organic compounds
(6′R*,7′R*)-7′-(1,3,-Diphenyl-1H-pyrazol-4-yl)-1,2,5′,6′,7′,7a',3′′,4′′-octahydro-1′H,2′′H-dispiro[acenaphthylene-1,5′-pyrrolo[1,2-c][1,3]thiazole-6′,3′′-[1]benzopyran]-2,4′′-dione
aDepartment of Physics, Sree Krishna College of Engineering, Anicut, Vellore 632 001, India, bIndustrial Chemistry Labratory, Central Leather Research Institute, Adyar, Chennai 600 020, India, cDepartment of Physics, Mahendra Engineering College, Namakkal 637 503, India, and dDepartment of Physics, Thanthai Periyar Government Institute of Technology, Vellore 632 002, India
*Correspondence e-mail: smurugavel27@gmail.com
In the title compound, C40H29N3O3S, the pyran ring adopts a sofa conformation, the thiazolidine ring adopts a twisted conformation and the pyrrolidine ring adopts an with the N atom as the flap. The pyrazole ring is essentially planar [maximum deviation = 0.002 (2) Å] and forms dihedral angles of 4.8 (1) and 39.0 (1)°, respectively, with the benzene rings attached to the N and C atoms. The acenapthylene ring system is approximately planar [maximum deviation = 0.058 (2) Å] and forms dihedral angles of 85.9 (1) and 48.5 (1)°, respectively, with the pyrollothiazole and chromene ring systems. The molecular conformation is stabilized by three weak intramolecular C—H⋯O hydrogen bonds, which generate one S(8) and two S(6) ring motifs. In the crystal, pairs of C—H⋯O hydrogen bonds link centrosymmetrically related molecules into dimers, generating R22(14) ring motifs. The crystal packing also features pairs of C—H⋯π interactions, which link the dimers into a supramolecular chain along the b axis.
Related literature
For the biological properties of spiroheterocycles, see: Kilonda et al. (1995); Ferguson et al. (2005). For ring puckering parameters, see: Cremer & Pople (1975), and for asymmetry parameters, see: Duax et al. (1976). For related structures, see: Wei et al. (2012); Jagadeesan et al. (2013). For hydrogen-bond motifs, see: Bernstein et al. (1995).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2004); cell APEX2 and SAINT (Bruker, 2004); data reduction: SAINT and XPREP (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009).
Supporting information
10.1107/S1600536813005825/tk5201sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536813005825/tk5201Isup2.hkl
A mixture of Acenaphthoquinone (1.0 mmol), thioproline (1.1 mmol) and (E)-2,3-dihydro-3-((1,3-diphenyl-1H-pyrazol-4-yl) methylene)chromen-4-one (1.0 mmol) in ethanol was refluxed for 4h and cooled to room temperature. The solid formed in the reaction mixture was poured into water and filtered, dried, and recrystallized from ethanol to obtain the title compound in good yield (84–91%).
All the H atoms were positioned geometrically with C–H = 0.93–0.98 Å and constrained to ride on their parent atom, with Uiso(H) =1.5Ueq for methyl H atoms and 1.2Ueq(C) for other H atoms.
Data collection: APEX2 (Bruker, 2004); cell
APEX2 and SAINT (Bruker, 2004); data reduction: SAINT and XPREP (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008) and PLATON (Spek, 2009).Fig. 1. The molecular structure of the title compound with the atom numbering scheme. Displacement ellipsoids are drawn at the 30% probability level. H atoms are omitted for the sake of clarity. | |
Fig. 2. Part of the crystal structure of the title compound showing C—H···O intermolecular hydrogen bonds (dotted lines) generating an R22(14) centrosymmetric dimer [Symmetry code: (i) 1-x, 1-y, 1-z]. | |
Fig. 3. Part of the crystal structure of (I), showing the formation of a cyclic centrosymmetric dimer. For the sake of clarity, H atoms not involved in the motif shown have been omitted. Cg denotes centroid of the C23–C28 benzene ring. [Symmetry code: (ii) 1-x, -y, 1-z]. |
C40H29N3O3S | Z = 2 |
Mr = 631.72 | F(000) = 660 |
Triclinic, P1 | Dx = 1.364 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 9.9924 (6) Å | Cell parameters from 9836 reflections |
b = 13.2317 (8) Å | θ = 1.8–31.0° |
c = 13.2867 (8) Å | µ = 0.15 mm−1 |
α = 116.900 (3)° | T = 293 K |
β = 92.325 (2)° | Block, colourless |
γ = 98.518 (3)° | 0.23 × 0.21 × 0.16 mm |
V = 1537.79 (16) Å3 |
Bruker APEXII CCD diffractometer | 9612 independent reflections |
Radiation source: fine-focus sealed tube | 6569 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.029 |
Detector resolution: 10.0 pixels mm-1 | θmax = 31.0°, θmin = 1.8° |
ω scans | h = −14→14 |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | k = −18→19 |
Tmin = 0.966, Tmax = 0.976 | l = −19→17 |
36242 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.049 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.154 | H-atom parameters constrained |
S = 1.03 | w = 1/[σ2(Fo2) + (0.0749P)2 + 0.3833P] where P = (Fo2 + 2Fc2)/3 |
9612 reflections | (Δ/σ)max < 0.001 |
424 parameters | Δρmax = 0.35 e Å−3 |
0 restraints | Δρmin = −0.23 e Å−3 |
C40H29N3O3S | γ = 98.518 (3)° |
Mr = 631.72 | V = 1537.79 (16) Å3 |
Triclinic, P1 | Z = 2 |
a = 9.9924 (6) Å | Mo Kα radiation |
b = 13.2317 (8) Å | µ = 0.15 mm−1 |
c = 13.2867 (8) Å | T = 293 K |
α = 116.900 (3)° | 0.23 × 0.21 × 0.16 mm |
β = 92.325 (2)° |
Bruker APEXII CCD diffractometer | 9612 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 6569 reflections with I > 2σ(I) |
Tmin = 0.966, Tmax = 0.976 | Rint = 0.029 |
36242 measured reflections |
R[F2 > 2σ(F2)] = 0.049 | 0 restraints |
wR(F2) = 0.154 | H-atom parameters constrained |
S = 1.03 | Δρmax = 0.35 e Å−3 |
9612 reflections | Δρmin = −0.23 e Å−3 |
424 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.7455 (3) | −0.28167 (19) | 0.25650 (18) | 0.0819 (8) | |
H1 | 0.7796 | −0.2454 | 0.3331 | 0.098* | |
C2 | 0.7608 (4) | −0.3935 (2) | 0.1866 (2) | 0.1099 (13) | |
H2 | 0.8045 | −0.4326 | 0.2171 | 0.132* | |
C3 | 0.7129 (3) | −0.44716 (19) | 0.07414 (19) | 0.0747 (7) | |
H3 | 0.7228 | −0.5228 | 0.0282 | 0.090* | |
C4 | 0.6509 (2) | −0.38972 (17) | 0.02968 (17) | 0.0604 (5) | |
H4 | 0.6194 | −0.4254 | −0.0475 | 0.073* | |
C5 | 0.6343 (2) | −0.27878 (16) | 0.09814 (16) | 0.0555 (5) | |
H5 | 0.5917 | −0.2397 | 0.0669 | 0.067* | |
C6 | 0.67997 (16) | −0.22511 (13) | 0.21208 (13) | 0.0384 (3) | |
C7 | 0.61357 (16) | −0.03814 (13) | 0.25043 (13) | 0.0381 (3) | |
H7 | 0.5798 | −0.0559 | 0.1769 | 0.046* | |
C8 | 0.62107 (14) | 0.06520 (12) | 0.34519 (12) | 0.0333 (3) | |
C9 | 0.67850 (15) | 0.04757 (12) | 0.43425 (13) | 0.0344 (3) | |
C10 | 0.71557 (16) | 0.12760 (13) | 0.55610 (13) | 0.0375 (3) | |
C11 | 0.63355 (19) | 0.20395 (16) | 0.61809 (15) | 0.0480 (4) | |
H11 | 0.5529 | 0.2062 | 0.5823 | 0.058* | |
C12 | 0.6707 (3) | 0.27680 (19) | 0.73271 (18) | 0.0653 (6) | |
H12 | 0.6154 | 0.3283 | 0.7736 | 0.078* | |
C13 | 0.7883 (3) | 0.2736 (2) | 0.78628 (18) | 0.0743 (7) | |
H13 | 0.8125 | 0.3224 | 0.8636 | 0.089* | |
C14 | 0.8713 (2) | 0.1981 (2) | 0.72601 (18) | 0.0662 (6) | |
H14 | 0.9517 | 0.1964 | 0.7625 | 0.079* | |
C15 | 0.83462 (19) | 0.12508 (16) | 0.61162 (15) | 0.0484 (4) | |
H15 | 0.8902 | 0.0737 | 0.5713 | 0.058* | |
C16 | 0.59016 (14) | 0.17413 (12) | 0.34794 (12) | 0.0313 (3) | |
H16 | 0.6368 | 0.2390 | 0.4192 | 0.038* | |
C17 | 0.64407 (14) | 0.19223 (12) | 0.24940 (12) | 0.0318 (3) | |
H17 | 0.6380 | 0.1176 | 0.1819 | 0.038* | |
C18 | 0.78268 (15) | 0.26687 (14) | 0.26813 (15) | 0.0417 (3) | |
H18A | 0.8548 | 0.2226 | 0.2576 | 0.050* | |
H18B | 0.7996 | 0.3319 | 0.3439 | 0.050* | |
C19 | 0.58590 (16) | 0.27596 (14) | 0.13448 (14) | 0.0397 (3) | |
H19A | 0.5457 | 0.3379 | 0.1335 | 0.048* | |
H19B | 0.5561 | 0.2066 | 0.0630 | 0.048* | |
C20 | 0.41210 (13) | 0.20580 (11) | 0.23217 (11) | 0.0293 (3) | |
C21 | 0.43588 (13) | 0.18533 (11) | 0.33985 (11) | 0.0292 (3) | |
C22 | 0.41078 (15) | 0.29222 (12) | 0.44361 (12) | 0.0336 (3) | |
C23 | 0.26783 (15) | 0.29257 (13) | 0.46627 (13) | 0.0369 (3) | |
C24 | 0.22855 (18) | 0.39297 (16) | 0.54484 (15) | 0.0468 (4) | |
H24 | 0.2941 | 0.4591 | 0.5867 | 0.056* | |
C25 | 0.0938 (2) | 0.39515 (19) | 0.56108 (17) | 0.0552 (5) | |
H25 | 0.0679 | 0.4626 | 0.6130 | 0.066* | |
C26 | −0.00309 (19) | 0.29610 (19) | 0.49947 (18) | 0.0568 (5) | |
H26 | −0.0941 | 0.2974 | 0.5111 | 0.068* | |
C27 | 0.03255 (17) | 0.19627 (17) | 0.42169 (17) | 0.0497 (4) | |
H27 | −0.0336 | 0.1302 | 0.3811 | 0.060* | |
C28 | 0.16822 (16) | 0.19455 (14) | 0.40403 (13) | 0.0379 (3) | |
C29 | 0.33824 (15) | 0.08335 (13) | 0.33603 (13) | 0.0359 (3) | |
H29A | 0.3530 | 0.0127 | 0.2729 | 0.043* | |
H29B | 0.3570 | 0.0782 | 0.4056 | 0.043* | |
C30 | 0.35466 (15) | 0.08938 (12) | 0.12151 (12) | 0.0337 (3) | |
C31 | 0.23951 (15) | 0.10870 (13) | 0.06378 (12) | 0.0359 (3) | |
C32 | 0.15924 (17) | 0.04013 (16) | −0.03783 (14) | 0.0480 (4) | |
H32 | 0.1705 | −0.0352 | −0.0832 | 0.058* | |
C33 | 0.05936 (18) | 0.0870 (2) | −0.07148 (16) | 0.0577 (5) | |
H33 | 0.0040 | 0.0415 | −0.1402 | 0.069* | |
C34 | 0.04146 (18) | 0.19750 (19) | −0.00610 (16) | 0.0544 (5) | |
H34 | −0.0259 | 0.2252 | −0.0313 | 0.065* | |
C35 | 0.12287 (15) | 0.27082 (16) | 0.09887 (14) | 0.0420 (3) | |
C36 | 0.22067 (14) | 0.22160 (13) | 0.13097 (12) | 0.0333 (3) | |
C37 | 0.31473 (14) | 0.28286 (12) | 0.22961 (12) | 0.0312 (3) | |
C38 | 0.31458 (16) | 0.39697 (13) | 0.29630 (14) | 0.0383 (3) | |
H38 | 0.3788 | 0.4407 | 0.3600 | 0.046* | |
C39 | 0.21453 (18) | 0.44768 (15) | 0.26665 (16) | 0.0457 (4) | |
H39 | 0.2123 | 0.5249 | 0.3135 | 0.055* | |
C40 | 0.12157 (17) | 0.38762 (17) | 0.17216 (16) | 0.0486 (4) | |
H40 | 0.0571 | 0.4239 | 0.1560 | 0.058* | |
N1 | 0.66387 (13) | −0.11021 (11) | 0.28216 (11) | 0.0369 (3) | |
N2 | 0.70462 (14) | −0.05886 (11) | 0.39516 (11) | 0.0390 (3) | |
N3 | 0.55049 (11) | 0.25684 (10) | 0.22935 (10) | 0.0310 (2) | |
O1 | 0.50184 (12) | 0.37240 (10) | 0.50186 (11) | 0.0498 (3) | |
O2 | 0.19856 (11) | 0.09458 (9) | 0.32322 (10) | 0.0406 (2) | |
O3 | 0.40291 (12) | 0.00307 (9) | 0.09023 (10) | 0.0457 (3) | |
S1 | 0.77092 (4) | 0.31491 (4) | 0.16018 (4) | 0.04985 (13) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.152 (2) | 0.0546 (12) | 0.0414 (10) | 0.0537 (14) | −0.0089 (12) | 0.0153 (9) |
C2 | 0.211 (4) | 0.0627 (15) | 0.0592 (14) | 0.080 (2) | −0.0104 (18) | 0.0172 (12) |
C3 | 0.126 (2) | 0.0436 (11) | 0.0538 (12) | 0.0389 (13) | 0.0121 (13) | 0.0153 (9) |
C4 | 0.0898 (15) | 0.0462 (10) | 0.0399 (9) | 0.0178 (10) | 0.0044 (9) | 0.0140 (8) |
C5 | 0.0823 (13) | 0.0433 (9) | 0.0416 (9) | 0.0211 (9) | −0.0033 (9) | 0.0183 (8) |
C6 | 0.0496 (8) | 0.0318 (7) | 0.0376 (8) | 0.0125 (6) | 0.0057 (6) | 0.0180 (6) |
C7 | 0.0498 (8) | 0.0337 (7) | 0.0358 (7) | 0.0139 (6) | 0.0003 (6) | 0.0190 (6) |
C8 | 0.0368 (7) | 0.0312 (7) | 0.0355 (7) | 0.0088 (5) | 0.0015 (6) | 0.0182 (6) |
C9 | 0.0383 (7) | 0.0330 (7) | 0.0355 (7) | 0.0075 (6) | 0.0022 (6) | 0.0187 (6) |
C10 | 0.0471 (8) | 0.0343 (7) | 0.0334 (7) | 0.0041 (6) | 0.0015 (6) | 0.0190 (6) |
C11 | 0.0570 (10) | 0.0475 (10) | 0.0412 (9) | 0.0133 (8) | 0.0085 (7) | 0.0208 (8) |
C12 | 0.0896 (16) | 0.0537 (12) | 0.0460 (11) | 0.0201 (11) | 0.0176 (10) | 0.0148 (9) |
C13 | 0.1030 (19) | 0.0669 (14) | 0.0358 (10) | 0.0085 (13) | −0.0045 (11) | 0.0123 (9) |
C14 | 0.0740 (14) | 0.0706 (14) | 0.0471 (11) | 0.0046 (11) | −0.0158 (10) | 0.0260 (10) |
C15 | 0.0543 (10) | 0.0492 (10) | 0.0428 (9) | 0.0081 (8) | −0.0027 (7) | 0.0235 (8) |
C16 | 0.0341 (6) | 0.0274 (6) | 0.0327 (7) | 0.0073 (5) | −0.0009 (5) | 0.0141 (5) |
C17 | 0.0321 (6) | 0.0286 (7) | 0.0363 (7) | 0.0086 (5) | 0.0020 (5) | 0.0158 (6) |
C18 | 0.0334 (7) | 0.0420 (8) | 0.0537 (9) | 0.0075 (6) | 0.0011 (6) | 0.0259 (8) |
C19 | 0.0414 (8) | 0.0434 (8) | 0.0426 (8) | 0.0094 (6) | 0.0050 (6) | 0.0266 (7) |
C20 | 0.0321 (6) | 0.0250 (6) | 0.0287 (6) | 0.0057 (5) | −0.0002 (5) | 0.0110 (5) |
C21 | 0.0325 (6) | 0.0257 (6) | 0.0277 (6) | 0.0050 (5) | 0.0006 (5) | 0.0112 (5) |
C22 | 0.0374 (7) | 0.0303 (7) | 0.0304 (7) | 0.0063 (5) | 0.0002 (5) | 0.0122 (6) |
C23 | 0.0396 (7) | 0.0396 (8) | 0.0316 (7) | 0.0106 (6) | 0.0044 (6) | 0.0157 (6) |
C24 | 0.0504 (9) | 0.0471 (9) | 0.0378 (8) | 0.0150 (7) | 0.0077 (7) | 0.0134 (7) |
C25 | 0.0575 (11) | 0.0624 (12) | 0.0496 (10) | 0.0270 (9) | 0.0185 (8) | 0.0237 (9) |
C26 | 0.0447 (9) | 0.0748 (14) | 0.0627 (12) | 0.0223 (9) | 0.0165 (9) | 0.0381 (11) |
C27 | 0.0387 (8) | 0.0585 (11) | 0.0556 (10) | 0.0057 (7) | 0.0047 (7) | 0.0308 (9) |
C28 | 0.0403 (7) | 0.0414 (8) | 0.0355 (7) | 0.0080 (6) | 0.0046 (6) | 0.0208 (6) |
C29 | 0.0379 (7) | 0.0303 (7) | 0.0393 (8) | 0.0032 (6) | 0.0016 (6) | 0.0173 (6) |
C30 | 0.0372 (7) | 0.0302 (7) | 0.0298 (7) | 0.0057 (5) | 0.0026 (5) | 0.0109 (5) |
C31 | 0.0335 (7) | 0.0392 (8) | 0.0300 (7) | 0.0045 (6) | 0.0007 (5) | 0.0128 (6) |
C32 | 0.0423 (8) | 0.0525 (10) | 0.0334 (8) | 0.0025 (7) | −0.0013 (6) | 0.0089 (7) |
C33 | 0.0423 (9) | 0.0805 (14) | 0.0376 (9) | 0.0048 (9) | −0.0103 (7) | 0.0197 (9) |
C34 | 0.0414 (9) | 0.0811 (14) | 0.0444 (9) | 0.0182 (9) | −0.0022 (7) | 0.0308 (10) |
C35 | 0.0338 (7) | 0.0574 (10) | 0.0401 (8) | 0.0129 (7) | 0.0037 (6) | 0.0260 (8) |
C36 | 0.0306 (6) | 0.0391 (8) | 0.0311 (7) | 0.0068 (5) | 0.0029 (5) | 0.0171 (6) |
C37 | 0.0326 (6) | 0.0304 (7) | 0.0314 (7) | 0.0078 (5) | 0.0021 (5) | 0.0147 (5) |
C38 | 0.0421 (8) | 0.0317 (7) | 0.0394 (8) | 0.0087 (6) | 0.0014 (6) | 0.0146 (6) |
C39 | 0.0515 (9) | 0.0387 (8) | 0.0526 (10) | 0.0199 (7) | 0.0111 (8) | 0.0224 (7) |
C40 | 0.0441 (8) | 0.0592 (11) | 0.0570 (10) | 0.0251 (8) | 0.0100 (8) | 0.0345 (9) |
N1 | 0.0489 (7) | 0.0314 (6) | 0.0330 (6) | 0.0123 (5) | 0.0004 (5) | 0.0162 (5) |
N2 | 0.0503 (7) | 0.0354 (7) | 0.0342 (6) | 0.0102 (6) | −0.0011 (5) | 0.0184 (5) |
N3 | 0.0308 (5) | 0.0304 (6) | 0.0353 (6) | 0.0070 (4) | 0.0014 (5) | 0.0181 (5) |
O1 | 0.0443 (6) | 0.0350 (6) | 0.0480 (7) | 0.0035 (5) | −0.0053 (5) | 0.0022 (5) |
O2 | 0.0367 (5) | 0.0355 (6) | 0.0428 (6) | 0.0005 (4) | 0.0004 (4) | 0.0145 (5) |
O3 | 0.0548 (7) | 0.0309 (5) | 0.0429 (6) | 0.0133 (5) | 0.0006 (5) | 0.0086 (5) |
S1 | 0.0412 (2) | 0.0578 (3) | 0.0645 (3) | 0.00799 (19) | 0.01113 (19) | 0.0404 (2) |
C1—C6 | 1.360 (2) | C20—N3 | 1.4561 (17) |
C1—C2 | 1.382 (3) | C20—C37 | 1.5199 (18) |
C1—H1 | 0.9300 | C20—C30 | 1.5762 (19) |
C2—C3 | 1.359 (3) | C20—C21 | 1.5871 (18) |
C2—H2 | 0.9300 | C21—C29 | 1.5229 (19) |
C3—C4 | 1.352 (3) | C21—C22 | 1.5273 (19) |
C3—H3 | 0.9300 | C22—O1 | 1.2109 (18) |
C4—C5 | 1.373 (3) | C22—C23 | 1.472 (2) |
C4—H4 | 0.9300 | C23—C28 | 1.392 (2) |
C5—C6 | 1.371 (2) | C23—C24 | 1.393 (2) |
C5—H5 | 0.9300 | C24—C25 | 1.375 (3) |
C6—N1 | 1.4171 (19) | C24—H24 | 0.9300 |
C7—N1 | 1.3522 (17) | C25—C26 | 1.383 (3) |
C7—C8 | 1.366 (2) | C25—H25 | 0.9300 |
C7—H7 | 0.9300 | C26—C27 | 1.369 (3) |
C8—C9 | 1.4207 (19) | C26—H26 | 0.9300 |
C8—C16 | 1.5031 (18) | C27—C28 | 1.387 (2) |
C9—N2 | 1.3337 (19) | C27—H27 | 0.9300 |
C9—C10 | 1.471 (2) | C28—O2 | 1.3619 (19) |
C10—C11 | 1.385 (2) | C29—O2 | 1.4367 (18) |
C10—C15 | 1.387 (2) | C29—H29A | 0.9700 |
C11—C12 | 1.381 (3) | C29—H29B | 0.9700 |
C11—H11 | 0.9300 | C30—O3 | 1.2080 (17) |
C12—C13 | 1.365 (3) | C30—C31 | 1.473 (2) |
C12—H12 | 0.9300 | C31—C32 | 1.370 (2) |
C13—C14 | 1.379 (3) | C31—C36 | 1.398 (2) |
C13—H13 | 0.9300 | C32—C33 | 1.407 (3) |
C14—C15 | 1.378 (3) | C32—H32 | 0.9300 |
C14—H14 | 0.9300 | C33—C34 | 1.365 (3) |
C15—H15 | 0.9300 | C33—H33 | 0.9300 |
C16—C17 | 1.5377 (19) | C34—C35 | 1.414 (2) |
C16—C21 | 1.5744 (18) | C34—H34 | 0.9300 |
C16—H16 | 0.9800 | C35—C36 | 1.403 (2) |
C17—N3 | 1.4488 (16) | C35—C40 | 1.408 (3) |
C17—C18 | 1.517 (2) | C36—C37 | 1.404 (2) |
C17—H17 | 0.9800 | C37—C38 | 1.362 (2) |
C18—S1 | 1.8190 (17) | C38—C39 | 1.418 (2) |
C18—H18A | 0.9700 | C38—H38 | 0.9300 |
C18—H18B | 0.9700 | C39—C40 | 1.362 (3) |
C19—N3 | 1.4410 (19) | C39—H39 | 0.9300 |
C19—S1 | 1.8187 (16) | C40—H40 | 0.9300 |
C19—H19A | 0.9700 | N1—N2 | 1.3516 (18) |
C19—H19B | 0.9700 | ||
C6—C1—C2 | 119.36 (19) | C29—C21—C22 | 106.27 (11) |
C6—C1—H1 | 120.3 | C29—C21—C16 | 113.43 (11) |
C2—C1—H1 | 120.3 | C22—C21—C16 | 110.40 (11) |
C3—C2—C1 | 121.0 (2) | C29—C21—C20 | 114.27 (11) |
C3—C2—H2 | 119.5 | C22—C21—C20 | 107.39 (10) |
C1—C2—H2 | 119.5 | C16—C21—C20 | 104.98 (10) |
C4—C3—C2 | 119.44 (19) | O1—C22—C23 | 122.22 (14) |
C4—C3—H3 | 120.3 | O1—C22—C21 | 122.30 (13) |
C2—C3—H3 | 120.3 | C23—C22—C21 | 115.47 (12) |
C3—C4—C5 | 120.17 (19) | C28—C23—C24 | 118.87 (15) |
C3—C4—H4 | 119.9 | C28—C23—C22 | 120.37 (14) |
C5—C4—H4 | 119.9 | C24—C23—C22 | 120.62 (14) |
C6—C5—C4 | 120.58 (16) | C25—C24—C23 | 120.63 (18) |
C6—C5—H5 | 119.7 | C25—C24—H24 | 119.7 |
C4—C5—H5 | 119.7 | C23—C24—H24 | 119.7 |
C1—C6—C5 | 119.36 (16) | C24—C25—C26 | 119.41 (18) |
C1—C6—N1 | 120.22 (15) | C24—C25—H25 | 120.3 |
C5—C6—N1 | 120.37 (14) | C26—C25—H25 | 120.3 |
N1—C7—C8 | 108.02 (13) | C27—C26—C25 | 121.22 (17) |
N1—C7—H7 | 126.0 | C27—C26—H26 | 119.4 |
C8—C7—H7 | 126.0 | C25—C26—H26 | 119.4 |
C7—C8—C9 | 103.96 (12) | C26—C27—C28 | 119.37 (17) |
C7—C8—C16 | 126.20 (13) | C26—C27—H27 | 120.3 |
C9—C8—C16 | 129.46 (13) | C28—C27—H27 | 120.3 |
N2—C9—C8 | 111.39 (13) | O2—C28—C27 | 117.43 (15) |
N2—C9—C10 | 118.23 (13) | O2—C28—C23 | 122.08 (13) |
C8—C9—C10 | 130.34 (13) | C27—C28—C23 | 120.48 (16) |
C11—C10—C15 | 118.73 (16) | O2—C29—C21 | 111.51 (11) |
C11—C10—C9 | 122.01 (15) | O2—C29—H29A | 109.3 |
C15—C10—C9 | 119.25 (15) | C21—C29—H29A | 109.3 |
C12—C11—C10 | 120.43 (18) | O2—C29—H29B | 109.3 |
C12—C11—H11 | 119.8 | C21—C29—H29B | 109.3 |
C10—C11—H11 | 119.8 | H29A—C29—H29B | 108.0 |
C13—C12—C11 | 120.2 (2) | O3—C30—C31 | 127.91 (14) |
C13—C12—H12 | 119.9 | O3—C30—C20 | 124.41 (13) |
C11—C12—H12 | 119.9 | C31—C30—C20 | 107.62 (11) |
C12—C13—C14 | 120.2 (2) | C32—C31—C36 | 120.07 (14) |
C12—C13—H13 | 119.9 | C32—C31—C30 | 132.19 (15) |
C14—C13—H13 | 119.9 | C36—C31—C30 | 107.71 (12) |
C15—C14—C13 | 119.8 (2) | C31—C32—C33 | 118.07 (17) |
C15—C14—H14 | 120.1 | C31—C32—H32 | 121.0 |
C13—C14—H14 | 120.1 | C33—C32—H32 | 121.0 |
C14—C15—C10 | 120.59 (19) | C34—C33—C32 | 121.84 (16) |
C14—C15—H15 | 119.7 | C34—C33—H33 | 119.1 |
C10—C15—H15 | 119.7 | C32—C33—H33 | 119.1 |
C8—C16—C17 | 111.83 (11) | C33—C34—C35 | 121.61 (16) |
C8—C16—C21 | 117.44 (11) | C33—C34—H34 | 119.2 |
C17—C16—C21 | 104.14 (10) | C35—C34—H34 | 119.2 |
C8—C16—H16 | 107.7 | C36—C35—C40 | 116.42 (15) |
C17—C16—H16 | 107.7 | C36—C35—C34 | 115.40 (16) |
C21—C16—H16 | 107.7 | C40—C35—C34 | 128.12 (15) |
N3—C17—C18 | 103.38 (11) | C31—C36—C35 | 123.00 (14) |
N3—C17—C16 | 103.13 (11) | C31—C36—C37 | 113.46 (12) |
C18—C17—C16 | 119.69 (12) | C35—C36—C37 | 123.41 (14) |
N3—C17—H17 | 110.0 | C38—C37—C36 | 118.75 (13) |
C18—C17—H17 | 110.0 | C38—C37—C20 | 131.74 (13) |
C16—C17—H17 | 110.0 | C36—C37—C20 | 109.06 (12) |
C17—C18—S1 | 103.54 (10) | C37—C38—C39 | 118.62 (15) |
C17—C18—H18A | 111.1 | C37—C38—H38 | 120.7 |
S1—C18—H18A | 111.1 | C39—C38—H38 | 120.7 |
C17—C18—H18B | 111.1 | C40—C39—C38 | 122.53 (15) |
S1—C18—H18B | 111.1 | C40—C39—H39 | 118.7 |
H18A—C18—H18B | 109.0 | C38—C39—H39 | 118.7 |
N3—C19—S1 | 103.29 (10) | C39—C40—C35 | 120.16 (14) |
N3—C19—H19A | 111.1 | C39—C40—H40 | 119.9 |
S1—C19—H19A | 111.1 | C35—C40—H40 | 119.9 |
N3—C19—H19B | 111.1 | N2—N1—C7 | 111.75 (12) |
S1—C19—H19B | 111.1 | N2—N1—C6 | 120.28 (11) |
H19A—C19—H19B | 109.1 | C7—N1—C6 | 127.95 (13) |
N3—C20—C37 | 109.51 (11) | C9—N2—N1 | 104.88 (11) |
N3—C20—C30 | 113.12 (11) | C19—N3—C17 | 109.17 (11) |
C37—C20—C30 | 102.09 (11) | C19—N3—C20 | 121.01 (11) |
N3—C20—C21 | 99.91 (10) | C17—N3—C20 | 108.75 (10) |
C37—C20—C21 | 120.89 (11) | C28—O2—C29 | 114.31 (12) |
C30—C20—C21 | 111.76 (10) | C19—S1—C18 | 93.45 (7) |
C6—C1—C2—C3 | 0.8 (5) | C22—C23—C28—C27 | −177.10 (14) |
C1—C2—C3—C4 | 0.8 (5) | C22—C21—C29—O2 | 61.29 (14) |
C2—C3—C4—C5 | −1.2 (4) | C16—C21—C29—O2 | −177.24 (11) |
C3—C4—C5—C6 | −0.1 (4) | C20—C21—C29—O2 | −56.95 (16) |
C2—C1—C6—C5 | −2.1 (4) | N3—C20—C30—O3 | 62.38 (18) |
C2—C1—C6—N1 | −179.7 (3) | C37—C20—C30—O3 | 179.95 (14) |
C4—C5—C6—C1 | 1.8 (3) | C21—C20—C30—O3 | −49.46 (19) |
C4—C5—C6—N1 | 179.35 (18) | N3—C20—C30—C31 | −114.91 (12) |
N1—C7—C8—C9 | −0.38 (17) | C37—C20—C30—C31 | 2.65 (14) |
N1—C7—C8—C16 | 173.16 (14) | C21—C20—C30—C31 | 133.25 (12) |
C7—C8—C9—N2 | 0.50 (17) | O3—C30—C31—C32 | −1.8 (3) |
C16—C8—C9—N2 | −172.75 (14) | C20—C30—C31—C32 | 175.39 (17) |
C7—C8—C9—C10 | 178.08 (15) | O3—C30—C31—C36 | −179.50 (15) |
C16—C8—C9—C10 | 4.8 (3) | C20—C30—C31—C36 | −2.33 (16) |
N2—C9—C10—C11 | −141.17 (16) | C36—C31—C32—C33 | 0.2 (2) |
C8—C9—C10—C11 | 41.4 (2) | C30—C31—C32—C33 | −177.25 (17) |
N2—C9—C10—C15 | 37.3 (2) | C31—C32—C33—C34 | 0.1 (3) |
C8—C9—C10—C15 | −140.12 (17) | C32—C33—C34—C35 | 0.2 (3) |
C15—C10—C11—C12 | 0.6 (3) | C33—C34—C35—C36 | −0.8 (3) |
C9—C10—C11—C12 | 179.15 (17) | C33—C34—C35—C40 | 176.27 (18) |
C10—C11—C12—C13 | −0.5 (3) | C32—C31—C36—C35 | −0.9 (2) |
C11—C12—C13—C14 | 0.5 (4) | C30—C31—C36—C35 | 177.11 (14) |
C12—C13—C14—C15 | −0.5 (4) | C32—C31—C36—C37 | −177.03 (14) |
C13—C14—C15—C10 | 0.7 (3) | C30—C31—C36—C37 | 1.02 (17) |
C11—C10—C15—C14 | −0.7 (3) | C40—C35—C36—C31 | −176.26 (15) |
C9—C10—C15—C14 | −179.25 (17) | C34—C35—C36—C31 | 1.2 (2) |
C7—C8—C16—C17 | −40.1 (2) | C40—C35—C36—C37 | −0.6 (2) |
C9—C8—C16—C17 | 131.79 (16) | C34—C35—C36—C37 | 176.91 (15) |
C7—C8—C16—C21 | 80.22 (19) | C31—C36—C37—C38 | 173.97 (13) |
C9—C8—C16—C21 | −107.91 (17) | C35—C36—C37—C38 | −2.1 (2) |
C8—C16—C17—N3 | 151.11 (11) | C31—C36—C37—C20 | 0.79 (17) |
C21—C16—C17—N3 | 23.32 (13) | C35—C36—C37—C20 | −175.29 (13) |
C8—C16—C17—C18 | −94.90 (15) | N3—C20—C37—C38 | −53.9 (2) |
C21—C16—C17—C18 | 137.31 (12) | C30—C20—C37—C38 | −174.06 (15) |
N3—C17—C18—S1 | −41.84 (13) | C21—C20—C37—C38 | 61.2 (2) |
C16—C17—C18—S1 | −155.70 (10) | N3—C20—C37—C36 | 118.04 (12) |
C8—C16—C21—C29 | 2.85 (17) | C30—C20—C37—C36 | −2.08 (14) |
C17—C16—C21—C29 | 127.10 (12) | C21—C20—C37—C36 | −126.82 (13) |
C8—C16—C21—C22 | 121.98 (13) | C36—C37—C38—C39 | 3.4 (2) |
C17—C16—C21—C22 | −113.77 (12) | C20—C37—C38—C39 | 174.72 (14) |
C8—C16—C21—C20 | −122.58 (13) | C37—C38—C39—C40 | −2.2 (3) |
C17—C16—C21—C20 | 1.67 (13) | C38—C39—C40—C35 | −0.5 (3) |
N3—C20—C21—C29 | −150.53 (11) | C36—C35—C40—C39 | 1.8 (2) |
C37—C20—C21—C29 | 89.50 (15) | C34—C35—C40—C39 | −175.25 (18) |
C30—C20—C21—C29 | −30.60 (15) | C8—C7—N1—N2 | 0.16 (18) |
N3—C20—C21—C22 | 91.87 (12) | C8—C7—N1—C6 | −177.99 (15) |
C37—C20—C21—C22 | −28.09 (16) | C1—C6—N1—N2 | −4.8 (3) |
C30—C20—C21—C22 | −148.19 (11) | C5—C6—N1—N2 | 177.67 (16) |
N3—C20—C21—C16 | −25.63 (12) | C1—C6—N1—C7 | 173.2 (2) |
C37—C20—C21—C16 | −145.60 (12) | C5—C6—N1—C7 | −4.3 (3) |
C30—C20—C21—C16 | 94.30 (12) | C8—C9—N2—N1 | −0.41 (17) |
C29—C21—C22—O1 | 144.48 (15) | C10—C9—N2—N1 | −178.31 (13) |
C16—C21—C22—O1 | 21.09 (19) | C7—N1—N2—C9 | 0.16 (17) |
C20—C21—C22—O1 | −92.82 (16) | C6—N1—N2—C9 | 178.47 (13) |
C29—C21—C22—C23 | −37.07 (15) | S1—C19—N3—C17 | −42.78 (13) |
C16—C21—C22—C23 | −160.46 (12) | S1—C19—N3—C20 | −170.07 (10) |
C20—C21—C22—C23 | 85.62 (14) | C18—C17—N3—C19 | 57.10 (15) |
O1—C22—C23—C28 | −173.95 (15) | C16—C17—N3—C19 | −177.57 (12) |
C21—C22—C23—C28 | 7.6 (2) | C18—C17—N3—C20 | −168.95 (12) |
O1—C22—C23—C24 | 10.3 (2) | C16—C17—N3—C20 | −43.62 (14) |
C21—C22—C23—C24 | −168.12 (14) | C37—C20—N3—C19 | −61.20 (16) |
C28—C23—C24—C25 | 0.3 (3) | C30—C20—N3—C19 | 51.93 (16) |
C22—C23—C24—C25 | 176.08 (16) | C21—C20—N3—C19 | 170.87 (12) |
C23—C24—C25—C26 | 0.7 (3) | C37—C20—N3—C17 | 171.32 (11) |
C24—C25—C26—C27 | −0.8 (3) | C30—C20—N3—C17 | −75.55 (14) |
C25—C26—C27—C28 | −0.2 (3) | C21—C20—N3—C17 | 43.38 (13) |
C26—C27—C28—O2 | −177.88 (15) | C27—C28—O2—C29 | −158.75 (14) |
C26—C27—C28—C23 | 1.3 (3) | C23—C28—O2—C29 | 22.10 (19) |
C24—C23—C28—O2 | 177.82 (14) | C21—C29—O2—C28 | −55.40 (16) |
C22—C23—C28—O2 | 2.0 (2) | N3—C19—S1—C18 | 13.50 (11) |
C24—C23—C28—C27 | −1.3 (2) | C17—C18—S1—C19 | 16.32 (12) |
Cg is the centroid of the C23–C28 benzene ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
C7—H7···O3 | 0.93 | 2.47 | 3.207 (2) | 136 |
C29—H29A···O3 | 0.97 | 2.45 | 3.074 (2) | 122 |
C17—H17···O3 | 0.98 | 2.52 | 3.091 (2) | 117 |
C38—H38···O1i | 0.93 | 2.40 | 3.226 (2) | 148 |
C1—H1···Cgii | 0.93 | 2.94 | 3.713 (3) | 142 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x+1, −y, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C40H29N3O3S |
Mr | 631.72 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 293 |
a, b, c (Å) | 9.9924 (6), 13.2317 (8), 13.2867 (8) |
α, β, γ (°) | 116.900 (3), 92.325 (2), 98.518 (3) |
V (Å3) | 1537.79 (16) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.15 |
Crystal size (mm) | 0.23 × 0.21 × 0.16 |
Data collection | |
Diffractometer | Bruker APEXII CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.966, 0.976 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 36242, 9612, 6569 |
Rint | 0.029 |
(sin θ/λ)max (Å−1) | 0.725 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.049, 0.154, 1.03 |
No. of reflections | 9612 |
No. of parameters | 424 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.35, −0.23 |
Computer programs: APEX2 (Bruker, 2004), APEX2 and SAINT (Bruker, 2004), SAINT and XPREP (Bruker, 2004), SHELXS97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 2012), SHELXL97 (Sheldrick, 2008) and PLATON (Spek, 2009).
Cg is the centroid of the C23–C28 benzene ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
C7—H7···O3 | 0.93 | 2.47 | 3.207 (2) | 136 |
C29—H29A···O3 | 0.97 | 2.45 | 3.074 (2) | 122 |
C17—H17···O3 | 0.98 | 2.52 | 3.091 (2) | 117 |
C38—H38···O1i | 0.93 | 2.40 | 3.226 (2) | 148 |
C1—H1···Cgii | 0.93 | 2.94 | 3.713 (3) | 142 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x+1, −y, −z+1. |
Acknowledgements
The authors thank Dr Babu Vargheese, SAIF, IIT, Madras, India, for his help with the data collection.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The design and synthesis of glycospiroheterocycles attracts interest because of the synthetic challenges they present and their biological profile against viruses, bacteria and cancer cells (Ferguson et al., 2005). Pyrrolidines, pyrroles and chromenes are common structural motifs in drugs and drug candidates owing to their ability to act as selective glycosidase inhibitors, which are used in the treatment of diabetes, cancer, malaria and viral infections, including AIDS (Kilonda et al., 1995). In view of this biological importance, the crystal structure of the title compound has been determined and the results are presented here.
Fig. 1. shows a displacement ellipsoid plot of (I), with the atom numbering scheme. The pyran ring (O2/C21/C22/C23/C28/C29) adopts a sofa conformation with puckering parameters (Cremer & Pople, 1975), QT = 0.499 (2) Å, θ = 127.1 (2)°, ϕ = 102.3 (2)°. The thiazolidine (S1,N3,C17–C19) ring adopts a twist conformation, with twist about the C17—N3 bond; the puckering parameters q2 = 0.473 (2) Å and ϕ2 = 267.1 (2)°, and asymmetry parameter (Duax et al., 1976) ΔC2[C17—N3] = 2.0 (1) Å. The pyrrolidine (N3/C16/C17/C20/C21) ring adopts an envelope conformation with the N3 (displacement = 0.273 (1) Å) atom as the flap atom and with puckering parameters q2 = 0.4062 (2) Å and ϕ2 = 357.2 (2)°. The pyrazole ring (N1/N2/C7–C9) is essentially planar [maximum deviation = 0.002 (2) Å for atom C8] and the N- and C-bound benzene rings are inclined to this plane [dihedral angles = 4.8 (1) and 39.0 (1)°, respectively] and form a dihedral angle of 34.6 (1)° with each other. The acenapthalene ring system is approximately planar [maximum deviation = -0.058 (2) Å for atom C37] and forms dihedral angles of 85.9 (1)° and 48.5 (1)°, respectively, with the pyrollothiazole and chromene ring systems. The geometric parameters of the title molecule agrees well with those reported for similar structures (Wei et al., 2012; Jagadeesan et al., 2013).
The molecular structure is stabilized by a C7—H7···O3 intramolecular hydrogen bond, forming S(8) ring motif as well as intramolecular C29—H29A···O3 and C17—H17···O3 hydrogen bonds, both forming S(6) ring motifs (Bernstein et al., 1995) (Table 1). In the crystal packing (Fig. 2), the centrosymmetrically related molecules are linked by C38—H38···O1 hydrogen bonds into cyclic centrosymmetric R22(14) dimers. The crystal packing (Fig. 3) is further stabilized by C—H···π(arene) hydrogen bonds, in which atom C1 acts as a hydrogen bond donor via H1, to the C23–C28 benzene ring of a neighbouring molecule (symmetry operation: 1-x, -y, 1-z), thereby generating a cyclic centrosymmetric dimer (Table 1).