metal-organic compounds
Diaquabis(2-hydroxy-5-methoxybenzoato-κO1)zinc
aSchool of Life Sciences, Fujian Agriculture and Forestry University, Fuzhou, Fujian 350002, People's Republic of China, and bMaterial Engineering College, Fujian Agriculture and Forestry University, Fuzhou, Fujian 350002, People's Republic of China
*Correspondence e-mail: ltdl@sina.com
The title compound, [Zn(C8H7O4)2(H2O)2], has been synthesized by hydrothermal methods. The ZnII atom, whose is a twofold axis, is four coordinated by two O atoms from 5-methoxysalicylate anions and two aqua O atoms in a distorted tetrahedral geometry. In the crystal, molecules are linked into a layer by O—H⋯O hydrogen bonds, which stabilize the packing.
Related literature
For coordination polymers constructed by hydrogen bonds, see: Li et al. (2006); Jiang et al. (2011). For the structure of the complex with 5-methoxysalicylate ligands and its analogues, see: Púčeková-Repická et al. (2007); Valigura et al. (2006).
Experimental
Crystal data
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Refinement
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Data collection: CrystalClear (Rigaku, 2007); cell CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008) and DIAMOND (Brandenburg, 2005); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536811030893/zk2017sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811030893/zk2017Isup2.hkl
The title compound was hydrothermally synthesized under autogenous pressure. A mixture of ZnCl2 (68 mg, 0.5 mmol), 5-MeOsal (84 mg, 0.5 mmol), and H2O (6 ml) was sealed in a stainless reactor with Teflon liner, which was heated to 358 K for two days. After slow cooling to room temperature, prism pale yellow crystals were obtained as a major phase by filtration, which were washed with distilled water, and finally dried in air(65% yield).Anal. calc. for C16H18O10Zn: C, 44.11; H, 4.16; O, 36.72%; Found: C, 44.32; H, 4.15; O, 36.23%. IR (KBr pellet):3448(w), 3290(w), 2839(w), 2615(w), 1661(s), 1616(s), 1486(s), 1428(s), 1223(s), 1188(s), 1033(m), 824(m), 788(m), 761(m), 678(m), 555(m), 464(w).
All the hydrogen atoms were discernible in the difference electron density maps. However, the H atoms were situated into idealized positions and constrained by the riding model approximation: O—Hhydroxyl = 0.869, Caryl—Haryl = 0.95, Cmethyl—Hmethyl = 0.98 and UisoHaryl = 1.2Ueq(C), UisoHmethyl = 1.5Ueq(C). The highest electron-density peak is situated 1.2 Å from Zn1 and the deepest hole 0.78 Å from Zn1.
Data collection: CrystalClear (Rigaku, 2007); cell
CrystalClear (Rigaku, 2007); data reduction: CrystalClear (Rigaku, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008) and DIAMOND (Brandenburg, 2005); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).[Zn(C8H7O4)2(H2O)2] | F(000) = 896 |
Mr = 435.67 | Dx = 1.670 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2yc | Cell parameters from 2689 reflections |
a = 25.113 (4) Å | θ = 2.1–27.5° |
b = 5.5065 (6) Å | µ = 1.47 mm−1 |
c = 12.648 (3) Å | T = 173 K |
β = 97.845 (12)° | Prism, pale yellow |
V = 1732.7 (5) Å3 | 0.20 × 0.20 × 0.20 mm |
Z = 4 |
Rigaku Mercury CCD/AFC diffractometer | 1986 independent reflections |
Radiation source: fine-focus sealed tube | 1837 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.027 |
ϕ and ω scans | θmax = 27.5°, θmin = 3.3° |
Absorption correction: multi-scan (CrystalClear; Rigaku, 2007) | h = −31→32 |
Tmin = 0.745, Tmax = 0.752 | k = −7→7 |
6403 measured reflections | l = −16→15 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.030 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.082 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.08 | w = 1/[σ2(Fo2) + (0.0494P)2] where P = (Fo2 + 2Fc2)/3 |
1986 reflections | (Δ/σ)max = 0.001 |
136 parameters | Δρmax = 0.27 e Å−3 |
0 restraints | Δρmin = −0.69 e Å−3 |
[Zn(C8H7O4)2(H2O)2] | V = 1732.7 (5) Å3 |
Mr = 435.67 | Z = 4 |
Monoclinic, C2/c | Mo Kα radiation |
a = 25.113 (4) Å | µ = 1.47 mm−1 |
b = 5.5065 (6) Å | T = 173 K |
c = 12.648 (3) Å | 0.20 × 0.20 × 0.20 mm |
β = 97.845 (12)° |
Rigaku Mercury CCD/AFC diffractometer | 1986 independent reflections |
Absorption correction: multi-scan (CrystalClear; Rigaku, 2007) | 1837 reflections with I > 2σ(I) |
Tmin = 0.745, Tmax = 0.752 | Rint = 0.027 |
6403 measured reflections |
R[F2 > 2σ(F2)] = 0.030 | 0 restraints |
wR(F2) = 0.082 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.08 | Δρmax = 0.27 e Å−3 |
1986 reflections | Δρmin = −0.69 e Å−3 |
136 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Zn1 | 0.0000 | 0.94430 (5) | 0.2500 | 0.03390 (13) | |
O1 | 0.07205 (5) | 0.8141 (2) | 0.23289 (10) | 0.0398 (3) | |
O2 | 0.01520 (5) | 0.6023 (2) | 0.12225 (11) | 0.0379 (3) | |
O3 | 0.17146 (5) | 0.6892 (3) | 0.27805 (10) | 0.0433 (3) | |
O4 | 0.02830 (7) | 1.1674 (3) | 0.36768 (14) | 0.0556 (4) | |
O5 | 0.12868 (6) | −0.0192 (3) | −0.03081 (11) | 0.0432 (3) | |
C1 | 0.06216 (6) | 0.6401 (3) | 0.16527 (12) | 0.0294 (3) | |
C2 | 0.10816 (6) | 0.4881 (3) | 0.14311 (13) | 0.0269 (3) | |
C3 | 0.15997 (7) | 0.5201 (3) | 0.19989 (13) | 0.0301 (3) | |
C4 | 0.20140 (7) | 0.3720 (4) | 0.17747 (14) | 0.0358 (4) | |
H4 | 0.2364 | 0.3946 | 0.2153 | 0.043* | |
C5 | 0.19295 (7) | 0.1916 (3) | 0.10108 (14) | 0.0355 (4) | |
H5 | 0.2219 | 0.0912 | 0.0866 | 0.043* | |
C6 | 0.09982 (6) | 0.3065 (3) | 0.06567 (12) | 0.0297 (3) | |
H6 | 0.0651 | 0.2848 | 0.0266 | 0.036* | |
C7 | 0.14159 (7) | 0.1582 (3) | 0.04532 (12) | 0.0307 (3) | |
C8 | 0.17070 (8) | −0.1737 (4) | −0.05639 (16) | 0.0470 (5) | |
H8A | 0.1989 | −0.0751 | −0.0818 | 0.070* | |
H8B | 0.1562 | −0.2881 | −0.1123 | 0.070* | |
H8C | 0.1859 | −0.2639 | 0.0074 | 0.070* | |
H1 | 0.1412 (11) | 0.767 (5) | 0.275 (2) | 0.065 (8)* | |
H4A | 0.0164 (10) | 1.283 (5) | 0.378 (2) | 0.052 (7)* | |
H4B | 0.0570 (12) | 1.135 (6) | 0.407 (2) | 0.081 (9)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Zn1 | 0.02475 (17) | 0.03398 (19) | 0.0432 (2) | 0.000 | 0.00526 (12) | 0.000 |
O1 | 0.0334 (6) | 0.0375 (7) | 0.0492 (7) | −0.0006 (5) | 0.0087 (5) | −0.0142 (5) |
O2 | 0.0256 (6) | 0.0363 (6) | 0.0511 (7) | 0.0028 (5) | 0.0025 (5) | −0.0042 (5) |
O3 | 0.0319 (7) | 0.0497 (8) | 0.0462 (7) | −0.0039 (6) | −0.0015 (6) | −0.0164 (6) |
O4 | 0.0486 (9) | 0.0465 (9) | 0.0660 (10) | 0.0189 (8) | −0.0124 (8) | −0.0210 (8) |
O5 | 0.0393 (7) | 0.0429 (7) | 0.0464 (8) | 0.0083 (6) | 0.0020 (6) | −0.0165 (6) |
C1 | 0.0283 (8) | 0.0280 (8) | 0.0330 (8) | −0.0011 (7) | 0.0081 (6) | 0.0022 (6) |
C2 | 0.0244 (8) | 0.0279 (7) | 0.0288 (8) | −0.0005 (7) | 0.0051 (6) | 0.0021 (6) |
C3 | 0.0277 (8) | 0.0338 (8) | 0.0287 (8) | −0.0039 (7) | 0.0027 (6) | −0.0002 (6) |
C4 | 0.0237 (8) | 0.0458 (9) | 0.0366 (8) | 0.0012 (8) | −0.0002 (7) | 0.0002 (7) |
C5 | 0.0279 (8) | 0.0418 (9) | 0.0372 (8) | 0.0090 (7) | 0.0053 (7) | 0.0016 (7) |
C6 | 0.0251 (7) | 0.0330 (8) | 0.0302 (7) | −0.0006 (6) | 0.0015 (6) | −0.0004 (6) |
C7 | 0.0321 (8) | 0.0309 (8) | 0.0291 (7) | 0.0017 (7) | 0.0045 (6) | −0.0003 (6) |
C8 | 0.0519 (12) | 0.0448 (11) | 0.0466 (10) | 0.0112 (9) | 0.0155 (9) | −0.0063 (8) |
Zn1—O4 | 1.9852 (15) | C2—C6 | 1.395 (2) |
Zn1—O4i | 1.9852 (15) | C2—C3 | 1.409 (2) |
Zn1—O1 | 1.9854 (13) | C3—C4 | 1.382 (2) |
Zn1—O1i | 1.9854 (13) | C4—C5 | 1.382 (3) |
O1—C1 | 1.286 (2) | C4—H4 | 0.9500 |
O2—C1 | 1.247 (2) | C5—C7 | 1.395 (2) |
O3—C3 | 1.360 (2) | C5—H5 | 0.9500 |
O3—H1 | 0.87 (3) | C6—C7 | 1.381 (2) |
O4—H4A | 0.73 (3) | C6—H6 | 0.9500 |
O4—H4B | 0.84 (3) | C8—H8A | 0.9800 |
O5—C7 | 1.379 (2) | C8—H8B | 0.9800 |
O5—C8 | 1.427 (2) | C8—H8C | 0.9800 |
C1—C2 | 1.484 (2) | ||
O4—Zn1—O4i | 103.54 (11) | C4—C3—C2 | 119.37 (16) |
O4—Zn1—O1 | 93.83 (6) | C3—C4—C5 | 121.33 (15) |
O4i—Zn1—O1 | 112.34 (7) | C3—C4—H4 | 119.3 |
O4—Zn1—O1i | 112.34 (7) | C5—C4—H4 | 119.3 |
O4i—Zn1—O1i | 93.83 (6) | C4—C5—C7 | 119.43 (16) |
O1—Zn1—O1i | 137.66 (7) | C4—C5—H5 | 120.3 |
C1—O1—Zn1 | 104.20 (10) | C7—C5—H5 | 120.3 |
C3—O3—H1 | 102.2 (17) | C7—C6—C2 | 120.63 (14) |
Zn1—O4—H4A | 125 (2) | C7—C6—H6 | 119.7 |
Zn1—O4—H4B | 120 (2) | C2—C6—H6 | 119.7 |
H4A—O4—H4B | 115 (3) | O5—C7—C6 | 115.91 (14) |
C7—O5—C8 | 118.04 (15) | O5—C7—C5 | 124.02 (15) |
O2—C1—O1 | 120.00 (15) | C6—C7—C5 | 120.07 (15) |
O2—C1—C2 | 122.53 (15) | O5—C8—H8A | 109.5 |
O1—C1—C2 | 117.46 (14) | O5—C8—H8B | 109.5 |
C6—C2—C3 | 119.16 (15) | H8A—C8—H8B | 109.5 |
C6—C2—C1 | 119.38 (14) | O5—C8—H8C | 109.5 |
C3—C2—C1 | 121.45 (15) | H8A—C8—H8C | 109.5 |
O3—C3—C4 | 117.55 (15) | H8B—C8—H8C | 109.5 |
O3—C3—C2 | 123.07 (16) |
Symmetry code: (i) −x, y, −z+1/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
O3—H1···O1 | 0.87 (3) | 1.76 (3) | 2.5771 (19) | 155 (2) |
O4—H4A···O2ii | 0.73 (3) | 1.93 (3) | 2.643 (2) | 169 (3) |
O4—H4B···O5iii | 0.84 (3) | 1.97 (3) | 2.790 (2) | 167 (3) |
Symmetry codes: (ii) −x, y+1, −z+1/2; (iii) x, −y+1, z+1/2. |
Experimental details
Crystal data | |
Chemical formula | [Zn(C8H7O4)2(H2O)2] |
Mr | 435.67 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 173 |
a, b, c (Å) | 25.113 (4), 5.5065 (6), 12.648 (3) |
β (°) | 97.845 (12) |
V (Å3) | 1732.7 (5) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 1.47 |
Crystal size (mm) | 0.20 × 0.20 × 0.20 |
Data collection | |
Diffractometer | Rigaku Mercury CCD/AFC diffractometer |
Absorption correction | Multi-scan (CrystalClear; Rigaku, 2007) |
Tmin, Tmax | 0.745, 0.752 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 6403, 1986, 1837 |
Rint | 0.027 |
(sin θ/λ)max (Å−1) | 0.650 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.030, 0.082, 1.08 |
No. of reflections | 1986 |
No. of parameters | 136 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.27, −0.69 |
Computer programs: CrystalClear (Rigaku, 2007), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008) and DIAMOND (Brandenburg, 2005), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
O3—H1···O1 | 0.87 (3) | 1.76 (3) | 2.5771 (19) | 155 (2) |
O4—H4A···O2i | 0.73 (3) | 1.93 (3) | 2.643 (2) | 169 (3) |
O4—H4B···O5ii | 0.84 (3) | 1.97 (3) | 2.790 (2) | 167 (3) |
Symmetry codes: (i) −x, y+1, −z+1/2; (ii) x, −y+1, z+1/2. |
Acknowledgements
This work was supported by a grant from the National Science Foundation of China (30771682).
References
Brandenburg, K. (2005). DIAMOND. Crystal Impact GbR, Bonn, Germany. Google Scholar
Jiang, Y. M., Yin, Z., He, K. H., Zeng, M. H. & Kurmoo, M. (2011). Inorg. Chem. 50, 2329–2333. Google Scholar
Li, T., Hu, S. M., Li, Z. H. & Du, S. W. (2006). Chin. J. Struct. Chem. 25, 85–89. Google Scholar
Púčeková-Repická, Z., Moncol, J., Valigura, D., Lis, T., Korabik, M., Melník, M., Mroziński, J. & Mazúr, M. (2007). J. Coord. Chem. 60, 2449–2460. Google Scholar
Rigaku (2007). CrystalClear. Rigaku Corporation, Tokyo, Japan. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Valigura, D., Moncol, J., Korabik, M., Púčeková, Z., Lis, T., Mroziński, J. & Melník, M. (2006). Eur. J. Inorg. Chem. pp. 3813–3817. Web of Science CSD CrossRef Google Scholar
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Generally, the self-assembly of inorganic metal species and organic ligands can be achieved by the use of noncovalent contacts. Among the noncovalent contacts, hydrogen bonds have the great influence in determining the geometry of the obtained metal complexes (Li et al. 2006; Jiang et al. 2011). In the other hand, the reactions of transition metal ions with 5-MeOsal ligands and its analogues are relatively rare (Valigura et al., 2006; Púčeková-Repická et al.,2007). In this paper we present results of hydrothermal reactions of ZnCl2 and 5-MeOsal ligand. Title Compound was isolated as molecular complex and the intermolecular O—H—O hydrogen bonds in (I) together with intramolecular O—H—O hydrogen bonds promote the molecules into two-dimensional structure.
A single-crystal X-ray diffraction study of (I) reveals a discrete coordination complex that crystallizes in the space group C2/c. Coordination of the Zn atoms in (I) is a slightly distorted tetrahedral geometry with each Zn atom bonding to four oxygen atoms, in which two from the monodentate 5-MeOSal ligands and two from the waters (Fig.1). Further inspection into the structure reveals that there are O—H—O intramolecular and intermolecular hydrogen bonds. (Table 1). As described in Figure 2, the intramolecular hydrogen bonds from hydroxyl hydrogen atom of the 5-MeOsal anions to the coordinated carboxylate oxygen atoms O3—H—O1 with the distance of 2.577 (1) Å, then create six-memberedrings(O2C3H), and stabilize the structure. The mean deviation from the planes C(2)—C(3)—C(4)—C(5)—C(6)-(7), and O(1)—H(13)—O(3)—C(3)—C(2)—C(1)are 0.0032 and 0.0229 Å,respectively. Furthermore the dihedral angles between planes is 0.9°, indicating a planar structure for this ligand. Furthermore the uncoordinated oxygen atoms of the carboxyl group and methoxy group of the 5-MeOsal anions(O2, O5) are hydrogen bonded with the hydrogen atoms of coordinated water with the distances of 2.643 (2) and 2.790 (2) Å, respectively. As a result every coordinated water molecule is connected by two oxygen atoms through hydrogen bonds and the isolated units are to be form a 2-D layer. A prospective view of the structure packing from a direction is presented in Fig. 3.