organic compounds
2,3-Dichloropyridine
aDepartment of Chemical Engineering, Ningbo University of Technology, Ningbo 315016, People's Republic of China, and bCollege of Chemical Engineering and Materials Science, Zhejiang University of Technology, Hangzhou 310014, People's Republic of China
*Correspondence e-mail: wengjianquan@yahoo.cn
The complete molecule of the title compound, C5H3Cl2N, is generated by crystallographic twofold symmetry, which forces the pyridine N atom and the opposite C—H group to be statistically disordered. In the crystal, weak aromatic π–π stacking [centroid–centroid separation = 3.805 (4) Å and slippage = 1.704 Å] leads to [100] stacks of molecules. Short Cl⋯Cl contacts [3.334 (3) Å] are also observed.
Related literature
For the biological activity of related compounds, see: Liu et al. (2011). For related structures, see: Ma et al. (2007), Liu & Liu (2011).
Experimental
Crystal data
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Data collection: CrystalClear (Rigaku/MSC, 2005); cell CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: CrystalStructure (Rigaku/MSC, 2005).
Supporting information
10.1107/S1600536811030261/hb5953sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811030261/hb5953Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536811030261/hb5953Isup3.cml
2,3-dichloropyridine is commercially available. Colourless prisms were grown from ethanol.
All the H atoms were positioned geometrically (C—H = 0.93Å) and refined as riding with Uiso(H) = 1.2Ueq(C)
Data collection: CrystalClear (Rigaku/MSC, 2005); cell
CrystalClear (Rigaku/MSC, 2005); data reduction: CrystalClear (Rigaku/MSC, 2005); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: CrystalStructure (Rigaku/MSC, 2005).C5H3Cl2N | F(000) = 296 |
Mr = 147.98 | Dx = 1.717 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2yc | Cell parameters from 985 reflections |
a = 3.805 (3) Å | θ = 1.9–27.8° |
b = 14.196 (12) Å | µ = 1.00 mm−1 |
c = 10.68 (1) Å | T = 113 K |
β = 97.221 (14)° | Prism, colorless |
V = 572.3 (9) Å3 | 0.36 × 0.04 × 0.04 mm |
Z = 4 |
Rigaku Saturn CCD diffractometer | 675 independent reflections |
Radiation source: rotating anode | 541 reflections with I > 2σ(I) |
Multilayer monochromator | Rint = 0.044 |
Detector resolution: 14.63 pixels mm-1 | θmax = 27.8°, θmin = 2.9° |
ω and ϕ scans | h = −4→4 |
Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005) | k = −18→18 |
Tmin = 0.714, Tmax = 0.961 | l = −13→13 |
2936 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.025 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.054 | All H-atom parameters refined |
S = 1.01 | w = 1/[σ2(Fo2) + (0.022P)2] where P = (Fo2 + 2Fc2)/3 |
675 reflections | (Δ/σ)max = 0.001 |
43 parameters | Δρmax = 0.31 e Å−3 |
2 restraints | Δρmin = −0.19 e Å−3 |
C5H3Cl2N | V = 572.3 (9) Å3 |
Mr = 147.98 | Z = 4 |
Monoclinic, C2/c | Mo Kα radiation |
a = 3.805 (3) Å | µ = 1.00 mm−1 |
b = 14.196 (12) Å | T = 113 K |
c = 10.68 (1) Å | 0.36 × 0.04 × 0.04 mm |
β = 97.221 (14)° |
Rigaku Saturn CCD diffractometer | 675 independent reflections |
Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005) | 541 reflections with I > 2σ(I) |
Tmin = 0.714, Tmax = 0.961 | Rint = 0.044 |
2936 measured reflections |
R[F2 > 2σ(F2)] = 0.025 | 2 restraints |
wR(F2) = 0.054 | All H-atom parameters refined |
S = 1.01 | Δρmax = 0.31 e Å−3 |
675 reflections | Δρmin = −0.19 e Å−3 |
43 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Cl1 | 0.26918 (10) | 0.32961 (3) | 0.61537 (4) | 0.02346 (14) | |
C1 | 0.3983 (4) | 0.43421 (10) | 0.69098 (13) | 0.0154 (3) | |
C2 | 0.2951 (3) | 0.51548 (10) | 0.63275 (12) | 0.0182 (3) | 0.50 |
H2 | 0.138 (6) | 0.514 (2) | 0.5570 (16) | 0.022* | 0.50 |
N1 | 0.2951 (3) | 0.51548 (10) | 0.63275 (12) | 0.0182 (3) | 0.50 |
C3 | 0.3971 (4) | 0.59762 (10) | 0.69191 (15) | 0.0214 (4) | |
H3 | 0.312 (4) | 0.6559 (8) | 0.6561 (15) | 0.026* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1 | 0.0279 (3) | 0.0201 (2) | 0.0216 (2) | −0.00436 (16) | 0.00026 (17) | −0.00631 (16) |
C1 | 0.0142 (8) | 0.0163 (7) | 0.0160 (7) | −0.0009 (6) | 0.0031 (6) | −0.0027 (6) |
C2 | 0.0158 (8) | 0.0235 (7) | 0.0149 (7) | −0.0009 (6) | 0.0008 (6) | 0.0016 (6) |
N1 | 0.0158 (8) | 0.0235 (7) | 0.0149 (7) | −0.0009 (6) | 0.0008 (6) | 0.0016 (6) |
C3 | 0.0184 (9) | 0.0185 (8) | 0.0269 (9) | 0.0015 (6) | 0.0012 (7) | 0.0073 (7) |
Cl1—C1 | 1.7317 (18) | C2—H2 | 0.943 (10) |
C1—C2 | 1.346 (2) | C3—C3i | 1.382 (3) |
C1—C1i | 1.394 (3) | C3—H3 | 0.951 (9) |
C2—C3 | 1.359 (2) | ||
C2—C1—C1i | 120.97 (9) | C3—C2—H2 | 122.4 (18) |
C2—C1—Cl1 | 118.07 (12) | C2—C3—C3i | 120.92 (9) |
C1i—C1—Cl1 | 120.96 (6) | C2—C3—H3 | 119.8 (10) |
C1—C2—C3 | 118.10 (14) | C3i—C3—H3 | 119.1 (10) |
C1—C2—H2 | 119.2 (18) | ||
C1i—C1—C2—C3 | 0.5 (3) | C1—C2—C3—C3i | 0.5 (3) |
Cl1—C1—C2—C3 | −179.84 (12) |
Symmetry code: (i) −x+1, y, −z+3/2. |
Experimental details
Crystal data | |
Chemical formula | C5H3Cl2N |
Mr | 147.98 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 113 |
a, b, c (Å) | 3.805 (3), 14.196 (12), 10.68 (1) |
β (°) | 97.221 (14) |
V (Å3) | 572.3 (9) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 1.00 |
Crystal size (mm) | 0.36 × 0.04 × 0.04 |
Data collection | |
Diffractometer | Rigaku Saturn CCD diffractometer |
Absorption correction | Multi-scan (CrystalClear; Rigaku/MSC, 2005) |
Tmin, Tmax | 0.714, 0.961 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 2936, 675, 541 |
Rint | 0.044 |
(sin θ/λ)max (Å−1) | 0.656 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.025, 0.054, 1.01 |
No. of reflections | 675 |
No. of parameters | 43 |
No. of restraints | 2 |
H-atom treatment | All H-atom parameters refined |
Δρmax, Δρmin (e Å−3) | 0.31, −0.19 |
Computer programs: CrystalClear (Rigaku/MSC, 2005), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008), CrystalStructure (Rigaku/MSC, 2005).
References
Liu, X.-F. & Liu, X.-H. (2011). Acta Cryst. E67, o202. Web of Science CrossRef IUCr Journals Google Scholar
Liu, X. H., Tan, C. X. & Weng, J. Q. (2011). Phosphorus Sulfur Silicon Relat. Elem. 186, 552–557. CrossRef CAS Google Scholar
Ma, H.-F., Jia, H.-S., Qian, Y., Wen, F. & Chen, B.-L. (2007). Acta Cryst. E63, o311–o312. Web of Science CSD CrossRef IUCr Journals Google Scholar
Rigaku/MSC (2005). CrystalClear and CrystalStructure. Rigaku/MSC Inc., The Woodlands, Texas, USA. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Pyridine derivatives are valuable intermidiates and various biological activities. the structure of 2,3-dichloropyridine was confirmed by X-ray crstallography. For biological activities of related compounds, see: Liu et al. (2011). For related structure, see: Ma et al. (2007), Liu et al. & Liu (2011);
Single-crystal X-ray diffraction analysis reveals that the title compound crystallizes in the monoclinic space group C2/c. As shown in Fig. 1, the pyridine ring is nearly planar [mean deviation = 0.003 Å]. As shown in Fig. 2, the crystal structure is stabilized by van der Waals' interactions.