organic compounds
(+)-(1S,5R,6R)-6-[(S)-1-Hydroxy-2-(methoxymethyloxy)ethyl]-1-methyl-3-trichloromethyl-2-aza-4,7-dioxabicyclo[3.3.0]oct-2-en-8-one
aSchool of Medicine, Keio University, Hiyoshi 4-1-1, Kohoku-ku, Yokohama 223-8521, Japan, and bDepartment of Applied Chemistry, Faculty of Science and Technology, Keio University, Hiyoshi 3-14-1, Kohoku-ku, Yokohama 223-8522, Japan
*Correspondence e-mail: oec@a6.keio.jp
In the title compound, C11H14Cl3NO6, the fused five-membered oxazoline and tetrahydrofuran rings are essentially planar with maximum deviations of 0.069 (1) and 0.031 (1) Å, respectively, and make a dihedral angle of 64.23 (11)° with each other. In the crystal, molecules are linked by O—H⋯O and C—H⋯O hydrogen bonds, forming chains along the b-axis direction. Further C—H⋯O hydrogen bonds are observed between the chains.
Related literature
For the synthesis, see: Oishi et al. (2012). For the isolation of sphingofungins, see: VanMiddlesworth, Giacobbe et al. (1992); VanMiddlesworth, Dufresne et al. (1992); Horn et al. (1992).
Experimental
Crystal data
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Data collection: APEX2 (Bruker, 2012); cell SAINT (Bruker, 2012); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: Mercury (Macrae et al., 2006); software used to prepare material for publication: SHELXL97.
Supporting information
10.1107/S1600536812042912/is5207sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536812042912/is5207Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536812042912/is5207Isup3.cdx
Supporting information file. DOI: 10.1107/S1600536812042912/is5207Isup4.cml
The title compound was obtained in a synthetic study of sphingofungins from D-ribose (Oishi et al., 2012), and recrystallized from ethyl acetate solution. [α]27D +83.1 (c 0.345, CHCl3); m.p. 409.7–411.2 K.
C-bound H atoms were positioned geometrically with C—H = 0.98–1.00 Å, and constrained to ride on their parent atoms with Uiso(H) = 1.2Ueq(C) or 1.5Ueq(methyl C). The H atom of hydroxyl group (O12) was placed guided by difference maps, with O—H = 0.84 Å and with Uiso(H) = 1.5Ueq(O). Three reflections (6 3 6, 6 3 7, 0 1 16) have been omitted in the final refinement.
Data collection: APEX2 (Bruker, 2012); cell
SAINT (Bruker, 2012); data reduction: SAINT (Bruker, 2012); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: Mercury (Macrae et al., 2006); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).C11H14Cl3NO6 | Dx = 1.636 Mg m−3 |
Mr = 362.58 | Melting point: 409.7 K |
Monoclinic, P21 | Mo Kα radiation, λ = 0.71073 Å |
a = 8.9311 (7) Å | Cell parameters from 5778 reflections |
b = 6.0283 (4) Å | θ = 2.3–25.1° |
c = 13.8694 (10) Å | µ = 0.65 mm−1 |
β = 99.699 (2)° | T = 90 K |
V = 736.05 (9) Å3 | Prism, colourless |
Z = 2 | 0.50 × 0.25 × 0.16 mm |
F(000) = 372 |
Bruker D8 goniometer diffractometer | 2364 independent reflections |
Radiation source: fine-focus sealed tube | 2291 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.028 |
Detector resolution: 10.4167 pixels mm-1 | θmax = 25.1°, θmin = 2.3° |
ω scans | h = −10→10 |
Absorption correction: multi-scan (SADABS; Bruker, 2012) | k = −7→6 |
Tmin = 0.738, Tmax = 0.904 | l = −16→16 |
6662 measured reflections |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.027 | H-atom parameters constrained |
wR(F2) = 0.069 | w = 1/[σ2(Fo2) + (0.0338P)2] where P = (Fo2 + 2Fc2)/3 |
S = 1.34 | (Δ/σ)max = 0.001 |
2364 reflections | Δρmax = 0.37 e Å−3 |
193 parameters | Δρmin = −0.22 e Å−3 |
1 restraint | Absolute structure: Flack (1983), 947 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: 0.01 (5) |
C11H14Cl3NO6 | V = 736.05 (9) Å3 |
Mr = 362.58 | Z = 2 |
Monoclinic, P21 | Mo Kα radiation |
a = 8.9311 (7) Å | µ = 0.65 mm−1 |
b = 6.0283 (4) Å | T = 90 K |
c = 13.8694 (10) Å | 0.50 × 0.25 × 0.16 mm |
β = 99.699 (2)° |
Bruker D8 goniometer diffractometer | 2364 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2012) | 2291 reflections with I > 2σ(I) |
Tmin = 0.738, Tmax = 0.904 | Rint = 0.028 |
6662 measured reflections |
R[F2 > 2σ(F2)] = 0.027 | H-atom parameters constrained |
wR(F2) = 0.069 | Δρmax = 0.37 e Å−3 |
S = 1.34 | Δρmin = −0.22 e Å−3 |
2364 reflections | Absolute structure: Flack (1983), 947 Friedel pairs |
193 parameters | Absolute structure parameter: 0.01 (5) |
1 restraint |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.7195 (2) | 0.5236 (4) | 0.43062 (15) | 0.0152 (5) | |
N2 | 0.7869 (2) | 0.3750 (3) | 0.36335 (12) | 0.0139 (4) | |
C3 | 0.8554 (2) | 0.5035 (4) | 0.31378 (15) | 0.0134 (5) | |
O4 | 0.85179 (17) | 0.7255 (3) | 0.32714 (10) | 0.0156 (3) | |
C5 | 0.7464 (2) | 0.7590 (4) | 0.39563 (15) | 0.0148 (5) | |
H5 | 0.7928 | 0.8550 | 0.4516 | 0.018* | |
C6 | 0.5893 (2) | 0.8481 (4) | 0.34831 (15) | 0.0142 (5) | |
H6 | 0.5652 | 0.9825 | 0.3851 | 0.017* | |
O7 | 0.48036 (16) | 0.6720 (3) | 0.36046 (10) | 0.0162 (4) | |
C8 | 0.5464 (2) | 0.4965 (4) | 0.40903 (15) | 0.0142 (5) | |
O9 | 0.47385 (18) | 0.3412 (3) | 0.42994 (10) | 0.0181 (4) | |
C10 | 0.5688 (3) | 0.9041 (4) | 0.24039 (15) | 0.0161 (5) | |
H10 | 0.6464 | 1.0185 | 0.2316 | 0.019* | |
C11 | 0.4125 (3) | 1.0049 (4) | 0.20566 (15) | 0.0165 (5) | |
H11A | 0.3335 | 0.9027 | 0.2216 | 0.020* | |
H11B | 0.4039 | 1.1462 | 0.2408 | 0.020* | |
O12 | 0.59596 (18) | 0.7153 (3) | 0.18539 (11) | 0.0208 (4) | |
H12 | 0.5132 | 0.6520 | 0.1642 | 0.031* | |
O13 | 0.38660 (19) | 1.0460 (3) | 0.10212 (11) | 0.0205 (4) | |
C14 | 0.4558 (3) | 1.2396 (4) | 0.07599 (16) | 0.0192 (5) | |
H14A | 0.4577 | 1.2365 | 0.0049 | 0.023* | |
H14B | 0.5622 | 1.2437 | 0.1105 | 0.023* | |
O15 | 0.38097 (18) | 1.4326 (3) | 0.09848 (11) | 0.0195 (4) | |
C16 | 0.2416 (3) | 1.4735 (5) | 0.03432 (17) | 0.0256 (6) | |
H16A | 0.1663 | 1.3625 | 0.0456 | 0.038* | |
H16B | 0.2582 | 1.4641 | −0.0336 | 0.038* | |
H16C | 0.2045 | 1.6220 | 0.0468 | 0.038* | |
C17 | 0.7852 (3) | 0.4676 (4) | 0.53576 (15) | 0.0194 (5) | |
H17A | 0.8962 | 0.4793 | 0.5454 | 0.029* | |
H17B | 0.7564 | 0.3159 | 0.5503 | 0.029* | |
H17C | 0.7455 | 0.5714 | 0.5796 | 0.029* | |
C18 | 0.9561 (2) | 0.4317 (4) | 0.24145 (15) | 0.0155 (5) | |
Cl19 | 0.95353 (6) | 0.14171 (10) | 0.22820 (4) | 0.02283 (16) | |
Cl20 | 1.14459 (6) | 0.51691 (10) | 0.28730 (4) | 0.02415 (16) | |
Cl21 | 0.89393 (7) | 0.55359 (12) | 0.12613 (4) | 0.03251 (19) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0208 (12) | 0.0143 (12) | 0.0113 (10) | 0.0026 (11) | 0.0052 (9) | −0.0013 (10) |
N2 | 0.0157 (10) | 0.0130 (10) | 0.0135 (8) | 0.0008 (8) | 0.0040 (8) | 0.0008 (8) |
C3 | 0.0127 (11) | 0.0159 (12) | 0.0107 (10) | −0.0001 (10) | −0.0005 (8) | −0.0026 (10) |
O4 | 0.0157 (8) | 0.0130 (8) | 0.0195 (8) | −0.0007 (7) | 0.0071 (6) | 0.0001 (7) |
C5 | 0.0158 (11) | 0.0172 (13) | 0.0122 (10) | 0.0006 (10) | 0.0050 (8) | −0.0015 (11) |
C6 | 0.0191 (12) | 0.0100 (11) | 0.0147 (10) | −0.0041 (10) | 0.0063 (9) | −0.0026 (10) |
O7 | 0.0162 (8) | 0.0161 (9) | 0.0174 (8) | −0.0006 (7) | 0.0061 (6) | 0.0032 (7) |
C8 | 0.0219 (12) | 0.0125 (12) | 0.0094 (10) | 0.0023 (11) | 0.0065 (9) | −0.0024 (10) |
O9 | 0.0228 (9) | 0.0154 (9) | 0.0174 (7) | −0.0033 (7) | 0.0074 (7) | 0.0001 (7) |
C10 | 0.0195 (12) | 0.0159 (12) | 0.0143 (10) | −0.0009 (10) | 0.0064 (9) | −0.0022 (10) |
C11 | 0.0216 (11) | 0.0175 (13) | 0.0109 (10) | −0.0012 (10) | 0.0041 (9) | 0.0026 (10) |
O12 | 0.0208 (9) | 0.0239 (9) | 0.0179 (8) | 0.0014 (8) | 0.0035 (7) | −0.0072 (8) |
O13 | 0.0294 (9) | 0.0177 (9) | 0.0135 (8) | −0.0011 (8) | 0.0010 (7) | 0.0023 (7) |
C14 | 0.0231 (13) | 0.0195 (12) | 0.0164 (11) | 0.0038 (11) | 0.0071 (9) | 0.0027 (11) |
O15 | 0.0219 (9) | 0.0171 (8) | 0.0194 (8) | 0.0012 (7) | 0.0038 (7) | 0.0004 (8) |
C16 | 0.0234 (13) | 0.0262 (15) | 0.0257 (12) | 0.0023 (11) | −0.0005 (10) | −0.0014 (12) |
C17 | 0.0190 (12) | 0.0231 (14) | 0.0168 (11) | 0.0052 (10) | 0.0048 (9) | 0.0037 (11) |
C18 | 0.0158 (12) | 0.0159 (12) | 0.0151 (11) | −0.0009 (10) | 0.0032 (9) | −0.0003 (10) |
Cl19 | 0.0254 (3) | 0.0168 (3) | 0.0290 (3) | −0.0034 (3) | 0.0126 (3) | −0.0074 (3) |
Cl20 | 0.0162 (3) | 0.0259 (3) | 0.0317 (3) | −0.0044 (3) | 0.0079 (2) | −0.0094 (3) |
Cl21 | 0.0345 (4) | 0.0461 (5) | 0.0202 (3) | 0.0192 (3) | 0.0139 (3) | 0.0130 (3) |
C1—N2 | 1.491 (3) | C11—H11A | 0.9900 |
C1—C17 | 1.515 (3) | C11—H11B | 0.9900 |
C1—C5 | 1.532 (3) | O12—H12 | 0.8400 |
C1—C8 | 1.533 (3) | O13—C14 | 1.396 (3) |
N2—C3 | 1.260 (3) | C14—O15 | 1.403 (3) |
C3—O4 | 1.352 (3) | C14—H14A | 0.9900 |
C3—C18 | 1.519 (3) | C14—H14B | 0.9900 |
O4—C5 | 1.459 (3) | O15—C16 | 1.424 (3) |
C5—C6 | 1.542 (3) | C16—H16A | 0.9800 |
C5—H5 | 1.0000 | C16—H16B | 0.9800 |
C6—O7 | 1.468 (3) | C16—H16C | 0.9800 |
C6—C10 | 1.515 (3) | C17—H17A | 0.9800 |
C6—H6 | 1.0000 | C17—H17B | 0.9800 |
O7—C8 | 1.337 (3) | C17—H17C | 0.9800 |
C8—O9 | 1.202 (3) | C18—Cl19 | 1.757 (3) |
C10—O12 | 1.414 (3) | C18—Cl21 | 1.763 (2) |
C10—C11 | 1.524 (3) | C18—Cl20 | 1.773 (2) |
C10—H10 | 1.0000 | Cl19—O4i | 3.0697 (17) |
C11—O13 | 1.437 (2) | Cl20—O7ii | 3.1419 (16) |
N2—C1—C17 | 109.67 (18) | O13—C11—H11A | 109.3 |
N2—C1—C5 | 104.89 (16) | C10—C11—H11A | 109.3 |
C17—C1—C5 | 117.1 (2) | O13—C11—H11B | 109.3 |
N2—C1—C8 | 108.29 (17) | C10—C11—H11B | 109.3 |
C17—C1—C8 | 112.22 (18) | H11A—C11—H11B | 107.9 |
C5—C1—C8 | 104.10 (18) | C10—O12—H12 | 109.5 |
C3—N2—C1 | 104.83 (19) | C14—O13—C11 | 113.55 (17) |
N2—C3—O4 | 120.6 (2) | O13—C14—O15 | 112.79 (17) |
N2—C3—C18 | 125.5 (2) | O13—C14—H14A | 109.0 |
O4—C3—C18 | 113.8 (2) | O15—C14—H14A | 109.0 |
C3—O4—C5 | 105.01 (17) | O13—C14—H14B | 109.0 |
O4—C5—C1 | 103.34 (17) | O15—C14—H14B | 109.0 |
O4—C5—C6 | 114.30 (16) | H14A—C14—H14B | 107.8 |
C1—C5—C6 | 106.11 (18) | C14—O15—C16 | 113.79 (18) |
O4—C5—H5 | 110.9 | O15—C16—H16A | 109.5 |
C1—C5—H5 | 110.9 | O15—C16—H16B | 109.5 |
C6—C5—H5 | 110.9 | H16A—C16—H16B | 109.5 |
O7—C6—C10 | 107.59 (17) | O15—C16—H16C | 109.5 |
O7—C6—C5 | 105.81 (18) | H16A—C16—H16C | 109.5 |
C10—C6—C5 | 116.62 (18) | H16B—C16—H16C | 109.5 |
O7—C6—H6 | 108.9 | C1—C17—H17A | 109.5 |
C10—C6—H6 | 108.9 | C1—C17—H17B | 109.5 |
C5—C6—H6 | 108.9 | H17A—C17—H17B | 109.5 |
C8—O7—C6 | 112.65 (16) | C1—C17—H17C | 109.5 |
O9—C8—O7 | 121.9 (2) | H17A—C17—H17C | 109.5 |
O9—C8—C1 | 127.1 (2) | H17B—C17—H17C | 109.5 |
O7—C8—C1 | 111.04 (19) | C3—C18—Cl19 | 110.75 (17) |
O12—C10—C11 | 112.46 (18) | C3—C18—Cl21 | 110.46 (16) |
O12—C10—C6 | 110.51 (19) | Cl19—C18—Cl21 | 108.87 (12) |
C11—C10—C6 | 110.68 (17) | C3—C18—Cl20 | 108.21 (15) |
O12—C10—H10 | 107.7 | Cl19—C18—Cl20 | 108.69 (13) |
C11—C10—H10 | 107.7 | Cl21—C18—Cl20 | 109.84 (12) |
C6—C10—H10 | 107.7 | C18—Cl19—O4i | 139.97 (8) |
O13—C11—C10 | 111.67 (17) | C18—Cl20—O7ii | 177.84 (8) |
C17—C1—N2—C3 | −118.3 (2) | C17—C1—C8—O9 | −47.7 (3) |
C5—C1—N2—C3 | 8.3 (2) | C5—C1—C8—O9 | −175.3 (2) |
C8—C1—N2—C3 | 119.0 (2) | N2—C1—C8—O7 | −105.6 (2) |
C1—N2—C3—O4 | −1.7 (3) | C17—C1—C8—O7 | 133.2 (2) |
C1—N2—C3—C18 | 173.61 (19) | C5—C1—C8—O7 | 5.6 (2) |
N2—C3—O4—C5 | −6.0 (3) | O7—C6—C10—O12 | −59.9 (2) |
C18—C3—O4—C5 | 178.18 (16) | C5—C6—C10—O12 | 58.7 (3) |
C3—O4—C5—C1 | 10.3 (2) | O7—C6—C10—C11 | 65.4 (2) |
C3—O4—C5—C6 | −104.5 (2) | C5—C6—C10—C11 | −176.0 (2) |
N2—C1—C5—O4 | −11.3 (2) | O12—C10—C11—O13 | −52.1 (3) |
C17—C1—C5—O4 | 110.49 (19) | C6—C10—C11—O13 | −176.20 (19) |
C8—C1—C5—O4 | −125.02 (17) | C10—C11—O13—C14 | −79.6 (2) |
N2—C1—C5—C6 | 109.24 (18) | C11—O13—C14—O15 | −74.1 (2) |
C17—C1—C5—C6 | −128.9 (2) | O13—C14—O15—C16 | −74.3 (2) |
C8—C1—C5—C6 | −4.4 (2) | N2—C3—C18—Cl19 | 4.6 (3) |
O4—C5—C6—O7 | 115.31 (19) | O4—C3—C18—Cl19 | −179.78 (15) |
C1—C5—C6—O7 | 2.1 (2) | N2—C3—C18—Cl21 | 125.3 (2) |
O4—C5—C6—C10 | −4.2 (3) | O4—C3—C18—Cl21 | −59.1 (2) |
C1—C5—C6—C10 | −117.4 (2) | N2—C3—C18—Cl20 | −114.4 (2) |
C10—C6—O7—C8 | 126.83 (19) | O4—C3—C18—Cl20 | 61.2 (2) |
C5—C6—O7—C8 | 1.5 (2) | C3—C18—Cl19—O4i | −12.9 (2) |
C6—O7—C8—O9 | 176.28 (19) | Cl21—C18—Cl19—O4i | −134.58 (9) |
C6—O7—C8—C1 | −4.6 (2) | Cl20—C18—Cl19—O4i | 105.81 (13) |
N2—C1—C8—O9 | 73.5 (3) |
Symmetry codes: (i) x, y−1, z; (ii) x+1, y, z. |
D—H···A | D—H | H···A | D···A | D—H···A |
O12—H12···O15i | 0.84 | 1.90 | 2.695 (2) | 157 |
C6—H6···O9iii | 1.00 | 2.43 | 3.402 (3) | 164 |
C17—H17C···O9iv | 0.98 | 2.53 | 3.320 (3) | 137 |
Symmetry codes: (i) x, y−1, z; (iii) x, y+1, z; (iv) −x+1, y+1/2, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C11H14Cl3NO6 |
Mr | 362.58 |
Crystal system, space group | Monoclinic, P21 |
Temperature (K) | 90 |
a, b, c (Å) | 8.9311 (7), 6.0283 (4), 13.8694 (10) |
β (°) | 99.699 (2) |
V (Å3) | 736.05 (9) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.65 |
Crystal size (mm) | 0.50 × 0.25 × 0.16 |
Data collection | |
Diffractometer | Bruker D8 goniometer diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2012) |
Tmin, Tmax | 0.738, 0.904 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 6662, 2364, 2291 |
Rint | 0.028 |
(sin θ/λ)max (Å−1) | 0.597 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.027, 0.069, 1.34 |
No. of reflections | 2364 |
No. of parameters | 193 |
No. of restraints | 1 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.37, −0.22 |
Absolute structure | Flack (1983), 947 Friedel pairs |
Absolute structure parameter | 0.01 (5) |
Computer programs: APEX2 (Bruker, 2012), SAINT (Bruker, 2012), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), Mercury (Macrae et al., 2006).
D—H···A | D—H | H···A | D···A | D—H···A |
O12—H12···O15i | 0.84 | 1.90 | 2.695 (2) | 157 |
C6—H6···O9ii | 1.00 | 2.43 | 3.402 (3) | 164 |
C17—H17C···O9iii | 0.98 | 2.53 | 3.320 (3) | 137 |
Symmetry codes: (i) x, y−1, z; (ii) x, y+1, z; (iii) −x+1, y+1/2, −z+1. |
Acknowledgements
We thank Professor S. Ohba, Professor N. Yoshioka and Dr C. Maeda (Keio University, Japan) for providing valuable advice.
References
Bruker (2012). APEX2, SAINT and SADABS. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Flack, H. D. (1983). Acta Cryst. A39, 876–881. CrossRef CAS Web of Science IUCr Journals Google Scholar
Horn, W. S., Smith, J. L., Bills, G. F., Raghoobar, S. L., Helms, G. L., Kurts, M. B., Marrinan, J. A., Frommer, B. R., Thornton, R. A. & Mandala, S. M. (1992). J. Antibiot. 45, 1692–1696. CrossRef PubMed CAS Google Scholar
Macrae, C. F., Edgington, P. R., McCabe, P., Pidcock, E., Shields, G. P., Taylor, R., Towler, M. & van de Streek, J. (2006). J. Appl. Cryst. 39, 453–457. Web of Science CrossRef CAS IUCr Journals Google Scholar
Oishi, H., Tsuzaki, S., Sato, T. & Chida, N. (2012). In preparation. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
VanMiddlesworth, F., Dufresne, C., Wincott, F. E., Mosley, R. T. & Wilson, K. E. (1992). Tetrahedron Lett. 33, 297–300. CAS Google Scholar
VanMiddlesworth, F., Giacobbe, R. A., Lopez, M., Garrity, G., Bland, J. A., Bartizal, K., Fromtling, R. A., Polishook, J., Zweerink, M., Edison, A. M., Rozdilsky, W., Wilson, K. E. & Monaghan, R. L. (1992). J. Antibiot. 45, 861–867. CrossRef PubMed CAS Google Scholar
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Sphingofungins are natural antifungal agents isolated from Aspergillus and reported to be potent inhibitors of the biosynthesis of sphingolipids (VanMiddlesworth, Giacobbe et al., 1992; VanMiddlesworth, Dufresne et al., 1992; Horn et al., 1992). The title compound (I), C11H14Cl3NO6, which has four contiguous stereogenic center including a tetra-substituted carbon with nitrogen (Fig. 1), was provided in a synthetic study on the natural products sphingofungins from D-ribose (Oishi et al., 2012). The absolute configurations were confirmed by the X-ray analysis as C1S, C5R, C6R and C10S. The crystal packing was stabilized by an intermolecular O—H···O hydrogen bond, forming molecular a chain along the b axis (Fig. 2). There are also C—H···O hydrogen bonds and intermolecular Cl···O short contacts, Cl19···O4 (x, y - 1, z) and Cl20···O7 (x + 1, y, z) being 3.070 (2) and 3.142 (2) Å, respectively.