organic compounds
2-Ethyl-1H-imidazol-3-ium hemioxalate oxalic acid monohydrate
aOrdered Matter Science Research Center, College of Chemistry and Chemical Engineering, Southeast University, Nanjing 211189, People's Republic of China
*Correspondence e-mail: zhurunqiang@163.com
In the title compound, C5H9N2+·0.5C2O42−·C2H2O4·H2O, the anions, cations and water moleculars are linked by N—H⋯O and O—H⋯O hydrogen bonds which define a tightly bound three-dimensional structure. The title compound is a layered structure as viewed along the a or c axis; one layer contains water and oxalic acid molecules, the other the imidazolium cation. The C atoms of the ethyl group of the 2-ethylimidazolium cation are disordered over two positions of equal occupancy.
Related literature
For general background to ferroelectric organic frameworks, see: Fu et al. (2009); Ye et al. (2006); Zhang et al. (2008, 2010).
Experimental
Crystal data
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Refinement
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Data collection: CrystalClear (Rigaku, 2005); cell CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXL97.
Supporting information
10.1107/S1600536811020733/qm2009sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811020733/qm2009Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536811020733/qm2009Isup3.cml
A mixture of 2 - ethyl imidazole (2.4 g, 25 mmol), oxalic acid (3.15 g, 25 mmol) in water was stirred for several days at ambient temperature, Colourless sheet crystals were obtained.
Positional parameter of all the H atoms except for H7A and H7B were calculated geometrically and the H atoms were set to ride on the C atoms to which they are bonded, with Uiso(H) =1.2Ueq(C). The H7A and H7B on the O7 was freely refined.
Data collection: CrystalClear (Rigaku, 2005); cell
CrystalClear (Rigaku, 2005); data reduction: CrystalClear (Rigaku, 2005); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).Fig. 1. A partial packing diagram of the title compound, with the displacement ellipsoids were drawn at the 30% probability level. | |
Fig. 2. Packing diagram of the title compound, hydrogen bonds are shown as dashed lines. |
C5H9N2+·0.5C2O42−·C2H2O4·H2O | Z = 4 |
Mr = 249.20 | F(000) = 524.0 |
Monoclinic, P21/c | Dx = 1.444 Mg m−3 |
Hall symbol: -P 2ybc | Mo Kα radiation, λ = 0.71073 Å |
a = 6.971 (3) Å | θ = 2.3–27.5° |
b = 15.716 (7) Å | µ = 0.13 mm−1 |
c = 10.484 (4) Å | T = 293 K |
β = 93.736 (8)° | Prism, colourless |
V = 1146.1 (8) Å3 | 0.30 × 0.25 × 0.20 mm |
Rigaku SCXmini diffractometer | 2614 independent reflections |
Radiation source: fine-focus sealed tube | 2192 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.039 |
CCD_Profile_fitting scans | θmax = 27.5°, θmin = 2.9° |
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005) | h = −9→9 |
Tmin = 0.962, Tmax = 0.975 | k = −20→20 |
12371 measured reflections | l = −13→13 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.046 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.115 | w = 1/[σ2(Fo2) + (0.0549P)2 + 0.3631P] where P = (Fo2 + 2Fc2)/3 |
S = 1.08 | (Δ/σ)max < 0.001 |
2614 reflections | Δρmax = 0.35 e Å−3 |
183 parameters | Δρmin = −0.44 e Å−3 |
3 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008) |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0 |
C5H9N2+·0.5C2O42−·C2H2O4·H2O | V = 1146.1 (8) Å3 |
Mr = 249.20 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 6.971 (3) Å | µ = 0.13 mm−1 |
b = 15.716 (7) Å | T = 293 K |
c = 10.484 (4) Å | 0.30 × 0.25 × 0.20 mm |
β = 93.736 (8)° |
Rigaku SCXmini diffractometer | 2614 independent reflections |
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005) | 2192 reflections with I > 2σ(I) |
Tmin = 0.962, Tmax = 0.975 | Rint = 0.039 |
12371 measured reflections |
R[F2 > 2σ(F2)] = 0.046 | 3 restraints |
wR(F2) = 0.115 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.08 | Δρmax = 0.35 e Å−3 |
2614 reflections | Δρmin = −0.44 e Å−3 |
183 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
C1 | 0.1308 (3) | 0.28168 (12) | 0.2483 (2) | 0.0343 (4) | |
H1 | 0.0466 | 0.3066 | 0.3025 | 0.041* | |
C2 | 0.1140 (3) | 0.20420 (12) | 0.1945 (2) | 0.0364 (5) | |
H2 | 0.0158 | 0.1652 | 0.2044 | 0.044* | |
C3 | 0.3798 (4) | 0.26258 (12) | 0.1326 (2) | 0.0475 (6) | |
C6 | 0.2852 (2) | 0.51305 (9) | 0.44765 (14) | 0.0159 (3) | |
C7 | 0.1981 (2) | 0.55010 (10) | 0.56719 (14) | 0.0181 (3) | |
C8 | 0.9398 (2) | 0.49850 (10) | 0.06011 (14) | 0.0169 (3) | |
N1 | 0.2691 (3) | 0.19373 (9) | 0.12234 (15) | 0.0358 (4) | |
H1B | 0.2914 | 0.1495 | 0.0774 | 0.043* | |
N2 | 0.2952 (2) | 0.31678 (9) | 0.20807 (16) | 0.0349 (4) | |
H2A | 0.3378 | 0.3666 | 0.2286 | 0.042* | |
O1 | 0.14141 (16) | 0.48966 (7) | 0.64012 (10) | 0.0203 (3) | |
H1A | 0.0967 | 0.5104 | 0.7036 | 0.031* | |
O2 | 0.1875 (2) | 0.62570 (8) | 0.58419 (13) | 0.0393 (4) | |
O3 | 0.31598 (17) | 0.43711 (7) | 0.43807 (10) | 0.0212 (3) | |
O4 | 0.32172 (16) | 0.57027 (7) | 0.36275 (10) | 0.0201 (3) | |
H4 | 0.3622 | 0.5469 | 0.2999 | 0.030* | |
O5 | 0.76442 (16) | 0.51317 (9) | 0.04421 (11) | 0.0278 (3) | |
O6 | 1.03061 (15) | 0.48204 (8) | 0.16451 (10) | 0.0218 (3) | |
O7 | 0.54960 (17) | 0.51036 (7) | 0.82209 (11) | 0.0202 (3) | |
H7A | 0.442 (4) | 0.5011 (14) | 0.852 (2) | 0.042 (6)* | |
H7B | 0.631 (4) | 0.5075 (15) | 0.890 (3) | 0.054 (7)* | |
C4 | 0.5878 (6) | 0.2787 (2) | 0.0900 (3) | 0.0317 (8) | 0.655 (6) |
H4A | 0.6477 | 0.3251 | 0.1390 | 0.038* | 0.655 (6) |
H4B | 0.6659 | 0.2281 | 0.1040 | 0.038* | 0.655 (6) |
C5 | 0.5713 (5) | 0.3010 (2) | −0.0500 (3) | 0.0474 (11) | 0.655 (6) |
H5A | 0.6971 | 0.3114 | −0.0788 | 0.071* | 0.655 (6) |
H5B | 0.4938 | 0.3511 | −0.0627 | 0.071* | 0.655 (6) |
H5C | 0.5126 | 0.2546 | −0.0976 | 0.071* | 0.655 (6) |
C5' | 0.6915 (11) | 0.2936 (4) | 0.0908 (7) | 0.0416 (18) | 0.345 (6) |
H5'A | 0.7855 | 0.3046 | 0.0299 | 0.062* | 0.345 (6) |
H5'B | 0.7294 | 0.2445 | 0.1408 | 0.062* | 0.345 (6) |
H5'C | 0.6822 | 0.3419 | 0.1459 | 0.062* | 0.345 (6) |
C4' | 0.4958 (9) | 0.2770 (3) | 0.0199 (6) | 0.0285 (17) | 0.345 (6) |
H4'A | 0.4507 | 0.3258 | −0.0301 | 0.034* | 0.345 (6) |
H4'B | 0.4980 | 0.2272 | −0.0347 | 0.034* | 0.345 (6) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0365 (10) | 0.0252 (9) | 0.0430 (11) | 0.0018 (7) | 0.0161 (9) | −0.0093 (8) |
C2 | 0.0340 (10) | 0.0249 (9) | 0.0510 (12) | 0.0005 (8) | 0.0089 (9) | −0.0090 (9) |
C3 | 0.0680 (14) | 0.0176 (8) | 0.0619 (14) | 0.0043 (8) | 0.0436 (12) | −0.0004 (9) |
C6 | 0.0147 (7) | 0.0181 (7) | 0.0152 (7) | −0.0011 (5) | 0.0025 (5) | 0.0011 (6) |
C7 | 0.0186 (7) | 0.0197 (8) | 0.0167 (7) | 0.0002 (6) | 0.0054 (6) | −0.0007 (6) |
C8 | 0.0158 (7) | 0.0207 (7) | 0.0148 (7) | 0.0004 (6) | 0.0047 (6) | −0.0005 (6) |
N1 | 0.0606 (11) | 0.0176 (7) | 0.0312 (8) | 0.0073 (6) | 0.0169 (8) | −0.0054 (6) |
N2 | 0.0422 (9) | 0.0179 (7) | 0.0466 (10) | 0.0011 (6) | 0.0166 (8) | −0.0085 (7) |
O1 | 0.0273 (6) | 0.0199 (6) | 0.0149 (5) | 0.0002 (4) | 0.0096 (4) | 0.0004 (4) |
O2 | 0.0628 (9) | 0.0165 (6) | 0.0427 (8) | 0.0004 (6) | 0.0359 (7) | −0.0034 (5) |
O3 | 0.0300 (6) | 0.0157 (5) | 0.0188 (6) | 0.0006 (4) | 0.0085 (5) | 0.0001 (4) |
O4 | 0.0275 (6) | 0.0173 (5) | 0.0166 (5) | 0.0009 (4) | 0.0089 (4) | 0.0024 (4) |
O5 | 0.0141 (6) | 0.0540 (8) | 0.0158 (6) | 0.0034 (5) | 0.0051 (4) | 0.0023 (5) |
O6 | 0.0172 (6) | 0.0350 (7) | 0.0134 (5) | 0.0028 (5) | 0.0037 (4) | 0.0025 (5) |
O7 | 0.0159 (6) | 0.0284 (6) | 0.0168 (6) | 0.0005 (5) | 0.0046 (5) | −0.0002 (5) |
C4 | 0.0362 (17) | 0.0220 (15) | 0.0368 (16) | 0.0076 (14) | 0.0020 (19) | −0.0043 (12) |
C5 | 0.051 (2) | 0.048 (2) | 0.0449 (17) | 0.0109 (16) | 0.0211 (17) | 0.0148 (16) |
C5' | 0.028 (4) | 0.037 (4) | 0.059 (4) | −0.001 (3) | −0.001 (3) | −0.014 (3) |
C4' | 0.036 (3) | 0.023 (3) | 0.028 (4) | 0.002 (2) | 0.010 (3) | −0.002 (2) |
C1—C2 | 1.344 (3) | N2—H2A | 0.8600 |
C1—N2 | 1.363 (3) | O1—H1A | 0.8200 |
C1—H1 | 0.9300 | O4—H4 | 0.8200 |
C2—N1 | 1.369 (2) | O7—H7A | 0.84 (3) |
C2—H2 | 0.9300 | O7—H7B | 0.88 (3) |
C3—N1 | 1.329 (3) | C4—C5 | 1.505 (5) |
C3—N2 | 1.327 (2) | C4—H4A | 0.9700 |
C3—C4' | 1.491 (6) | C4—H4B | 0.9700 |
C3—C4 | 1.565 (5) | C5—H5A | 0.9600 |
C6—O3 | 1.2179 (19) | C5—H5B | 0.9600 |
C6—O4 | 1.3022 (18) | C5—H5C | 0.9600 |
C6—C7 | 1.542 (2) | C5'—C4' | 1.532 (10) |
C7—O2 | 1.204 (2) | C5'—H5'A | 0.9600 |
C7—O1 | 1.2970 (19) | C5'—H5'B | 0.9600 |
C8—O5 | 1.2449 (19) | C5'—H5'C | 0.9600 |
C8—O6 | 1.2550 (19) | C4'—H4'A | 0.9700 |
C8—C8i | 1.559 (3) | C4'—H4'B | 0.9700 |
N1—H1B | 0.8600 | ||
C2—C1—N2 | 106.81 (16) | C7—O1—H1A | 109.5 |
C2—C1—H1 | 126.6 | C6—O4—H4 | 109.5 |
N2—C1—H1 | 126.6 | H7A—O7—H7B | 104 (2) |
C1—C2—N1 | 106.87 (17) | C5—C4—C3 | 107.6 (3) |
C1—C2—H2 | 126.6 | C5—C4—H4A | 110.2 |
N1—C2—H2 | 126.6 | C3—C4—H4A | 110.2 |
N1—C3—N2 | 106.99 (18) | C5—C4—H4B | 110.2 |
N1—C3—C4' | 113.7 (3) | C3—C4—H4B | 110.2 |
N2—C3—C4' | 131.3 (3) | H4A—C4—H4B | 108.5 |
N1—C3—C4 | 130.74 (19) | C4—C5—H5A | 109.5 |
N2—C3—C4 | 121.5 (2) | C4—C5—H5B | 109.5 |
C4'—C3—C4 | 35.9 (3) | H5A—C5—H5B | 109.5 |
O3—C6—O4 | 125.24 (14) | C4—C5—H5C | 109.5 |
O3—C6—C7 | 121.20 (13) | H5A—C5—H5C | 109.5 |
O4—C6—C7 | 113.55 (13) | H5B—C5—H5C | 109.5 |
O2—C7—O1 | 127.68 (14) | C4'—C5'—H5'A | 109.5 |
O2—C7—C6 | 121.60 (14) | C4'—C5'—H5'B | 109.5 |
O1—C7—C6 | 110.71 (13) | H5'A—C5'—H5'B | 109.5 |
O5—C8—O6 | 126.16 (14) | C4'—C5'—H5'C | 109.5 |
O5—C8—C8i | 117.49 (17) | H5'A—C5'—H5'C | 109.5 |
O6—C8—C8i | 116.35 (16) | H5'B—C5'—H5'C | 109.5 |
C3—N1—C2 | 109.44 (15) | C3—C4'—C5' | 98.8 (5) |
C3—N1—H1B | 125.3 | C3—C4'—H4'A | 112.0 |
C2—N1—H1B | 125.3 | C5'—C4'—H4'A | 112.0 |
C3—N2—C1 | 109.87 (16) | C3—C4'—H4'B | 112.0 |
C3—N2—H2A | 125.1 | C5'—C4'—H4'B | 112.0 |
C1—N2—H2A | 125.1 | H4'A—C4'—H4'B | 109.7 |
Symmetry code: (i) −x+2, −y+1, −z. |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1B···O3ii | 0.86 | 2.01 | 2.855 (2) | 166 |
N1—H1B···O1ii | 0.86 | 2.53 | 3.026 (2) | 118 |
N2—H2A···O7iii | 0.86 | 2.17 | 2.949 (2) | 151 |
N2—H2A···O3 | 0.86 | 2.47 | 3.060 (2) | 126 |
O1—H1A···O6iii | 0.82 | 1.70 | 2.4800 (16) | 159 |
O4—H4···O7iii | 0.82 | 1.71 | 2.5283 (17) | 174 |
O7—H7A···O5iii | 0.84 (3) | 1.87 (3) | 2.7006 (18) | 166 (2) |
O7—H7B···O5iv | 0.88 (3) | 1.82 (3) | 2.6856 (19) | 169 (2) |
O7—H7B···O6v | 0.88 (3) | 2.47 (3) | 2.923 (2) | 113 (2) |
Symmetry codes: (ii) x, −y+1/2, z−1/2; (iii) −x+1, −y+1, −z+1; (iv) x, y, z+1; (v) −x+2, −y+1, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C5H9N2+·0.5C2O42−·C2H2O4·H2O |
Mr | 249.20 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 293 |
a, b, c (Å) | 6.971 (3), 15.716 (7), 10.484 (4) |
β (°) | 93.736 (8) |
V (Å3) | 1146.1 (8) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.13 |
Crystal size (mm) | 0.30 × 0.25 × 0.20 |
Data collection | |
Diffractometer | Rigaku SCXmini diffractometer |
Absorption correction | Multi-scan (CrystalClear; Rigaku, 2005) |
Tmin, Tmax | 0.962, 0.975 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 12371, 2614, 2192 |
Rint | 0.039 |
(sin θ/λ)max (Å−1) | 0.649 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.046, 0.115, 1.08 |
No. of reflections | 2614 |
No. of parameters | 183 |
No. of restraints | 3 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.35, −0.44 |
Computer programs: CrystalClear (Rigaku, 2005), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1B···O3i | 0.86 | 2.01 | 2.855 (2) | 166.4 |
N1—H1B···O1i | 0.86 | 2.53 | 3.026 (2) | 117.7 |
N2—H2A···O7ii | 0.86 | 2.17 | 2.949 (2) | 151.2 |
N2—H2A···O3 | 0.86 | 2.47 | 3.060 (2) | 126.2 |
O1—H1A···O6ii | 0.82 | 1.70 | 2.4800 (16) | 159.4 |
O4—H4···O7ii | 0.82 | 1.71 | 2.5283 (17) | 174.4 |
O7—H7A···O5ii | 0.84 (3) | 1.87 (3) | 2.7006 (18) | 166 (2) |
O7—H7B···O5iii | 0.88 (3) | 1.82 (3) | 2.6856 (19) | 169 (2) |
O7—H7B···O6iv | 0.88 (3) | 2.47 (3) | 2.923 (2) | 113 (2) |
Symmetry codes: (i) x, −y+1/2, z−1/2; (ii) −x+1, −y+1, −z+1; (iii) x, y, z+1; (iv) −x+2, −y+1, −z+1. |
Acknowledgements
This work was supported by Southeast University.
References
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The basic method to find potential ferroelectric phase change material is Dielectric constant measurement of compounds with temperature (Fu et al., 2009; Ye et al., 2006; Zhang et al., 2008; Zhang et al., 2010). Unfortunately, the title compound's dielectric dose not appear strange from 80 K to 298 K (m.p.219–229).
By X-ray diffraction analysis in 123 K, we can define the structure of title compound as Fig.1. Title compound, of the formula [C5H9N2] 2+ [C2O4]2-.C2H2O4.2H2O, was obtained by 2 - ethyl imidazole, oxalic acid in water in basic aqueous solution and was isolated as colourless crystals. The whole molecules are organized in a three-dimensional structure involving hydrogen bonds, both intercationic and between cations and water molecules. The O···O distances of the hydrogen bonding are observed to be in the range of 2.476 (3)–2.924 (3) Å and the N···O distances of the hydrogen bonding are in the range of 2.054 (2) - 3.059 (2) Å for table1.