organic compounds
2-(5,6-Dihydrobenzimidazo[1,2-c]quinazolin-6-yl)-5-methoxyphenol
aSchool of Chemical Sciences, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia, bDepartment of Chemistry, Faculty of Pure and Applied Sciences, International University of Africa, Sudan, cCrystal Materials Research Unit, Department of Chemistry, Faculty of Science, Prince of Songkla University, Hat-Yai, Songkhla 90112, Thailand, and dX-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia
*Correspondence e-mail: hkfun@usm.my
In the title quinazoline derivative, C21H17N3O2, the benzimidazole unit makes dihedral angles of 8.29 (5) and 81.79 (5)° with the benzene rings of the quinazoline and methoxyphenol units, respectively. The nitrogen-containing six-membered ring adopts a half-chair conformation. In the crystal, the molecules are linked through O—H⋯N hydrogen bonds into screw chains along the b axis; adjacent chains are further connected by N—H⋯O hydrogen bonds, thereby forming a two-dimensional network lying parallel to the bc plane. Weak C—H⋯π and π⋯π interactions with centroid–centroid distances of 3.5258 (8) and 3.7184 (7) Å are present and N⋯O [2.6816 (15) and 3.0519 (15) Å] short contacts also occur.
Related literature
For background to benzoheterocyclic derivatives and their applications, see: Arienzo et al. (2007); Chassaing et al. (2008); Galarcei et al. (2008); Kumar & Rajput (2009); Kung et al. (2009); Podunavac-Kuzmanovic & Cvetkovic (2010); Via et al. (2001); Xue et al. (2011); Zhang et al. (2009). For related structures, see: Eltayeb et al. (2007, 2009, 2011a,b). For reference bond-length data, see: Allen et al. (1987). For ring conformations, see: Cremer & Pople (1975). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2005); cell SAINT (Bruker, 2005); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).
Supporting information
10.1107/S1600536811034027/hb6371sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811034027/hb6371Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536811034027/hb6371Isup3.cml
The title compound was synthesized by adding 2-hydroxy-4-methoxybenzaldehyde (0.304 g, 2.0 mmol) to a solution of 2-(2-aminophenyl)-1H-benzimidazole (0.418 g, 2.0 mmol) in ethanol (30 mL). The mixture was refluxed with stirring for 2 hrs. The color of the resulting solution was pale-yellow. Pale-yellow blocks were formed after three weeks of slow evaporation of ethanol at room temperature.
H atom attached to O1 and N3 were located in a difference maps and refined isotropically. The remaining H atoms were positioned geometrically and allowed to ride on their parent atoms, with d(C-H) = 0.95 Å for aromatic and CH; and 0.98 Å for CH3. The Uiso values were constrained to be 1.5Ueq of the
for methyl H atoms and 1.2Ueq for the remaining H atoms. A rotating group model was used for the methyl groups. The highest residual electron density peak is located at 0.67 Å from C13 and the deepest hole is located at 0.45 Å from C14.Data collection: APEX2 (Bruker, 2005); cell
SAINT (Bruker, 2005); data reduction: SAINT (Bruker, 2005); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).C21H17N3O2 | F(000) = 720 |
Mr = 343.38 | Dx = 1.386 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 6610 reflections |
a = 9.5408 (1) Å | θ = 2.3–33.8° |
b = 15.6503 (2) Å | µ = 0.09 mm−1 |
c = 11.7609 (1) Å | T = 100 K |
β = 110.408 (1)° | Block, pale yellow |
V = 1645.87 (3) Å3 | 0.28 × 0.25 × 0.22 mm |
Z = 4 |
Bruker APEXII CCD diffractometer | 6610 independent reflections |
Radiation source: sealed tube | 4637 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.039 |
ϕ and ω scans | θmax = 33.8°, θmin = 2.3° |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | h = −14→14 |
Tmin = 0.974, Tmax = 0.980 | k = −24→22 |
31713 measured reflections | l = −18→18 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.059 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.139 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.05 | w = 1/[σ2(Fo2) + (0.0535P)2 + 0.6883P] where P = (Fo2 + 2Fc2)/3 |
6610 reflections | (Δ/σ)max = 0.001 |
244 parameters | Δρmax = 0.43 e Å−3 |
0 restraints | Δρmin = −0.30 e Å−3 |
C21H17N3O2 | V = 1645.87 (3) Å3 |
Mr = 343.38 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 9.5408 (1) Å | µ = 0.09 mm−1 |
b = 15.6503 (2) Å | T = 100 K |
c = 11.7609 (1) Å | 0.28 × 0.25 × 0.22 mm |
β = 110.408 (1)° |
Bruker APEXII CCD diffractometer | 6610 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 4637 reflections with I > 2σ(I) |
Tmin = 0.974, Tmax = 0.980 | Rint = 0.039 |
31713 measured reflections |
R[F2 > 2σ(F2)] = 0.059 | 0 restraints |
wR(F2) = 0.139 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.05 | Δρmax = 0.43 e Å−3 |
6610 reflections | Δρmin = −0.30 e Å−3 |
244 parameters |
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 120.0 (1) K. |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.14755 (11) | 0.22525 (6) | 0.27396 (8) | 0.0225 (2) | |
O2 | 0.48793 (10) | 0.20256 (6) | 0.67860 (8) | 0.01967 (19) | |
N1 | 0.09967 (11) | 0.45602 (7) | 0.26995 (9) | 0.0155 (2) | |
N2 | −0.06837 (12) | 0.56241 (7) | 0.21091 (10) | 0.0195 (2) | |
N3 | 0.32315 (12) | 0.45264 (7) | 0.22680 (10) | 0.0181 (2) | |
C1 | −0.00334 (14) | 0.44114 (8) | 0.32723 (11) | 0.0169 (2) | |
C2 | −0.01453 (15) | 0.37959 (9) | 0.40964 (12) | 0.0214 (3) | |
H2A | 0.0559 | 0.3344 | 0.4361 | 0.026* | |
C3 | −0.13327 (16) | 0.38755 (9) | 0.45104 (13) | 0.0261 (3) | |
H3A | −0.1438 | 0.3471 | 0.5078 | 0.031* | |
C4 | −0.23825 (16) | 0.45360 (10) | 0.41148 (14) | 0.0276 (3) | |
H4A | −0.3193 | 0.4562 | 0.4407 | 0.033* | |
C5 | −0.22662 (15) | 0.51499 (9) | 0.33108 (13) | 0.0251 (3) | |
H5A | −0.2975 | 0.5600 | 0.3051 | 0.030* | |
C6 | −0.10683 (14) | 0.50852 (8) | 0.28924 (11) | 0.0185 (2) | |
C7 | 0.05266 (14) | 0.52788 (8) | 0.19987 (11) | 0.0165 (2) | |
C8 | 0.13443 (14) | 0.55651 (8) | 0.12348 (11) | 0.0170 (2) | |
C9 | 0.08353 (15) | 0.62216 (8) | 0.03824 (11) | 0.0206 (3) | |
H9A | −0.0070 | 0.6510 | 0.0303 | 0.025* | |
C10 | 0.16415 (16) | 0.64543 (9) | −0.03470 (11) | 0.0230 (3) | |
H10A | 0.1282 | 0.6894 | −0.0935 | 0.028* | |
C11 | 0.29812 (16) | 0.60404 (9) | −0.02133 (11) | 0.0233 (3) | |
H11A | 0.3534 | 0.6199 | −0.0713 | 0.028* | |
C12 | 0.35181 (16) | 0.53980 (9) | 0.06425 (11) | 0.0209 (3) | |
H12A | 0.4444 | 0.5128 | 0.0737 | 0.025* | |
C13 | 0.26941 (14) | 0.51475 (8) | 0.13664 (11) | 0.0171 (2) | |
C14 | 0.21403 (13) | 0.39827 (8) | 0.25378 (10) | 0.0157 (2) | |
H14A | 0.1659 | 0.3593 | 0.1836 | 0.019* | |
C15 | 0.29119 (13) | 0.34584 (8) | 0.36554 (10) | 0.0148 (2) | |
C16 | 0.25404 (13) | 0.25964 (8) | 0.37158 (11) | 0.0159 (2) | |
C17 | 0.32374 (13) | 0.21322 (8) | 0.47774 (10) | 0.0162 (2) | |
H17A | 0.2994 | 0.1547 | 0.4821 | 0.019* | |
C18 | 0.42921 (13) | 0.25281 (8) | 0.57752 (10) | 0.0154 (2) | |
C19 | 0.46985 (14) | 0.33780 (8) | 0.57194 (11) | 0.0171 (2) | |
H19A | 0.5438 | 0.3643 | 0.6389 | 0.021* | |
C20 | 0.39884 (13) | 0.38268 (8) | 0.46523 (11) | 0.0163 (2) | |
H20A | 0.4251 | 0.4408 | 0.4605 | 0.020* | |
C21 | 0.57945 (16) | 0.24524 (10) | 0.78736 (12) | 0.0258 (3) | |
H21A | 0.6014 | 0.2060 | 0.8563 | 0.039* | |
H21B | 0.5261 | 0.2953 | 0.8016 | 0.039* | |
H21C | 0.6733 | 0.2635 | 0.7783 | 0.039* | |
H1N3 | 0.3958 (19) | 0.4194 (12) | 0.2166 (15) | 0.028 (4)* | |
H1O1 | 0.126 (2) | 0.1665 (15) | 0.291 (2) | 0.059 (6)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0248 (5) | 0.0166 (5) | 0.0191 (4) | −0.0058 (4) | −0.0014 (4) | 0.0006 (3) |
O2 | 0.0217 (4) | 0.0185 (4) | 0.0154 (4) | −0.0019 (4) | 0.0021 (3) | 0.0027 (3) |
N1 | 0.0152 (5) | 0.0139 (5) | 0.0175 (4) | 0.0018 (4) | 0.0059 (4) | 0.0019 (4) |
N2 | 0.0190 (5) | 0.0167 (5) | 0.0214 (5) | 0.0031 (4) | 0.0054 (4) | 0.0003 (4) |
N3 | 0.0185 (5) | 0.0166 (5) | 0.0214 (5) | 0.0033 (4) | 0.0098 (4) | 0.0042 (4) |
C1 | 0.0155 (5) | 0.0172 (6) | 0.0180 (5) | −0.0007 (4) | 0.0057 (4) | −0.0019 (4) |
C2 | 0.0211 (6) | 0.0196 (6) | 0.0253 (6) | 0.0019 (5) | 0.0103 (5) | 0.0025 (5) |
C3 | 0.0277 (7) | 0.0241 (7) | 0.0316 (7) | −0.0024 (6) | 0.0166 (6) | 0.0014 (5) |
C4 | 0.0239 (7) | 0.0271 (7) | 0.0378 (8) | −0.0020 (6) | 0.0184 (6) | −0.0052 (6) |
C5 | 0.0201 (6) | 0.0220 (7) | 0.0345 (7) | 0.0032 (5) | 0.0113 (5) | −0.0031 (5) |
C6 | 0.0168 (6) | 0.0164 (6) | 0.0214 (5) | 0.0010 (5) | 0.0054 (4) | −0.0025 (4) |
C7 | 0.0175 (5) | 0.0130 (5) | 0.0165 (5) | 0.0007 (4) | 0.0028 (4) | −0.0004 (4) |
C8 | 0.0203 (6) | 0.0133 (5) | 0.0160 (5) | −0.0011 (4) | 0.0048 (4) | −0.0005 (4) |
C9 | 0.0243 (6) | 0.0156 (6) | 0.0185 (5) | −0.0002 (5) | 0.0031 (5) | 0.0011 (4) |
C10 | 0.0311 (7) | 0.0169 (6) | 0.0169 (5) | −0.0034 (5) | 0.0034 (5) | 0.0021 (4) |
C11 | 0.0313 (7) | 0.0207 (6) | 0.0181 (5) | −0.0069 (5) | 0.0091 (5) | −0.0005 (5) |
C12 | 0.0244 (6) | 0.0194 (6) | 0.0201 (6) | −0.0012 (5) | 0.0094 (5) | −0.0002 (5) |
C13 | 0.0215 (6) | 0.0134 (5) | 0.0160 (5) | −0.0015 (4) | 0.0061 (4) | −0.0002 (4) |
C14 | 0.0170 (5) | 0.0134 (5) | 0.0170 (5) | 0.0017 (4) | 0.0063 (4) | 0.0006 (4) |
C15 | 0.0150 (5) | 0.0127 (5) | 0.0173 (5) | 0.0009 (4) | 0.0064 (4) | 0.0009 (4) |
C16 | 0.0144 (5) | 0.0154 (5) | 0.0166 (5) | 0.0001 (4) | 0.0039 (4) | −0.0002 (4) |
C17 | 0.0173 (5) | 0.0126 (5) | 0.0181 (5) | −0.0005 (4) | 0.0056 (4) | 0.0010 (4) |
C18 | 0.0145 (5) | 0.0162 (6) | 0.0155 (5) | 0.0014 (4) | 0.0053 (4) | 0.0013 (4) |
C19 | 0.0169 (5) | 0.0164 (6) | 0.0173 (5) | −0.0027 (4) | 0.0049 (4) | −0.0024 (4) |
C20 | 0.0171 (5) | 0.0124 (5) | 0.0202 (5) | −0.0012 (4) | 0.0077 (4) | −0.0003 (4) |
C21 | 0.0268 (7) | 0.0277 (7) | 0.0165 (5) | −0.0066 (6) | −0.0005 (5) | 0.0030 (5) |
O1—C16 | 1.3516 (14) | C8—C13 | 1.4038 (18) |
O1—H1O1 | 0.98 (2) | C9—C10 | 1.386 (2) |
O2—C18 | 1.3716 (14) | C9—H9A | 0.9500 |
O2—C21 | 1.4373 (15) | C10—C11 | 1.392 (2) |
N1—C7 | 1.3739 (15) | C10—H10A | 0.9500 |
N1—C1 | 1.3913 (16) | C11—C12 | 1.3880 (18) |
N1—C14 | 1.4793 (15) | C11—H11A | 0.9500 |
N2—C7 | 1.3217 (17) | C12—C13 | 1.4012 (18) |
N2—C6 | 1.3894 (17) | C12—H12A | 0.9500 |
N3—C13 | 1.3974 (16) | C14—C15 | 1.5060 (16) |
N3—C14 | 1.4626 (16) | C14—H14A | 1.0000 |
N3—H1N3 | 0.908 (18) | C15—C20 | 1.3863 (16) |
C1—C2 | 1.3967 (18) | C15—C16 | 1.4030 (17) |
C1—C6 | 1.4067 (18) | C16—C17 | 1.3964 (16) |
C2—C3 | 1.3859 (19) | C17—C18 | 1.3964 (17) |
C2—H2A | 0.9500 | C17—H17A | 0.9500 |
C3—C4 | 1.401 (2) | C18—C19 | 1.3934 (17) |
C3—H3A | 0.9500 | C19—C20 | 1.3909 (17) |
C4—C5 | 1.379 (2) | C19—H19A | 0.9500 |
C4—H4A | 0.9500 | C20—H20A | 0.9500 |
C5—C6 | 1.3967 (19) | C21—H21A | 0.9800 |
C5—H5A | 0.9500 | C21—H21B | 0.9800 |
C7—C8 | 1.4509 (18) | C21—H21C | 0.9800 |
C8—C9 | 1.3989 (17) | ||
C16—O1—H1O1 | 110.2 (13) | C12—C11—C10 | 120.74 (13) |
C18—O2—C21 | 116.28 (10) | C12—C11—H11A | 119.6 |
C7—N1—C1 | 106.83 (10) | C10—C11—H11A | 119.6 |
C7—N1—C14 | 121.61 (10) | C11—C12—C13 | 119.99 (13) |
C1—N1—C14 | 129.58 (10) | C11—C12—H12A | 120.0 |
C7—N2—C6 | 105.00 (10) | C13—C12—H12A | 120.0 |
C13—N3—C14 | 117.95 (10) | N3—C13—C12 | 121.37 (12) |
C13—N3—H1N3 | 113.2 (11) | N3—C13—C8 | 119.16 (11) |
C14—N3—H1N3 | 109.2 (11) | C12—C13—C8 | 119.36 (11) |
N1—C1—C2 | 133.57 (12) | N3—C14—N1 | 106.57 (10) |
N1—C1—C6 | 104.88 (11) | N3—C14—C15 | 109.75 (10) |
C2—C1—C6 | 121.49 (12) | N1—C14—C15 | 112.25 (9) |
C3—C2—C1 | 116.84 (12) | N3—C14—H14A | 109.4 |
C3—C2—H2A | 121.6 | N1—C14—H14A | 109.4 |
C1—C2—H2A | 121.6 | C15—C14—H14A | 109.4 |
C2—C3—C4 | 121.79 (13) | C20—C15—C16 | 118.87 (11) |
C2—C3—H3A | 119.1 | C20—C15—C14 | 120.27 (11) |
C4—C3—H3A | 119.1 | C16—C15—C14 | 120.85 (10) |
C5—C4—C3 | 121.50 (13) | O1—C16—C17 | 122.33 (11) |
C5—C4—H4A | 119.3 | O1—C16—C15 | 117.93 (11) |
C3—C4—H4A | 119.3 | C17—C16—C15 | 119.71 (11) |
C4—C5—C6 | 117.53 (13) | C16—C17—C18 | 119.96 (11) |
C4—C5—H5A | 121.2 | C16—C17—H17A | 120.0 |
C6—C5—H5A | 121.2 | C18—C17—H17A | 120.0 |
N2—C6—C5 | 128.86 (12) | O2—C18—C19 | 123.50 (11) |
N2—C6—C1 | 110.31 (11) | O2—C18—C17 | 115.52 (11) |
C5—C6—C1 | 120.83 (12) | C19—C18—C17 | 120.98 (11) |
N2—C7—N1 | 112.91 (11) | C20—C19—C18 | 117.94 (11) |
N2—C7—C8 | 127.69 (11) | C20—C19—H19A | 121.0 |
N1—C7—C8 | 119.39 (11) | C18—C19—H19A | 121.0 |
C9—C8—C13 | 119.79 (12) | C15—C20—C19 | 122.49 (11) |
C9—C8—C7 | 122.91 (12) | C15—C20—H20A | 118.8 |
C13—C8—C7 | 117.30 (11) | C19—C20—H20A | 118.8 |
C10—C9—C8 | 120.52 (13) | O2—C21—H21A | 109.5 |
C10—C9—H9A | 119.7 | O2—C21—H21B | 109.5 |
C8—C9—H9A | 119.7 | H21A—C21—H21B | 109.5 |
C9—C10—C11 | 119.58 (12) | O2—C21—H21C | 109.5 |
C9—C10—H10A | 120.2 | H21A—C21—H21C | 109.5 |
C11—C10—H10A | 120.2 | H21B—C21—H21C | 109.5 |
C7—N1—C1—C2 | −178.82 (14) | C14—N3—C13—C8 | 35.42 (16) |
C14—N1—C1—C2 | 17.3 (2) | C11—C12—C13—N3 | −177.47 (12) |
C7—N1—C1—C6 | −1.59 (13) | C11—C12—C13—C8 | −1.42 (19) |
C14—N1—C1—C6 | −165.47 (11) | C9—C8—C13—N3 | 176.42 (11) |
N1—C1—C2—C3 | 177.56 (13) | C7—C8—C13—N3 | −4.28 (17) |
C6—C1—C2—C3 | 0.70 (19) | C9—C8—C13—C12 | 0.28 (18) |
C1—C2—C3—C4 | 0.6 (2) | C7—C8—C13—C12 | 179.57 (11) |
C2—C3—C4—C5 | −1.3 (2) | C13—N3—C14—N1 | −49.22 (13) |
C3—C4—C5—C6 | 0.7 (2) | C13—N3—C14—C15 | −171.00 (10) |
C7—N2—C6—C5 | −179.60 (13) | C7—N1—C14—N3 | 37.49 (14) |
C7—N2—C6—C1 | 1.18 (14) | C1—N1—C14—N3 | −160.71 (11) |
C4—C5—C6—N2 | −178.49 (13) | C7—N1—C14—C15 | 157.67 (11) |
C4—C5—C6—C1 | 0.6 (2) | C1—N1—C14—C15 | −40.53 (16) |
N1—C1—C6—N2 | 0.28 (14) | N3—C14—C15—C20 | 42.18 (15) |
C2—C1—C6—N2 | 177.93 (11) | N1—C14—C15—C20 | −76.13 (14) |
N1—C1—C6—C5 | −179.00 (11) | N3—C14—C15—C16 | −138.89 (12) |
C2—C1—C6—C5 | −1.36 (19) | N1—C14—C15—C16 | 102.80 (13) |
C6—N2—C7—N1 | −2.29 (14) | C20—C15—C16—O1 | 179.23 (11) |
C6—N2—C7—C8 | 176.73 (12) | C14—C15—C16—O1 | 0.28 (17) |
C1—N1—C7—N2 | 2.53 (14) | C20—C15—C16—C17 | 1.05 (18) |
C14—N1—C7—N2 | 167.97 (10) | C14—C15—C16—C17 | −177.90 (11) |
C1—N1—C7—C8 | −176.58 (10) | O1—C16—C17—C18 | −177.68 (11) |
C14—N1—C7—C8 | −11.14 (17) | C15—C16—C17—C18 | 0.42 (18) |
N2—C7—C8—C9 | −7.4 (2) | C21—O2—C18—C19 | 8.93 (17) |
N1—C7—C8—C9 | 171.60 (11) | C21—O2—C18—C17 | −171.12 (11) |
N2—C7—C8—C13 | 173.36 (12) | C16—C17—C18—O2 | 178.11 (11) |
N1—C7—C8—C13 | −7.68 (17) | C16—C17—C18—C19 | −1.94 (18) |
C13—C8—C9—C10 | 1.00 (19) | O2—C18—C19—C20 | −178.13 (11) |
C7—C8—C9—C10 | −178.26 (12) | C17—C18—C19—C20 | 1.92 (18) |
C8—C9—C10—C11 | −1.12 (19) | C16—C15—C20—C19 | −1.06 (18) |
C9—C10—C11—C12 | 0.0 (2) | C14—C15—C20—C19 | 177.89 (11) |
C10—C11—C12—C13 | 1.3 (2) | C18—C19—C20—C15 | −0.41 (18) |
C14—N3—C13—C12 | −148.52 (12) |
Cg4 is the centroid of the C15–C20 ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H1N3···O2i | 0.907 (19) | 2.211 (19) | 3.0519 (15) | 153.8 (17) |
O1—H1O1···N2ii | 0.98 (2) | 1.72 (2) | 2.6816 (15) | 168 (2) |
C2—H2A···Cg4 | 0.95 | 2.85 | 3.6277 (16) | 140 |
Symmetry codes: (i) x, −y+1/2, z−1/2; (ii) −x, y−1/2, −z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C21H17N3O2 |
Mr | 343.38 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 100 |
a, b, c (Å) | 9.5408 (1), 15.6503 (2), 11.7609 (1) |
β (°) | 110.408 (1) |
V (Å3) | 1645.87 (3) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.09 |
Crystal size (mm) | 0.28 × 0.25 × 0.22 |
Data collection | |
Diffractometer | Bruker APEXII CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.974, 0.980 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 31713, 6610, 4637 |
Rint | 0.039 |
(sin θ/λ)max (Å−1) | 0.783 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.059, 0.139, 1.05 |
No. of reflections | 6610 |
No. of parameters | 244 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.43, −0.30 |
Computer programs: APEX2 (Bruker, 2005), SAINT (Bruker, 2005), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
Cg4 is the centroid of the C15–C20 ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H1N3···O2i | 0.907 (19) | 2.211 (19) | 3.0519 (15) | 153.8 (17) |
O1—H1O1···N2ii | 0.98 (2) | 1.72 (2) | 2.6816 (15) | 168 (2) |
C2—H2A···Cg4 | 0.95 | 2.85 | 3.6277 (16) | 140 |
Symmetry codes: (i) x, −y+1/2, z−1/2; (ii) −x, y−1/2, −z+1/2. |
Acknowledgements
The authors thank the Malaysian Government and Universiti Sains Malaysia for the RU research grant No. 1001/PKIMIA/815067. NEE thanks Universiti Sains Malaysia for a post-doctoral fellowship and the International University of Africa (Sudan) for providing study leave. The authors also thank the Universiti Sains Malaysia for the Research University grant No. 1001/PFIZIK/811160.
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Benzoheterocyclic derivatives have been used widely in the pharmaceutical industry and medicine due to their diverse pharmaceutical activities (Arienzo et al., 2007; Chassaing et al., 2008; Kumar et al., 2009; Kung et al., 2009; Podunavac-Kuzmanovic & Cvetkovic, 2010; Zhang et al., 2009) including inhibition against enteroviruses (Xue et al., 2011) and potent antitumor activity (Galarcei et al., 2008; Via et al., 2001). Due to their interesting activities, the benzimidazole and quinazoline scaffolds were selected for our ongoing structural studies (Eltayeb et al., 2007; 2009; 2011a; 2011b).
In the title compound (I) (Fig. 1), the benzimidazole ring system (C1–C7/N1–N2) is planar with the r.m.s. of 0.0086 (1) Å with the most deviation for atom C1 of 0.0183 (1) Å. The benzimidazole makes the dihedral angle of 8.29 (5)° with the C8–C13 benzene ring of the quinazoline moiety (C7–C14/N1/N3). The nitrogen six-membered ring adopts a half-chair conformation with the puckering parameter Q = 0.3941 (13) Å, θ = 59.34 (19)° and ϕ = 277.7 (2)° (Cremer & Pople, 1975). The orientation of the 5-methoxyphenol can be indicated by the dihedral angle between the phenol ring and benzimidazole of 81.79 (5)°. The methoxy substituted is slightly twisted from its attached benzene ring with the torsion angle C21–O2–C18–C19 = 8.93 (17)°. The bond lengths agree with the literature values (Allen et al., 1987).
In the crystal structure of (I) as shown Fig. 2, the molecules are linked through O—H···N hydrogen bonds (Table 1) into screw chains along the b axis. The adjacent screw chains are further connected by N—H···O hydrogen bonds (Table 1) forming the two-dimensional network parallel to the bc plane. The crystal is further stabilized by C—H···π weak interactions (Table 1). π···π interactions were also observed with centroid···centroid distances: Cg1···Cg3iii = 3.7184 (7) Å and Cg2···Cg2iv = 3.5258 (8) Å; Cg1, Cg2 and Cg3 are the centroids of C1/C6/C7/N1–N2, C1–C6 and C8–C13 rings, respectively (symmetry codes: (iii) = -x, 1-y, -z and (iv) = -x, 1-y 1-z). N···O[2.6816 (15) and 3.0519 (15) Å] short contacts were also observed.