organic compounds
Bis[(1-methyl-1H-tetrazol-5-yl)sulfanyl]methane
aCollege of Chemistry and Materials Science, Northwest University, Xi'an 710069, Shaanxi, People's Republic of China
*Correspondence e-mail: sanpingchen@126.com
The molecule of the title compound, C5H8N8S2, lies on a twofold rotation axis that relates on 1-methyltetrazolyl group to the other; the five-membered rings are twisted by 53.1 (1)°.
Related literature
For the synthesis and pharmacological activity of compounds containing tetrazole groups, see: Semenov (2002); Upadhayaya et al. (2004). For a related structure, see: Bronisz (2002).
Experimental
Crystal data
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Data collection: SMART (Bruker, 2002); cell SAINT (Bruker, 2002); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXL97.
Supporting information
10.1107/S1600536811011007/ng5140sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811011007/ng5140Isup2.hkl
Sodium hydroxide (1.7 g, 0.043 mol) was added to 5-mercapto-1-methyltetrazole (5 g, 0.043 mol) in dry dimethylsulfoxide (35 ml). The reaction mixture was stirred at 363 K for 1 h. Dichloromethane (3.1 ml, 0.0215 mol) was then added to the solution dropwise with the formation of a grey suspension. The suspension was stirred for 4 h, cooled to room temperature and filtered. The solvent was removed completely under reduced pressure. The residue was recrystallized from ethanol to give a white crystalline product (2.94 g; m.p. 353 - 354 K). Single crystals of the title compound suitable for X-ray
were isolated after a week from a solution in acetone.All H atoms were positioned geometrically (C—H = 0.96 Å for aromatic CH3 and 0.97 Å for CH2 groups, respectively) and constrained to ride on their parent atoms with Uiso(H) values set to be -1.5 of the carrier atom.
Data collection: SMART (Bruker, 2002); cell
SAINT (Bruker, 2002); data reduction: SAINT (Bruker, 2002); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).Fig. 1. A view of the molecular structure of title compound. | |
Fig. 2. The crystal packing of the title compound. |
C5H8N8S2 | F(000) = 504 |
Mr = 244.31 | Dx = 1.558 Mg m−3 Dm = 1.558 Mg m−3 Dm measured by not measured |
Orthorhombic, Pbcn | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2n 2ab | Cell parameters from 214 reflections |
a = 6.415 (3) Å | θ = 2.5–18.9° |
b = 7.314 (3) Å | µ = 0.49 mm−1 |
c = 22.204 (8) Å | T = 296 K |
V = 1041.9 (7) Å3 | Flake-like, colourless |
Z = 4 | 0.15 × 0.12 × 0.08 mm |
CBruker SMART area-detector diffractometer | 936 independent reflections |
Radiation source: fine-focus sealed tube | 482 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.118 |
ϕ and ω scans | θmax = 25.1°, θmin = 1.8° |
Absorption correction: multi-scan (SADABS; Bruker, 2002) | h = −7→7 |
Tmin = 0.930, Tmax = 0.962 | k = −8→4 |
4692 measured reflections | l = −25→26 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.063 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.108 | H-atom parameters constrained |
S = 1.21 | w = 1/[σ2(Fo2) + (0.P)2 + 0.7202P] where P = (Fo2 + 2Fc2)/3 |
936 reflections | (Δ/σ)max < 0.001 |
70 parameters | Δρmax = 0.34 e Å−3 |
0 restraints | Δρmin = −0.38 e Å−3 |
C5H8N8S2 | V = 1041.9 (7) Å3 |
Mr = 244.31 | Z = 4 |
Orthorhombic, Pbcn | Mo Kα radiation |
a = 6.415 (3) Å | µ = 0.49 mm−1 |
b = 7.314 (3) Å | T = 296 K |
c = 22.204 (8) Å | 0.15 × 0.12 × 0.08 mm |
CBruker SMART area-detector diffractometer | 936 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2002) | 482 reflections with I > 2σ(I) |
Tmin = 0.930, Tmax = 0.962 | Rint = 0.118 |
4692 measured reflections |
R[F2 > 2σ(F2)] = 0.063 | 0 restraints |
wR(F2) = 0.108 | H-atom parameters constrained |
S = 1.21 | Δρmax = 0.34 e Å−3 |
936 reflections | Δρmin = −0.38 e Å−3 |
70 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
S1 | 1.1330 (2) | 1.03366 (18) | 0.19301 (6) | 0.0521 (4) | |
N3 | 0.6134 (7) | 0.9428 (6) | 0.1121 (2) | 0.0590 (13) | |
C2 | 0.9188 (8) | 0.9782 (6) | 0.1491 (2) | 0.0391 (13) | |
N4 | 0.7207 (7) | 1.0077 (6) | 0.16107 (17) | 0.0498 (12) | |
N1 | 0.9358 (7) | 0.8966 (6) | 0.09509 (17) | 0.0463 (11) | |
C1 | 1.1179 (8) | 0.8355 (7) | 0.0621 (2) | 0.0617 (16) | |
H1A | 1.1692 | 0.9336 | 0.0375 | 0.093* | |
H1B | 1.0808 | 0.7338 | 0.0369 | 0.093* | |
H1C | 1.2242 | 0.7985 | 0.0899 | 0.093* | |
N2 | 0.7401 (8) | 0.8743 (6) | 0.07305 (18) | 0.0561 (13) | |
C3 | 1.0000 | 1.1654 (9) | 0.2500 | 0.050 (2) | |
H3A | 1.1011 | 1.2439 | 0.2697 | 0.074* | 0.50 |
H3B | 0.8989 | 1.2439 | 0.2303 | 0.074* | 0.50 |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0481 (9) | 0.0665 (10) | 0.0418 (8) | 0.0008 (8) | −0.0041 (7) | −0.0064 (7) |
N3 | 0.049 (3) | 0.061 (3) | 0.068 (3) | −0.006 (3) | −0.010 (3) | 0.001 (3) |
C2 | 0.050 (4) | 0.034 (3) | 0.033 (3) | −0.004 (3) | −0.002 (2) | 0.004 (2) |
N4 | 0.041 (3) | 0.061 (3) | 0.047 (3) | 0.002 (2) | 0.004 (2) | 0.004 (2) |
N1 | 0.051 (3) | 0.053 (3) | 0.035 (2) | −0.004 (2) | −0.003 (2) | −0.003 (2) |
C1 | 0.062 (4) | 0.075 (4) | 0.049 (3) | 0.001 (3) | 0.004 (3) | −0.012 (3) |
N2 | 0.051 (3) | 0.068 (3) | 0.050 (3) | −0.004 (3) | −0.008 (3) | 0.000 (2) |
C3 | 0.061 (6) | 0.054 (5) | 0.034 (4) | 0.000 | −0.012 (4) | 0.000 |
S1—C2 | 1.734 (5) | N1—C1 | 1.450 (6) |
S1—C3 | 1.805 (4) | C1—H1A | 0.9600 |
N3—N2 | 1.289 (5) | C1—H1B | 0.9600 |
N3—N4 | 1.372 (5) | C1—H1C | 0.9600 |
C2—N4 | 1.316 (6) | C3—S1i | 1.805 (4) |
C2—N1 | 1.343 (5) | C3—H3A | 0.9700 |
N1—N2 | 1.357 (5) | C3—H3B | 0.9700 |
C2—S1—C3 | 98.31 (19) | H1A—C1—H1B | 109.5 |
N2—N3—N4 | 110.6 (4) | N1—C1—H1C | 109.5 |
N4—C2—N1 | 109.4 (4) | H1A—C1—H1C | 109.5 |
N4—C2—S1 | 127.8 (4) | H1B—C1—H1C | 109.5 |
N1—C2—S1 | 122.8 (4) | N3—N2—N1 | 107.1 (4) |
C2—N4—N3 | 105.5 (4) | S1i—C3—S1 | 115.5 (4) |
C2—N1—N2 | 107.5 (4) | S1i—C3—H3A | 108.4 |
C2—N1—C1 | 130.8 (5) | S1—C3—H3A | 108.4 |
N2—N1—C1 | 121.7 (4) | S1i—C3—H3B | 108.4 |
N1—C1—H1A | 109.5 | S1—C3—H3B | 108.4 |
N1—C1—H1B | 109.5 | H3A—C3—H3B | 107.5 |
Symmetry code: (i) −x+2, y, −z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C5H8N8S2 |
Mr | 244.31 |
Crystal system, space group | Orthorhombic, Pbcn |
Temperature (K) | 296 |
a, b, c (Å) | 6.415 (3), 7.314 (3), 22.204 (8) |
V (Å3) | 1041.9 (7) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.49 |
Crystal size (mm) | 0.15 × 0.12 × 0.08 |
Data collection | |
Diffractometer | CBruker SMART area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2002) |
Tmin, Tmax | 0.930, 0.962 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 4692, 936, 482 |
Rint | 0.118 |
(sin θ/λ)max (Å−1) | 0.597 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.063, 0.108, 1.21 |
No. of reflections | 936 |
No. of parameters | 70 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.34, −0.38 |
Computer programs: SMART (Bruker, 2002), SAINT (Bruker, 2002), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
Acknowledgements
We gratefully acknowledge the National Science Foundation of China (No. 20873100) and the Natural Science Foundation of Shaanxi Province (No. SJ08B09).
References
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