg1 | 172.3 (5) |
C5—C6—C7—C8 | 1.3 (10) | C6—C7—N2—Hg1 | −9.8 (7) |
N2—C7—C8—C9 | 1.8 (11) | C2—N1—Hg1—N2 | 176.3 (5) |
C6—C7—C8—C9 | −175.9 (8) | C6—N1—Hg1—N2 | −9.7 (4) |
C7—C8—C9—C10 | 1.1 (14) | C2—N1—Hg1—I1 | 65.9 (5) |
C8—C9—C10—C11 | −2.7 (15) | C6—N1—Hg1—I1 | −120.0 (4) |
C9—C10—C11—N2 | 1.5 (13) | C2—N1—Hg1—I2 | −82.0 (4) |
C9—C10—C11—C12 | −178.4 (9) | C6—N1—Hg1—I2 | 92.1 (4) |
C3—C2—N1—C6 | −0.4 (9) | C11—N2—Hg1—N1 | −174.6 (6) |
C1—C2—N1—C6 | 178.5 (6) | C7—N2—Hg1—N1 | 10.1 (4) |
C3—C2—N1—Hg1 | 173.4 (5) | C11—N2—Hg1—I1 | −64.5 (6) |
C1—C2—N1—Hg1 | −7.8 (8) | C7—N2—Hg1—I1 | 120.2 (4) |
C5—C6—N1—C2 | −0.1 (9) | C11—N2—Hg1—I2 | 87.6 (5) |
C7—C6—N1—C2 | −177.5 (5) | C7—N2—Hg1—I2 | −87.7 (4) |
Experimental details
Crystal data | |
Chemical formula | [HgI2(C12H12N2)] |
Mr | 638.63 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 298 |
a, b, c (Å) | 8.8096 (18), 12.025 (2), 14.693 (3) |
β (°) | 101.88 (3) |
V (Å3) | 1523.2 (5) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 14.14 |
Crystal size (mm) | 0.16 × 0.15 × 0.12 |
Data collection | |
Diffractometer | Bruker APEXII CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2001) |
Tmin, Tmax | 0.128, 0.186 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 9361, 4057, 3409 |
Rint | 0.051 |
(sin θ/λ)max (Å−1) | 0.686 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.040, 0.095, 1.10 |
No. of reflections | 4057 |
No. of parameters | 154 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 1.22, −1.23 |
Computer programs: APEX2 (Bruker, 2007), SAINT (Bruker, 2007), SHELXTL (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 1997), WinGX (Farrugia, 1999).
Acknowledgements
The authors are grateful to Damghan University for financial support.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
6,6'-Dimethyl-2,2'-bipyridine (6,6'-dmbipy) is a rather widely used bidentate ligand, and complexes of different metals with 6,6'-dmbipy have been prepared, e.g. those of cobalt (Akbarzadeh Torbati et al., 2010),cadmium (Alizadeh et al., 2010),zinc (Alizadeh, Kalateh, Ebadi et al., 2009; Alizadeh, Kalateh, Khoshtarkib et al., 2009; Alizadeh, Khoshtarkib et al., 2009), copper (Itoh et al., 2005), nickel (Kou et al., 2008), and ruthenium (Onggo et al., 2005). We report herein the synthesis and first crystal structure of the mercury complex of this ligand (Fig. 1).
The Hg1 atom has a distorted tetrahedral coordination formed by atoms N1 and N2 of the 6,6'-dimethyl-2,2'-bipyridine ligand and terminal I1 and I2 atoms [N—Hg—N 70.1 (2)°; I—Hg—I 130.59 (3)°; see Table 1 for bond lengths involving Hg1].
In the crystal structure, intermolecular /p-/p contacts (Fig. 2) between the pyridine rings and also between pyridine ring and chelate ring of the adjacent molecules may stabilize the structure: the centroid-centroid distances Cg1—Cg2i and Cg2—Cg3i are equal to 3.668 (4) and 3.773 (5)Å respectively [Cg1, Cg2 and Cg3 represent centroids of the rings (Hg1/N1/C6/C7/N2), (N1/C2—C6), and (N2/C7—C11); symmetry code (i): 2 - x,1 - y,-z].