organic compounds
5-tert-Butyl 1-ethyl 3-amino-1,4,5,6-tetrahydropyrrolo[3,4-c]pyrazole-1,5-dicarboxylate
aSchool of Chemical Engineering and Technology, Tianjin University, Tianjin 300072, People's Republic of China, and bInstitute of Medicinal Biotechnology, Chinese Academy of Medical Sciences, and Peking Union Medical College, Beijing 100050, People's Republic of China
*Correspondence e-mail: imbjxwang@gmail.com
The 13H20N4O4, contains two crystallographically independent molecules in which the dihedral angles between the fused pyrrole and pyrazole rings are 5.06 (8) and 1.12 (8)°. In the crystal, molecules are linked by intermolecular N—H⋯O and N—H⋯N hydrogen bonds into chains parallel to the b axis.
of the title compound, CRelated literature
For general background to potential anticancer kinase inhibitors, see: Fancelli et al. (2005); Gadekar et al. (1968). For the structure of a related compound synthesized by our group, see: Guo et al. (2010).
Experimental
Crystal data
|
Refinement
|
Data collection: APEX2 (Bruker, 2008); cell SAINT (Bruker, 2008); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536811013444/rz2580sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811013444/rz2580Isup2.hkl
A solution of ethyl chlorocarbonate (2.90 g, 12 mmol) in THF (30 ml) was slowly added dropwise to a mixture of tert-butyl 3-aminopyrrolo[3,4-c]pyrazole-5(1H,4H,6H)-carboxylate (3.3 g, 11 mmol) and DIEA (8.54 g, 66 mmol) in THF (60 ml) at 0~5 °C. The reaction was kept at the same temperature for 2 h, allowed to reach r.t., and stirred overnight. The obtained mixture was evaporated to dryness and the resulting residue extracted with AcOEt and water. The organic layer was separated, dried over sodium sulfate, and evaporated to dryness. The residue was purified by flash
to give 1.8 g (55%) of the title compound as a white solid. Colourless block crystals suitable for X-ray diffraction were obtained in 2 days by slow evaporation of a methanol solution.The hydrogen atoms could have been discerned in the difference Fourier map, nevertheless all H atoms were placed at calculated positions and refined as riding, with C—H = 0.96-0.97 Å, N—H = 0.86-0.90 Å, and with Uiso(H) = 1.2 Ueq(C, N) or 1.5 Ueq(C) for methyl H atoms.
Data collection: APEX2 (Bruker, 2008); cell
SAINT (Bruker, 2008); data reduction: SAINT (Bruker, 2008); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).C13H20N4O4 | Z = 4 |
Mr = 296.33 | F(000) = 632 |
Triclinic, P1 | Dx = 1.343 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 10.772 (3) Å | Cell parameters from 2737 reflections |
b = 12.180 (4) Å | θ = 2.6–28.0° |
c = 12.986 (4) Å | µ = 0.10 mm−1 |
α = 70.845 (5)° | T = 296 K |
β = 65.875 (4)° | Block, colourless |
γ = 85.821 (5)° | 0.06 × 0.05 × 0.04 mm |
V = 1465.2 (7) Å3 |
Bruker APEXII CCD diffractometer | 5102 independent reflections |
Radiation source: fine-focus sealed tube | 3915 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.026 |
ϕ and ω scans | θmax = 25.0°, θmin = 1.8° |
Absorption correction: multi-scan (SADABS; Bruker, 2008) | h = −12→10 |
Tmin = 0.994, Tmax = 0.996 | k = −12→14 |
7444 measured reflections | l = −15→10 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.047 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.128 | H-atom parameters constrained |
S = 1.03 | w = 1/[σ2(Fo2) + (0.0632P)2 + 0.4323P] where P = (Fo2 + 2Fc2)/3 |
5102 reflections | (Δ/σ)max < 0.001 |
387 parameters | Δρmax = 0.26 e Å−3 |
0 restraints | Δρmin = −0.32 e Å−3 |
C13H20N4O4 | γ = 85.821 (5)° |
Mr = 296.33 | V = 1465.2 (7) Å3 |
Triclinic, P1 | Z = 4 |
a = 10.772 (3) Å | Mo Kα radiation |
b = 12.180 (4) Å | µ = 0.10 mm−1 |
c = 12.986 (4) Å | T = 296 K |
α = 70.845 (5)° | 0.06 × 0.05 × 0.04 mm |
β = 65.875 (4)° |
Bruker APEXII CCD diffractometer | 5102 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2008) | 3915 reflections with I > 2σ(I) |
Tmin = 0.994, Tmax = 0.996 | Rint = 0.026 |
7444 measured reflections |
R[F2 > 2σ(F2)] = 0.047 | 0 restraints |
wR(F2) = 0.128 | H-atom parameters constrained |
S = 1.03 | Δρmax = 0.26 e Å−3 |
5102 reflections | Δρmin = −0.32 e Å−3 |
387 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.26829 (15) | 0.40073 (13) | 0.06447 (14) | 0.0348 (4) | |
O2 | 0.15420 (17) | 0.22918 (13) | 0.11483 (14) | 0.0383 (4) | |
O3 | 0.18836 (13) | 0.80172 (12) | 0.11637 (12) | 0.0248 (3) | |
O4 | −0.02679 (14) | 0.86224 (13) | 0.15737 (14) | 0.0303 (4) | |
O5 | 0.28280 (14) | 1.06702 (13) | 0.45631 (14) | 0.0333 (4) | |
O6 | 0.39625 (15) | 1.23659 (13) | 0.41233 (14) | 0.0348 (4) | |
O7 | 0.33735 (13) | 0.66947 (12) | 0.40945 (12) | 0.0263 (3) | |
O8 | 0.54850 (14) | 0.63169 (12) | 0.29063 (12) | 0.0264 (3) | |
N1 | 0.04383 (17) | 0.39313 (15) | 0.13325 (15) | 0.0266 (4) | |
N2 | −0.08554 (17) | 0.34058 (15) | 0.17464 (16) | 0.0278 (4) | |
N3 | 0.03062 (16) | 0.69338 (14) | 0.12056 (15) | 0.0252 (4) | |
N4 | −0.30512 (18) | 0.40713 (16) | 0.22648 (17) | 0.0334 (5) | |
H4" | −0.3627 | 0.4607 | 0.2482 | 0.050* | |
H4' | −0.3438 | 0.3339 | 0.2641 | 0.050* | |
N5 | 0.50579 (16) | 1.08232 (14) | 0.36264 (15) | 0.0240 (4) | |
N6 | 0.63493 (17) | 1.14050 (15) | 0.30111 (15) | 0.0259 (4) | |
N7 | 0.51226 (16) | 0.79033 (14) | 0.34994 (15) | 0.0238 (4) | |
N8 | 0.85181 (18) | 1.08823 (16) | 0.19749 (17) | 0.0363 (5) | |
H8' | 0.8873 | 1.1559 | 0.1818 | 0.044* | |
H8" | 0.9026 | 1.0366 | 0.1726 | 0.044* | |
C1 | 0.0358 (2) | 0.50843 (17) | 0.12258 (17) | 0.0240 (5) | |
C2 | −0.1695 (2) | 0.42522 (18) | 0.18909 (18) | 0.0265 (5) | |
C3 | −0.0945 (2) | 0.53222 (18) | 0.15632 (18) | 0.0239 (5) | |
C4 | −0.1110 (2) | 0.65547 (17) | 0.15288 (19) | 0.0252 (5) | |
H4D | −0.1435 | 0.6998 | 0.0929 | 0.030* | |
H4E | −0.1721 | 0.6611 | 0.2300 | 0.030* | |
C5 | 0.1312 (2) | 0.60819 (17) | 0.08967 (18) | 0.0247 (5) | |
H5A | 0.1848 | 0.5907 | 0.1369 | 0.030* | |
H5B | 0.1914 | 0.6337 | 0.0054 | 0.030* | |
C6 | 0.1580 (2) | 0.33069 (19) | 0.10486 (18) | 0.0289 (5) | |
C7 | 0.3986 (2) | 0.3522 (2) | 0.0194 (2) | 0.0403 (6) | |
H7A | 0.4667 | 0.4144 | −0.0399 | 0.048* | |
H7B | 0.3917 | 0.2983 | −0.0191 | 0.048* | |
C8 | 0.4422 (3) | 0.2901 (3) | 0.1178 (2) | 0.0500 (7) | |
H8D | 0.4388 | 0.3408 | 0.1619 | 0.075* | |
H8E | 0.5337 | 0.2679 | 0.0845 | 0.075* | |
H8F | 0.3822 | 0.2218 | 0.1703 | 0.075* | |
C9 | 0.0578 (2) | 0.79265 (17) | 0.13261 (18) | 0.0233 (5) | |
C10 | 0.24457 (19) | 0.90541 (17) | 0.12164 (18) | 0.0230 (5) | |
C11 | 0.3866 (2) | 0.87316 (18) | 0.10925 (19) | 0.0286 (5) | |
H11A | 0.3815 | 0.8011 | 0.1707 | 0.043* | |
H11B | 0.4315 | 0.9335 | 0.1168 | 0.043* | |
H11C | 0.4371 | 0.8643 | 0.0324 | 0.043* | |
C12 | 0.1652 (2) | 0.9233 (2) | 0.24050 (18) | 0.0303 (5) | |
H12A | 0.0756 | 0.9455 | 0.2468 | 0.046* | |
H12B | 0.2116 | 0.9837 | 0.2466 | 0.046* | |
H12C | 0.1577 | 0.8522 | 0.3038 | 0.046* | |
C13 | 0.2481 (2) | 1.00881 (18) | 0.01703 (18) | 0.0279 (5) | |
H13A | 0.2999 | 0.9927 | −0.0559 | 0.042* | |
H13B | 0.2899 | 1.0760 | 0.0166 | 0.042* | |
H13C | 0.1567 | 1.0235 | 0.0239 | 0.042* | |
C14 | 0.7175 (2) | 1.06333 (17) | 0.26074 (18) | 0.0242 (5) | |
C15 | 0.6416 (2) | 0.95619 (17) | 0.29503 (17) | 0.0223 (4) | |
C16 | 0.5126 (2) | 0.97181 (17) | 0.35743 (17) | 0.0226 (4) | |
C17 | 0.3930 (2) | 1.13870 (19) | 0.41168 (18) | 0.0272 (5) | |
C18 | 0.1527 (2) | 1.1110 (2) | 0.5106 (2) | 0.0393 (6) | |
H18A | 0.1624 | 1.1630 | 0.5500 | 0.047* | |
H18B | 0.0880 | 1.0467 | 0.5704 | 0.047* | |
C19 | 0.0999 (3) | 1.1747 (3) | 0.4194 (2) | 0.0500 (7) | |
H19A | 0.1563 | 1.2452 | 0.3675 | 0.075* | |
H19B | 0.0080 | 1.1935 | 0.4585 | 0.075* | |
H19C | 0.1014 | 1.1266 | 0.3734 | 0.075* | |
C20 | 0.4166 (2) | 0.86791 (17) | 0.40609 (18) | 0.0245 (5) | |
H20A | 0.3799 | 0.8369 | 0.4926 | 0.029* | |
H20B | 0.3426 | 0.8839 | 0.3802 | 0.029* | |
C21 | 0.65594 (19) | 0.83642 (17) | 0.28762 (18) | 0.0227 (4) | |
H21A | 0.6951 | 0.8374 | 0.2055 | 0.027* | |
H21B | 0.7108 | 0.7922 | 0.3283 | 0.027* | |
C22 | 0.4724 (2) | 0.69102 (17) | 0.34557 (17) | 0.0223 (4) | |
C23 | 0.2682 (2) | 0.55632 (18) | 0.43977 (19) | 0.0269 (5) | |
C24 | 0.3325 (2) | 0.45964 (18) | 0.5035 (2) | 0.0318 (5) | |
H24A | 0.4243 | 0.4547 | 0.4499 | 0.048* | |
H24B | 0.2809 | 0.3872 | 0.5303 | 0.048* | |
H24C | 0.3335 | 0.4753 | 0.5710 | 0.048* | |
C25 | 0.2688 (2) | 0.5414 (2) | 0.3285 (2) | 0.0366 (6) | |
H25A | 0.2313 | 0.6073 | 0.2891 | 0.055* | |
H25B | 0.2148 | 0.4717 | 0.3500 | 0.055* | |
H25C | 0.3607 | 0.5358 | 0.2756 | 0.055* | |
C26 | 0.1261 (2) | 0.5688 (2) | 0.5249 (2) | 0.0355 (6) | |
H26A | 0.1310 | 0.5911 | 0.5876 | 0.053* | |
H26B | 0.0732 | 0.4958 | 0.5588 | 0.053* | |
H26C | 0.0837 | 0.6274 | 0.4825 | 0.053* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0307 (8) | 0.0283 (9) | 0.0448 (9) | 0.0079 (7) | −0.0123 (7) | −0.0166 (7) |
O2 | 0.0497 (10) | 0.0235 (9) | 0.0474 (10) | 0.0099 (7) | −0.0223 (8) | −0.0171 (7) |
O3 | 0.0228 (7) | 0.0174 (7) | 0.0364 (8) | 0.0017 (6) | −0.0129 (6) | −0.0105 (6) |
O4 | 0.0246 (8) | 0.0212 (8) | 0.0471 (9) | 0.0035 (6) | −0.0139 (7) | −0.0151 (7) |
O5 | 0.0252 (8) | 0.0301 (9) | 0.0415 (9) | 0.0043 (7) | −0.0074 (7) | −0.0165 (7) |
O6 | 0.0394 (9) | 0.0243 (9) | 0.0429 (9) | 0.0074 (7) | −0.0140 (7) | −0.0184 (7) |
O7 | 0.0257 (8) | 0.0195 (8) | 0.0348 (8) | −0.0016 (6) | −0.0130 (6) | −0.0089 (6) |
O8 | 0.0308 (8) | 0.0185 (8) | 0.0308 (8) | 0.0028 (6) | −0.0126 (6) | −0.0094 (6) |
N1 | 0.0303 (9) | 0.0179 (9) | 0.0328 (10) | 0.0031 (7) | −0.0125 (8) | −0.0106 (8) |
N2 | 0.0319 (10) | 0.0197 (9) | 0.0331 (10) | 0.0011 (8) | −0.0137 (8) | −0.0096 (8) |
N3 | 0.0234 (9) | 0.0187 (9) | 0.0354 (10) | 0.0032 (7) | −0.0120 (8) | −0.0115 (8) |
N4 | 0.0298 (10) | 0.0221 (10) | 0.0455 (11) | −0.0031 (8) | −0.0124 (9) | −0.0103 (9) |
N5 | 0.0252 (9) | 0.0170 (9) | 0.0291 (9) | 0.0010 (7) | −0.0101 (7) | −0.0081 (7) |
N6 | 0.0258 (9) | 0.0191 (9) | 0.0313 (10) | 0.0001 (7) | −0.0100 (8) | −0.0083 (8) |
N7 | 0.0241 (9) | 0.0186 (9) | 0.0309 (9) | 0.0018 (7) | −0.0117 (7) | −0.0103 (7) |
N8 | 0.0266 (10) | 0.0200 (10) | 0.0557 (13) | −0.0013 (8) | −0.0077 (9) | −0.0156 (9) |
C1 | 0.0319 (11) | 0.0191 (11) | 0.0244 (10) | 0.0021 (9) | −0.0134 (9) | −0.0088 (9) |
C2 | 0.0340 (12) | 0.0213 (11) | 0.0256 (11) | −0.0009 (9) | −0.0134 (9) | −0.0070 (9) |
C3 | 0.0274 (11) | 0.0205 (11) | 0.0269 (11) | 0.0030 (9) | −0.0128 (9) | −0.0096 (9) |
C4 | 0.0264 (11) | 0.0188 (11) | 0.0325 (11) | 0.0003 (8) | −0.0133 (9) | −0.0090 (9) |
C5 | 0.0267 (11) | 0.0209 (11) | 0.0290 (11) | 0.0040 (9) | −0.0116 (9) | −0.0113 (9) |
C6 | 0.0391 (13) | 0.0229 (12) | 0.0278 (11) | 0.0068 (10) | −0.0148 (10) | −0.0116 (9) |
C7 | 0.0344 (13) | 0.0409 (15) | 0.0446 (14) | 0.0137 (11) | −0.0116 (11) | −0.0210 (12) |
C8 | 0.0479 (15) | 0.0555 (18) | 0.0545 (17) | 0.0147 (13) | −0.0253 (13) | −0.0244 (14) |
C9 | 0.0248 (10) | 0.0175 (10) | 0.0254 (10) | −0.0007 (9) | −0.0097 (9) | −0.0047 (8) |
C10 | 0.0221 (10) | 0.0180 (10) | 0.0280 (11) | −0.0034 (8) | −0.0092 (8) | −0.0068 (8) |
C11 | 0.0268 (11) | 0.0234 (11) | 0.0346 (12) | 0.0006 (9) | −0.0130 (9) | −0.0077 (9) |
C12 | 0.0285 (11) | 0.0338 (13) | 0.0294 (11) | −0.0005 (9) | −0.0108 (9) | −0.0118 (10) |
C13 | 0.0295 (11) | 0.0211 (11) | 0.0305 (11) | 0.0025 (9) | −0.0107 (9) | −0.0074 (9) |
C14 | 0.0284 (11) | 0.0176 (11) | 0.0270 (11) | 0.0006 (9) | −0.0122 (9) | −0.0064 (9) |
C15 | 0.0257 (11) | 0.0175 (10) | 0.0236 (10) | 0.0007 (8) | −0.0108 (9) | −0.0055 (8) |
C16 | 0.0284 (11) | 0.0180 (10) | 0.0237 (10) | 0.0017 (8) | −0.0131 (9) | −0.0064 (8) |
C17 | 0.0314 (12) | 0.0255 (12) | 0.0273 (11) | 0.0054 (9) | −0.0125 (9) | −0.0119 (9) |
C18 | 0.0292 (12) | 0.0452 (15) | 0.0402 (13) | 0.0077 (11) | −0.0044 (10) | −0.0234 (12) |
C19 | 0.0383 (14) | 0.0593 (18) | 0.0593 (17) | 0.0192 (13) | −0.0192 (13) | −0.0320 (15) |
C20 | 0.0247 (10) | 0.0210 (11) | 0.0285 (11) | 0.0015 (8) | −0.0103 (9) | −0.0096 (9) |
C21 | 0.0246 (10) | 0.0169 (10) | 0.0267 (11) | 0.0009 (8) | −0.0110 (9) | −0.0065 (8) |
C22 | 0.0276 (11) | 0.0186 (10) | 0.0225 (10) | −0.0001 (9) | −0.0148 (9) | −0.0027 (8) |
C23 | 0.0323 (11) | 0.0185 (11) | 0.0330 (11) | −0.0043 (9) | −0.0175 (10) | −0.0054 (9) |
C24 | 0.0380 (12) | 0.0220 (12) | 0.0354 (12) | −0.0013 (10) | −0.0192 (10) | −0.0033 (10) |
C25 | 0.0477 (14) | 0.0295 (13) | 0.0372 (13) | −0.0068 (11) | −0.0231 (11) | −0.0075 (10) |
C26 | 0.0305 (12) | 0.0313 (13) | 0.0441 (13) | −0.0056 (10) | −0.0174 (10) | −0.0073 (11) |
O1—C6 | 1.327 (3) | C7—H7B | 0.9700 |
O1—C7 | 1.447 (3) | C8—H8D | 0.9600 |
O2—C6 | 1.202 (3) | C8—H8E | 0.9600 |
O3—C9 | 1.341 (2) | C8—H8F | 0.9600 |
O3—C10 | 1.473 (2) | C10—C11 | 1.507 (3) |
O4—C9 | 1.216 (2) | C10—C13 | 1.508 (3) |
O5—C17 | 1.328 (2) | C10—C12 | 1.509 (3) |
O5—C18 | 1.442 (3) | C11—H11A | 0.9600 |
O6—C17 | 1.198 (3) | C11—H11B | 0.9600 |
O7—C22 | 1.341 (2) | C11—H11C | 0.9600 |
O7—C23 | 1.471 (2) | C12—H12A | 0.9600 |
O8—C22 | 1.216 (2) | C12—H12B | 0.9600 |
N1—C1 | 1.365 (3) | C12—H12C | 0.9600 |
N1—C6 | 1.379 (3) | C13—H13A | 0.9600 |
N1—N2 | 1.390 (2) | C13—H13B | 0.9600 |
N2—C2 | 1.330 (3) | C13—H13C | 0.9600 |
N3—C9 | 1.336 (3) | C14—C15 | 1.430 (3) |
N3—C5 | 1.471 (3) | C15—C16 | 1.329 (3) |
N3—C4 | 1.472 (2) | C15—C21 | 1.486 (3) |
N4—C2 | 1.347 (3) | C16—C20 | 1.484 (3) |
N4—H4" | 0.8999 | C18—C19 | 1.486 (4) |
N4—H4' | 0.8999 | C18—H18A | 0.9700 |
N5—C16 | 1.365 (3) | C18—H18B | 0.9700 |
N5—C17 | 1.373 (3) | C19—H19A | 0.9600 |
N5—N6 | 1.393 (2) | C19—H19B | 0.9600 |
N6—C14 | 1.330 (3) | C19—H19C | 0.9600 |
N7—C22 | 1.339 (3) | C20—H20A | 0.9700 |
N7—C21 | 1.473 (2) | C20—H20B | 0.9700 |
N7—C20 | 1.477 (3) | C21—H21A | 0.9700 |
N8—C14 | 1.338 (3) | C21—H21B | 0.9700 |
N8—H8' | 0.8600 | C23—C24 | 1.504 (3) |
N8—H8" | 0.8600 | C23—C26 | 1.511 (3) |
C1—C3 | 1.329 (3) | C23—C25 | 1.512 (3) |
C1—C5 | 1.482 (3) | C24—H24A | 0.9600 |
C2—C3 | 1.429 (3) | C24—H24B | 0.9600 |
C3—C4 | 1.487 (3) | C24—H24C | 0.9600 |
C4—H4D | 0.9700 | C25—H25A | 0.9600 |
C4—H4E | 0.9700 | C25—H25B | 0.9600 |
C5—H5A | 0.9700 | C25—H25C | 0.9600 |
C5—H5B | 0.9700 | C26—H26A | 0.9600 |
C7—C8 | 1.494 (4) | C26—H26B | 0.9600 |
C7—H7A | 0.9700 | C26—H26C | 0.9600 |
C6—O1—C7 | 116.59 (18) | C10—C12—H12A | 109.5 |
C9—O3—C10 | 120.85 (15) | C10—C12—H12B | 109.5 |
C17—O5—C18 | 117.13 (18) | H12A—C12—H12B | 109.5 |
C22—O7—C23 | 121.69 (16) | C10—C12—H12C | 109.5 |
C1—N1—C6 | 128.99 (18) | H12A—C12—H12C | 109.5 |
C1—N1—N2 | 110.17 (16) | H12B—C12—H12C | 109.5 |
C6—N1—N2 | 120.78 (17) | C10—C13—H13A | 109.5 |
C2—N2—N1 | 104.91 (16) | C10—C13—H13B | 109.5 |
C9—N3—C5 | 124.64 (17) | H13A—C13—H13B | 109.5 |
C9—N3—C4 | 120.16 (17) | C10—C13—H13C | 109.5 |
C5—N3—C4 | 114.81 (15) | H13A—C13—H13C | 109.5 |
C2—N4—H4" | 121.4 | H13B—C13—H13C | 109.5 |
C2—N4—H4' | 119.3 | N6—C14—N8 | 122.08 (18) |
H4"—N4—H4' | 112.9 | N6—C14—C15 | 110.37 (17) |
C16—N5—C17 | 128.92 (17) | N8—C14—C15 | 127.55 (19) |
C16—N5—N6 | 110.18 (16) | C16—C15—C14 | 106.07 (18) |
C17—N5—N6 | 120.77 (16) | C16—C15—C21 | 111.02 (17) |
C14—N6—N5 | 104.90 (16) | C14—C15—C21 | 142.89 (19) |
C22—N7—C21 | 121.67 (17) | C15—C16—N5 | 108.47 (17) |
C22—N7—C20 | 123.51 (16) | C15—C16—C20 | 114.67 (18) |
C21—N7—C20 | 114.55 (15) | N5—C16—C20 | 136.80 (18) |
C14—N8—H8' | 120.0 | O6—C17—O5 | 126.8 (2) |
C14—N8—H8" | 120.0 | O6—C17—N5 | 124.59 (19) |
H8'—N8—H8" | 120.0 | O5—C17—N5 | 108.57 (17) |
C3—C1—N1 | 108.48 (18) | O5—C18—C19 | 110.85 (19) |
C3—C1—C5 | 114.49 (19) | O5—C18—H18A | 109.5 |
N1—C1—C5 | 136.95 (19) | C19—C18—H18A | 109.5 |
N2—C2—N4 | 121.98 (19) | O5—C18—H18B | 109.5 |
N2—C2—C3 | 110.42 (18) | C19—C18—H18B | 109.5 |
N4—C2—C3 | 127.6 (2) | H18A—C18—H18B | 108.1 |
C1—C3—C2 | 106.00 (19) | C18—C19—H19A | 109.5 |
C1—C3—C4 | 111.15 (17) | C18—C19—H19B | 109.5 |
C2—C3—C4 | 142.74 (19) | H19A—C19—H19B | 109.5 |
N3—C4—C3 | 100.28 (16) | C18—C19—H19C | 109.5 |
N3—C4—H4D | 111.7 | H19A—C19—H19C | 109.5 |
C3—C4—H4D | 111.7 | H19B—C19—H19C | 109.5 |
N3—C4—H4E | 111.7 | N7—C20—C16 | 98.60 (15) |
C3—C4—H4E | 111.7 | N7—C20—H20A | 112.0 |
H4D—C4—H4E | 109.5 | C16—C20—H20A | 112.0 |
N3—C5—C1 | 98.69 (16) | N7—C20—H20B | 112.0 |
N3—C5—H5A | 112.0 | C16—C20—H20B | 112.0 |
C1—C5—H5A | 112.0 | H20A—C20—H20B | 109.7 |
N3—C5—H5B | 112.0 | N7—C21—C15 | 100.59 (16) |
C1—C5—H5B | 112.0 | N7—C21—H21A | 111.7 |
H5A—C5—H5B | 109.7 | C15—C21—H21A | 111.7 |
O2—C6—O1 | 127.0 (2) | N7—C21—H21B | 111.7 |
O2—C6—N1 | 123.8 (2) | C15—C21—H21B | 111.7 |
O1—C6—N1 | 109.18 (18) | H21A—C21—H21B | 109.4 |
O1—C7—C8 | 111.1 (2) | O8—C22—N7 | 124.23 (18) |
O1—C7—H7A | 109.4 | O8—C22—O7 | 126.38 (18) |
C8—C7—H7A | 109.4 | N7—C22—O7 | 109.38 (18) |
O1—C7—H7B | 109.4 | O7—C23—C24 | 110.13 (16) |
C8—C7—H7B | 109.4 | O7—C23—C26 | 101.64 (17) |
H7A—C7—H7B | 108.0 | C24—C23—C26 | 109.97 (18) |
C7—C8—H8D | 109.5 | O7—C23—C25 | 109.88 (16) |
C7—C8—H8E | 109.5 | C24—C23—C25 | 112.93 (19) |
H8D—C8—H8E | 109.5 | C26—C23—C25 | 111.72 (18) |
C7—C8—H8F | 109.5 | C23—C24—H24A | 109.5 |
H8D—C8—H8F | 109.5 | C23—C24—H24B | 109.5 |
H8E—C8—H8F | 109.5 | H24A—C24—H24B | 109.5 |
O4—C9—N3 | 123.50 (18) | C23—C24—H24C | 109.5 |
O4—C9—O3 | 126.06 (18) | H24A—C24—H24C | 109.5 |
N3—C9—O3 | 110.43 (18) | H24B—C24—H24C | 109.5 |
O3—C10—C11 | 102.22 (16) | C23—C25—H25A | 109.5 |
O3—C10—C13 | 108.64 (16) | C23—C25—H25B | 109.5 |
C11—C10—C13 | 111.19 (16) | H25A—C25—H25B | 109.5 |
O3—C10—C12 | 111.02 (15) | C23—C25—H25C | 109.5 |
C11—C10—C12 | 110.14 (18) | H25A—C25—H25C | 109.5 |
C13—C10—C12 | 113.09 (18) | H25B—C25—H25C | 109.5 |
C10—C11—H11A | 109.5 | C23—C26—H26A | 109.5 |
C10—C11—H11B | 109.5 | C23—C26—H26B | 109.5 |
H11A—C11—H11B | 109.5 | H26A—C26—H26B | 109.5 |
C10—C11—H11C | 109.5 | C23—C26—H26C | 109.5 |
H11A—C11—H11C | 109.5 | H26A—C26—H26C | 109.5 |
H11B—C11—H11C | 109.5 | H26B—C26—H26C | 109.5 |
C1—N1—N2—C2 | −0.5 (2) | C9—O3—C10—C13 | −67.0 (2) |
C6—N1—N2—C2 | −178.02 (18) | C9—O3—C10—C12 | 58.0 (2) |
C16—N5—N6—C14 | −0.5 (2) | N5—N6—C14—N8 | −179.34 (19) |
C17—N5—N6—C14 | −176.67 (18) | N5—N6—C14—C15 | 0.6 (2) |
C6—N1—C1—C3 | 177.6 (2) | N6—C14—C15—C16 | −0.5 (2) |
N2—N1—C1—C3 | 0.4 (2) | N8—C14—C15—C16 | 179.4 (2) |
C6—N1—C1—C5 | −5.9 (4) | N6—C14—C15—C21 | −179.0 (3) |
N2—N1—C1—C5 | 176.8 (2) | N8—C14—C15—C21 | 0.9 (4) |
N1—N2—C2—N4 | 178.65 (18) | C14—C15—C16—N5 | 0.2 (2) |
N1—N2—C2—C3 | 0.4 (2) | C21—C15—C16—N5 | 179.20 (16) |
N1—C1—C3—C2 | −0.1 (2) | C14—C15—C16—C20 | −177.62 (17) |
C5—C1—C3—C2 | −177.45 (17) | C21—C15—C16—C20 | 1.4 (3) |
N1—C1—C3—C4 | 177.00 (17) | C17—N5—C16—C15 | 175.96 (19) |
C5—C1—C3—C4 | −0.4 (3) | N6—N5—C16—C15 | 0.2 (2) |
N2—C2—C3—C1 | −0.2 (2) | C17—N5—C16—C20 | −7.0 (4) |
N4—C2—C3—C1 | −178.3 (2) | N6—N5—C16—C20 | 177.3 (2) |
N2—C2—C3—C4 | −175.7 (3) | C18—O5—C17—O6 | 0.6 (3) |
N4—C2—C3—C4 | 6.1 (4) | C18—O5—C17—N5 | −179.03 (17) |
C9—N3—C4—C3 | −165.54 (18) | C16—N5—C17—O6 | −180.0 (2) |
C5—N3—C4—C3 | 7.5 (2) | N6—N5—C17—O6 | −4.6 (3) |
C1—C3—C4—N3 | −4.2 (2) | C16—N5—C17—O5 | −0.4 (3) |
C2—C3—C4—N3 | 171.2 (3) | N6—N5—C17—O5 | 175.03 (16) |
C9—N3—C5—C1 | 165.14 (19) | C17—O5—C18—C19 | 86.1 (3) |
C4—N3—C5—C1 | −7.6 (2) | C22—N7—C20—C16 | −166.46 (18) |
C3—C1—C5—N3 | 4.7 (2) | C21—N7—C20—C16 | 7.7 (2) |
N1—C1—C5—N3 | −171.7 (2) | C15—C16—C20—N7 | −5.4 (2) |
C7—O1—C6—O2 | 4.9 (3) | N5—C16—C20—N7 | 177.7 (2) |
C7—O1—C6—N1 | −174.19 (18) | C22—N7—C21—C15 | 167.14 (18) |
C1—N1—C6—O2 | −178.0 (2) | C20—N7—C21—C15 | −7.1 (2) |
N2—N1—C6—O2 | −0.9 (3) | C16—C15—C21—N7 | 3.3 (2) |
C1—N1—C6—O1 | 1.1 (3) | C14—C15—C21—N7 | −178.2 (3) |
N2—N1—C6—O1 | 178.17 (16) | C21—N7—C22—O8 | −0.6 (3) |
C6—O1—C7—C8 | −86.4 (2) | C20—N7—C22—O8 | 173.13 (19) |
C5—N3—C9—O4 | 179.44 (19) | C21—N7—C22—O7 | −179.94 (16) |
C4—N3—C9—O4 | −8.2 (3) | C20—N7—C22—O7 | −6.2 (3) |
C5—N3—C9—O3 | −2.0 (3) | C23—O7—C22—O8 | 12.3 (3) |
C4—N3—C9—O3 | 170.39 (16) | C23—O7—C22—N7 | −168.41 (16) |
C10—O3—C9—O4 | −3.2 (3) | C22—O7—C23—C24 | 55.5 (2) |
C10—O3—C9—N3 | 178.21 (16) | C22—O7—C23—C26 | 172.01 (17) |
C9—O3—C10—C11 | 175.42 (17) | C22—O7—C23—C25 | −69.6 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
N8—H8"···O4i | 0.86 | 2.25 | 3.069 (3) | 160 |
N8—H8′···N2ii | 0.86 | 2.26 | 3.087 (3) | 163 |
N4—H4′···N6iii | 0.90 | 2.25 | 3.104 (3) | 157 |
N4—H4"···O8iv | 0.90 | 2.36 | 3.233 (3) | 163 |
Symmetry codes: (i) x+1, y, z; (ii) x+1, y+1, z; (iii) x−1, y−1, z; (iv) x−1, y, z. |
Experimental details
Crystal data | |
Chemical formula | C13H20N4O4 |
Mr | 296.33 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 296 |
a, b, c (Å) | 10.772 (3), 12.180 (4), 12.986 (4) |
α, β, γ (°) | 70.845 (5), 65.875 (4), 85.821 (5) |
V (Å3) | 1465.2 (7) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.10 |
Crystal size (mm) | 0.06 × 0.05 × 0.04 |
Data collection | |
Diffractometer | Bruker APEXII CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2008) |
Tmin, Tmax | 0.994, 0.996 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 7444, 5102, 3915 |
Rint | 0.026 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.047, 0.128, 1.03 |
No. of reflections | 5102 |
No. of parameters | 387 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.26, −0.32 |
Computer programs: APEX2 (Bruker, 2008), SAINT (Bruker, 2008), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
N8—H8"···O4i | 0.86 | 2.25 | 3.069 (3) | 160 |
N8—H8'···N2ii | 0.86 | 2.26 | 3.087 (3) | 163 |
N4—H4'···N6iii | 0.90 | 2.25 | 3.104 (3) | 157 |
N4—H4"···O8iv | 0.90 | 2.36 | 3.233 (3) | 163 |
Symmetry codes: (i) x+1, y, z; (ii) x+1, y+1, z; (iii) x−1, y−1, z; (iv) x−1, y, z. |
Acknowledgements
This work was supported by the National Natural Science Foundation (81072577).
References
Bruker (2008). APEX2, SAINT and SADABS. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Fancelli, D., et al. (2005). J. Med. Chem. 48, 3080–3084. Web of Science CrossRef PubMed CAS Google Scholar
Gadekar, S. M., Johnson, B. D. & Cohen, E. (1968). J. Med. Chem. 11, 616–618. CrossRef CAS PubMed Web of Science Google Scholar
Guo, X., Bai, X. G., Li, Y. L. & Wang, Y. C. (2010). Acta Cryst. E66, o1108. Web of Science CSD CrossRef IUCr Journals Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
As an extension of our work (Guo et al., 2010) on the development of potential anticancer kinase inhibitors (Fancelli et al., 2005; Gadekar et al., 1968), we have synthesized the title compound and report its crystal structure herein.
The asymmetric unit of the title compound (Fig. 1) contains two crystallographically independent molecules. All bond lengths and angles have normal values. The dihedral angles between the fused pyrrole and pyrazole rings are 5.06 (8) and 1.12 (8)°. The C6/O1/O2/C7 and C9/O4/O3/C10 mean planes form dihedral angles of 5.83(0.09)° and 14.86(0.10) °, respectively, with the mean plane through N1/N2/C2/C1/C3/C4/C5/N3, whereas the O8/C22/O7/C23 and C18/O5/O6/C17 mean planes form dihedral angles of 6.20(0.12) ° and 5.12(0.13) °, respectively, with the N5/N6/C14/C15/C16/C20/C21/N7 mean plane. In the crystal structure (Fig.2), molecules are linked by intermolecular N—H···O and N—H···N hydrogen bonds (Table 1) to form chains running parallel to the b axis.