organic compounds
2-Cyano-3-(2,3,6,7-tetrahydro-1H,5H-benzo[ij]quinolizin-9-yl)prop-2-enoic acid dimethyl sulfoxide monosolvate
aDepartment of Chemistry, Pennsylvania State University, University Park, PA 16802, USA
*Correspondence e-mail: hpy1@psu.edu
In dimethyl sulfoxide solvated 9-(2-carboxy-2-cyanovinyl)julolidine, C16H16N2O2·C2H6OS, the essentially planar –CH=(CN)–CO2H substituent (r.m.s. deviation = 0.014 Å) is almost coplanar with respect to the benzene ring, the dihedral angle between the two planes being 0.48 (2)°. The conformations of the fused, non-aromatic rings were found to be half-chair. In the crystal, the acid molecule forms a hydrogen bond to the O atom of the solvent molecule. The acid molecule is disordered over two positions with respect to the methylene C atoms in a 1:1 ratio. The crystal studied was found to be a racemic twin.
Related literature
For the synthesis of 9-(2-carboxy-2-cyanovinyl)julolidine, commonly known as CCVJ, see: Rumble et al. (2012). For a related molecule, see: Liang et al. (2009). For fluorescent-rotor probe studies of CCVJ, see: Sawada et al. (1992); Haidekker et al. (2001). For other applications, see: Iwaki et al. (1993); Haidekker et al. (2002); Tanaka et al. (2008); Hawe et al. (2010); Levitt et al. (2011), Dishari & Hickner (2012); Howell et al. (2012). For a mechanismic study, see: Rumble et al. (2012).
Experimental
Crystal data
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Data collection: SMART (Bruker, 2001); cell SAINT (Bruker, 2001); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).
Supporting information
10.1107/S1600536812043383/ng5301sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536812043383/ng5301Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536812043383/ng5301Isup3.cml
CCVJ was synthesized by reaction of 9-formyljulolidine and cyanoacetic acid as described by Rumble et al. (2012) and purified by silica gel flash
Orange colored crystals were obtained by slow evaporation of its solution in toluene with a small quantity of DMSO added to increase the solubility, at room temperature.Hydrogen atoms were placed in calculated positions with C—H 0.93 and 0.97 Å in a riding-model approximation. The acid hydrogen was located in a difference Fourier map and was freely refined.
The acid is disordered over two positions in respect of the five methylene carbons. The occupancy could not be refined so that the disorder was assumed to be a 1:1 type of disorder. Pairs of 1,2-related C–C distances were restrained to within 0.01 Å of each other, and the temperature factors of the primed atoms were set to those of the unprimed ones. Additionally, the anisotropic temperature factors were tightly restrained to be nearly isotropic.
The
refined on 1096 Friedel pairs, was 0.5, which implied that the crystal studied is a racemic twin that crystallizes in a polar The racemic nature also supported the 1:1 type of disorder.Data collection: SMART (Bruker, 2001); cell
SAINT (Bruker, 2001); data reduction: SAINT (Bruker, 2001); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. Thermal ellipsoid plot (Barbour, 2001) showing 50% probability displacement ellipsoids; the disorder is not shown. |
C16H16N2O2·C2H6OS | F(000) = 368 |
Mr = 346.44 | Dx = 1.298 Mg m−3 |
Monoclinic, P21 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2yb | Cell parameters from 1427 reflections |
a = 10.215 (3) Å | θ = 2.4–26.3° |
b = 7.4588 (19) Å | µ = 0.20 mm−1 |
c = 11.819 (3) Å | T = 298 K |
β = 100.170 (5)° | Pyramid, orange |
V = 886.4 (4) Å3 | 0.20 × 0.16 × 0.15 mm |
Z = 2 |
Bruker SMART APEX CCD area-detector diffractometer | 3443 independent reflections |
Radiation source: fine-focus sealed tube | 2520 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.017 |
ϕ and ω scans | θmax = 28.3°, θmin = 1.8° |
Absorption correction: multi-scan (SADABS; Bruker, 2001) | h = −10→13 |
Tmin = 0.961, Tmax = 0.971 | k = −9→8 |
5962 measured reflections | l = −15→15 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.051 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.146 | w = 1/[σ2(Fo2) + (0.0864P)2] where P = (Fo2 + 2Fc2)/3 |
S = 1.02 | (Δ/σ)max = 0.001 |
3443 reflections | Δρmax = 0.25 e Å−3 |
239 parameters | Δρmin = −0.23 e Å−3 |
45 restraints | Absolute structure: Flack (1983), 1096 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: 0.51 (15) |
C16H16N2O2·C2H6OS | V = 886.4 (4) Å3 |
Mr = 346.44 | Z = 2 |
Monoclinic, P21 | Mo Kα radiation |
a = 10.215 (3) Å | µ = 0.20 mm−1 |
b = 7.4588 (19) Å | T = 298 K |
c = 11.819 (3) Å | 0.20 × 0.16 × 0.15 mm |
β = 100.170 (5)° |
Bruker SMART APEX CCD area-detector diffractometer | 3443 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2001) | 2520 reflections with I > 2σ(I) |
Tmin = 0.961, Tmax = 0.971 | Rint = 0.017 |
5962 measured reflections |
R[F2 > 2σ(F2)] = 0.051 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.146 | Δρmax = 0.25 e Å−3 |
S = 1.02 | Δρmin = −0.23 e Å−3 |
3443 reflections | Absolute structure: Flack (1983), 1096 Friedel pairs |
239 parameters | Absolute structure parameter: 0.51 (15) |
45 restraints |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
S1 | 1.57938 (6) | 0.5022 (3) | 0.08482 (5) | 0.0703 (3) | |
O1 | 1.23541 (15) | 0.4978 (8) | 0.16187 (12) | 0.0620 (5) | |
H1 | 1.301 (3) | 0.535 (6) | 0.134 (3) | 0.082 (11)* | |
O2 | 1.37748 (15) | 0.5038 (7) | 0.32895 (12) | 0.0644 (5) | |
O3 | 1.43031 (17) | 0.5070 (9) | 0.04602 (13) | 0.0831 (7) | |
N1 | 0.80423 (18) | 0.5001 (7) | 0.76083 (14) | 0.0546 (5) | |
N2 | 0.9202 (2) | 0.5020 (10) | 0.19413 (15) | 0.0694 (7) | |
C1 | 0.8895 (2) | 0.5020 (8) | 0.68381 (15) | 0.0433 (5) | |
C2 | 1.0286 (2) | 0.4971 (8) | 0.72132 (16) | 0.0483 (5) | |
C3 | 1.0773 (10) | 0.478 (2) | 0.8505 (5) | 0.057 (2) | 0.50 |
H3A | 1.1499 | 0.3929 | 0.8628 | 0.069* | 0.50 |
H3B | 1.1126 | 0.5931 | 0.8802 | 0.069* | 0.50 |
C4 | 0.9831 (10) | 0.4241 (15) | 0.9135 (7) | 0.0588 (12) | 0.50 |
H4A | 1.0186 | 0.4433 | 0.9943 | 0.071* | 0.50 |
H4B | 0.9694 | 0.2962 | 0.9024 | 0.071* | 0.50 |
C5 | 0.8488 (13) | 0.516 (3) | 0.8856 (6) | 0.061 (2) | 0.50 |
H5A | 0.7857 | 0.4593 | 0.9265 | 0.073* | 0.50 |
H5B | 0.8568 | 0.6416 | 0.9079 | 0.073* | 0.50 |
C6 | 0.6611 (6) | 0.517 (3) | 0.7224 (12) | 0.063 (2) | 0.50 |
H6A | 0.6365 | 0.6430 | 0.7196 | 0.076* | 0.50 |
H6B | 0.6146 | 0.4578 | 0.7767 | 0.076* | 0.50 |
C7 | 0.6201 (10) | 0.4346 (16) | 0.6046 (9) | 0.0591 (13) | 0.50 |
H7A | 0.5245 | 0.4417 | 0.5799 | 0.071* | 0.50 |
H7B | 0.6470 | 0.3099 | 0.6049 | 0.071* | 0.50 |
C8 | 0.6920 (6) | 0.5454 (16) | 0.5261 (10) | 0.0564 (12) | 0.50 |
H8A | 0.6774 | 0.6726 | 0.5359 | 0.068* | 0.50 |
H8B | 0.6619 | 0.5138 | 0.4461 | 0.068* | 0.50 |
C3' | 1.0888 (10) | 0.534 (2) | 0.8468 (5) | 0.057 (2) | 0.50 |
H3'A | 1.1476 | 0.4356 | 0.8752 | 0.069* | 0.50 |
H3'B | 1.1426 | 0.6418 | 0.8502 | 0.069* | 0.50 |
C4' | 0.9974 (9) | 0.5554 (15) | 0.9189 (6) | 0.0588 (12) | 0.50 |
H4'A | 0.9893 | 0.6829 | 0.9321 | 0.071* | 0.50 |
H4'B | 1.0353 | 0.5020 | 0.9922 | 0.071* | 0.50 |
C5' | 0.8576 (13) | 0.481 (3) | 0.8843 (6) | 0.061 (2) | 0.50 |
H5'A | 0.8580 | 0.3550 | 0.9047 | 0.073* | 0.50 |
H5'B | 0.7990 | 0.5427 | 0.9277 | 0.073* | 0.50 |
C6' | 0.6599 (6) | 0.488 (3) | 0.7296 (11) | 0.063 (2) | 0.50 |
H6'A | 0.6197 | 0.5661 | 0.7792 | 0.076* | 0.50 |
H6'B | 0.6327 | 0.3658 | 0.7426 | 0.076* | 0.50 |
C7' | 0.6091 (9) | 0.5376 (16) | 0.6058 (8) | 0.0591 (13) | 0.50 |
H7'A | 0.6101 | 0.6671 | 0.5983 | 0.071* | 0.50 |
H7'B | 0.5176 | 0.4977 | 0.5844 | 0.071* | 0.50 |
C8' | 0.6919 (6) | 0.4551 (16) | 0.5238 (10) | 0.0564 (12) | 0.50 |
H8'A | 0.6790 | 0.3262 | 0.5207 | 0.068* | 0.50 |
H8'B | 0.6633 | 0.5028 | 0.4470 | 0.068* | 0.50 |
C9 | 0.8385 (2) | 0.4974 (10) | 0.56447 (17) | 0.0531 (6) | |
C10 | 0.9249 (2) | 0.4991 (9) | 0.48771 (16) | 0.0521 (6) | |
H10 | 0.8901 | 0.4997 | 0.4095 | 0.062* | |
C11 | 1.06346 (19) | 0.5000 (9) | 0.52212 (15) | 0.0432 (5) | |
C12 | 1.1110 (2) | 0.4975 (9) | 0.64131 (16) | 0.0478 (5) | |
H12 | 1.2024 | 0.4961 | 0.6671 | 0.057* | |
C13 | 1.15899 (19) | 0.4997 (8) | 0.44699 (15) | 0.0441 (5) | |
H13 | 1.2469 | 0.4996 | 0.4849 | 0.053* | |
C14 | 1.14494 (19) | 0.4994 (8) | 0.32993 (15) | 0.0422 (5) | |
C15 | 1.0203 (2) | 0.4995 (9) | 0.25512 (16) | 0.0456 (5) | |
C16 | 1.2650 (2) | 0.5071 (8) | 0.27592 (16) | 0.0446 (5) | |
C17 | 1.6110 (5) | 0.6841 (7) | 0.1863 (4) | 0.0650 (14) | |
H17A | 1.5939 | 0.7962 | 0.1465 | 0.098* | |
H17B | 1.7022 | 0.6802 | 0.2243 | 0.098* | |
H17C | 1.5539 | 0.6728 | 0.2423 | 0.098* | |
C18 | 1.6183 (6) | 0.3239 (8) | 0.1791 (5) | 0.0809 (18) | |
H18A | 1.6065 | 0.2132 | 0.1371 | 0.121* | |
H18B | 1.5608 | 0.3257 | 0.2352 | 0.121* | |
H18C | 1.7091 | 0.3341 | 0.2172 | 0.121* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0427 (3) | 0.1230 (6) | 0.0511 (3) | 0.0016 (10) | 0.0244 (3) | 0.0008 (10) |
O1 | 0.0391 (8) | 0.1122 (15) | 0.0383 (7) | 0.008 (3) | 0.0162 (6) | 0.002 (2) |
O2 | 0.0385 (8) | 0.1109 (14) | 0.0454 (8) | −0.009 (3) | 0.0118 (6) | −0.004 (3) |
O3 | 0.0439 (9) | 0.164 (2) | 0.0435 (8) | −0.004 (3) | 0.0133 (7) | 0.016 (3) |
N1 | 0.0482 (10) | 0.0773 (13) | 0.0434 (9) | −0.007 (3) | 0.0220 (8) | −0.010 (3) |
N2 | 0.0437 (11) | 0.121 (2) | 0.0445 (10) | −0.016 (3) | 0.0112 (8) | 0.008 (3) |
C1 | 0.0485 (11) | 0.0469 (11) | 0.0388 (9) | 0.004 (3) | 0.0192 (8) | 0.002 (3) |
C2 | 0.0487 (12) | 0.0634 (13) | 0.0344 (9) | −0.001 (3) | 0.0120 (8) | 0.004 (3) |
C3 | 0.056 (2) | 0.080 (7) | 0.0357 (11) | −0.017 (4) | 0.0096 (11) | −0.016 (4) |
C4 | 0.075 (3) | 0.072 (3) | 0.0313 (13) | −0.003 (4) | 0.0137 (14) | 0.016 (3) |
C5 | 0.066 (2) | 0.082 (6) | 0.0405 (11) | 0.005 (5) | 0.0258 (11) | −0.013 (3) |
C6 | 0.0490 (13) | 0.082 (5) | 0.0656 (19) | 0.009 (4) | 0.0303 (11) | 0.002 (4) |
C7 | 0.0405 (18) | 0.065 (4) | 0.0741 (18) | 0.005 (4) | 0.0173 (14) | 0.002 (5) |
C8 | 0.0441 (14) | 0.071 (4) | 0.0548 (14) | −0.001 (6) | 0.0105 (11) | −0.014 (6) |
C3' | 0.056 (2) | 0.080 (7) | 0.0357 (11) | −0.017 (4) | 0.0096 (11) | −0.016 (4) |
C4' | 0.075 (3) | 0.072 (3) | 0.0313 (13) | −0.003 (4) | 0.0137 (14) | 0.016 (3) |
C5' | 0.066 (2) | 0.082 (6) | 0.0405 (11) | 0.005 (5) | 0.0258 (11) | −0.013 (3) |
C6' | 0.0490 (13) | 0.082 (5) | 0.0656 (19) | 0.009 (4) | 0.0303 (11) | 0.002 (4) |
C7' | 0.0405 (18) | 0.065 (4) | 0.0741 (18) | 0.005 (4) | 0.0173 (14) | 0.002 (5) |
C8' | 0.0441 (14) | 0.071 (4) | 0.0548 (14) | −0.001 (6) | 0.0105 (11) | −0.014 (6) |
C9 | 0.0401 (11) | 0.0803 (16) | 0.0406 (10) | −0.003 (3) | 0.0118 (9) | −0.014 (3) |
C10 | 0.0436 (11) | 0.0809 (16) | 0.0331 (9) | −0.003 (3) | 0.0107 (8) | 0.016 (3) |
C11 | 0.0419 (11) | 0.0534 (12) | 0.0368 (9) | −0.005 (3) | 0.0134 (8) | 0.009 (2) |
C12 | 0.0394 (10) | 0.0665 (14) | 0.0383 (9) | −0.008 (3) | 0.0092 (8) | 0.006 (3) |
C13 | 0.0383 (10) | 0.0566 (12) | 0.0390 (9) | 0.005 (3) | 0.0110 (8) | 0.003 (3) |
C14 | 0.0365 (10) | 0.0542 (12) | 0.0382 (9) | −0.008 (3) | 0.0128 (7) | 0.003 (3) |
C15 | 0.0395 (11) | 0.0657 (14) | 0.0351 (9) | −0.007 (3) | 0.0164 (8) | 0.004 (3) |
C16 | 0.0391 (11) | 0.0596 (14) | 0.0373 (9) | 0.005 (3) | 0.0130 (8) | 0.005 (3) |
C17 | 0.041 (3) | 0.089 (4) | 0.066 (3) | −0.003 (2) | 0.013 (2) | −0.006 (2) |
C18 | 0.065 (4) | 0.079 (3) | 0.103 (4) | −0.011 (3) | 0.025 (3) | −0.034 (3) |
S1—O3 | 1.5112 (18) | C3'—C4' | 1.380 (7) |
S1—C18 | 1.736 (6) | C3'—H3'A | 0.9700 |
S1—C17 | 1.802 (5) | C3'—H3'B | 0.9700 |
O1—C16 | 1.330 (2) | C4'—C5' | 1.520 (11) |
O1—H1 | 0.85 (3) | C4'—H4'A | 0.9700 |
O2—C16 | 1.208 (2) | C4'—H4'B | 0.9700 |
N1—C1 | 1.366 (2) | C5'—H5'A | 0.9700 |
N1—C6' | 1.458 (6) | C5'—H5'B | 0.9700 |
N1—C6 | 1.458 (6) | C6'—C7' | 1.511 (10) |
N1—C5 | 1.470 (6) | C6'—H6'A | 0.9700 |
N1—C5' | 1.472 (6) | C6'—H6'B | 0.9700 |
N2—C15 | 1.142 (3) | C7'—C8' | 1.525 (6) |
C1—C2 | 1.412 (3) | C7'—H7'A | 0.9700 |
C1—C9 | 1.415 (3) | C7'—H7'B | 0.9700 |
C2—C12 | 1.373 (3) | C8'—C9 | 1.522 (6) |
C2—C3' | 1.527 (6) | C8'—H8'A | 0.9700 |
C2—C3 | 1.527 (6) | C8'—H8'B | 0.9700 |
C3—C4 | 1.377 (7) | C9—C10 | 1.374 (3) |
C3—H3A | 0.9700 | C10—C11 | 1.402 (3) |
C3—H3B | 0.9700 | C10—H10 | 0.9300 |
C4—C5 | 1.518 (11) | C11—C12 | 1.407 (3) |
C4—H4A | 0.9700 | C11—C13 | 1.431 (2) |
C4—H4B | 0.9700 | C12—H12 | 0.9300 |
C5—H5A | 0.9700 | C13—C14 | 1.366 (2) |
C5—H5B | 0.9700 | C13—H13 | 0.9300 |
C6—C7 | 1.513 (10) | C14—C15 | 1.416 (3) |
C6—H6A | 0.9700 | C14—C16 | 1.480 (3) |
C6—H6B | 0.9700 | C17—H17A | 0.9600 |
C7—C8 | 1.525 (7) | C17—H17B | 0.9600 |
C7—H7A | 0.9700 | C17—H17C | 0.9600 |
C7—H7B | 0.9700 | C18—H18A | 0.9600 |
C8—C9 | 1.528 (6) | C18—H18B | 0.9600 |
C8—H8A | 0.9700 | C18—H18C | 0.9600 |
C8—H8B | 0.9700 | ||
O3—S1—C18 | 108.5 (3) | C5'—C4'—H4'A | 107.3 |
O3—S1—C17 | 103.7 (3) | C3'—C4'—H4'B | 107.3 |
C18—S1—C17 | 98.95 (13) | C5'—C4'—H4'B | 107.3 |
C16—O1—H1 | 109 (2) | H4'A—C4'—H4'B | 106.9 |
C1—N1—C6' | 124.5 (6) | N1—C5'—C4' | 113.4 (10) |
C1—N1—C6 | 120.9 (6) | N1—C5'—H5'A | 108.9 |
C1—N1—C5 | 123.1 (6) | C4'—C5'—H5'A | 108.9 |
C6'—N1—C5 | 112.3 (8) | N1—C5'—H5'B | 108.9 |
C6—N1—C5 | 114.9 (8) | C4'—C5'—H5'B | 108.9 |
C1—N1—C5' | 119.6 (6) | H5'A—C5'—H5'B | 107.7 |
C6'—N1—C5' | 115.2 (8) | N1—C6'—C7' | 112.9 (10) |
C6—N1—C5' | 119.5 (8) | N1—C6'—H6'A | 109.0 |
N1—C1—C2 | 120.98 (17) | C7'—C6'—H6'A | 109.0 |
N1—C1—C9 | 119.88 (19) | N1—C6'—H6'B | 109.0 |
C2—C1—C9 | 119.02 (16) | C7'—C6'—H6'B | 109.0 |
C12—C2—C1 | 119.30 (17) | H6'A—C6'—H6'B | 107.8 |
C12—C2—C3' | 118.5 (4) | C6'—C7'—C8' | 112.4 (12) |
C1—C2—C3' | 120.7 (4) | C6'—C7'—H7'A | 109.1 |
C12—C2—C3 | 123.9 (4) | C8'—C7'—H7'A | 109.1 |
C1—C2—C3 | 116.6 (4) | C6'—C7'—H7'B | 109.1 |
C4—C3—C2 | 115.6 (7) | C8'—C7'—H7'B | 109.1 |
C4—C3—H3A | 108.4 | H7'A—C7'—H7'B | 107.8 |
C2—C3—H3A | 108.4 | C9—C8'—C7' | 109.9 (6) |
C4—C3—H3B | 108.4 | C9—C8'—H8'A | 109.7 |
C2—C3—H3B | 108.4 | C7'—C8'—H8'A | 109.7 |
H3A—C3—H3B | 107.4 | C9—C8'—H8'B | 109.7 |
C3—C4—C5 | 116.1 (12) | C7'—C8'—H8'B | 109.7 |
C3—C4—H4A | 108.3 | H8'A—C8'—H8'B | 108.2 |
C5—C4—H4A | 108.3 | C10—C9—C1 | 119.46 (19) |
C3—C4—H4B | 108.3 | C10—C9—C8' | 120.3 (5) |
C5—C4—H4B | 108.3 | C1—C9—C8' | 119.2 (5) |
H4A—C4—H4B | 107.4 | C10—C9—C8 | 120.8 (5) |
N1—C5—C4 | 106.8 (9) | C1—C9—C8 | 117.3 (5) |
N1—C5—H5A | 110.4 | C9—C10—C11 | 122.84 (17) |
C4—C5—H5A | 110.4 | C9—C10—H10 | 118.6 |
N1—C5—H5B | 110.4 | C11—C10—H10 | 118.6 |
C4—C5—H5B | 110.4 | C10—C11—C12 | 116.29 (16) |
H5A—C5—H5B | 108.6 | C10—C11—C13 | 125.74 (17) |
N1—C6—C7 | 110.5 (10) | C12—C11—C13 | 117.96 (18) |
N1—C6—H6A | 109.5 | C2—C12—C11 | 122.99 (19) |
C7—C6—H6A | 109.5 | C2—C12—H12 | 118.5 |
N1—C6—H6B | 109.5 | C11—C12—H12 | 118.5 |
C7—C6—H6B | 109.5 | C14—C13—C11 | 131.90 (19) |
H6A—C6—H6B | 108.1 | C14—C13—H13 | 114.1 |
C6—C7—C8 | 104.7 (13) | C11—C13—H13 | 114.1 |
C6—C7—H7A | 110.8 | C13—C14—C15 | 123.68 (17) |
C8—C7—H7A | 110.8 | C13—C14—C16 | 119.35 (18) |
C6—C7—H7B | 110.8 | C15—C14—C16 | 116.93 (16) |
C8—C7—H7B | 110.8 | N2—C15—C14 | 179.0 (6) |
H7A—C7—H7B | 108.9 | O2—C16—O1 | 123.34 (18) |
C7—C8—C9 | 104.1 (7) | O2—C16—C14 | 124.06 (17) |
C7—C8—H8A | 110.9 | O1—C16—C14 | 112.20 (18) |
C9—C8—H8A | 110.9 | S1—C17—H17A | 109.5 |
C7—C8—H8B | 110.9 | S1—C17—H17B | 109.5 |
C9—C8—H8B | 110.9 | H17A—C17—H17B | 109.5 |
H8A—C8—H8B | 108.9 | S1—C17—H17C | 109.5 |
C4'—C3'—C2 | 114.8 (7) | H17A—C17—H17C | 109.5 |
C4'—C3'—H3'A | 108.6 | H17B—C17—H17C | 109.5 |
C2—C3'—H3'A | 108.6 | S1—C18—H18A | 109.5 |
C4'—C3'—H3'B | 108.6 | S1—C18—H18B | 109.5 |
C2—C3'—H3'B | 108.6 | H18A—C18—H18B | 109.5 |
H3'A—C3'—H3'B | 107.5 | S1—C18—H18C | 109.5 |
C3'—C4'—C5' | 119.9 (9) | H18A—C18—H18C | 109.5 |
C3'—C4'—H4'A | 107.3 | H18B—C18—H18C | 109.5 |
C6'—N1—C1—C2 | −173.9 (13) | C3'—C4'—C5'—N1 | −38 (2) |
C6—N1—C1—C2 | 175.9 (12) | C1—N1—C6'—C7' | −19 (2) |
C5—N1—C1—C2 | 8.1 (14) | C6—N1—C6'—C7' | 51 (6) |
C5'—N1—C1—C2 | −3.9 (13) | C5—N1—C6'—C7' | 159.2 (15) |
C6'—N1—C1—C9 | 2.1 (15) | C5'—N1—C6'—C7' | 170.7 (15) |
C6—N1—C1—C9 | −8.2 (15) | N1—C6'—C7'—C8' | 44 (2) |
C5—N1—C1—C9 | −175.9 (12) | C6'—C7'—C8'—C9 | −51.9 (15) |
C5'—N1—C1—C9 | 172.0 (11) | N1—C1—C9—C10 | −179.9 (6) |
N1—C1—C2—C12 | 179.4 (6) | C2—C1—C9—C10 | −3.9 (10) |
C9—C1—C2—C12 | 3.4 (9) | N1—C1—C9—C8' | −11.4 (11) |
N1—C1—C2—C3' | −14.6 (11) | C2—C1—C9—C8' | 164.6 (7) |
C9—C1—C2—C3' | 169.4 (9) | N1—C1—C9—C8 | 17.6 (10) |
N1—C1—C2—C3 | 3.6 (11) | C2—C1—C9—C8 | −166.4 (7) |
C9—C1—C2—C3 | −172.4 (9) | C7'—C8'—C9—C10 | −155.4 (9) |
C12—C2—C3—C4 | −160.1 (10) | C7'—C8'—C9—C1 | 36.2 (13) |
C1—C2—C3—C4 | 15.5 (16) | C7'—C8'—C9—C8 | −56.6 (13) |
C3'—C2—C3—C4 | 124 (4) | C7—C8—C9—C10 | 149.4 (9) |
C2—C3—C4—C5 | −45.1 (18) | C7—C8—C9—C1 | −48.3 (11) |
C1—N1—C5—C4 | −33.8 (19) | C7—C8—C9—C8' | 52.9 (15) |
C6'—N1—C5—C4 | 148.0 (15) | C1—C9—C10—C11 | 1.9 (10) |
C6—N1—C5—C4 | 157.8 (14) | C8'—C9—C10—C11 | −166.4 (8) |
C5'—N1—C5—C4 | 40 (5) | C8—C9—C10—C11 | 163.8 (7) |
C3—C4—C5—N1 | 52.5 (19) | C9—C10—C11—C12 | 0.5 (9) |
C1—N1—C6—C7 | 32 (2) | C9—C10—C11—C13 | 179.2 (7) |
C6'—N1—C6—C7 | −84 (7) | C1—C2—C12—C11 | −0.9 (9) |
C5—N1—C6—C7 | −159.6 (14) | C3'—C2—C12—C11 | −167.3 (9) |
C5'—N1—C6—C7 | −148.5 (14) | C3—C2—C12—C11 | 174.6 (9) |
N1—C6—C7—C8 | −62.6 (16) | C10—C11—C12—C2 | −1.0 (9) |
C6—C7—C8—C9 | 68.9 (11) | C13—C11—C12—C2 | −179.8 (6) |
C12—C2—C3'—C4' | 171.6 (9) | C10—C11—C13—C14 | 0.4 (10) |
C1—C2—C3'—C4' | 5.5 (15) | C12—C11—C13—C14 | 179.1 (6) |
C3—C2—C3'—C4' | −75 (3) | C11—C13—C14—C15 | 0.0 (10) |
C2—C3'—C4'—C5' | 20.9 (17) | C11—C13—C14—C16 | 177.4 (7) |
C1—N1—C5'—C4' | 28.6 (19) | C13—C14—C16—O2 | 4.2 (10) |
C6'—N1—C5'—C4' | −160.5 (15) | C15—C14—C16—O2 | −178.3 (6) |
C6—N1—C5'—C4' | −151.2 (15) | C13—C14—C16—O1 | 177.2 (6) |
C5—N1—C5'—C4' | −83 (7) | C15—C14—C16—O1 | −5.3 (8) |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···O3 | 0.85 (3) | 1.83 (3) | 2.609 (2) | 153 (4) |
Experimental details
Crystal data | |
Chemical formula | C16H16N2O2·C2H6OS |
Mr | 346.44 |
Crystal system, space group | Monoclinic, P21 |
Temperature (K) | 298 |
a, b, c (Å) | 10.215 (3), 7.4588 (19), 11.819 (3) |
β (°) | 100.170 (5) |
V (Å3) | 886.4 (4) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.20 |
Crystal size (mm) | 0.20 × 0.16 × 0.15 |
Data collection | |
Diffractometer | Bruker SMART APEX CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2001) |
Tmin, Tmax | 0.961, 0.971 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 5962, 3443, 2520 |
Rint | 0.017 |
(sin θ/λ)max (Å−1) | 0.667 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.051, 0.146, 1.02 |
No. of reflections | 3443 |
No. of parameters | 239 |
No. of restraints | 45 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.25, −0.23 |
Absolute structure | Flack (1983), 1096 Friedel pairs |
Absolute structure parameter | 0.51 (15) |
Computer programs: SMART (Bruker, 2001), SAINT (Bruker, 2001), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), X-SEED (Barbour, 2001), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···O3 | 0.85 (3) | 1.83 (3) | 2.609 (2) | 153 (4) |
Acknowledgements
This work was supported by the Division of Chemical Sciences, Geosciences, and Biosciences, Office of Basic Energy Sciences of the US Department of Energy through grant DE–FG02-09ER16118. We also acknowledge NSF funding (CHEM-0131112) for the X-ray diffractometer.
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
9-(2-carboxy-2-cyanovinyl)julolidine, commonly known as CCVJ, is a fluorescent rotor probe (Sawada et al., 1992; Haidekker et al., 2001) whose fluorescence intensity is strongly modulated by the fluidity of its surroundings. As such, it has been used for studying local fluidity in a variety of contexts (Iwaki et al., 1993; Haidekker et al., 2002; Tanaka et al., 2008; Hawe et al., 2010; Levitt et al., 2011; Dishari & Hickner, 2012; Howell et al., 2012). We have recently studied the rotatory mechanism behind CCVJ's environmental sensitivity, which we showed is an excited-state isomerization (Rumble et al., 2012). Herein we report the crystal structure of CCVJ which we determined in support of this photochemical study.