metal-organic compounds
Poly[diaqua(μ-4,4′-bipyridine-κ2N:N′)[μ-2,2′-(p-phenylenedioxy)diacetato-κ2O:O′]cadmium]
aDepartment of Chemistry, Dezhou University, Dezhou, Shandong 253023, People's Republic of China
*Correspondence e-mail: dzgywang@126.com
In the title compound, [Cd(C10H8O6)(C10H8N2)(H2O)2]n, the CdII ion has inversion symmetry and is coordinated by O atoms from two water molecules and two bridging 2,2′-(μ-p-phenylenedioxy)diacetate ligands and two N atoms from two 4,4′-bipyridine ligands, giving a slightly distorted octahedral geometry. The diacetate and 4,4′-bipyridine ligands also lie across inversion centers. The bridging ligands form layers parallel to (11), with adjacent layers interconnected via O—H⋯O hydrogen bonds between the coordinated water molecules and the carboxylate O atoms, giving a three-dimensional supramolecular architecture.
Related literature
Benzene-1,4-dioxydiacetic acid is often used to construct coordination polymers owing to the flexibility of the two phenoxyacetate groups, see: Gong et al. (2010); Li et al. (2010); Zhang & Li (2010).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2007); cell SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SIR97 (Altomare et al., 1999); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: WinGX (Farrugia, 1999).
Supporting information
10.1107/S1600536811031400/zs2132sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811031400/zs2132Isup2.hkl
A mixture of benzene-1,4-dioxydiacetic acid (0.023 g, 0.1 mmol), 4,4'-bipyridine (0.016 g, 0.1 mmol), NaOH (0.008 g, 0.2 mmol) and Cd(NO3)2. 4H2O (0.038 g, 0.1 mmol) in H2O (7.0 ml) was placed in a 16 ml Teflon-lined stainless steel vessel and heated to 160 °C for 72 h, then cooled to room temperature at a rate of -5 °C/h. Colorless plate crystals are obtained after filtration.
All H atoms bonded to C atoms were added according to theoretical models, assigned isotropic displacement parameters and allowed to ride on their respective parent atoms [C—H = 0.93–0.97Å and Uiso(H) = 1.2Ueq(C)]. The H atoms attached to O atoms of the water were located from the Fourier map with the O—H distances being fixed at 0.85Å and allowed to ride on their parent oxygen atoms in the final cycles of
with Uiso(H) = 1.2Ueq(O).Data collection: APEX2 (Bruker, 2007); cell
SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SIR97 (Altomare et al., 1999); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: WinGX (Farrugia, 1999).[Cd(C10H8O6)(C10H8N2)(H2O)2] | Z = 1 |
Mr = 528.78 | F(000) = 266 |
Triclinic, P1 | Dx = 1.785 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 5.8612 (6) Å | Cell parameters from 1861 reflections |
b = 8.2313 (8) Å | θ = 2.6–27.8° |
c = 10.8659 (11) Å | µ = 1.16 mm−1 |
α = 105.640 (1)° | T = 296 K |
β = 97.6785 (12)° | Plate, colorless |
γ = 97.931 (1)° | 0.21 × 0.11 × 0.04 mm |
V = 491.91 (9) Å3 |
Bruker APEXII CCD area-detector diffractometer | 1691 independent reflections |
Radiation source: fine-focus sealed tube | 1667 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.014 |
ϕ and ω scans | θmax = 25.0°, θmin = 2.0° |
Absorption correction: multi-scan (SADABS; Bruker, 2001) | h = −6→5 |
Tmin = 0.789, Tmax = 0.956 | k = −9→9 |
2533 measured reflections | l = −12→12 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.027 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.067 | H-atom parameters constrained |
S = 1.14 | w = 1/[σ2(Fo2) + (0.0276P)2 + 0.6011P] where P = (Fo2 + 2Fc2)/3 |
1691 reflections | (Δ/σ)max < 0.001 |
142 parameters | Δρmax = 0.45 e Å−3 |
0 restraints | Δρmin = −0.39 e Å−3 |
[Cd(C10H8O6)(C10H8N2)(H2O)2] | γ = 97.931 (1)° |
Mr = 528.78 | V = 491.91 (9) Å3 |
Triclinic, P1 | Z = 1 |
a = 5.8612 (6) Å | Mo Kα radiation |
b = 8.2313 (8) Å | µ = 1.16 mm−1 |
c = 10.8659 (11) Å | T = 296 K |
α = 105.640 (1)° | 0.21 × 0.11 × 0.04 mm |
β = 97.6785 (12)° |
Bruker APEXII CCD area-detector diffractometer | 1691 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2001) | 1667 reflections with I > 2σ(I) |
Tmin = 0.789, Tmax = 0.956 | Rint = 0.014 |
2533 measured reflections |
R[F2 > 2σ(F2)] = 0.027 | 0 restraints |
wR(F2) = 0.067 | H-atom parameters constrained |
S = 1.14 | Δρmax = 0.45 e Å−3 |
1691 reflections | Δρmin = −0.39 e Å−3 |
142 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.3288 (6) | 0.2750 (4) | 0.2007 (3) | 0.0314 (7) | |
H1 | 0.2097 | 0.3389 | 0.2098 | 0.038* | |
C2 | 0.3250 (6) | 0.1600 (4) | 0.0818 (3) | 0.0313 (7) | |
H2 | 0.2047 | 0.1479 | 0.0130 | 0.038* | |
C3 | 0.4983 (5) | 0.0624 (4) | 0.0637 (3) | 0.0221 (6) | |
C4 | 0.6685 (6) | 0.0859 (5) | 0.1715 (3) | 0.0371 (8) | |
H4 | 0.7881 | 0.0223 | 0.1656 | 0.044* | |
C5 | 0.6607 (6) | 0.2037 (5) | 0.2877 (3) | 0.0386 (8) | |
H5 | 0.7771 | 0.2169 | 0.3586 | 0.046* | |
C6 | 0.3586 (6) | 0.7739 (4) | 0.3662 (3) | 0.0294 (7) | |
C7 | 0.1802 (6) | 0.8591 (4) | 0.3031 (3) | 0.0358 (8) | |
H7A | 0.1348 | 0.9458 | 0.3706 | 0.043* | |
H7B | 0.2542 | 0.9168 | 0.2478 | 0.043* | |
C8 | −0.1959 (6) | 0.4972 (5) | 0.0564 (3) | 0.0334 (8) | |
H8 | −0.3285 | 0.4941 | 0.0948 | 0.040* | |
C9 | −0.0019 (6) | 0.6241 (4) | 0.1162 (3) | 0.0296 (7) | |
C10 | 0.1962 (6) | 0.6247 (4) | 0.0590 (3) | 0.0336 (8) | |
H10 | 0.3294 | 0.7076 | 0.0986 | 0.040* | |
N1 | 0.4958 (5) | 0.2990 (3) | 0.3034 (2) | 0.0271 (6) | |
O1 | 0.2781 (4) | 0.6403 (3) | 0.3942 (2) | 0.0314 (5) | |
O2 | 0.5658 (5) | 0.8448 (3) | 0.3879 (3) | 0.0511 (7) | |
O3 | −0.0252 (4) | 0.7435 (3) | 0.2275 (2) | 0.0362 (5) | |
O1W | 0.1584 (4) | 0.3373 (3) | 0.5183 (2) | 0.0385 (6) | |
H1W | 0.0509 | 0.3664 | 0.5598 | 0.046* | |
H2W | 0.2264 | 0.2728 | 0.5543 | 0.046* | |
Cd1 | 0.5000 | 0.5000 | 0.5000 | 0.02535 (13) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0336 (18) | 0.0297 (17) | 0.0304 (17) | 0.0152 (14) | 0.0023 (14) | 0.0051 (14) |
C2 | 0.0350 (19) | 0.0312 (17) | 0.0244 (16) | 0.0121 (14) | −0.0063 (13) | 0.0049 (13) |
C3 | 0.0242 (16) | 0.0216 (14) | 0.0195 (15) | 0.0021 (12) | 0.0033 (12) | 0.0057 (12) |
C4 | 0.0302 (18) | 0.050 (2) | 0.0268 (17) | 0.0192 (16) | −0.0002 (14) | −0.0001 (15) |
C5 | 0.035 (2) | 0.053 (2) | 0.0215 (16) | 0.0162 (17) | −0.0027 (14) | 0.0008 (15) |
C6 | 0.0330 (19) | 0.0304 (17) | 0.0256 (16) | 0.0132 (15) | 0.0093 (14) | 0.0038 (13) |
C7 | 0.042 (2) | 0.0319 (18) | 0.0371 (19) | 0.0124 (16) | 0.0072 (16) | 0.0128 (15) |
C8 | 0.0250 (17) | 0.048 (2) | 0.0336 (18) | 0.0095 (15) | 0.0092 (14) | 0.0195 (16) |
C9 | 0.0302 (18) | 0.0369 (18) | 0.0292 (17) | 0.0125 (15) | 0.0055 (14) | 0.0187 (14) |
C10 | 0.0268 (17) | 0.0386 (18) | 0.0363 (19) | −0.0002 (14) | 0.0025 (14) | 0.0170 (15) |
N1 | 0.0279 (14) | 0.0280 (13) | 0.0237 (13) | 0.0062 (11) | 0.0038 (11) | 0.0043 (11) |
O1 | 0.0348 (13) | 0.0325 (12) | 0.0306 (12) | 0.0111 (10) | 0.0048 (10) | 0.0136 (10) |
O2 | 0.0339 (15) | 0.0488 (16) | 0.078 (2) | 0.0089 (12) | 0.0097 (13) | 0.0296 (15) |
O3 | 0.0324 (13) | 0.0453 (14) | 0.0327 (12) | 0.0138 (11) | 0.0062 (10) | 0.0108 (11) |
O1W | 0.0268 (13) | 0.0500 (15) | 0.0409 (14) | 0.0076 (11) | 0.0066 (10) | 0.0164 (12) |
Cd1 | 0.0268 (2) | 0.02717 (19) | 0.02091 (18) | 0.00758 (13) | 0.00313 (12) | 0.00441 (13) |
C1—N1 | 1.334 (4) | C7—H7B | 0.9700 |
C1—C2 | 1.376 (5) | C8—C10ii | 1.379 (5) |
C1—H1 | 0.9300 | C8—C9 | 1.384 (5) |
C2—C3 | 1.382 (4) | C8—H8 | 0.9300 |
C2—H2 | 0.9300 | C9—O3 | 1.374 (4) |
C3—C4 | 1.385 (4) | C9—C10 | 1.388 (5) |
C3—C3i | 1.489 (6) | C10—C8ii | 1.379 (5) |
C4—C5 | 1.379 (5) | C10—H10 | 0.9300 |
C4—H4 | 0.9300 | N1—Cd1 | 2.317 (3) |
C5—N1 | 1.327 (4) | O1—Cd1 | 2.253 (2) |
C5—H5 | 0.9300 | O1W—Cd1 | 2.313 (3) |
C6—O2 | 1.234 (4) | O1W—H1W | 0.8467 |
C6—O1 | 1.265 (4) | O1W—H2W | 0.8499 |
C6—C7 | 1.526 (5) | Cd1—O1iii | 2.253 (2) |
C7—O3 | 1.424 (4) | Cd1—O1Wiii | 2.313 (3) |
C7—H7A | 0.9700 | Cd1—N1iii | 2.317 (3) |
N1—C1—C2 | 122.9 (3) | O3—C9—C10 | 125.2 (3) |
N1—C1—H1 | 118.5 | C8—C9—C10 | 118.7 (3) |
C2—C1—H1 | 118.5 | C8ii—C10—C9 | 120.2 (3) |
C1—C2—C3 | 120.6 (3) | C8ii—C10—H10 | 119.9 |
C1—C2—H2 | 119.7 | C9—C10—H10 | 119.9 |
C3—C2—H2 | 119.7 | C5—N1—C1 | 117.0 (3) |
C2—C3—C4 | 116.1 (3) | C5—N1—Cd1 | 121.5 (2) |
C2—C3—C3i | 122.3 (3) | C1—N1—Cd1 | 121.6 (2) |
C4—C3—C3i | 121.6 (3) | C6—O1—Cd1 | 123.8 (2) |
C5—C4—C3 | 120.0 (3) | C9—O3—C7 | 117.8 (3) |
C5—C4—H4 | 120.0 | Cd1—O1W—H1W | 130.3 |
C3—C4—H4 | 120.0 | Cd1—O1W—H2W | 95.3 |
N1—C5—C4 | 123.4 (3) | H1W—O1W—H2W | 107.2 |
N1—C5—H5 | 118.3 | O1iii—Cd1—O1 | 180.000 (1) |
C4—C5—H5 | 118.3 | O1iii—Cd1—O1W | 91.72 (10) |
O2—C6—O1 | 126.7 (3) | O1—Cd1—O1W | 88.28 (10) |
O2—C6—C7 | 116.8 (3) | O1iii—Cd1—O1Wiii | 88.28 (10) |
O1—C6—C7 | 116.5 (3) | O1—Cd1—O1Wiii | 91.72 (10) |
O3—C7—C6 | 114.1 (3) | O1W—Cd1—O1Wiii | 180.0 |
O3—C7—H7A | 108.7 | O1iii—Cd1—N1 | 90.66 (9) |
C6—C7—H7A | 108.7 | O1—Cd1—N1 | 89.34 (9) |
O3—C7—H7B | 108.7 | O1W—Cd1—N1 | 88.66 (9) |
C6—C7—H7B | 108.7 | O1Wiii—Cd1—N1 | 91.34 (9) |
H7A—C7—H7B | 107.6 | O1iii—Cd1—N1iii | 89.34 (9) |
C10ii—C8—C9 | 121.2 (3) | O1—Cd1—N1iii | 90.66 (9) |
C10ii—C8—H8 | 119.4 | O1W—Cd1—N1iii | 91.34 (9) |
C9—C8—H8 | 119.4 | O1Wiii—Cd1—N1iii | 88.66 (9) |
O3—C9—C8 | 116.2 (3) | N1—Cd1—N1iii | 180.000 (1) |
N1—C1—C2—C3 | 0.0 (5) | C7—C6—O1—Cd1 | −175.7 (2) |
C1—C2—C3—C4 | 1.1 (5) | C8—C9—O3—C7 | 170.1 (3) |
C1—C2—C3—C3i | −179.4 (3) | C10—C9—O3—C7 | −11.8 (4) |
C2—C3—C4—C5 | −1.1 (5) | C6—C7—O3—C9 | −66.8 (4) |
C3i—C3—C4—C5 | 179.5 (4) | C6—O1—Cd1—O1W | 170.5 (2) |
C3—C4—C5—N1 | −0.1 (6) | C6—O1—Cd1—O1Wiii | −9.5 (2) |
O2—C6—C7—O3 | 152.4 (3) | C6—O1—Cd1—N1 | −100.8 (2) |
O1—C6—C7—O3 | −29.5 (4) | C6—O1—Cd1—N1iii | 79.2 (2) |
C10ii—C8—C9—O3 | 177.0 (3) | C5—N1—Cd1—O1iii | −22.8 (3) |
C10ii—C8—C9—C10 | −1.3 (5) | C1—N1—Cd1—O1iii | 157.9 (3) |
O3—C9—C10—C8ii | −176.8 (3) | C5—N1—Cd1—O1 | 157.2 (3) |
C8—C9—C10—C8ii | 1.3 (5) | C1—N1—Cd1—O1 | −22.1 (3) |
C4—C5—N1—C1 | 1.2 (5) | C5—N1—Cd1—O1W | −114.5 (3) |
C4—C5—N1—Cd1 | −178.2 (3) | C1—N1—Cd1—O1W | 66.2 (3) |
C2—C1—N1—C5 | −1.1 (5) | C5—N1—Cd1—O1Wiii | 65.5 (3) |
C2—C1—N1—Cd1 | 178.2 (3) | C1—N1—Cd1—O1Wiii | −113.8 (3) |
O2—C6—O1—Cd1 | 2.1 (5) |
Symmetry codes: (i) −x+1, −y, −z; (ii) −x, −y+1, −z; (iii) −x+1, −y+1, −z+1. |
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H2W···O2iii | 0.85 | 1.81 | 2.636 (4) | 165 |
O1W—H1W···O1iv | 0.85 | 2.05 | 2.858 (4) | 159 |
Symmetry codes: (iii) −x+1, −y+1, −z+1; (iv) −x, −y+1, −z+1. |
Experimental details
Crystal data | |
Chemical formula | [Cd(C10H8O6)(C10H8N2)(H2O)2] |
Mr | 528.78 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 296 |
a, b, c (Å) | 5.8612 (6), 8.2313 (8), 10.8659 (11) |
α, β, γ (°) | 105.640 (1), 97.6785 (12), 97.931 (1) |
V (Å3) | 491.91 (9) |
Z | 1 |
Radiation type | Mo Kα |
µ (mm−1) | 1.16 |
Crystal size (mm) | 0.21 × 0.11 × 0.04 |
Data collection | |
Diffractometer | Bruker APEXII CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2001) |
Tmin, Tmax | 0.789, 0.956 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 2533, 1691, 1667 |
Rint | 0.014 |
(sin θ/λ)max (Å−1) | 0.594 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.027, 0.067, 1.14 |
No. of reflections | 1691 |
No. of parameters | 142 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.45, −0.39 |
Computer programs: APEX2 (Bruker, 2007), SAINT (Bruker, 2007), SIR97 (Altomare et al., 1999), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008), WinGX (Farrugia, 1999).
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H2W···O2i | 0.85 | 1.81 | 2.636 (4) | 165 |
O1W—H1W···O1ii | 0.85 | 2.05 | 2.858 (4) | 159 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x, −y+1, −z+1. |
Acknowledgements
This work was supported financially by the Project of Shandong Province Higher Educational Science and Technology Program (grant No. J11LB56).
References
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Due to the flexibility of the two phenoxyacetate groups, benzene-1,4-dioxydiacetic acid is often used to construct coordination polymers (Zhang & Li, 2010; Gong et al., 2010; Li et al., 2010;). The title coordination polymer [Cd(C10H8O6)(C10H8N2)(H2O)2]n (I) was obtained under hydrothermal conditions, and its crystal structure is reported here .
The asymmetric unit of (I) is composed of one CdII cation lying on a crystallographic inversion centre, half a benzene-1,4-dioxydiacetate anion, half a 4,4'-bipyridine molecule and one water molecule. The CdII ion is coordinated by O atoms from two water molecules [Cd—O, 2.313 (3)Å] and two from bridging benzene-1,4-dioxydiacetate ligands [Cd—O, 2.253 (2) Å] and two N atoms from two 4,4'-bipyridine ligands [Cd—N, 2.317 (3) Å], giving a slightly distorted octahedral geometry (Fig. 1). The benzene-1,4-dioxydiacetate and 4,4'-bipyridine ligands also lie across inversion centers, with both bridging the CdII cations to form two-dimensional layers parallel to the (1 1 -1) plane (Fig. 2). These layers are further interconnected via O—H···O hydrogen bonds between the coordinated water molecules and the carboxylate O atoms, resulting in a three-dimensional supramolecular architecture (Table 1, Fig. 3).