organic compounds
Ethyl 5-((1E)-1-{(E)-2-[1-(4-ethoxycarbonyl-3-methyl-1,2-oxazol-5-yl)ethylidene]hydrazin-1-ylidene}ethyl)-3-methyl-1,2-oxazole-4-carboxylate
aChemistry Department, Faculty of Science, King Abdulaziz University, PO Box 80203, Jeddah, Saudi Arabia, bThe Center of Excellence for Advanced Materials Research, King Abdulaziz University, Jeddah, PO Box 80203, Saudi Arabia, and cDepartment of Chemistry, University of Malaya, 50603 Kuala Lumpur, Malaysia
*Correspondence e-mail: edward.tiekink@gmail.com
The complete molecule of the title compound, C18H22N4O6, is generated by the application of a twofold axis of symmetry. Twists are evident in the molecule, i.e. between each —C=N—N group and the adjacent oxazole ring [dihedral angle = 46.08 (12) °] and between the latter and attached ester group [excluding the terminal methyl group; dihedral angle = 24.4 (7) °]. In the crystal, C—H⋯O and π–π [3.5990 (11) Å] contacts connect molecules into supramolecular arrays in the ac plane. These stack along the b axis, being connected by weak π–π [3.3903 (11) Å] interactions.
Related literature
For background to the biological activity of hydrazone compounds, see: Faid-Allah et al. (2011).
Experimental
Crystal data
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Refinement
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Data collection: CrysAlis PRO (Agilent, 2010); cell CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 2006); software used to prepare material for publication: publCIF (Westrip, 2010).
Supporting information
10.1107/S1600536811032004/hg5078sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811032004/hg5078Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536811032004/hg5078Isup3.cml
Ethyl 5-acetyl-2-methylthiazole-4-carboxylate (10 mmol) in C2H5OH (25 ml) was refluxed with hydrazine hydrate (12 mmol) for 1 h. The hydrazone which separated after concentration of the reaction mixture was filtered off, washed with C2H5OH, and recrystallized from C2H5OH; M.pt. 448 K.
Carbon-bound H-atoms were placed in calculated positions [C—H 0.98 to 0.99 Å, Uiso(H) 1.2 to 1.5Ueq(C)] and were included in the
in the riding model approximation.Data collection: CrysAlis PRO (Agilent, 2010); cell
CrysAlis PRO (Agilent, 2010); data reduction: CrysAlis PRO (Agilent, 2010); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 2006); software used to prepare material for publication: publCIF (Westrip, 2010).C18H22N4O6 | F(000) = 412 |
Mr = 390.40 | Dx = 1.381 Mg m−3 |
Monoclinic, P2/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yac | Cell parameters from 1742 reflections |
a = 9.4509 (5) Å | θ = 2.4–29.3° |
b = 8.5456 (4) Å | µ = 0.11 mm−1 |
c = 11.9859 (5) Å | T = 100 K |
β = 104.107 (5)° | Plate, colourless |
V = 938.83 (8) Å3 | 0.25 × 0.25 × 0.05 mm |
Z = 2 |
Agilent SuperNova Dual diffractometer with Atlas detector | 2095 independent reflections |
Radiation source: SuperNova (Mo) X-ray Source | 1639 reflections with I > 2σ(I) |
Mirror monochromator | Rint = 0.023 |
Detector resolution: 10.4041 pixels mm-1 | θmax = 27.5°, θmin = 2.4° |
ω scans | h = −11→11 |
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2010) | k = −11→10 |
Tmin = 0.889, Tmax = 1.000 | l = −14→15 |
4223 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.049 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.159 | H-atom parameters constrained |
S = 0.87 | w = 1/[σ2(Fo2) + (0.0921P)2 + 1.4075P] where P = (Fo2 + 2Fc2)/3 |
2095 reflections | (Δ/σ)max < 0.001 |
129 parameters | Δρmax = 0.37 e Å−3 |
0 restraints | Δρmin = −0.32 e Å−3 |
C18H22N4O6 | V = 938.83 (8) Å3 |
Mr = 390.40 | Z = 2 |
Monoclinic, P2/n | Mo Kα radiation |
a = 9.4509 (5) Å | µ = 0.11 mm−1 |
b = 8.5456 (4) Å | T = 100 K |
c = 11.9859 (5) Å | 0.25 × 0.25 × 0.05 mm |
β = 104.107 (5)° |
Agilent SuperNova Dual diffractometer with Atlas detector | 2095 independent reflections |
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2010) | 1639 reflections with I > 2σ(I) |
Tmin = 0.889, Tmax = 1.000 | Rint = 0.023 |
4223 measured reflections |
R[F2 > 2σ(F2)] = 0.049 | 0 restraints |
wR(F2) = 0.159 | H-atom parameters constrained |
S = 0.87 | Δρmax = 0.37 e Å−3 |
2095 reflections | Δρmin = −0.32 e Å−3 |
129 parameters |
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.54005 (15) | 0.52943 (17) | 0.63908 (12) | 0.0176 (3) | |
O2 | 0.67094 (17) | 0.02949 (18) | 0.57529 (14) | 0.0248 (4) | |
O3 | 0.51960 (17) | 0.05289 (17) | 0.69403 (12) | 0.0202 (4) | |
N1 | 0.67630 (19) | 0.5276 (2) | 0.60982 (14) | 0.0186 (4) | |
N2 | 0.32058 (18) | 0.45172 (19) | 0.74369 (14) | 0.0162 (4) | |
C1 | 0.4715 (3) | −0.1526 (3) | 0.8137 (2) | 0.0309 (6) | |
H1A | 0.4662 | −0.2662 | 0.8231 | 0.046* | |
H1B | 0.3756 | −0.1062 | 0.8101 | 0.046* | |
H1C | 0.5434 | −0.1085 | 0.8792 | 0.046* | |
C2 | 0.5158 (3) | −0.1174 (3) | 0.7054 (2) | 0.0271 (5) | |
H2A | 0.6133 | −0.1623 | 0.7086 | 0.033* | |
H2B | 0.4450 | −0.1632 | 0.6387 | 0.033* | |
C3 | 0.5997 (2) | 0.1086 (3) | 0.62488 (16) | 0.0172 (4) | |
C4 | 0.8420 (2) | 0.3360 (3) | 0.56290 (18) | 0.0226 (5) | |
H4A | 0.8956 | 0.4309 | 0.5526 | 0.034* | |
H4B | 0.8161 | 0.2777 | 0.4904 | 0.034* | |
H4C | 0.9033 | 0.2705 | 0.6227 | 0.034* | |
C5 | 0.7064 (2) | 0.3801 (2) | 0.59804 (16) | 0.0161 (4) | |
C6 | 0.5953 (2) | 0.2805 (2) | 0.62067 (15) | 0.0150 (4) | |
C7 | 0.4951 (2) | 0.3805 (2) | 0.64479 (16) | 0.0148 (4) | |
C8 | 0.3485 (2) | 0.3616 (2) | 0.66646 (16) | 0.0153 (4) | |
C9 | 0.2435 (2) | 0.2483 (3) | 0.59511 (18) | 0.0201 (5) | |
H9A | 0.1556 | 0.3042 | 0.5542 | 0.030* | |
H9B | 0.2170 | 0.1685 | 0.6451 | 0.030* | |
H9C | 0.2892 | 0.1980 | 0.5393 | 0.030* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0160 (7) | 0.0156 (8) | 0.0229 (7) | −0.0016 (5) | 0.0082 (6) | 0.0009 (6) |
O2 | 0.0251 (9) | 0.0214 (8) | 0.0312 (8) | 0.0041 (6) | 0.0134 (7) | −0.0046 (6) |
O3 | 0.0276 (8) | 0.0123 (7) | 0.0238 (8) | 0.0014 (6) | 0.0124 (6) | 0.0017 (6) |
N1 | 0.0141 (8) | 0.0240 (10) | 0.0194 (8) | −0.0022 (7) | 0.0074 (7) | 0.0010 (7) |
N2 | 0.0142 (9) | 0.0152 (9) | 0.0200 (8) | 0.0015 (6) | 0.0059 (7) | 0.0020 (7) |
C1 | 0.0438 (15) | 0.0198 (12) | 0.0295 (12) | −0.0039 (10) | 0.0099 (11) | 0.0041 (9) |
C2 | 0.0397 (14) | 0.0120 (11) | 0.0323 (12) | 0.0001 (9) | 0.0138 (10) | 0.0017 (9) |
C3 | 0.0146 (10) | 0.0192 (11) | 0.0168 (9) | 0.0006 (8) | 0.0017 (8) | −0.0006 (8) |
C4 | 0.0159 (10) | 0.0304 (12) | 0.0235 (10) | 0.0016 (9) | 0.0086 (8) | 0.0012 (9) |
C5 | 0.0153 (9) | 0.0201 (10) | 0.0126 (9) | 0.0000 (8) | 0.0026 (7) | 0.0014 (7) |
C6 | 0.0133 (9) | 0.0182 (10) | 0.0138 (9) | 0.0004 (7) | 0.0037 (7) | 0.0010 (7) |
C7 | 0.0162 (10) | 0.0143 (10) | 0.0138 (9) | −0.0010 (8) | 0.0034 (7) | 0.0014 (7) |
C8 | 0.0155 (10) | 0.0129 (9) | 0.0181 (9) | −0.0004 (7) | 0.0049 (7) | 0.0030 (7) |
C9 | 0.0166 (10) | 0.0226 (11) | 0.0220 (10) | −0.0030 (8) | 0.0065 (8) | −0.0034 (8) |
O1—C7 | 1.349 (2) | C2—H2B | 0.9900 |
O1—N1 | 1.415 (2) | C3—C6 | 1.470 (3) |
O2—C3 | 1.207 (2) | C4—C5 | 1.492 (3) |
O3—C3 | 1.339 (2) | C4—H4A | 0.9800 |
O3—C2 | 1.462 (3) | C4—H4B | 0.9800 |
N1—C5 | 1.307 (3) | C4—H4C | 0.9800 |
N2—C8 | 1.280 (3) | C5—C6 | 1.428 (3) |
N2—N2i | 1.379 (3) | C6—C7 | 1.358 (3) |
C1—C2 | 1.489 (3) | C7—C8 | 1.479 (3) |
C1—H1A | 0.9800 | C8—C9 | 1.496 (3) |
C1—H1B | 0.9800 | C9—H9A | 0.9800 |
C1—H1C | 0.9800 | C9—H9B | 0.9800 |
C2—H2A | 0.9900 | C9—H9C | 0.9800 |
C7—O1—N1 | 108.63 (14) | C5—C4—H4C | 109.5 |
C3—O3—C2 | 116.20 (16) | H4A—C4—H4C | 109.5 |
C5—N1—O1 | 105.79 (16) | H4B—C4—H4C | 109.5 |
C8—N2—N2i | 117.04 (17) | N1—C5—C6 | 111.43 (18) |
C2—C1—H1A | 109.5 | N1—C5—C4 | 119.89 (19) |
C2—C1—H1B | 109.5 | C6—C5—C4 | 128.67 (19) |
H1A—C1—H1B | 109.5 | C7—C6—C5 | 104.37 (18) |
C2—C1—H1C | 109.5 | C7—C6—C3 | 129.58 (18) |
H1A—C1—H1C | 109.5 | C5—C6—C3 | 125.88 (18) |
H1B—C1—H1C | 109.5 | O1—C7—C6 | 109.77 (17) |
O3—C2—C1 | 107.50 (18) | O1—C7—C8 | 115.58 (17) |
O3—C2—H2A | 110.2 | C6—C7—C8 | 134.47 (19) |
C1—C2—H2A | 110.2 | N2—C8—C7 | 115.36 (17) |
O3—C2—H2B | 110.2 | N2—C8—C9 | 125.31 (18) |
C1—C2—H2B | 110.2 | C7—C8—C9 | 119.26 (17) |
H2A—C2—H2B | 108.5 | C8—C9—H9A | 109.5 |
O2—C3—O3 | 125.0 (2) | C8—C9—H9B | 109.5 |
O2—C3—C6 | 123.86 (19) | H9A—C9—H9B | 109.5 |
O3—C3—C6 | 111.13 (17) | C8—C9—H9C | 109.5 |
C5—C4—H4A | 109.5 | H9A—C9—H9C | 109.5 |
C5—C4—H4B | 109.5 | H9B—C9—H9C | 109.5 |
H4A—C4—H4B | 109.5 | ||
C7—O1—N1—C5 | 0.7 (2) | O3—C3—C6—C5 | 152.60 (18) |
C3—O3—C2—C1 | 159.33 (19) | N1—O1—C7—C6 | 0.0 (2) |
C2—O3—C3—O2 | −2.3 (3) | N1—O1—C7—C8 | −175.79 (15) |
C2—O3—C3—C6 | −179.88 (17) | C5—C6—C7—O1 | −0.6 (2) |
O1—N1—C5—C6 | −1.1 (2) | C3—C6—C7—O1 | 174.79 (18) |
O1—N1—C5—C4 | 177.90 (16) | C5—C6—C7—C8 | 174.0 (2) |
N1—C5—C6—C7 | 1.1 (2) | C3—C6—C7—C8 | −10.5 (4) |
C4—C5—C6—C7 | −177.79 (19) | N2i—N2—C8—C7 | 172.11 (15) |
N1—C5—C6—C3 | −174.53 (18) | N2i—N2—C8—C9 | −4.7 (3) |
C4—C5—C6—C3 | 6.6 (3) | O1—C7—C8—N2 | −43.3 (2) |
O2—C3—C6—C7 | 160.5 (2) | C6—C7—C8—N2 | 142.2 (2) |
O3—C3—C6—C7 | −21.9 (3) | O1—C7—C8—C9 | 133.71 (19) |
O2—C3—C6—C5 | −25.0 (3) | C6—C7—C8—C9 | −40.7 (3) |
Symmetry code: (i) −x+1/2, y, −z+3/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
C9—H9c···O2ii | 0.98 | 2.46 | 3.356 (3) | 152 |
Symmetry code: (ii) −x+1, −y, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C18H22N4O6 |
Mr | 390.40 |
Crystal system, space group | Monoclinic, P2/n |
Temperature (K) | 100 |
a, b, c (Å) | 9.4509 (5), 8.5456 (4), 11.9859 (5) |
β (°) | 104.107 (5) |
V (Å3) | 938.83 (8) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.11 |
Crystal size (mm) | 0.25 × 0.25 × 0.05 |
Data collection | |
Diffractometer | Agilent SuperNova Dual diffractometer with Atlas detector |
Absorption correction | Multi-scan (CrysAlis PRO; Agilent, 2010) |
Tmin, Tmax | 0.889, 1.000 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 4223, 2095, 1639 |
Rint | 0.023 |
(sin θ/λ)max (Å−1) | 0.649 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.049, 0.159, 0.87 |
No. of reflections | 2095 |
No. of parameters | 129 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.37, −0.32 |
Computer programs: CrysAlis PRO (Agilent, 2010), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 2006), publCIF (Westrip, 2010).
D—H···A | D—H | H···A | D···A | D—H···A |
C9—H9c···O2i | 0.98 | 2.46 | 3.356 (3) | 152 |
Symmetry code: (i) −x+1, −y, −z+1. |
Footnotes
‡Additional correspondence author, e-mail: aasiri2@kau.edu.sa.
Acknowledgements
The authors thank King Abdulaziz University and the University of Malaya for supporting this study.
References
Agilent (2010). CrysAlis PRO. Agilent Technologies, Yarnton, England. Google Scholar
Brandenburg, K. (2006). DIAMOND. Crystal Impact GbR, Bonn, Germany. Google Scholar
Faid-Allah, H. M., Khan, K. A. & Makki, M. S. I. (2011). J. Chin. Chem. Soc. 58, 191–198. CAS Google Scholar
Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565. CrossRef IUCr Journals Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Westrip, S. P. (2010). J. Appl. Cryst. 43, 920–925. Web of Science CrossRef CAS IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The study of the title compound (I) was motivated by the recent report of the significant anti-bacterial and anti-fungal activity exhibited hydrazone compounds (Faid-Allah et al., 2011).
The full molecule of (I) is generated by the application of a 2-fold axis of symmetry. The configuration about the imine bond [1.280 (3) Å] is E. There are significant twists throughout the molecule. Firstly, the oxazole ring [r.m.s. deviation = 0.007 Å] is twisted away from the plane of the central —C═N—N═C— group as seen in the value of the O1—C7—C8—N2 torsion angle of -43.3 (2)°. Further, the ester group lies out of the plane through the oxazole ring with the O2—C3—C6—C7 torsion angle being 160.5 (2) °. The oxazole-O atoms as well as the ester-ethyl groups are orientated towards the 2-fold axis while the carbonyl-O atoms are directed away from the axis. The terminal methyl group of the ester lies out of the plane of the remaining non-H atoms [the C3—O3—C2—C1 torsion angle = 159.33 (19) °].
Both C—H···O, Table 1, and π···π interactions feature in the crystal packing. The C—H···O and π···π contacts between oxazole rings [3.5990 (11) Å for symmetry operation 3/2 - x, y, 1.5 - z] combine to link molecules into supramolecular arrays in the ac plane, Fig. 2. These partially interdigitate with centrosymmetrically related layers along the b axis allowing for the formation of additional π···π interactions [3.3903 (11) Å for symmetry operation 1 - x, 1 - y, 1 - z], Fig. 3.