organic compounds
(E)-2-Methyl-5-(thiophen-2-ylmethylidene)cyclopentan-1-one
aChemistry Department, Faculty of Science, King Abdulaziz University, PO Box 80203 Jeddah, Saudi Arabia, bCenter of Excellence for Advanced Materials Research, King Abdulaziz University, PO Box 80203 Jeddah, Saudi Arabia, and cDepartment of Chemistry, University of Malaya, 50603 Kuala Lumpur, Malaysia
*Correspondence e-mail: seikweng@um.edu.my
The exocyclic C=C double-bond in the title compound, C11H12OS, has an E configuration. The methyl-bearing C atom in the cyclopentane ring is disordered over two positions with a site-occupation factor of 0.899 (8) for the major occupied site.
Related literature
For the synthesis of 2-(2-thienylidene)cyclopentanone, see: Austin et al. (2007); Tsukerman et al. (1964).
Experimental
Crystal data
|
Data collection: CrysAlis PRO (Agilent, 2010); cell CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2010).
Supporting information
10.1107/S1600536811033708/bt5619sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811033708/bt5619Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536811033708/bt5619Isup3.cml
Thiophene-2-carboxaldehyde (1.10 g, 0.01 mol) in ethanol (20 m) was added to a solution of 2-methylcyclopentanone (0.98 g, 0.01 mol) dissolved in 20% ethanolic potassium hydroxide (20 ml). The mixture was stirred for 6 h. This was then poured into water (200 ml) and set aside for several hours. The precipitated product was collected, washed with water, dried and finallly recrystallized from ethanol to yield faint yellow crystals, 343–343 K.
Carbon-bound H atoms were placed in calculated positions [C—H 0.95–1.00 Å, Uiso(H) = 1.2–1.5Ueq(C)] and were included in the
in the riding model approximation.The methine unit is disordered over two positions with a site occupation factor of 0.899 (8) for the major occupied site. The anisotropic displacement parameters of the primed atom were set to those of the unprimed one, and they were restrained to be nearly isotropic. Pairs of Cmethine—C distances were restrained to within 0.01 Å of each other.
Data collection: CrysAlis PRO (Agilent, 2010); cell
CrysAlis PRO (Agilent, 2010); data reduction: CrysAlis PRO (Agilent, 2010); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2010).C11H12OS | F(000) = 408 |
Mr = 192.27 | Dx = 1.333 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 2335 reflections |
a = 12.0667 (5) Å | θ = 2.5–29.2° |
b = 11.0576 (4) Å | µ = 0.29 mm−1 |
c = 7.3003 (3) Å | T = 100 K |
β = 100.469 (4)° | Prism, light yellow |
V = 957.85 (7) Å3 | 0.25 × 0.15 × 0.10 mm |
Z = 4 |
Agilent SuperNova Dual diffractometer with Atlas detector | 2131 independent reflections |
Radiation source: SuperNova (Mo) X-ray Source | 1817 reflections with I > 2σ(I) |
Mirror monochromator | Rint = 0.028 |
Detector resolution: 10.4041 pixels mm-1 | θmax = 27.5°, θmin = 2.5° |
ω scans | h = −12→15 |
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2010) | k = −10→14 |
Tmin = 0.931, Tmax = 0.971 | l = −9→9 |
4842 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.041 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.104 | H-atom parameters constrained |
S = 0.99 | w = 1/[σ2(Fo2) + (0.0433P)2 + 0.8843P] where P = (Fo2 + 2Fc2)/3 |
2131 reflections | (Δ/σ)max = 0.001 |
122 parameters | Δρmax = 0.57 e Å−3 |
9 restraints | Δρmin = −0.31 e Å−3 |
C11H12OS | V = 957.85 (7) Å3 |
Mr = 192.27 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 12.0667 (5) Å | µ = 0.29 mm−1 |
b = 11.0576 (4) Å | T = 100 K |
c = 7.3003 (3) Å | 0.25 × 0.15 × 0.10 mm |
β = 100.469 (4)° |
Agilent SuperNova Dual diffractometer with Atlas detector | 2131 independent reflections |
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2010) | 1817 reflections with I > 2σ(I) |
Tmin = 0.931, Tmax = 0.971 | Rint = 0.028 |
4842 measured reflections |
R[F2 > 2σ(F2)] = 0.041 | 9 restraints |
wR(F2) = 0.104 | H-atom parameters constrained |
S = 0.99 | Δρmax = 0.57 e Å−3 |
2131 reflections | Δρmin = −0.31 e Å−3 |
122 parameters |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
S1 | 0.46249 (4) | 0.03090 (4) | 0.23692 (6) | 0.01813 (15) | |
O1 | 0.83453 (11) | 0.32223 (13) | 0.2085 (2) | 0.0294 (4) | |
C1 | 0.32149 (16) | 0.06255 (19) | 0.1851 (3) | 0.0207 (4) | |
H1 | 0.2639 | 0.0080 | 0.2046 | 0.025* | |
C2 | 0.30192 (15) | 0.17578 (18) | 0.1124 (3) | 0.0207 (4) | |
H2 | 0.2287 | 0.2089 | 0.0749 | 0.025* | |
C3 | 0.40176 (14) | 0.23853 (17) | 0.0985 (2) | 0.0172 (4) | |
H3 | 0.4028 | 0.3183 | 0.0504 | 0.021* | |
C4 | 0.49807 (15) | 0.17173 (16) | 0.1624 (2) | 0.0162 (4) | |
C5 | 0.61209 (15) | 0.21367 (17) | 0.1727 (3) | 0.0170 (4) | |
H5 | 0.6195 | 0.2946 | 0.1330 | 0.020* | |
C6 | 0.70943 (15) | 0.15444 (17) | 0.2306 (3) | 0.0181 (4) | |
C7 | 0.81999 (16) | 0.21558 (19) | 0.2394 (3) | 0.0245 (4) | |
C8 | 0.91401 (17) | 0.1245 (2) | 0.3085 (3) | 0.0251 (7) | 0.899 (8) |
H8 | 0.9358 | 0.1353 | 0.4463 | 0.030* | 0.899 (8) |
C8' | 0.8943 (7) | 0.1127 (8) | 0.187 (2) | 0.0251 (7) | 0.10 |
H8' | 0.8730 | 0.1011 | 0.0492 | 0.030* | 0.101 (8) |
C9 | 0.85457 (16) | 0.00382 (19) | 0.2756 (3) | 0.0286 (5) | |
H9A | 0.8895 | −0.0559 | 0.3697 | 0.034* | 0.899 (8) |
H9B | 0.8595 | −0.0275 | 0.1503 | 0.034* | 0.899 (8) |
H9C | 0.9009 | −0.0091 | 0.4006 | 0.034* | 0.101 (8) |
H9D | 0.8609 | −0.0687 | 0.1988 | 0.034* | 0.101 (8) |
C10 | 0.73056 (16) | 0.02545 (17) | 0.2918 (3) | 0.0197 (4) | |
H10A | 0.6799 | −0.0303 | 0.2097 | 0.024* | |
H10B | 0.7193 | 0.0143 | 0.4217 | 0.024* | |
C11 | 1.01808 (16) | 0.1430 (2) | 0.2272 (3) | 0.0321 (5) | |
H11A | 1.0501 | 0.2228 | 0.2636 | 0.048* | 0.899 (8) |
H11B | 0.9989 | 0.1381 | 0.0911 | 0.048* | 0.899 (8) |
H11C | 1.0734 | 0.0802 | 0.2738 | 0.048* | 0.899 (8) |
H11D | 1.0276 | 0.2304 | 0.2461 | 0.048* | 0.101 (8) |
H11E | 1.0528 | 0.1179 | 0.1219 | 0.048* | 0.101 (8) |
H11F | 1.0544 | 0.1004 | 0.3400 | 0.048* | 0.101 (8) |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0192 (2) | 0.0158 (2) | 0.0198 (3) | −0.00094 (17) | 0.00467 (18) | 0.00170 (18) |
O1 | 0.0229 (7) | 0.0190 (7) | 0.0480 (10) | −0.0013 (6) | 0.0112 (7) | 0.0039 (7) |
C1 | 0.0185 (9) | 0.0236 (10) | 0.0199 (9) | −0.0038 (8) | 0.0035 (7) | −0.0029 (8) |
C2 | 0.0170 (9) | 0.0231 (10) | 0.0210 (10) | 0.0008 (8) | 0.0007 (7) | −0.0021 (8) |
C3 | 0.0192 (9) | 0.0165 (9) | 0.0151 (9) | −0.0006 (7) | 0.0012 (7) | −0.0008 (7) |
C4 | 0.0197 (9) | 0.0138 (9) | 0.0158 (9) | 0.0000 (7) | 0.0047 (7) | 0.0003 (7) |
C5 | 0.0200 (9) | 0.0129 (9) | 0.0196 (9) | −0.0007 (7) | 0.0081 (7) | 0.0008 (7) |
C6 | 0.0191 (9) | 0.0159 (9) | 0.0205 (9) | −0.0012 (7) | 0.0069 (7) | −0.0027 (8) |
C7 | 0.0201 (9) | 0.0197 (10) | 0.0361 (12) | 0.0016 (8) | 0.0114 (8) | 0.0011 (9) |
C8 | 0.0195 (11) | 0.0234 (12) | 0.0330 (14) | 0.0011 (9) | 0.0060 (9) | 0.0006 (10) |
C8' | 0.0195 (11) | 0.0234 (12) | 0.0330 (14) | 0.0011 (9) | 0.0060 (9) | 0.0006 (10) |
C9 | 0.0195 (9) | 0.0220 (10) | 0.0413 (13) | 0.0022 (8) | −0.0023 (9) | 0.0031 (10) |
C10 | 0.0215 (9) | 0.0154 (9) | 0.0222 (10) | 0.0007 (7) | 0.0044 (7) | 0.0010 (8) |
C11 | 0.0176 (9) | 0.0309 (12) | 0.0485 (14) | 0.0040 (9) | 0.0074 (9) | 0.0030 (11) |
S1—C1 | 1.7107 (19) | C8—H8 | 1.0000 |
S1—C4 | 1.7293 (18) | C8'—C9 | 1.487 (9) |
O1—C7 | 1.219 (2) | C8'—C11 | 1.506 (9) |
C1—C2 | 1.364 (3) | C8'—H8' | 1.0000 |
C1—H1 | 0.9500 | C9—C10 | 1.541 (3) |
C2—C3 | 1.410 (3) | C9—H9A | 0.9900 |
C2—H2 | 0.9500 | C9—H9B | 0.9900 |
C3—C4 | 1.384 (3) | C9—H9C | 0.9900 |
C3—H3 | 0.9500 | C9—H9D | 0.9900 |
C4—C5 | 1.441 (2) | C10—H10A | 0.9900 |
C5—C6 | 1.344 (3) | C10—H10B | 0.9900 |
C5—H5 | 0.9500 | C11—H11A | 0.9800 |
C6—C7 | 1.487 (3) | C11—H11B | 0.9800 |
C6—C10 | 1.503 (3) | C11—H11C | 0.9800 |
C7—C8 | 1.533 (3) | C11—H11D | 0.9800 |
C7—C8' | 1.539 (9) | C11—H11E | 0.9800 |
C8—C11 | 1.497 (3) | C11—H11F | 0.9800 |
C8—C9 | 1.513 (3) | ||
C1—S1—C4 | 92.29 (9) | C7—C8'—H8' | 106.8 |
C2—C1—S1 | 111.64 (14) | C8'—C9—C10 | 107.6 (3) |
C2—C1—H1 | 124.2 | C8—C9—C10 | 106.86 (17) |
S1—C1—H1 | 124.2 | C8—C9—H9A | 110.3 |
C1—C2—C3 | 112.96 (17) | C10—C9—H9A | 110.3 |
C1—C2—H2 | 123.5 | C8'—C9—H9B | 78.6 |
C3—C2—H2 | 123.5 | C8—C9—H9B | 110.3 |
C4—C3—C2 | 112.91 (17) | C10—C9—H9B | 110.3 |
C4—C3—H3 | 123.5 | H9A—C9—H9B | 108.6 |
C2—C3—H3 | 123.5 | C8'—C9—H9C | 110.2 |
C3—C4—C5 | 125.52 (17) | C10—C9—H9C | 110.2 |
C3—C4—S1 | 110.19 (13) | C8'—C9—H9D | 110.2 |
C5—C4—S1 | 124.24 (14) | C10—C9—H9D | 110.2 |
C6—C5—C4 | 129.13 (17) | H9C—C9—H9D | 108.5 |
C6—C5—H5 | 115.4 | C6—C10—C9 | 103.84 (15) |
C4—C5—H5 | 115.4 | C6—C10—H10A | 111.0 |
C5—C6—C7 | 121.20 (17) | C9—C10—H10A | 111.0 |
C5—C6—C10 | 130.35 (17) | C6—C10—H10B | 111.0 |
C7—C6—C10 | 108.45 (16) | C9—C10—H10B | 111.0 |
O1—C7—C6 | 126.17 (18) | H10A—C10—H10B | 109.0 |
O1—C7—C8 | 125.02 (18) | C8—C11—H11A | 109.5 |
C6—C7—C8 | 108.67 (17) | C8—C11—H11B | 109.5 |
O1—C7—C8' | 124.0 (4) | H11A—C11—H11B | 109.5 |
C6—C7—C8' | 102.2 (4) | C8—C11—H11C | 109.5 |
C11—C8—C9 | 117.7 (2) | C8'—C11—H11C | 119.9 |
C11—C8—C7 | 113.82 (19) | H11A—C11—H11C | 109.5 |
C9—C8—C7 | 103.08 (16) | H11B—C11—H11C | 109.5 |
C11—C8—H8 | 107.2 | C8'—C11—H11D | 109.5 |
C9—C8—H8 | 107.2 | H11B—C11—H11D | 101.3 |
C7—C8—H8 | 107.2 | C8'—C11—H11E | 109.5 |
C9—C8'—C11 | 118.8 (8) | H11A—C11—H11E | 105.3 |
C9—C8'—C7 | 104.0 (6) | H11D—C11—H11E | 109.5 |
C11—C8'—C7 | 112.9 (7) | C8'—C11—H11F | 109.5 |
C9—C8'—H8' | 106.8 | H11D—C11—H11F | 109.5 |
C11—C8'—H8' | 106.8 | H11E—C11—H11F | 109.5 |
C4—S1—C1—C2 | 0.45 (16) | O1—C7—C8'—C9 | 172.1 (4) |
S1—C1—C2—C3 | −0.2 (2) | C6—C7—C8'—C9 | −36.9 (9) |
C1—C2—C3—C4 | −0.2 (2) | C8—C7—C8'—C9 | 68.5 (8) |
C2—C3—C4—C5 | −177.31 (17) | O1—C7—C8'—C11 | 42.1 (12) |
C2—C3—C4—S1 | 0.5 (2) | C6—C7—C8'—C11 | −167.0 (7) |
C1—S1—C4—C3 | −0.56 (15) | C8—C7—C8'—C11 | −61.6 (8) |
C1—S1—C4—C5 | 177.32 (16) | C11—C8'—C9—C8 | 59.1 (9) |
C3—C4—C5—C6 | −179.18 (19) | C7—C8'—C9—C8 | −67.4 (8) |
S1—C4—C5—C6 | 3.3 (3) | C11—C8'—C9—C10 | 153.4 (7) |
C4—C5—C6—C7 | −177.08 (18) | C7—C8'—C9—C10 | 27.0 (9) |
C4—C5—C6—C10 | 3.9 (3) | C11—C8—C9—C8' | −58.8 (6) |
C5—C6—C7—O1 | 4.8 (3) | C7—C8—C9—C8' | 67.4 (6) |
C10—C6—C7—O1 | −176.0 (2) | C11—C8—C9—C10 | −155.4 (2) |
C5—C6—C7—C8 | −179.48 (18) | C7—C8—C9—C10 | −29.2 (2) |
C10—C6—C7—C8 | −0.3 (2) | C5—C6—C10—C9 | 161.5 (2) |
C5—C6—C7—C8' | −145.3 (6) | C7—C6—C10—C9 | −17.6 (2) |
C10—C6—C7—C8' | 33.9 (6) | C8'—C9—C10—C6 | −6.5 (7) |
O1—C7—C8—C11 | −37.2 (3) | C8—C9—C10—C6 | 29.4 (2) |
C6—C7—C8—C11 | 146.97 (19) | C9—C8—C11—C8' | 57.6 (6) |
C8'—C7—C8—C11 | 63.0 (6) | C7—C8—C11—C8' | −63.1 (6) |
O1—C7—C8—C9 | −165.9 (2) | C9—C8'—C11—C8 | −60.2 (9) |
C6—C7—C8—C9 | 18.3 (2) | C7—C8'—C11—C8 | 61.9 (8) |
C8'—C7—C8—C9 | −65.7 (5) |
Experimental details
Crystal data | |
Chemical formula | C11H12OS |
Mr | 192.27 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 100 |
a, b, c (Å) | 12.0667 (5), 11.0576 (4), 7.3003 (3) |
β (°) | 100.469 (4) |
V (Å3) | 957.85 (7) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.29 |
Crystal size (mm) | 0.25 × 0.15 × 0.10 |
Data collection | |
Diffractometer | Agilent SuperNova Dual diffractometer with Atlas detector |
Absorption correction | Multi-scan (CrysAlis PRO; Agilent, 2010) |
Tmin, Tmax | 0.931, 0.971 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 4842, 2131, 1817 |
Rint | 0.028 |
(sin θ/λ)max (Å−1) | 0.650 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.041, 0.104, 0.99 |
No. of reflections | 2131 |
No. of parameters | 122 |
No. of restraints | 9 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.57, −0.31 |
Computer programs: CrysAlis PRO (Agilent, 2010), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), X-SEED (Barbour, 2001), publCIF (Westrip, 2010).
Acknowledgements
The authors thank King Abdulaziz University and the University of Malaya for supporting this study.
References
Agilent (2010). CrysAlis PRO. Agilent Technologies, Yarnton, Oxfordshire, England. Google Scholar
Austin, M., Egan, O. J., Tully, R. & Pratt, A. C. (2007). Org. Biomol. Chem. 5, 3778–3786. CrossRef CAS Google Scholar
Barbour, L. J. (2001). J. Supramol. Chem. 1, 189–191. CrossRef CAS Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Tsukerman, S. V., Kutulya, L. A. & Lavrushin, V. F. A. M. (1964). Zh. Obshch. Khim. 34, 3597–3605. CAS Google Scholar
Westrip, S. P. (2010). J. Appl. Cryst. 43, 920–925. Web of Science CrossRef CAS IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The α-methylene hydrogen of cyclic ketones can be abstracted by a strong base to give a carbanion that reacts with aromatic aldehydes to form a compound having a carbon-carbon double bond. Cyclopentanone has been reacted with thiophene-2-carboxaldehyde to yield 2-(2-thienyl)cyclopentanone (Austin et al., 2007; Tsukerman et al., 1964). In the present study, 2-methylcyclopentanone was used in place of the unsubstituted cyclic ketone to yield C11H12OS (Scheme I); the ketone functionality can be further reacted with, for example, primary amines, to yield other halochromic compounds. The carbon-carbon double-bond i of an E configuration. The cyclopentane ring adopts an envelope-shaped conformation whose flap is represented by the methine carbon (Fig. 1). This atom is disordered over two positions in a 90 (1):10 ratio, i.e., it lies above the plane comprising the other non-H atoms in 90% of the molecules, and below the plane in 10% of the molecules.