organic compounds
A centrosymmetric monoclinic polymorph of N1,N4-bis(pyridin-3-ylmethylidene)benzene-1,4-diamine
aSchool of Applied Chemical Engineering, The Research Institute of Catalysis, Chonnam National University, Gwangju 500-757, Republic of Korea
*Correspondence e-mail: hakwang@chonnam.ac.kr
The complete molecule of the title compound, C18H14N4, is generated by the application of a centre of inversion. The dihedral angle between the central benzene ring and the pyridine ring is 31.88 (7)°. In the crystal, molecules are stacked in columns along the c axis and several intermolecular π–π interactions are present between the six-membered rings, the shortest centroid–centroid distance being 3.937 (2) Å. The structure reported herein represents a centrosymmetric polymorph of the previously reported non-centrosymmetric (P21) form [Kim et al. (2005). Bull. Korean Chem. Soc. 26, 892–898].
Related literature
For the N1,N4-bis(pyridin-3-ylmethylene)benzene-1,4-diamine, see: Kim et al. (2005). For the of N1,N4-bis(pyridin-2-ylmethylene)benzene-1,4-diamine, see: Chanda et al. (2002); Ball et al. (2004).
ofExperimental
Crystal data
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Data collection: SMART (Bruker, 2000); cell SAINT (Bruker, 2000); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and PLATON (Spek, 2009); software used to prepare material for publication: SHELXL97.
Supporting information
10.1107/S1600536811030789/tk2772sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811030789/tk2772Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536811030789/tk2772Isup3.cml
1,4-Phenylenediamine (1.0812 g, 9.998 mmol) and 3-pyridinecarboxaldehyde (2.1447 g, 20.023 mmol) in CH3CN (30 ml) were stirred for 3 h at room temperature. The precipitate was then separated by filtration, washed with CH3CN and ether, and dried under vacuum, to give a yellow powder (1.8899 g). Crystals suitable for X-ray analysis were obtained by slow evaporation from its ethylacetate solution.
H atoms were positioned geometrically and allowed to ride on their respective parent atoms [C—H = 0.95 Å and Uiso(H) = 1.2Ueq(C)].
Data collection: SMART (Bruker, 2000); cell
SAINT (Bruker, 2000); data reduction: SAINT (Bruker, 2000); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and PLATON (Spek, 2009); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).C18H14N4 | F(000) = 300 |
Mr = 286.33 | Dx = 1.301 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 1327 reflections |
a = 16.622 (6) Å | θ = 2.5–28.2° |
b = 6.171 (2) Å | µ = 0.08 mm−1 |
c = 7.159 (2) Å | T = 200 K |
β = 95.732 (8)° | Plate, yellow |
V = 730.6 (4) Å3 | 0.22 × 0.14 × 0.11 mm |
Z = 2 |
Bruker SMART 1000 CCD diffractometer | 1790 independent reflections |
Radiation source: fine-focus sealed tube | 1027 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.049 |
ϕ and ω scans | θmax = 28.3°, θmin = 2.5° |
Absorption correction: multi-scan (SADABS; Bruker, 2000) | h = −22→19 |
Tmin = 0.825, Tmax = 1.000 | k = −8→8 |
5128 measured reflections | l = −8→9 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.053 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.152 | H-atom parameters constrained |
S = 1.03 | w = 1/[σ2(Fo2) + (0.064P)2 + 0.0036P] where P = (Fo2 + 2Fc2)/3 |
1790 reflections | (Δ/σ)max < 0.001 |
100 parameters | Δρmax = 0.21 e Å−3 |
0 restraints | Δρmin = −0.24 e Å−3 |
C18H14N4 | V = 730.6 (4) Å3 |
Mr = 286.33 | Z = 2 |
Monoclinic, P21/c | Mo Kα radiation |
a = 16.622 (6) Å | µ = 0.08 mm−1 |
b = 6.171 (2) Å | T = 200 K |
c = 7.159 (2) Å | 0.22 × 0.14 × 0.11 mm |
β = 95.732 (8)° |
Bruker SMART 1000 CCD diffractometer | 1790 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2000) | 1027 reflections with I > 2σ(I) |
Tmin = 0.825, Tmax = 1.000 | Rint = 0.049 |
5128 measured reflections |
R[F2 > 2σ(F2)] = 0.053 | 0 restraints |
wR(F2) = 0.152 | H-atom parameters constrained |
S = 1.03 | Δρmax = 0.21 e Å−3 |
1790 reflections | Δρmin = −0.24 e Å−3 |
100 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
N1 | 0.40327 (10) | 0.2126 (3) | 0.3182 (2) | 0.0434 (5) | |
N2 | 0.16109 (9) | 0.0893 (2) | 0.4230 (2) | 0.0296 (4) | |
C1 | 0.32643 (12) | 0.1772 (3) | 0.3548 (3) | 0.0374 (5) | |
H1 | 0.3091 | 0.0310 | 0.3622 | 0.045* | |
C2 | 0.27031 (11) | 0.3394 (3) | 0.3825 (3) | 0.0298 (5) | |
C3 | 0.29604 (12) | 0.5530 (3) | 0.3732 (3) | 0.0426 (6) | |
H3 | 0.2602 | 0.6690 | 0.3922 | 0.051* | |
C4 | 0.37490 (13) | 0.5940 (3) | 0.3356 (3) | 0.0501 (6) | |
H4 | 0.3938 | 0.7387 | 0.3282 | 0.060* | |
C5 | 0.42572 (13) | 0.4208 (3) | 0.3092 (3) | 0.0439 (6) | |
H5 | 0.4795 | 0.4514 | 0.2831 | 0.053* | |
C6 | 0.18734 (11) | 0.2849 (3) | 0.4232 (3) | 0.0300 (5) | |
H6 | 0.1520 | 0.3990 | 0.4507 | 0.036* | |
C7 | 0.07963 (11) | 0.0508 (3) | 0.4617 (2) | 0.0264 (4) | |
C8 | 0.06382 (11) | −0.1381 (3) | 0.5601 (2) | 0.0293 (5) | |
H8 | 0.1070 | −0.2333 | 0.6006 | 0.035* | |
C9 | 0.01465 (11) | 0.1882 (3) | 0.4004 (2) | 0.0286 (4) | |
H9 | 0.0243 | 0.3158 | 0.3318 | 0.034* |
U11 | U22 | U33 | U12 | U13 | U23 | |
N1 | 0.0308 (10) | 0.0441 (11) | 0.0568 (12) | 0.0014 (8) | 0.0123 (8) | 0.0005 (8) |
N2 | 0.0263 (9) | 0.0297 (9) | 0.0338 (8) | −0.0027 (7) | 0.0080 (6) | 0.0001 (7) |
C1 | 0.0320 (12) | 0.0327 (11) | 0.0488 (12) | −0.0006 (8) | 0.0108 (9) | 0.0010 (9) |
C2 | 0.0266 (10) | 0.0296 (10) | 0.0337 (10) | −0.0018 (8) | 0.0057 (8) | −0.0005 (8) |
C3 | 0.0331 (12) | 0.0279 (11) | 0.0688 (14) | 0.0000 (9) | 0.0149 (10) | −0.0012 (10) |
C4 | 0.0388 (13) | 0.0348 (12) | 0.0790 (17) | −0.0103 (10) | 0.0176 (11) | 0.0000 (11) |
C5 | 0.0288 (11) | 0.0456 (13) | 0.0586 (13) | −0.0069 (10) | 0.0113 (10) | 0.0003 (10) |
C6 | 0.0261 (10) | 0.0307 (11) | 0.0338 (10) | 0.0001 (8) | 0.0060 (8) | −0.0016 (8) |
C7 | 0.0248 (10) | 0.0278 (10) | 0.0274 (9) | −0.0017 (7) | 0.0063 (7) | −0.0026 (7) |
C8 | 0.0273 (10) | 0.0284 (10) | 0.0325 (10) | 0.0003 (8) | 0.0038 (8) | 0.0007 (8) |
C9 | 0.0310 (11) | 0.0264 (10) | 0.0288 (9) | −0.0011 (8) | 0.0048 (8) | 0.0018 (7) |
N1—C5 | 1.341 (3) | C4—C5 | 1.387 (3) |
N1—C1 | 1.347 (2) | C4—H4 | 0.9500 |
N2—C6 | 1.283 (2) | C5—H5 | 0.9500 |
N2—C7 | 1.429 (2) | C6—H6 | 0.9500 |
C1—C2 | 1.396 (3) | C7—C8 | 1.401 (2) |
C1—H1 | 0.9500 | C7—C9 | 1.408 (3) |
C2—C3 | 1.389 (3) | C8—C9i | 1.396 (3) |
C2—C6 | 1.476 (3) | C8—H8 | 0.9500 |
C3—C4 | 1.387 (3) | C9—C8i | 1.396 (3) |
C3—H3 | 0.9500 | C9—H9 | 0.9500 |
C5—N1—C1 | 116.01 (18) | N1—C5—H5 | 118.1 |
C6—N2—C7 | 118.98 (16) | C4—C5—H5 | 118.1 |
N1—C1—C2 | 124.86 (18) | N2—C6—C2 | 122.54 (17) |
N1—C1—H1 | 117.6 | N2—C6—H6 | 118.7 |
C2—C1—H1 | 117.6 | C2—C6—H6 | 118.7 |
C3—C2—C1 | 117.39 (18) | C8—C7—C9 | 118.75 (16) |
C3—C2—C6 | 121.57 (17) | C8—C7—N2 | 117.70 (16) |
C1—C2—C6 | 121.03 (17) | C9—C7—N2 | 123.50 (16) |
C4—C3—C2 | 118.94 (19) | C9i—C8—C7 | 120.79 (16) |
C4—C3—H3 | 120.5 | C9i—C8—H8 | 119.6 |
C2—C3—H3 | 120.5 | C7—C8—H8 | 119.6 |
C5—C4—C3 | 119.1 (2) | C8i—C9—C7 | 120.45 (17) |
C5—C4—H4 | 120.5 | C8i—C9—H9 | 119.8 |
C3—C4—H4 | 120.5 | C7—C9—H9 | 119.8 |
N1—C5—C4 | 123.7 (2) | ||
C5—N1—C1—C2 | 0.2 (3) | C3—C2—C6—N2 | 176.31 (18) |
N1—C1—C2—C3 | −0.5 (3) | C1—C2—C6—N2 | −4.7 (3) |
N1—C1—C2—C6 | −179.58 (18) | C6—N2—C7—C8 | −145.41 (17) |
C1—C2—C3—C4 | 0.5 (3) | C6—N2—C7—C9 | 37.0 (2) |
C6—C2—C3—C4 | 179.57 (19) | C9—C7—C8—C9i | −1.0 (3) |
C2—C3—C4—C5 | −0.2 (3) | N2—C7—C8—C9i | −178.72 (16) |
C1—N1—C5—C4 | 0.2 (3) | C8—C7—C9—C8i | 1.0 (3) |
C3—C4—C5—N1 | −0.2 (4) | N2—C7—C9—C8i | 178.58 (16) |
C7—N2—C6—C2 | −179.26 (16) |
Symmetry code: (i) −x, −y, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C18H14N4 |
Mr | 286.33 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 200 |
a, b, c (Å) | 16.622 (6), 6.171 (2), 7.159 (2) |
β (°) | 95.732 (8) |
V (Å3) | 730.6 (4) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.08 |
Crystal size (mm) | 0.22 × 0.14 × 0.11 |
Data collection | |
Diffractometer | Bruker SMART 1000 CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2000) |
Tmin, Tmax | 0.825, 1.000 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 5128, 1790, 1027 |
Rint | 0.049 |
(sin θ/λ)max (Å−1) | 0.668 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.053, 0.152, 1.03 |
No. of reflections | 1790 |
No. of parameters | 100 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.21, −0.24 |
Computer programs: SMART (Bruker, 2000), SAINT (Bruker, 2000), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997) and PLATON (Spek, 2009).
Acknowledgements
This work was supported by the Priority Research Centers Program through the National Research Foundation of Korea (NRF) funded by the Ministry of Education, Science and Technology (2010–0029626).
References
Ball, P. J., Shtoyko, T. R., Bauer, J. A. K., Oldham, W. J. & Connick, W. B. (2004). Inorg. Chem. 43, 622–632. Web of Science CSD CrossRef PubMed CAS Google Scholar
Bruker (2000). SADABS, SMART and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Chanda, N., Mondal, B., Puranik, V. G. & Lahiri, G. K. (2002). Polyhedron, 21, 2033–2043. Web of Science CSD CrossRef CAS Google Scholar
Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565. CrossRef IUCr Journals Google Scholar
Kim, H. N., Lee, H. K. & Lee, S. W. (2005). Bull. Korean Chem. Soc. 26, 892–898. CAS Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Spek, A. L. (2009). Acta Cryst. D65, 148–155. Web of Science CrossRef CAS IUCr Journals Google Scholar
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The title compound is a polydentate Schiff-base (Fig. 1), which can act as a monodentate or bis(monodentate) ligand, that is, one N atom or two N atoms of the pyridyl groups can coordinate to a metal ion or metal ions. The crystal structure of the this compound was previously reported in the non-centrosymmetric space group P21 (Kim et al., 2005). The centrosymmetric structure presented here is essentially the same as the published structure and represents a new monoclinic polymorph. In the present study the compound is isomorphous with the analogous compound N1,N4-bis(pyridin-2-ylmethylene)benzene-1,4-diamine (Chanda et al., 2002; Ball et al., 2004).
The asymmetric unit of the title molecule contains one half of the formula unit (Fig. 1); a centre of inversion is located in the midpoint of the compound, and therefore the two pyridyl rings are exactly parallel. The dihedral angle between the central benzene ring and the pyridine ring is 31.88 (7) °. The N2—C6/7 bond lengths and the C6—N2—C7 bond angle indicate that the imino N2 atom is sp2-hybridized [d(N2═C6) = 1.283 (2) Å and d(N2—C7) = 1.429 (2) Å; <C6—N2—C7 = 119.0 (2) °]. In the crystal structure, the molecules are stacked in columns along the c axis and several intermolecular π-π interactions are present between the six-membered rings, with a shortest centroid-centroid distance being 3.937 (2) Å (Fig. 2).