organic compounds
Ethyl 5-methyl-1-(4-nitrophenyl)-1H-1,2,3-triazole-4-carboxylate
aX-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia, and bDepartment of Studies in Chemistry, Mangalore University, Mangalagangotri, Mangalore 574 199, India
*Correspondence e-mail: hkfun@usm.my
In the title compound, C12H12N4O4, the 1,2,3-triazole ring and the nitro group form dihedral angles of 37.93 (5) and 8.97 (12)°, respectively, with the phenyl ring. The molecular structure is stabilized by an intramolecular C—H⋯O hydrogen bond, which generates an S(6) ring motif. In the crystal, molecules are linked by C—H⋯N hydrogen bonds into layers lying parallel to (100). The is further consolidated by π–π [centroid–centroid distance = 3.6059 (6) Å] interactions.
Related literature
For general background to and the biological activity of 1,2,3-triazole derivatives, see: Sherement et al. (2004); Danoun et al. (1998); Manfredini et al. (2000); Biagi et al. (2004). For standard bond-length data, see: Allen et al. (1987). For hydrogen-bond motifs, see: Bernstein et al. (1995). For the stability of the temperature controller used for the data collection, see: Cosier & Glazer (1986). For related structures, see: Fun, Quah, Chandrakantha et al. (2011); Fun, Quah, Nithinchandra et al. (2011).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2009); cell SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).
Supporting information
10.1107/S1600536811033940/hb6375sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811033940/hb6375Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536811033940/hb6375Isup3.cml
1-Azido-4-nitrobenzene (15 g) was treated with ethyl acetoacetate (8.3 g) in methanol (75 ml) and the mixture was cooled to 273 K. Sodium methoxide (3.5 g) was added under inert atmosphere to the above mixture and stirred at ambient temperature for 8 h. Progress of the reaction was monitored by TLC (ethyl acetate/n-hexane, 2:3, v/v). After completion of the reaction, the mixture was poured on to ice cold water. The precipitated solid was filtered, washed with water and recrystallized from methanol. Colourless plates of (I) were obtained from DMF by slow evaporation.
All H atoms were positioned geometrically and refined using a riding model with C–H = 0.95-0.99 Å and Uiso(H) = 1.2 or 1.5 Ueq(C). A rotating-group model was applied for the methyl groups.
Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).C12H12N4O4 | F(000) = 576 |
Mr = 276.26 | Dx = 1.494 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 8459 reflections |
a = 13.5309 (3) Å | θ = 3.1–32.6° |
b = 7.3014 (2) Å | µ = 0.12 mm−1 |
c = 12.6058 (3) Å | T = 100 K |
β = 99.574 (1)° | Plate, colourless |
V = 1228.04 (5) Å3 | 0.50 × 0.16 × 0.16 mm |
Z = 4 |
Bruker SMART APEXII CCD diffractometer | 4469 independent reflections |
Radiation source: fine-focus sealed tube | 3699 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.021 |
ϕ and ω scans | θmax = 32.6°, θmin = 3.1° |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | h = −20→18 |
Tmin = 0.944, Tmax = 0.982 | k = −11→8 |
16800 measured reflections | l = −19→19 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.040 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.114 | H-atom parameters constrained |
S = 1.03 | w = 1/[σ2(Fo2) + (0.0579P)2 + 0.3698P] where P = (Fo2 + 2Fc2)/3 |
4469 reflections | (Δ/σ)max = 0.001 |
183 parameters | Δρmax = 0.41 e Å−3 |
0 restraints | Δρmin = −0.30 e Å−3 |
C12H12N4O4 | V = 1228.04 (5) Å3 |
Mr = 276.26 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 13.5309 (3) Å | µ = 0.12 mm−1 |
b = 7.3014 (2) Å | T = 100 K |
c = 12.6058 (3) Å | 0.50 × 0.16 × 0.16 mm |
β = 99.574 (1)° |
Bruker SMART APEXII CCD diffractometer | 4469 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | 3699 reflections with I > 2σ(I) |
Tmin = 0.944, Tmax = 0.982 | Rint = 0.021 |
16800 measured reflections |
R[F2 > 2σ(F2)] = 0.040 | 0 restraints |
wR(F2) = 0.114 | H-atom parameters constrained |
S = 1.03 | Δρmax = 0.41 e Å−3 |
4469 reflections | Δρmin = −0.30 e Å−3 |
183 parameters |
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.17538 (5) | 0.16665 (10) | −0.05384 (5) | 0.01804 (15) | |
O2 | 0.81492 (6) | 0.19872 (12) | 0.56912 (6) | 0.02603 (18) | |
O3 | 0.88912 (6) | 0.04601 (13) | 0.45702 (7) | 0.02874 (19) | |
O4 | 0.14766 (5) | 0.02184 (11) | 0.09686 (6) | 0.02182 (16) | |
N1 | 0.45814 (6) | 0.12739 (11) | 0.18124 (6) | 0.01308 (15) | |
N2 | 0.46803 (6) | 0.17529 (12) | 0.07841 (6) | 0.01609 (16) | |
N3 | 0.37872 (6) | 0.17308 (12) | 0.02083 (6) | 0.01568 (16) | |
N4 | 0.81564 (6) | 0.12105 (13) | 0.48264 (7) | 0.01954 (17) | |
C1 | 0.63468 (7) | 0.05446 (13) | 0.22772 (7) | 0.01570 (17) | |
H1A | 0.6336 | 0.0113 | 0.1564 | 0.019* | |
C2 | 0.72344 (7) | 0.05470 (13) | 0.30098 (7) | 0.01654 (17) | |
H2A | 0.7841 | 0.0126 | 0.2807 | 0.020* | |
C3 | 0.72162 (7) | 0.11789 (13) | 0.40463 (7) | 0.01516 (17) | |
C4 | 0.63467 (7) | 0.17883 (13) | 0.43757 (7) | 0.01519 (17) | |
H4A | 0.6358 | 0.2197 | 0.5093 | 0.018* | |
C5 | 0.54574 (7) | 0.17947 (13) | 0.36424 (7) | 0.01414 (16) | |
H5A | 0.4852 | 0.2209 | 0.3850 | 0.017* | |
C6 | 0.54695 (6) | 0.11829 (13) | 0.25977 (7) | 0.01296 (16) | |
C7 | 0.36061 (6) | 0.09299 (12) | 0.18864 (7) | 0.01266 (16) | |
C8 | 0.31097 (7) | 0.12254 (13) | 0.08482 (7) | 0.01365 (16) | |
C9 | 0.20306 (7) | 0.09756 (13) | 0.04465 (7) | 0.01549 (17) | |
C10 | 0.32346 (7) | 0.03491 (14) | 0.28808 (7) | 0.01660 (18) | |
H10A | 0.3749 | −0.0389 | 0.3327 | 0.025* | |
H10B | 0.2624 | −0.0381 | 0.2686 | 0.025* | |
H10C | 0.3087 | 0.1434 | 0.3284 | 0.025* | |
C11 | 0.06813 (7) | 0.14784 (16) | −0.09678 (8) | 0.0212 (2) | |
H11A | 0.0276 | 0.1941 | −0.0440 | 0.025* | |
H11B | 0.0510 | 0.0175 | −0.1116 | 0.025* | |
C12 | 0.04675 (8) | 0.25753 (17) | −0.19890 (8) | 0.0252 (2) | |
H12A | −0.0243 | 0.2459 | −0.2301 | 0.038* | |
H12B | 0.0879 | 0.2116 | −0.2502 | 0.038* | |
H12C | 0.0627 | 0.3866 | −0.1830 | 0.038* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0132 (3) | 0.0239 (4) | 0.0165 (3) | −0.0003 (3) | 0.0008 (2) | 0.0035 (3) |
O2 | 0.0228 (4) | 0.0363 (5) | 0.0175 (3) | −0.0044 (3) | −0.0011 (3) | 0.0009 (3) |
O3 | 0.0157 (3) | 0.0370 (5) | 0.0330 (4) | 0.0053 (3) | 0.0024 (3) | 0.0051 (4) |
O4 | 0.0167 (3) | 0.0304 (4) | 0.0189 (3) | −0.0049 (3) | 0.0043 (2) | 0.0031 (3) |
N1 | 0.0132 (3) | 0.0159 (4) | 0.0106 (3) | −0.0003 (3) | 0.0035 (2) | 0.0001 (3) |
N2 | 0.0153 (3) | 0.0219 (4) | 0.0116 (3) | −0.0003 (3) | 0.0039 (3) | 0.0019 (3) |
N3 | 0.0146 (3) | 0.0198 (4) | 0.0130 (3) | −0.0003 (3) | 0.0036 (3) | 0.0011 (3) |
N4 | 0.0155 (4) | 0.0227 (4) | 0.0197 (4) | −0.0016 (3) | 0.0009 (3) | 0.0060 (3) |
C1 | 0.0166 (4) | 0.0165 (4) | 0.0150 (4) | 0.0002 (3) | 0.0056 (3) | −0.0009 (3) |
C2 | 0.0143 (4) | 0.0169 (4) | 0.0194 (4) | 0.0013 (3) | 0.0057 (3) | 0.0007 (3) |
C3 | 0.0136 (4) | 0.0156 (4) | 0.0159 (4) | −0.0009 (3) | 0.0013 (3) | 0.0030 (3) |
C4 | 0.0159 (4) | 0.0164 (4) | 0.0133 (3) | −0.0003 (3) | 0.0027 (3) | 0.0012 (3) |
C5 | 0.0141 (4) | 0.0158 (4) | 0.0130 (3) | 0.0006 (3) | 0.0037 (3) | 0.0001 (3) |
C6 | 0.0130 (4) | 0.0132 (4) | 0.0128 (3) | −0.0004 (3) | 0.0028 (3) | 0.0008 (3) |
C7 | 0.0136 (4) | 0.0121 (4) | 0.0129 (3) | −0.0009 (3) | 0.0041 (3) | −0.0005 (3) |
C8 | 0.0141 (4) | 0.0152 (4) | 0.0124 (3) | −0.0004 (3) | 0.0042 (3) | −0.0003 (3) |
C9 | 0.0149 (4) | 0.0175 (4) | 0.0142 (4) | 0.0006 (3) | 0.0027 (3) | −0.0014 (3) |
C10 | 0.0176 (4) | 0.0198 (4) | 0.0134 (4) | −0.0026 (3) | 0.0057 (3) | 0.0010 (3) |
C11 | 0.0130 (4) | 0.0282 (5) | 0.0213 (4) | −0.0002 (4) | −0.0007 (3) | 0.0024 (4) |
C12 | 0.0207 (5) | 0.0312 (6) | 0.0220 (4) | 0.0025 (4) | −0.0015 (4) | 0.0047 (4) |
O1—C9 | 1.3348 (11) | C4—C5 | 1.3901 (12) |
O1—C11 | 1.4685 (11) | C4—H4A | 0.9500 |
O2—N4 | 1.2303 (12) | C5—C6 | 1.3933 (12) |
O3—N4 | 1.2246 (12) | C5—H5A | 0.9500 |
O4—C9 | 1.2103 (12) | C7—C8 | 1.3849 (12) |
N1—C7 | 1.3616 (11) | C7—C10 | 1.4878 (12) |
N1—N2 | 1.3705 (10) | C8—C9 | 1.4751 (13) |
N1—C6 | 1.4258 (11) | C10—H10A | 0.9800 |
N2—N3 | 1.3022 (11) | C10—H10B | 0.9800 |
N3—C8 | 1.3686 (11) | C10—H10C | 0.9800 |
N4—C3 | 1.4730 (12) | C11—C12 | 1.5029 (14) |
C1—C2 | 1.3879 (13) | C11—H11A | 0.9900 |
C1—C6 | 1.3962 (13) | C11—H11B | 0.9900 |
C1—H1A | 0.9500 | C12—H12A | 0.9800 |
C2—C3 | 1.3897 (13) | C12—H12B | 0.9800 |
C2—H2A | 0.9500 | C12—H12C | 0.9800 |
C3—C4 | 1.3846 (13) | ||
C9—O1—C11 | 114.50 (8) | N1—C7—C8 | 103.28 (7) |
C7—N1—N2 | 111.11 (7) | N1—C7—C10 | 125.27 (8) |
C7—N1—C6 | 131.17 (7) | C8—C7—C10 | 131.44 (8) |
N2—N1—C6 | 117.71 (7) | N3—C8—C7 | 109.38 (8) |
N3—N2—N1 | 107.24 (7) | N3—C8—C9 | 123.56 (8) |
N2—N3—C8 | 108.98 (7) | C7—C8—C9 | 127.01 (8) |
O3—N4—O2 | 124.49 (9) | O4—C9—O1 | 125.10 (9) |
O3—N4—C3 | 117.77 (9) | O4—C9—C8 | 122.48 (8) |
O2—N4—C3 | 117.74 (8) | O1—C9—C8 | 112.41 (8) |
C2—C1—C6 | 119.36 (8) | C7—C10—H10A | 109.5 |
C2—C1—H1A | 120.3 | C7—C10—H10B | 109.5 |
C6—C1—H1A | 120.3 | H10A—C10—H10B | 109.5 |
C1—C2—C3 | 118.52 (8) | C7—C10—H10C | 109.5 |
C1—C2—H2A | 120.7 | H10A—C10—H10C | 109.5 |
C3—C2—H2A | 120.7 | H10B—C10—H10C | 109.5 |
C4—C3—C2 | 122.51 (8) | O1—C11—C12 | 107.67 (8) |
C4—C3—N4 | 118.52 (8) | O1—C11—H11A | 110.2 |
C2—C3—N4 | 118.97 (8) | C12—C11—H11A | 110.2 |
C3—C4—C5 | 119.11 (8) | O1—C11—H11B | 110.2 |
C3—C4—H4A | 120.4 | C12—C11—H11B | 110.2 |
C5—C4—H4A | 120.4 | H11A—C11—H11B | 108.5 |
C4—C5—C6 | 118.85 (8) | C11—C12—H12A | 109.5 |
C4—C5—H5A | 120.6 | C11—C12—H12B | 109.5 |
C6—C5—H5A | 120.6 | H12A—C12—H12B | 109.5 |
C5—C6—C1 | 121.66 (8) | C11—C12—H12C | 109.5 |
C5—C6—N1 | 120.02 (8) | H12A—C12—H12C | 109.5 |
C1—C6—N1 | 118.27 (8) | H12B—C12—H12C | 109.5 |
C7—N1—N2—N3 | 0.42 (10) | C7—N1—C6—C1 | 142.62 (10) |
C6—N1—N2—N3 | 179.36 (8) | N2—N1—C6—C1 | −36.07 (12) |
N1—N2—N3—C8 | −0.58 (10) | N2—N1—C7—C8 | −0.07 (10) |
C6—C1—C2—C3 | 0.41 (14) | C6—N1—C7—C8 | −178.83 (9) |
C1—C2—C3—C4 | 0.58 (14) | N2—N1—C7—C10 | 179.02 (9) |
C1—C2—C3—N4 | −179.20 (8) | C6—N1—C7—C10 | 0.27 (15) |
O3—N4—C3—C4 | 171.06 (9) | N2—N3—C8—C7 | 0.56 (11) |
O2—N4—C3—C4 | −8.86 (13) | N2—N3—C8—C9 | −177.07 (9) |
O3—N4—C3—C2 | −9.16 (13) | N1—C7—C8—N3 | −0.28 (10) |
O2—N4—C3—C2 | 170.93 (9) | C10—C7—C8—N3 | −179.30 (9) |
C2—C3—C4—C5 | −0.85 (14) | N1—C7—C8—C9 | 177.24 (9) |
N4—C3—C4—C5 | 178.93 (8) | C10—C7—C8—C9 | −1.78 (17) |
C3—C4—C5—C6 | 0.12 (14) | C11—O1—C9—O4 | 1.16 (14) |
C4—C5—C6—C1 | 0.87 (14) | C11—O1—C9—C8 | −179.05 (8) |
C4—C5—C6—N1 | −176.36 (8) | N3—C8—C9—O4 | 166.28 (9) |
C2—C1—C6—C5 | −1.14 (14) | C7—C8—C9—O4 | −10.92 (16) |
C2—C1—C6—N1 | 176.14 (8) | N3—C8—C9—O1 | −13.51 (13) |
C7—N1—C6—C5 | −40.05 (14) | C7—C8—C9—O1 | 169.29 (9) |
N2—N1—C6—C5 | 141.26 (9) | C9—O1—C11—C12 | 171.11 (9) |
D—H···A | D—H | H···A | D···A | D—H···A |
C1—H1A···N3i | 0.95 | 2.59 | 3.5243 (12) | 168 |
C5—H5A···N2ii | 0.95 | 2.60 | 3.2347 (12) | 125 |
C5—H5A···N3ii | 0.95 | 2.54 | 3.4127 (12) | 154 |
C10—H10B···O4 | 0.98 | 2.48 | 3.0936 (12) | 120 |
Symmetry codes: (i) −x+1, −y, −z; (ii) x, −y+1/2, z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C12H12N4O4 |
Mr | 276.26 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 100 |
a, b, c (Å) | 13.5309 (3), 7.3014 (2), 12.6058 (3) |
β (°) | 99.574 (1) |
V (Å3) | 1228.04 (5) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.12 |
Crystal size (mm) | 0.50 × 0.16 × 0.16 |
Data collection | |
Diffractometer | Bruker SMART APEXII CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2009) |
Tmin, Tmax | 0.944, 0.982 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 16800, 4469, 3699 |
Rint | 0.021 |
(sin θ/λ)max (Å−1) | 0.759 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.040, 0.114, 1.03 |
No. of reflections | 4469 |
No. of parameters | 183 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.41, −0.30 |
Computer programs: APEX2 (Bruker, 2009), SAINT (Bruker, 2009), SHELXTL (Sheldrick, 2008), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
C1—H1A···N3i | 0.95 | 2.59 | 3.5243 (12) | 168 |
C5—H5A···N2ii | 0.95 | 2.60 | 3.2347 (12) | 125 |
C5—H5A···N3ii | 0.95 | 2.54 | 3.4127 (12) | 154 |
C10—H10B···O4 | 0.98 | 2.48 | 3.0936 (12) | 120 |
Symmetry codes: (i) −x+1, −y, −z; (ii) x, −y+1/2, z+1/2. |
Acknowledgements
HKF and CKQ thank Universiti Sains Malaysia for the Research University Grant (No. 1001/PFIZIK/811160).
References
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1,2,3-Triazole and its derivatives had attracted considerable attention for the past few decades due to their chemotherapeutical value. Many 1,2,3-triazoles are found to be potent antimicrobial (Sherement et al., 2004) and antiviral agents. Some of them have exhibited antiproliferative and anticancer activities (Danoun et al., 1998). Some 1,2,3-triazoles are used as DNA cleaving agents (Manfredini et al., 2000) and potassium channel activators (Biagi et al., 2004). Prompted by the chemotherapeutic importance of 1,2,3-triazoles and its derivatives, we synthesized the title compound.
In the title molecule, Fig. 1, the 1,2,3-triazole ring (N1-N3/C7/C8, maximum deviation of 0.003 (1) Å at atoms N2 and N3) and the nitro group (O2/O3/N4) form dihedral angles of 37.93 (5) and 8.97 (12)°, respectively, with the phenyl ring (C1-C6). Bond lengths (Allen et al., 1987) and angles are within normal ranges and are comparable to related structures (Fun, Quah, Chandrakantha et al., 2011; Fun, Quah, Nithinchandra et al., 2011). The molecular structure is stabilized by an intramolecular C41-H10B···O4 hydrogen bond (Table 1), which generates an S(6) ring motif (Fig. 1, Bernstein et al., 1995).
In the crystal structure, Fig. 2, molecules are linked via intermolecular C1–H1A···N3, C5–H5A···N2 and C5–H5A···N3 hydrogen bonds (Table 1) into two-dimensional planes parallel to (100). π-π stacking interactions between the centroids of C1-C6 phenyl ring (Cg1) and N1-N3/C7/C8 triazole ring (Cg2), with Cg1···Cg2iii distance of 3.6059 (6) Å [symmetry code: (iii) 1-X,-1/2+Y,1/2-Z] are observed.