organic compounds
5-[(E)-(2-Fluorobenzylidene)amino]-2-hydroxybenzoic acid
aDepartment of Physics, University of Sargodha, Sargodha, Pakistan, bDepartment of Chemistry, University of Sargodha, Sargodha, Pakistan, and cInstitute of Chemical and Pharmaceutical Sciences, The University of Faisalabad, Faisalabad, Pakistan
*Correspondence e-mail: dmntahir_uos@yahoo.com
In the title compound, C14H10FNO3, the dihedral angle between the two benzene rings is 32.66 (14)°. An S(6) ring motif is formed due to an intramolecular O—H⋯O hydrogen bond between the hydroxy and carbonyl groups. In the crystal, molecules are consolidated into dimers with R22(8) ring motifs by pairs of O—H⋯O hydrogen bonds.
Related literature
For background and related crystal structures, see: Tahir & Shad (2010); Tahir et al. (2010a,b,c). For graph-set notation, see: Bernstein et al. (1995).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2009); cell SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and PLATON (Spek, 2009); software used to prepare material for publication: WinGX (Farrugia, 1999) and PLATON.
Supporting information
10.1107/S160053681103162X/tk2774sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S160053681103162X/tk2774Isup2.hkl
Supporting information file. DOI: 10.1107/S160053681103162X/tk2774Isup3.cml
Equimolar quantities of 5-amino-2-hydroxybenzoic acid and 2-fluorobenzaldehyde were refluxed in methanol for 45 min resulting in yellow-brown solution. The solution was kept at room temperature which afforded violet prisms after 48 h.
The coordinates of the hydroxyl-H atoms were refined freely, and with Uiso(H) = 1.2Ueq(O). The C-bound H-atoms were positioned geometrically (C–H = 0.93 Å) and refined as riding with Uiso(H) = 1.2Ueq(C).
Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and PLATON (Spek, 2009); software used to prepare material for publication: WinGX (Farrugia, 1999) and PLATON (Spek, 2009).C14H10FNO3 | F(000) = 536 |
Mr = 259.23 | Dx = 1.447 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 1156 reflections |
a = 15.5688 (16) Å | θ = 2.5–25.3° |
b = 4.7139 (4) Å | µ = 0.11 mm−1 |
c = 16.2248 (16) Å | T = 296 K |
β = 92.412 (4)° | Prism, violet |
V = 1189.7 (2) Å3 | 0.30 × 0.22 × 0.18 mm |
Z = 4 |
Bruker Kappa APEXII CCD diffractometer | 2161 independent reflections |
Radiation source: fine-focus sealed tube | 1156 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.079 |
Detector resolution: 8.10 pixels mm-1 | θmax = 25.3°, θmin = 2.5° |
ω scans | h = −18→18 |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | k = −5→5 |
Tmin = 0.972, Tmax = 0.983 | l = −19→19 |
15880 measured reflections |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.048 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.127 | w = 1/[σ2(Fo2) + (0.0531P)2 + 0.0687P] where P = (Fo2 + 2Fc2)/3 |
S = 1.01 | (Δ/σ)max < 0.001 |
2161 reflections | Δρmax = 0.17 e Å−3 |
179 parameters | Δρmin = −0.16 e Å−3 |
0 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.012 (2) |
C14H10FNO3 | V = 1189.7 (2) Å3 |
Mr = 259.23 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 15.5688 (16) Å | µ = 0.11 mm−1 |
b = 4.7139 (4) Å | T = 296 K |
c = 16.2248 (16) Å | 0.30 × 0.22 × 0.18 mm |
β = 92.412 (4)° |
Bruker Kappa APEXII CCD diffractometer | 2161 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 1156 reflections with I > 2σ(I) |
Tmin = 0.972, Tmax = 0.983 | Rint = 0.079 |
15880 measured reflections |
R[F2 > 2σ(F2)] = 0.048 | 0 restraints |
wR(F2) = 0.127 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.01 | Δρmax = 0.17 e Å−3 |
2161 reflections | Δρmin = −0.16 e Å−3 |
179 parameters |
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
F1 | 0.52929 (12) | −0.3124 (5) | 0.56845 (13) | 0.1012 (9) | |
O1 | 0.06399 (12) | 0.7307 (4) | 0.55258 (12) | 0.0525 (8) | |
O2 | 0.05067 (11) | 0.8698 (4) | 0.42115 (11) | 0.0495 (7) | |
O3 | 0.14217 (13) | 0.6175 (4) | 0.31108 (12) | 0.0542 (8) | |
N1 | 0.28499 (15) | −0.0194 (4) | 0.57191 (14) | 0.0515 (9) | |
C1 | 0.08505 (17) | 0.7167 (5) | 0.47509 (18) | 0.0417 (10) | |
C2 | 0.15088 (16) | 0.5080 (5) | 0.45759 (15) | 0.0375 (9) | |
C3 | 0.17635 (17) | 0.4699 (5) | 0.37661 (17) | 0.0434 (10) | |
C4 | 0.23883 (18) | 0.2707 (6) | 0.36048 (19) | 0.0519 (11) | |
C5 | 0.27501 (17) | 0.1124 (6) | 0.42340 (19) | 0.0514 (11) | |
C6 | 0.25157 (17) | 0.1477 (5) | 0.50467 (18) | 0.0442 (10) | |
C7 | 0.18911 (17) | 0.3435 (5) | 0.52047 (17) | 0.0432 (9) | |
C8 | 0.3618 (2) | −0.1094 (6) | 0.57106 (19) | 0.0549 (11) | |
C9 | 0.39800 (18) | −0.2991 (5) | 0.63403 (18) | 0.0487 (11) | |
C10 | 0.4808 (2) | −0.4013 (6) | 0.6308 (2) | 0.0584 (11) | |
C11 | 0.5166 (2) | −0.5910 (7) | 0.6868 (2) | 0.0656 (12) | |
C12 | 0.4681 (2) | −0.6790 (7) | 0.7506 (2) | 0.0651 (12) | |
C13 | 0.3861 (2) | −0.5771 (7) | 0.7575 (2) | 0.0671 (12) | |
C14 | 0.35127 (19) | −0.3924 (6) | 0.70003 (19) | 0.0607 (11) | |
H1 | 0.0276 (18) | 0.869 (6) | 0.5597 (16) | 0.0630* | |
H3 | 0.1029 (18) | 0.734 (6) | 0.3343 (18) | 0.0651* | |
H4 | 0.25617 | 0.24473 | 0.30685 | 0.0624* | |
H5 | 0.31634 | −0.02248 | 0.41163 | 0.0618* | |
H7 | 0.17190 | 0.36688 | 0.57425 | 0.0518* | |
H8 | 0.39610 | −0.05202 | 0.52858 | 0.0659* | |
H11 | 0.57227 | −0.65780 | 0.68150 | 0.0788* | |
H12 | 0.49076 | −0.80744 | 0.78922 | 0.0777* | |
H13 | 0.35381 | −0.63410 | 0.80153 | 0.0803* | |
H14 | 0.29529 | −0.32804 | 0.70528 | 0.0729* |
U11 | U22 | U33 | U12 | U13 | U23 | |
F1 | 0.0551 (12) | 0.1469 (19) | 0.1031 (17) | 0.0089 (12) | 0.0211 (12) | 0.0358 (14) |
O1 | 0.0594 (14) | 0.0547 (12) | 0.0440 (13) | 0.0135 (10) | 0.0101 (10) | −0.0004 (10) |
O2 | 0.0534 (13) | 0.0504 (12) | 0.0450 (12) | 0.0078 (10) | 0.0043 (10) | 0.0038 (10) |
O3 | 0.0612 (14) | 0.0565 (13) | 0.0456 (13) | 0.0044 (10) | 0.0096 (10) | 0.0015 (10) |
N1 | 0.0474 (16) | 0.0455 (14) | 0.0613 (17) | 0.0035 (12) | −0.0011 (13) | 0.0003 (12) |
C1 | 0.0439 (18) | 0.0368 (15) | 0.0443 (18) | −0.0081 (14) | 0.0023 (15) | −0.0009 (14) |
C2 | 0.0398 (16) | 0.0336 (14) | 0.0391 (17) | −0.0055 (12) | 0.0034 (13) | −0.0014 (13) |
C3 | 0.0431 (17) | 0.0398 (15) | 0.0476 (18) | −0.0057 (14) | 0.0050 (14) | 0.0029 (14) |
C4 | 0.053 (2) | 0.0519 (18) | 0.0517 (19) | −0.0005 (16) | 0.0132 (16) | −0.0083 (16) |
C5 | 0.0437 (18) | 0.0448 (17) | 0.066 (2) | 0.0021 (14) | 0.0058 (16) | −0.0085 (16) |
C6 | 0.0419 (17) | 0.0376 (15) | 0.0529 (19) | −0.0046 (14) | 0.0009 (14) | −0.0005 (14) |
C7 | 0.0454 (17) | 0.0377 (15) | 0.0469 (17) | −0.0032 (13) | 0.0075 (14) | −0.0038 (13) |
C8 | 0.049 (2) | 0.0498 (17) | 0.066 (2) | −0.0056 (15) | 0.0025 (16) | 0.0062 (16) |
C9 | 0.0419 (18) | 0.0461 (17) | 0.058 (2) | 0.0001 (14) | 0.0006 (15) | −0.0005 (15) |
C10 | 0.0444 (19) | 0.068 (2) | 0.063 (2) | −0.0011 (17) | 0.0061 (17) | 0.0017 (18) |
C11 | 0.049 (2) | 0.078 (2) | 0.069 (2) | 0.0194 (18) | −0.0075 (18) | −0.0099 (19) |
C12 | 0.065 (2) | 0.068 (2) | 0.061 (2) | 0.0096 (18) | −0.0120 (19) | 0.0010 (17) |
C13 | 0.056 (2) | 0.085 (2) | 0.060 (2) | 0.0020 (19) | −0.0019 (17) | 0.0117 (19) |
C14 | 0.0460 (19) | 0.069 (2) | 0.067 (2) | 0.0058 (17) | 0.0003 (17) | 0.0043 (18) |
F1—C10 | 1.354 (4) | C8—C9 | 1.454 (4) |
O1—C1 | 1.314 (3) | C9—C14 | 1.391 (4) |
O2—C1 | 1.239 (3) | C9—C10 | 1.379 (4) |
O3—C3 | 1.360 (3) | C10—C11 | 1.376 (4) |
O1—H1 | 0.88 (3) | C11—C12 | 1.371 (5) |
O3—H3 | 0.92 (3) | C12—C13 | 1.373 (4) |
N1—C6 | 1.426 (3) | C13—C14 | 1.371 (4) |
N1—C8 | 1.270 (4) | C4—H4 | 0.9300 |
C1—C2 | 1.457 (4) | C5—H5 | 0.9300 |
C2—C7 | 1.395 (4) | C7—H7 | 0.9300 |
C2—C3 | 1.400 (4) | C8—H8 | 0.9300 |
C3—C4 | 1.385 (4) | C11—H11 | 0.9300 |
C4—C5 | 1.367 (4) | C12—H12 | 0.9300 |
C5—C6 | 1.393 (4) | C13—H13 | 0.9300 |
C6—C7 | 1.373 (4) | C14—H14 | 0.9300 |
C1—O1—H1 | 110.7 (17) | F1—C10—C9 | 118.1 (3) |
C3—O3—H3 | 103.4 (18) | F1—C10—C11 | 118.1 (3) |
C6—N1—C8 | 119.3 (2) | C10—C11—C12 | 118.3 (3) |
O1—C1—O2 | 121.9 (2) | C11—C12—C13 | 120.0 (3) |
O1—C1—C2 | 115.2 (2) | C12—C13—C14 | 120.6 (3) |
O2—C1—C2 | 122.8 (3) | C9—C14—C13 | 121.3 (3) |
C1—C2—C3 | 119.9 (2) | C3—C4—H4 | 120.00 |
C3—C2—C7 | 119.1 (2) | C5—C4—H4 | 120.00 |
C1—C2—C7 | 121.0 (2) | C4—C5—H5 | 119.00 |
O3—C3—C4 | 117.0 (2) | C6—C5—H5 | 119.00 |
O3—C3—C2 | 123.4 (2) | C2—C7—H7 | 119.00 |
C2—C3—C4 | 119.6 (2) | C6—C7—H7 | 119.00 |
C3—C4—C5 | 120.0 (3) | N1—C8—H8 | 119.00 |
C4—C5—C6 | 121.7 (3) | C9—C8—H8 | 119.00 |
C5—C6—C7 | 118.2 (3) | C10—C11—H11 | 121.00 |
N1—C6—C7 | 117.8 (2) | C12—C11—H11 | 121.00 |
N1—C6—C5 | 123.8 (2) | C11—C12—H12 | 120.00 |
C2—C7—C6 | 121.4 (3) | C13—C12—H12 | 120.00 |
N1—C8—C9 | 122.4 (3) | C12—C13—H13 | 120.00 |
C10—C9—C14 | 116.0 (3) | C14—C13—H13 | 120.00 |
C8—C9—C10 | 121.6 (3) | C9—C14—H14 | 119.00 |
C8—C9—C14 | 122.4 (3) | C13—C14—H14 | 119.00 |
C9—C10—C11 | 123.7 (3) | ||
C8—N1—C6—C5 | 33.0 (4) | C4—C5—C6—C7 | 1.4 (4) |
C8—N1—C6—C7 | −150.8 (3) | N1—C6—C7—C2 | −177.6 (2) |
C6—N1—C8—C9 | −175.0 (2) | C5—C6—C7—C2 | −1.3 (4) |
O1—C1—C2—C3 | 178.2 (2) | N1—C8—C9—C10 | 178.1 (3) |
O1—C1—C2—C7 | −1.6 (3) | N1—C8—C9—C14 | −0.8 (4) |
O2—C1—C2—C3 | −1.4 (4) | C8—C9—C10—F1 | 2.2 (4) |
O2—C1—C2—C7 | 178.8 (2) | C8—C9—C10—C11 | −177.0 (3) |
C1—C2—C3—O3 | −0.6 (4) | C14—C9—C10—F1 | −178.9 (3) |
C1—C2—C3—C4 | −179.9 (2) | C14—C9—C10—C11 | 1.9 (4) |
C7—C2—C3—O3 | 179.2 (2) | C8—C9—C14—C13 | 178.3 (3) |
C7—C2—C3—C4 | −0.1 (4) | C10—C9—C14—C13 | −0.6 (4) |
C1—C2—C7—C6 | −179.6 (2) | F1—C10—C11—C12 | 179.2 (3) |
C3—C2—C7—C6 | 0.6 (4) | C9—C10—C11—C12 | −1.6 (5) |
O3—C3—C4—C5 | −179.1 (2) | C10—C11—C12—C13 | −0.2 (5) |
C2—C3—C4—C5 | 0.2 (4) | C11—C12—C13—C14 | 1.5 (5) |
C3—C4—C5—C6 | −0.8 (4) | C12—C13—C14—C9 | −1.1 (5) |
C4—C5—C6—N1 | 177.5 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···O2i | 0.88 (3) | 1.77 (3) | 2.642 (3) | 176 (3) |
O3—H3···O2 | 0.92 (3) | 1.78 (3) | 2.617 (3) | 152 (3) |
Symmetry code: (i) −x, −y+2, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C14H10FNO3 |
Mr | 259.23 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 296 |
a, b, c (Å) | 15.5688 (16), 4.7139 (4), 16.2248 (16) |
β (°) | 92.412 (4) |
V (Å3) | 1189.7 (2) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.11 |
Crystal size (mm) | 0.30 × 0.22 × 0.18 |
Data collection | |
Diffractometer | Bruker Kappa APEXII CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.972, 0.983 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 15880, 2161, 1156 |
Rint | 0.079 |
(sin θ/λ)max (Å−1) | 0.600 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.048, 0.127, 1.01 |
No. of reflections | 2161 |
No. of parameters | 179 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.17, −0.16 |
Computer programs: APEX2 (Bruker, 2009), SAINT (Bruker, 2009), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997) and PLATON (Spek, 2009), WinGX (Farrugia, 1999) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···O2i | 0.88 (3) | 1.77 (3) | 2.642 (3) | 176 (3) |
O3—H3···O2 | 0.92 (3) | 1.78 (3) | 2.617 (3) | 152 (3) |
Symmetry code: (i) −x, −y+2, −z+1. |
Acknowledgements
The authors acknowledge the provision of funds for the purchase of the diffractometer and encouragement by Dr Muhammad Akram Chaudhary, former Vice Chancellor, University of Sargodha. Pakistan.
References
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Recently, we reported crystal structures containing the 5-amino-2-hydroxybenzoic acid moiety i.e. (II) 2-hydroxy-5-[(E)-(1H-indol-3-ylmethylidene)azaniumyl]benzoate (Tahir & Shad, 2010), (III) i.e. 2-{[(E)-1,3-benzodioxol-5-yl]methylideneamino}benzoic acid (Tahir et al., 2010b), (IV) i.e. 5-[(E)-(2,6-dichlorobenzylidene)amino]-2-hydroxybenzoic acid (Tahir et al., 2010a) and (V) i.e. 2-hydroxy-5-{[(E)-4-methoxybenzylidene]azaniumyl}benzoate (Tahir et al., 2010c). The title compound (I), (Fig. 1) was prepared in continuation of the synthesis of various molecules having 5-amino-2-hydroxybenzoic acid.
In (I), group A (C1—C7/N1/O1—O3), derived from 5-amino-2-hydroxybenzoic acid, and group B (C8—C14/F1), derived from 2-fluorobenzaldehyde, are each planar with r.m.s. deviations of 0.0164 and 0.0182 Å, respectively. The A/B dihedral angle between is 32.78 (7)°. There exists an intramolecular O—H···O hydrogen bond which completes a S(6) ring motif (Table 1, Fig. 1). In the crystal packing the molecules are stabilized in the form of dimers due to intermolecular O—H···O hydrogen bonds (Table 1, Fig. 2) which form a R22(8) ring motif (Bernstein et al., 1995).